Rh4BG372600

Chromatin modification-related protein EAF7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0008569
Physical Location & Seq
Forward (+)
52964331 .. 52965636
1306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG372600.1

Sequence Viewer

Length: 396 bp
ATGAAAGGTGGTGGTGGTGGTGGTGGCGGCAAACCAAGAGAAGAAGAACAAGACGGCATGTCCGTACACTCTCCCTGCAAGGCTCCTCCTTCCTCTGCTTCTTCTCTACCCAAGGAGCAATCACAGGTTGAATTGGAGCTCAGACTGTTAGAAGCTCTTGAAATTTATCCTCCAGTCAAATTGCAAGGCATACATCGTCACTTTGTGCTTTATGGGCTAATGGAGTTCCTGAGGAGAAGCTTTGATCGCAACTTCTCTTCTGACGAGGTTTTGCAATTGCTGGATCGGTTCTATAACTTGGAAATGCTGAAACCAGACGAGGAGGAGATGGACATCTTGAATCATGAGGAAGAATTTAGCTTGCCTCAAAGTTTCTTTGTTAAGGAGGAATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Eaf7

Protein Analysis

131

Amino Acids

14.94

Weight (kDa)

4.76

Isoelectric Point (pI)

86.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Eaf7 PF07904 46 - 118 1e-05 Chromatin modification-related protein EAF7
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 27
AclWI GGATC 1 cut(s) 291
AcsI RAATTY 2 cut(s) 162, 353
AdeI CACNNNGTG 1 cut(s) 205
AfaI GTAC 1 cut(s) 66
AgsI TTSAA 3 cut(s) 131, 161, 340
AhdI GACNNNNNGTC 1 cut(s) 58
AluBI AGCT 4 cut(s) 139, 155, 240, 360
AluI AGCT 4 cut(s) 139, 155, 240, 360
Alw21I GWGCWC 1 cut(s) 141
AlwI GGATC 1 cut(s) 291
ApoI RAATTY 2 cut(s) 162, 353
AxyI CCTNAGG 1 cut(s) 230
BanII GRGCYC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 141
BccI CCATC 1 cut(s) 322
BceAI ACGGC 1 cut(s) 70
BisI GCNGC 1 cut(s) 28
BlsI GCNGC 1 cut(s) 29
BmeRI GACNNNNNGTC 1 cut(s) 58
BmiI GGNNCC 1 cut(s) 84
BpmI CTGGAG 1 cut(s) 156
BsaBI GATNNNNATC 1 cut(s) 332
BsaJI CCNNGG 1 cut(s) 111
Bse1I ACTGG 1 cut(s) 173
Bse21I CCTNAGG 1 cut(s) 230
Bse8I GATNNNNATC 1 cut(s) 332
BseDI CCNNGG 1 cut(s) 111
BseJI GATNNNNATC 1 cut(s) 332
BseMII CTCAG 2 cut(s) 154, 221
BseNI ACTGG 1 cut(s) 173
BseRI GAGGAG 4 cut(s) 75, 247, 335, 338
BsiHKAI GWGCWC 1 cut(s) 141
Bsp1286I GDGCHC 1 cut(s) 141
Bsp143I GATC 2 cut(s) 244, 283
BspACI CCGC 1 cut(s) 27
BspCNI CTCAG 2 cut(s) 153, 222
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 1 cut(s) 84
BspPI GGATC 1 cut(s) 291
BsrI ACTGG 1 cut(s) 173
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 2 cut(s) 244, 283
BssT1I CCWWGG 1 cut(s) 111
Bst4CI ACNGT 1 cut(s) 147
Bst6I CTCTTC 1 cut(s) 262
BstC8I GCNNGC 1 cut(s) 362
BstDEI CTNAG 2 cut(s) 140, 230
BstKTI GATC 2 cut(s) 247, 286
BstMBI GATC 2 cut(s) 244, 283
BstMWI GCNNNNNNNGC 2 cut(s) 214, 246
BstNSI RCATGY 1 cut(s) 61
Bsu36I CCTNAGG 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 362
CciI TCATGA 1 cut(s) 343
Csp6I GTAC 1 cut(s) 65
CviAII CATG 2 cut(s) 58, 344
CviJI RGCY 6 cut(s) 83, 139, 155, 217, 240, 360
CviKI_1 RGCY 6 cut(s) 83, 139, 155, 217, 240, 360
CviQI GTAC 1 cut(s) 65
DdeI CTNAG 2 cut(s) 140, 230
DpnI GATC 2 cut(s) 246, 285
DpnII GATC 2 cut(s) 244, 283
DraIII CACNNNGTG 1 cut(s) 205
DriI GACNNNNNGTC 1 cut(s) 58
Eam1104I CTCTTC 1 cut(s) 262
Eam1105I GACNNNNNGTC 1 cut(s) 58
EarI CTCTTC 1 cut(s) 262
Ecl136II GAGCTC 1 cut(s) 139
Eco130I CCWWGG 1 cut(s) 111
Eco24I GRGCYC 1 cut(s) 141
Eco53kI GAGCTC 1 cut(s) 139
Eco81I CCTNAGG 1 cut(s) 230
EcoICRI GAGCTC 1 cut(s) 139
EcoT14I CCWWGG 1 cut(s) 111
EcoT38I GRGCYC 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 111
FaeI CATG 2 cut(s) 61, 347
FaiI YATR 5 cut(s) 59, 191, 213, 294, 345
FatI CATG 2 cut(s) 57, 343
Fnu4HI GCNGC 1 cut(s) 28
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 1 cut(s) 28
GluI GCNGC 1 cut(s) 28
GsuI CTGGAG 1 cut(s) 156
Hin1II CATG 2 cut(s) 61, 347
HindIII AAGCTT 1 cut(s) 238
HinfI GANTC 2 cut(s) 340, 389
Hpy166II GTNNAC 1 cut(s) 67
Hpy188I TCNGA 2 cut(s) 143, 262
Hpy188III TCNNGA 4 cut(s) 158, 229, 337, 344
Hpy8I GTNNAC 1 cut(s) 67
HpyAV CCTTC 1 cut(s) 99
HpyCH4III ACNGT 1 cut(s) 147
HpyCH4V TGCA 3 cut(s) 78, 184, 274
HpyF10VI GCNNNNNNNGC 2 cut(s) 214, 246
HpyF3I CTNAG 2 cut(s) 140, 230
Hsp92II CATG 2 cut(s) 61, 347
Kzo9I GATC 2 cut(s) 244, 283
LmnI GCTCC 3 cut(s) 88, 115, 136
LpnPI CCDG 6 cut(s) 88, 110, 186, 242, 266, 327
MaeIII GTNAC 1 cut(s) 197
MalI GATC 2 cut(s) 246, 285
MboI GATC 2 cut(s) 244, 283
MboII GAAGA 5 cut(s) 53, 56, 93, 249, 362
MfeI CAATTG 1 cut(s) 275
MhlI GDGCHC 1 cut(s) 141
MluCI AATT 5 cut(s) 131, 162, 179, 275, 353
MseI TTAA 2 cut(s) 381, 394
MunI CAATTG 1 cut(s) 275
MwoI GCNNNNNNNGC 2 cut(s) 214, 246
NdeII GATC 2 cut(s) 244, 283
NlaIII CATG 2 cut(s) 61, 347
NlaIV GGNNCC 1 cut(s) 84
NmuCI GTSAC 1 cut(s) 197
NspI RCATGY 1 cut(s) 61
PagI TCATGA 1 cut(s) 343
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PfeI GAWTC 2 cut(s) 340, 389
PkrI GCNGC 1 cut(s) 29
Psp124BI GAGCTC 1 cut(s) 141
PspN4I GGNNCC 1 cut(s) 84
RsaI GTAC 1 cut(s) 66
RsaNI GTAC 1 cut(s) 65
SacI GAGCTC 1 cut(s) 141
SaqAI TTAA 2 cut(s) 381, 394
SatI GCNGC 1 cut(s) 28
Sau3AI GATC 2 cut(s) 244, 283
SduI GDGCHC 1 cut(s) 141
SetI ASST 7 cut(s) 10, 129, 141, 157, 242, 270, 362
Sse9I AATT 5 cut(s) 131, 162, 179, 275, 353
SsiI CCGC 1 cut(s) 27
SstI GAGCTC 1 cut(s) 141
StyI CCWWGG 1 cut(s) 111
TaaI ACNGT 1 cut(s) 147
TasI AATT 5 cut(s) 131, 162, 179, 275, 353
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 2 cut(s) 340, 389
Tru1I TTAA 2 cut(s) 381, 394
Tru9I TTAA 2 cut(s) 381, 394
TseFI GTSAC 1 cut(s) 197
Tsp45I GTSAC 1 cut(s) 197
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 52
XapI RAATTY 2 cut(s) 162, 353
XceI RCATGY 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.