AT1G50310
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
18635955 .. 18638449
2495 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G50310.2

Sequence Viewer

Length: 1554 bp
ATGGCTGGAGGAGCCTTTGTATCAGAAGGTGGTGGTGGAGGAAACAGCTATGAAGGCGGAGTCACCGTCTTTGTCATCATGACATGTATTGTGGCCGCTATGGGAGGTCTCCTCTTTGGTTATGACCTCGGTATCTCAGGTGGAGTGACATCTATGGAGGAGTTTCTGAGCAAGTTTTTCCCGGAGGTGGATAAGCAAATGCACGAAGCAAGGCGCGAGACTGCTTACTGCAAATTCGATAACCAATTGCTACAGTTGTTCACTTCCTCACTCTACCTCGCGGCACTCGCGTCTTCCTTTGTAGCTTCGGCTGTCACAAGGAAGTACGGACGCAAAATCTCCATGTTTGTTGGAGGGGTTGCTTTCCTCATAGGTTCTCTATTCAACGCATTTGCTACCAATGTCGCAATGCTCATCGTTGGTAGATTGTTGCTCGGAGTCGGTGTTGGATTTGCCAATCAGTCTACGCCTGTTTATCTCTCGGAGATGGCTCCAGCGAAGATCCGAGGAGCACTTAACATCGGGTTTCAAATGGCTATAACCATCGGGATTTTGATTGCAAACTTAATCAACTACGGAACATCTCAAATGGCTAAGAACGGATGGAGAGTATCATTGGGTTTAGCCGCTGTACCGGCAGTTATTATGGTTATTGGATCTTTTGTCTTGCCCGATACACCAAACTCGATGCTCGAGAGAGGCAAGTACGAACAAGCGAGAGAGATGTTGCAAAAGATTCGTGGAGCTGATAACGTAGATGAGGAGTTTCAAGATCTGTGTGATGCTTGTGAGGCTGCTAAGAAAGTGGATAATCCATGGAAGAACATTTTCCAACAGGCAAAATACAGACCCGCTCTTGTTTTCTGTTCTGCGATTCCTTTCTTCCAACAGATTACTGGTATCAATGTTATCATGTTCTACGCCCCCGTTCTCTTTAAGACTCTCGGTTTTGCGGATGATGCCTCGCTCATCTCAGCGGTTATTACGGGTGCGGTCAATGTTGTCTCTACCCTTGTCTCCATCTATGCGGTTGACAGGTACGGAAGAAGGATTCTCTTCCTTGAAGGAGGCATCCAAATGATTGTTTCCCAGATCGTTGTTGGTACCTTGATTGGTATGAAGTTTGGAACCACGGGATCAGGGACCTTAACACCTGCAACAGCAGATTGGATCCTGGCTTTCATATGTTTGTATGTTGCAGGATTTGCATGGTCATGGGGTCCATTAGGATGGTTAGTACCAAGTGAGATCTGTCCATTGGAAATCAGACCAGCGGGACAAGCCATCAACGTCTCTGTCAACATGTTCTTCACTTTCCTCATTGGACAGTTTTTCCTCACGATGCTTTGCCACATGAAGTTTGGTCTCTTCTACTTCTTTGGAGGAATGGTTGCAGTCATGACCGTCTTCATCTACTTCTTGTTGCCGGAGACAAAAGGGGTTCCAATTGAAGAAATGGGAAGAGTATGGAAGCAACATCCGTTCTGGAAACGTTACATGCCAGATGATGCTGTTATTGGAGGAGGTGAAGAAAACTACGTCAAGGAGGTTTGA

Protein Analysis

517

Amino Acids

56.28

Weight (kDa)

6.37

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 11 - 347 1.3e-101 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1162
Acc36I ACCTGC 1 cut(s) 1162
Acc65I GGTACC 1 cut(s) 1103
AccB1I GGYRCC 1 cut(s) 1103
AccBSI CCGCTC 1 cut(s) 854
AccI GTMKAC 1 cut(s) 464
AccII CGCG 3 cut(s) 216, 281, 290
AclI AACGTT 1 cut(s) 1492
AclWI GGATC 5 cut(s) 496, 664, 1144, 1165, 1178
AcoI YGGCCR 1 cut(s) 93
AcsI RAATTY 1 cut(s) 233
AfaI GTAC 6 cut(s) 326, 633, 707, 1040, 1105, 1239
AfiI CCNNNNNNNGG 1 cut(s) 187
AflIII ACRYGT 2 cut(s) 83, 1302
AgsI TTSAA 5 cut(s) 385, 530, 770, 1064, 1451
AjnI CCWGG 1 cut(s) 1173
AluBI AGCT 3 cut(s) 48, 305, 746
AluI AGCT 3 cut(s) 48, 305, 746
Alw21I GWGCWC 1 cut(s) 514
Alw26I GTCTC 7 cut(s) 113, 212, 1009, 1021, 1297, 1370, 1424
AlwI GGATC 5 cut(s) 496, 664, 1144, 1165, 1178
Ama87I CYCGRG 1 cut(s) 692
AoxI GGCC 1 cut(s) 93
ApeKI GCWGC 1 cut(s) 794
ApoI RAATTY 1 cut(s) 233
Asp700I GAANNNNTTC 1 cut(s) 827
Asp718I GGTACC 1 cut(s) 1103
AspLEI GCGC 1 cut(s) 216
AspS9I GGNCC 2 cut(s) 1143, 1220
AsuC2I CCSGG 1 cut(s) 182
AsuHPI GGTGA 2 cut(s) 55, 1538
AvaI CYCGRG 1 cut(s) 692
AvaII GGWCC 2 cut(s) 1143, 1220
BaeI ACNNNNGTAYC 2 cut(s) 115, 148
BamHI GGATCC 1 cut(s) 1170
BanI GGYRCC 1 cut(s) 1103
BbsI GAAGAC 2 cut(s) 285, 1399
Bbv12I GWGCWC 1 cut(s) 514
BbvI GCAGC 1 cut(s) 781
BccI CCATC 6 cut(s) 481, 551, 597, 1028, 1224, 1292
BcgI CGANNNNNNTGC 2 cut(s) 719, 753
BciT130I CCWGG 1 cut(s) 1175
BcnI CCSGG 1 cut(s) 182
BcoDI GTCTC 7 cut(s) 113, 212, 1009, 1021, 1297, 1370, 1424
BfmI CTRYAG 1 cut(s) 251
BfuAI ACCTGC 1 cut(s) 1162
BglII AGATCT 2 cut(s) 772, 1248
BisI GCNGC 4 cut(s) 96, 282, 627, 795
BlsI GCNGC 4 cut(s) 97, 283, 628, 796
Bme1390I CCNGG 2 cut(s) 182, 1175
Bme18I GGWCC 2 cut(s) 1143, 1220
BmeT110I CYCGRG 1 cut(s) 692
BmgT120I GGNCC 2 cut(s) 1143, 1220
BmiI GGNNCC 8 cut(s) 13, 492, 1105, 1129, 1144, 1172, 1221, 1443
BmrFI CCNGG 2 cut(s) 182, 1175
BmsI GCATC 6 cut(s) 678, 772, 949, 1080, 1332, 1498
BpiI GAAGAC 2 cut(s) 285, 1399
BplI GAGNNNNNCTC 2 cut(s) 96, 128
BpmI CTGGAG 2 cut(s) 27, 477
BpuMI CCSGG 1 cut(s) 182
BsaI GGTCTC 2 cut(s) 113, 1370
BsaJI CCNNGG 4 cut(s) 127, 505, 815, 1131
BsaXI ACNNNNNCTCC 7 cut(s) 33, 51, 81, 429, 459, 1374, 1404
Bsc4I CCNNNNNNNGG 1 cut(s) 187
Bse118I RCCGGY 1 cut(s) 634
Bse1I ACTGG 1 cut(s) 901
Bse3DI GCAATG 1 cut(s) 414
BseBI CCWGG 1 cut(s) 1175
BseDI CCNNGG 4 cut(s) 127, 505, 815, 1131
BseGI GGATG 5 cut(s) 608, 961, 1071, 1235, 1477
BseLI CCNNNNNNNGG 1 cut(s) 187
BseMI GCAATG 1 cut(s) 414
BseMII CTCAG 3 cut(s) 150, 158, 987
BseNI ACTGG 1 cut(s) 901
BseRI GAGGAG 6 cut(s) 24, 101, 173, 522, 776, 1536
BseXI GCAGC 1 cut(s) 781
Bsh1236I CGCG 3 cut(s) 216, 281, 290
BshFI GGCC 1 cut(s) 95
BshNI GGYRCC 1 cut(s) 1103
BsiHKAI GWGCWC 1 cut(s) 514
BsiHKCI CYCGRG 1 cut(s) 692
BsiSI CCGG 3 cut(s) 182, 635, 1427
BslFI GGGAC 2 cut(s) 1156, 1290
BslI CCNNNNNNNGG 1 cut(s) 187
BsmAI GTCTC 7 cut(s) 113, 212, 1009, 1021, 1297, 1370, 1424
BsmBI CGTCTC 1 cut(s) 1297
BsmFI GGGAC 2 cut(s) 1156, 1290
BsnI GGCC 1 cut(s) 95
Bso31I GGTCTC 2 cut(s) 113, 1370
BsoBI CYCGRG 1 cut(s) 692
Bsp1286I GDGCHC 1 cut(s) 514
Bsp143I GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
Bsp19I CCATGG 1 cut(s) 815
BspANI GGCC 1 cut(s) 95
BspCNI CTCAG 3 cut(s) 149, 159, 986
BspFNI CGCG 3 cut(s) 216, 281, 290
BspHI TCATGA 2 cut(s) 78, 1398
BspLI GGNNCC 8 cut(s) 13, 492, 1105, 1129, 1144, 1172, 1221, 1443
BspMI ACCTGC 1 cut(s) 1162
BspPI GGATC 5 cut(s) 496, 664, 1144, 1165, 1178
BspT107I GGYRCC 1 cut(s) 1103
BspTNI GGTCTC 2 cut(s) 113, 1370
BsrBI CCGCTC 1 cut(s) 854
BsrDI GCAATG 1 cut(s) 414
BsrFI RCCGGY 1 cut(s) 634
BsrI ACTGG 1 cut(s) 901
BssAI RCCGGY 1 cut(s) 634
BssECI CCNNGG 4 cut(s) 127, 505, 815, 1131
BssMI GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
BssT1I CCWWGG 1 cut(s) 815
Bst2UI CCWGG 1 cut(s) 1175
Bst4CI ACNGT 4 cut(s) 67, 255, 1329, 1405
Bst6I CTCTTC 3 cut(s) 1061, 1373, 1456
BstAPI GCANNNNNTGC 1 cut(s) 1205
BstDEI CTNAG 5 cut(s) 136, 167, 594, 798, 973
BstDSI CCRYGG 2 cut(s) 815, 1131
BstF5I GGATG 5 cut(s) 608, 961, 1071, 1235, 1477
BstFNI CGCG 3 cut(s) 216, 281, 290
BstHHI GCGC 1 cut(s) 216
BstKTI GATC 7 cut(s) 504, 659, 775, 1095, 1139, 1173, 1251
BstMAI GTCTC 7 cut(s) 113, 212, 1009, 1021, 1297, 1370, 1424
BstMBI GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
BstMWI GCNNNNNNNGC 8 cut(s) 11, 54, 287, 635, 791, 959, 1205, 1280
BstNI CCWGG 1 cut(s) 1175
BstNSI RCATGY 3 cut(s) 87, 1306, 1501
BstSCI CCNGG 2 cut(s) 180, 1173
BstSFI CTRYAG 1 cut(s) 251
BstUI CGCG 3 cut(s) 216, 281, 290
BstV1I GCAGC 1 cut(s) 781
BstV2I GAAGAC 2 cut(s) 285, 1399
BstX2I RGATCY 5 cut(s) 501, 656, 772, 1170, 1248
BstXI CCANNNNNNTGG 1 cut(s) 1230
BstYI RGATCY 5 cut(s) 501, 656, 772, 1170, 1248
BsuRI GGCC 1 cut(s) 95
BtgI CCRYGG 2 cut(s) 815, 1131
BtsCI GGATG 5 cut(s) 608, 961, 1071, 1235, 1477
BveI ACCTGC 1 cut(s) 1162
CciI TCATGA 2 cut(s) 78, 1398
CfoI GCGC 1 cut(s) 216
Cfr10I RCCGGY 1 cut(s) 634
Cfr13I GGNCC 2 cut(s) 1143, 1220
CseI GACGC 2 cut(s) 279, 339
Csp6I GTAC 6 cut(s) 325, 632, 706, 1039, 1104, 1238
CviQI GTAC 6 cut(s) 325, 632, 706, 1039, 1104, 1238
DdeI CTNAG 5 cut(s) 136, 167, 594, 798, 973
DpnI GATC 7 cut(s) 503, 658, 774, 1094, 1138, 1172, 1250
DpnII GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
EaeI YGGCCR 1 cut(s) 93
Eam1104I CTCTTC 3 cut(s) 1061, 1373, 1456
EarI CTCTTC 3 cut(s) 1061, 1373, 1456
EciI GGCGGA 1 cut(s) 72
Eco130I CCWWGG 1 cut(s) 815
Eco31I GGTCTC 2 cut(s) 113, 1370
Eco47I GGWCC 2 cut(s) 1143, 1220
Eco88I CYCGRG 1 cut(s) 692
EcoO109I RGGNCCY 1 cut(s) 1143
EcoRII CCWGG 1 cut(s) 1173
EcoT14I CCWWGG 1 cut(s) 815
ErhI CCWWGG 1 cut(s) 815
Esp3I CGTCTC 1 cut(s) 1297
FaqI GGGAC 2 cut(s) 1156, 1290
FauI CCCGC 2 cut(s) 859, 1267
FauNDI CATATG 1 cut(s) 1184
FblI GTMKAC 1 cut(s) 464
Fnu4HI GCNGC 4 cut(s) 96, 282, 627, 795
FokI GGATG 5 cut(s) 615, 968, 1058, 1242, 1464
Fsp4HI GCNGC 4 cut(s) 96, 282, 627, 795
GlaI GCGC 1 cut(s) 215
GluI GCNGC 4 cut(s) 96, 282, 627, 795
GsuI CTGGAG 2 cut(s) 27, 477
HaeIII GGCC 1 cut(s) 95
HapII CCGG 3 cut(s) 182, 635, 1427
HgaI GACGC 2 cut(s) 279, 339
HhaI GCGC 1 cut(s) 216
Hin6I GCGC 1 cut(s) 214
HinP1I GCGC 1 cut(s) 214
HincII GTYRAC 2 cut(s) 1033, 1300
HindII GTYRAC 2 cut(s) 1033, 1300
HinfI GANTC 6 cut(s) 60, 438, 736, 874, 940, 1051
HpaII CCGG 3 cut(s) 182, 635, 1427
HphI GGTGA 2 cut(s) 55, 1538
Hpy166II GTNNAC 4 cut(s) 261, 465, 1033, 1300
Hpy188I TCNGA 6 cut(s) 25, 168, 437, 484, 506, 1268
Hpy188III TCNNGA 7 cut(s) 79, 547, 694, 770, 1339, 1399, 1486
Hpy8I GTNNAC 4 cut(s) 261, 465, 1033, 1300
HpyAV CCTTC 4 cut(s) 20, 47, 1041, 1058
HpyCH4III ACNGT 4 cut(s) 67, 255, 1329, 1405
HpyCH4IV ACGT 4 cut(s) 753, 1290, 1492, 1539
HpyCH4V TGCA 8 cut(s) 202, 231, 560, 730, 1157, 1199, 1208, 1394
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 54, 287, 635, 791, 959, 1205, 1280
HpyF3I CTNAG 5 cut(s) 136, 167, 594, 798, 973
HpySE526I ACGT 4 cut(s) 753, 1290, 1492, 1539
HspAI GCGC 1 cut(s) 214
KpnI GGTACC 1 cut(s) 1107
Kzo9I GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
LmnI GCTCC 4 cut(s) 11, 496, 509, 743
Lsp1109I GCAGC 1 cut(s) 781
LweI GCATC 6 cut(s) 678, 772, 949, 1080, 1332, 1498
MaeII ACGT 4 cut(s) 753, 1290, 1492, 1539
MaeIII GTNAC 4 cut(s) 61, 145, 313, 1493
MalI GATC 7 cut(s) 503, 658, 774, 1094, 1138, 1172, 1250
MbiI CCGCTC 1 cut(s) 854
MboI GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
MfeI CAATTG 2 cut(s) 245, 1446
MflI RGATCY 5 cut(s) 501, 656, 772, 1170, 1248
MhlI GDGCHC 1 cut(s) 514
MluCI AATT 3 cut(s) 233, 245, 1446
MlyI GAGTC 3 cut(s) 69, 447, 934
MmeI TCCRAC 4 cut(s) 331, 427, 856, 910
MroXI GAANNNNTTC 1 cut(s) 827
MseI TTAA 4 cut(s) 516, 566, 936, 1148
MslI CAYNNNNRTG 3 cut(s) 1076, 1213, 1228
MspA1I CMGCKG 3 cut(s) 629, 977, 1274
MspI CCGG 3 cut(s) 182, 635, 1427
MspR9I CCNGG 2 cut(s) 182, 1175
MunI CAATTG 2 cut(s) 245, 1446
MvaI CCWGG 1 cut(s) 1175
MvnI CGCG 3 cut(s) 216, 281, 290
MwoI GCNNNNNNNGC 8 cut(s) 11, 54, 287, 635, 791, 959, 1205, 1280
NciI CCSGG 1 cut(s) 182
NcoI CCATGG 1 cut(s) 815
NdeI CATATG 1 cut(s) 1184
NdeII GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
NlaIV GGNNCC 8 cut(s) 13, 492, 1105, 1129, 1144, 1172, 1221, 1443
NmuCI GTSAC 3 cut(s) 61, 145, 313
NspI RCATGY 3 cut(s) 87, 1306, 1501
PaeR7I CTCGAG 1 cut(s) 692
PagI TCATGA 2 cut(s) 78, 1398
PaqCI CACCTGC 1 cut(s) 1162
PciI ACATGT 2 cut(s) 83, 1302
PdmI GAANNNNTTC 1 cut(s) 827
PfeI GAWTC 3 cut(s) 736, 874, 1051
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 4 cut(s) 97, 283, 628, 796
PleI GAGTC 3 cut(s) 68, 446, 934
PpsI GAGTC 3 cut(s) 68, 446, 934
PpuMI RGGWCCY 1 cut(s) 1143
PscI ACATGT 2 cut(s) 83, 1302
Psp1406I AACGTT 1 cut(s) 1492
Psp5II RGGWCCY 1 cut(s) 1143
Psp6I CCWGG 1 cut(s) 1173
PspGI CCWGG 1 cut(s) 1173
PspN4I GGNNCC 8 cut(s) 13, 492, 1105, 1129, 1144, 1172, 1221, 1443
PspPI GGNCC 2 cut(s) 1143, 1220
PspPPI RGGWCCY 1 cut(s) 1143
PsuI RGATCY 5 cut(s) 501, 656, 772, 1170, 1248
RsaI GTAC 6 cut(s) 326, 633, 707, 1040, 1105, 1239
RsaNI GTAC 6 cut(s) 325, 632, 706, 1039, 1104, 1238
RseI CAYNNNNRTG 3 cut(s) 1076, 1213, 1228
SaqAI TTAA 4 cut(s) 516, 566, 936, 1148
SatI GCNGC 4 cut(s) 96, 282, 627, 795
Sau3AI GATC 7 cut(s) 501, 656, 772, 1092, 1136, 1170, 1248
Sau96I GGNCC 2 cut(s) 1143, 1220
SchI GAGTC 3 cut(s) 69, 447, 934
ScrFI CCNGG 2 cut(s) 182, 1175
SduI GDGCHC 1 cut(s) 514
SfaNI GCATC 6 cut(s) 678, 772, 949, 1080, 1332, 1498
SfcI CTRYAG 1 cut(s) 251
Sfr274I CTCGAG 1 cut(s) 692
SinI GGWCC 2 cut(s) 1143, 1220
SlaI CTCGAG 1 cut(s) 692
SmiMI CAYNNNNRTG 3 cut(s) 1076, 1213, 1228
SmlI CTYRAG 1 cut(s) 692
SmoI CTYRAG 1 cut(s) 692
Sse9I AATT 3 cut(s) 233, 245, 1446
StyD4I CCNGG 2 cut(s) 180, 1173
StyI CCWWGG 1 cut(s) 815
TaaI ACNGT 4 cut(s) 67, 255, 1329, 1405
TaiI ACGT 4 cut(s) 756, 1293, 1495, 1542
TaqI TCGA 3 cut(s) 237, 686, 693
TasI AATT 3 cut(s) 233, 245, 1446
TauI GCSGC 3 cut(s) 98, 284, 629
TfiI GAWTC 3 cut(s) 736, 874, 1051
Tru1I TTAA 4 cut(s) 516, 566, 936, 1148
Tru9I TTAA 4 cut(s) 516, 566, 936, 1148
TseFI GTSAC 3 cut(s) 61, 145, 313
TseI GCWGC 1 cut(s) 794
Tsp45I GTSAC 3 cut(s) 61, 145, 313
TspDTI ATGAA 5 cut(s) 66, 1133, 1171, 1370, 1399
TspGWI ACGGA 5 cut(s) 342, 591, 615, 1056, 1470
VpaK11BI GGWCC 2 cut(s) 1143, 1220
XapI RAATTY 1 cut(s) 233
XceI RCATGY 3 cut(s) 87, 1306, 1501
XcmI CCANNNNNNNNNTGG 3 cut(s) 893, 1097, 1358
XhoI CTCGAG 1 cut(s) 692
XmiI GTMKAC 1 cut(s) 464
XmnI GAANNNNTTC 1 cut(s) 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.