pycom16g05420

Chromatin modification-related protein EAF7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0008569
Physical Location & Seq
Forward (+)
3511055 .. 3512752
1698 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g05420.4

Sequence Viewer

Length: 387 bp
ATGGAAAGGAGTGGTGGCAACGGCAGAGAGGAAGAGGAACAAGACGGCATGTCCGTACACTCTCCTTGCAAACCTCCCCCTTCCTCTGCTTCTTCTCTCCTAAAGGAGGAATCACAGGTTGAATTGGAGCTCAAACTGTTAGAAGCTATTGAAATTTACCCTCCCGGAAAATTAAAAGGCGTACATCGCCATTTCGTGCTTTATGGTTTAATGGAATTTCTTCGAAGAAGCTTTGATCGACACTTCTCTGCTGACGAGGTTCTGCAGTTGCTAGAGAGGTTCTATAACTTGGAAATGCTGAAACCAGACGACGAGGAGATGGATTTCCTGAATCGCGAGGAAGAGTTTTGCCTGCCTCAAAATTTCTTCGTCAAGGAAGAACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Eaf7

Protein Analysis

129

Amino Acids

14.99

Weight (kDa)

4.69

Isoelectric Point (pI)

71.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 336
AcsI RAATTY 3 cut(s) 153, 215, 361
AfaI GTAC 2 cut(s) 57, 183
AfiI CCNNNNNNNGG 1 cut(s) 106
AgsI TTSAA 2 cut(s) 122, 152
AhdI GACNNNNNGTC 1 cut(s) 49
AluBI AGCT 3 cut(s) 130, 146, 231
AluI AGCT 3 cut(s) 130, 146, 231
Alw21I GWGCWC 1 cut(s) 132
ApoI RAATTY 3 cut(s) 153, 215, 361
Asp700I GAANNNNTTC 1 cut(s) 219
AsuC2I CCSGG 1 cut(s) 165
AsuII TTCGAA 1 cut(s) 223
BanII GRGCYC 1 cut(s) 132
Bbv12I GWGCWC 1 cut(s) 132
BccI CCATC 1 cut(s) 313
BceAI ACGGC 2 cut(s) 37, 61
BcnI CCSGG 1 cut(s) 165
BfaI CTAG 1 cut(s) 272
BfmI CTRYAG 1 cut(s) 263
Bme1390I CCNGG 1 cut(s) 165
BmeRI GACNNNNNGTC 1 cut(s) 49
BmrFI CCNGG 1 cut(s) 165
Bpu14I TTCGAA 1 cut(s) 223
BpuMI CCSGG 1 cut(s) 165
Bsc4I CCNNNNNNNGG 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 106
BseRI GAGGAG 1 cut(s) 329
Bsh1236I CGCG 1 cut(s) 336
BsiHKAI GWGCWC 1 cut(s) 132
BsiSI CCGG 1 cut(s) 165
BslI CCNNNNNNNGG 1 cut(s) 106
Bsp119I TTCGAA 1 cut(s) 223
Bsp1286I GDGCHC 1 cut(s) 132
Bsp143I GATC 1 cut(s) 235
Bsp68I TCGCGA 1 cut(s) 336
BspFNI CGCG 1 cut(s) 336
BspMAI CTGCAG 1 cut(s) 267
BspT104I TTCGAA 1 cut(s) 223
BssMI GATC 1 cut(s) 235
Bst4CI ACNGT 1 cut(s) 138
Bst6I CTCTTC 2 cut(s) 27, 336
BstBI TTCGAA 1 cut(s) 223
BstC8I GCNNGC 1 cut(s) 353
BstENI CCTNNNNNAGG 1 cut(s) 104
BstFNI CGCG 1 cut(s) 336
BstKTI GATC 1 cut(s) 238
BstMBI GATC 1 cut(s) 235
BstMWI GCNNNNNNNGC 1 cut(s) 186
BstNSI RCATGY 1 cut(s) 52
BstSCI CCNGG 1 cut(s) 163
BstSFI CTRYAG 1 cut(s) 263
BstUI CGCG 1 cut(s) 336
BtgZI GCGATG 1 cut(s) 170
BtuMI TCGCGA 1 cut(s) 336
Cac8I GCNNGC 1 cut(s) 353
Csp6I GTAC 2 cut(s) 56, 182
CviAII CATG 1 cut(s) 49
CviJI RGCY 3 cut(s) 130, 146, 231
CviKI_1 RGCY 3 cut(s) 130, 146, 231
CviQI GTAC 2 cut(s) 56, 182
DpnI GATC 1 cut(s) 237
DpnII GATC 1 cut(s) 235
DriI GACNNNNNGTC 1 cut(s) 49
Eam1104I CTCTTC 2 cut(s) 27, 336
Eam1105I GACNNNNNGTC 1 cut(s) 49
EarI CTCTTC 2 cut(s) 27, 336
Ecl136II GAGCTC 1 cut(s) 130
Eco24I GRGCYC 1 cut(s) 132
Eco53kI GAGCTC 1 cut(s) 130
EcoICRI GAGCTC 1 cut(s) 130
EcoNI CCTNNNNNAGG 1 cut(s) 104
EcoT38I GRGCYC 1 cut(s) 132
FaeI CATG 1 cut(s) 52
FaiI YATR 4 cut(s) 50, 204, 285, 385
FatI CATG 1 cut(s) 48
FriOI GRGCYC 1 cut(s) 132
FspBI CTAG 1 cut(s) 272
HapII CCGG 1 cut(s) 165
Hin1II CATG 1 cut(s) 52
HindIII AAGCTT 1 cut(s) 229
HinfI GANTC 2 cut(s) 110, 331
HpaII CCGG 1 cut(s) 165
Hpy166II GTNNAC 1 cut(s) 58
Hpy188III TCNNGA 2 cut(s) 328, 335
Hpy8I GTNNAC 1 cut(s) 58
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 1 cut(s) 90
HpyCH4III ACNGT 1 cut(s) 138
HpyCH4V TGCA 2 cut(s) 69, 265
HpyF10VI GCNNNNNNNGC 1 cut(s) 186
Hsp92II CATG 1 cut(s) 52
Kzo9I GATC 1 cut(s) 235
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 5 cut(s) 101, 178, 318, 341, 365
MaeI CTAG 1 cut(s) 272
MalI GATC 1 cut(s) 237
MboI GATC 1 cut(s) 235
MboII GAAGA 6 cut(s) 44, 84, 212, 237, 353, 358
MhlI GDGCHC 1 cut(s) 132
MluCI AATT 5 cut(s) 122, 153, 170, 215, 361
MroXI GAANNNNTTC 1 cut(s) 219
MseI TTAA 2 cut(s) 173, 209
MspI CCGG 1 cut(s) 165
MspR9I CCNGG 1 cut(s) 165
MvnI CGCG 1 cut(s) 336
MwoI GCNNNNNNNGC 1 cut(s) 186
NciI CCSGG 1 cut(s) 165
NdeII GATC 1 cut(s) 235
NlaIII CATG 1 cut(s) 52
NruI TCGCGA 1 cut(s) 336
NspI RCATGY 1 cut(s) 52
NspV TTCGAA 1 cut(s) 223
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 219
PfeI GAWTC 2 cut(s) 110, 331
PfoI TCCNGGA 1 cut(s) 163
Psp124BI GAGCTC 1 cut(s) 132
PstI CTGCAG 1 cut(s) 267
RruI TCGCGA 1 cut(s) 336
RsaI GTAC 2 cut(s) 57, 183
RsaNI GTAC 2 cut(s) 56, 182
SacI GAGCTC 1 cut(s) 132
SaqAI TTAA 2 cut(s) 173, 209
Sau3AI GATC 1 cut(s) 235
ScrFI CCNGG 1 cut(s) 165
SduI GDGCHC 1 cut(s) 132
SetI ASST 7 cut(s) 76, 120, 132, 148, 233, 261, 281
SfcI CTRYAG 1 cut(s) 263
SfuI TTCGAA 1 cut(s) 223
Sse9I AATT 5 cut(s) 122, 153, 170, 215, 361
SspMI CTAG 1 cut(s) 272
SstI GAGCTC 1 cut(s) 132
StyD4I CCNGG 1 cut(s) 163
TaaI ACNGT 1 cut(s) 138
TaqI TCGA 2 cut(s) 223, 238
TasI AATT 5 cut(s) 122, 153, 170, 215, 361
TfiI GAWTC 2 cut(s) 110, 331
Tru1I TTAA 2 cut(s) 173, 209
Tru9I TTAA 2 cut(s) 173, 209
TspGWI ACGGA 1 cut(s) 43
XagI CCTNNNNNAGG 1 cut(s) 104
XapI RAATTY 3 cut(s) 153, 215, 361
XceI RCATGY 1 cut(s) 52
XmnI GAANNNNTTC 1 cut(s) 219
XspI CTAG 1 cut(s) 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.