AT5G23270
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
7838863 .. 7841077
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G23270.1

Sequence Viewer

Length: 1545 bp
ATGGCAGGAGGGGCATTTATAGACGAGAGTGGCCATGGAGGAGACTACGAAGGTCGTGTAACCGCGTTTGTCATGATAACCTGCATTGTAGCTGCAATGGGTGGTCTCCTCTTTGGTTACGACATTGGTATCTCAGGAGGAGTGATATCAATGGAGGACTTTCTAACGAAATTCTTCCCTGACGTGCTTCGTCAAATGCAAAACAAAAGAGGGCGTGAAACAGAATATTGTAAATATGACAATGAGCTTCTTACTCTCTTCACTTCCTCTCTTTACCTCGCTGCTTTGTTCGCTTCTTTCCTTGCCTCCACCATTACAAGGCTTTTTGGCCGGAAGGTCTCAATGGTTATCGGGTCTCTCGCTTTTCTCTCTGGAGCTCTTCTCAACGGTTTAGCTATCAACCTCGAGATGTTGATCATCGGGCGGTTATTTCTCGGTGTAGGTGTCGGATTCGCTAACCAATCTGTTCCTCTTTACCTCTCTGAGATGGCTCCTGCTAAGATCAGAGGAGCTCTCAACATTGGTTTTCAATTAGCAATCACGATCGGGATCTTAGCCGCGAACATTGTCAATTACGTGACCCCAAAGCTCCAGAACGGGATCGGATGGAGATTATCTCTCGGTTTAGCTGGAGTTCCGGCCGTTATGATGCTTGTCGGATGCTTTTTCTTGCCAGATACGCCAAACTCAATCCTTGAACGTGGAAACAAAGAAAAGGCTAAGGAGATGCTGCAGAAGATCAGAGGAACCATGGAGGTTGAGCATGAGTTTAATGAACTTTGCAACGCGTGTGAAGCCGCGAAGAAAGTTAAGCATCCATGGACGAACATAATGCAAGCTCGTTATCGACCGCAGCTCACGTTTTGTACCTTCATCCCATTCTTCCAGCAGCTAACCGGGATCAATGTCATTATGTTCTATGCACCTGTTCTGTTTAAGACCATCGGTTTTGGAAATGACGCCTCTCTCATATCCGCAGTTATCACCGGTCTTGTCAATGTCCTTTCCACCATTGTCTCCATCTACTCCGTTGACAAATTCGGACGAAGAGCTTTGTTTCTTCAAGGTGGTTTTCAGATGATCGTGACCCAGATCGCGGTCGGGTCGATGATCGGATGGAAATTTGGATTCAACGGGGAAGGAAATTTGTCAGGGGTTGATGCGGATATAATCTTGGCACTGATATGTCTCTATGTGGCGGGTTTCGCGTGGTCATGGGGACCGTTGGGATGGTTAGTGCCGAGTGAGATATGTCCATTGGAAATTAGATCAGCAGGACAATCGTTAAACGTTTCGGTGAACATGTTCTTTACATTCTTCATTGGACAATTCTTCTTGACGATGCTTTGCCATATGAAGTTTGGTTTGTTCTATTTCTTCGCGGGTATGGTCTTGATCATGACCATTTTCATTTACTTCTTGTTGCCGGAGACAAAAGGTGTTCCGATTGAGGAGATGGGGAAAGTGTGGAAAGAGCATAGATATTGGGGGAAATATAGTAATAATGATGATGGTGATGATGTTGATGATGATGCTTATTTTTAG

Protein Analysis

514

Amino Acids

56.72

Weight (kDa)

6.04

Isoelectric Point (pI)

28.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 28 - 490 9e-127 Sugar (and other) transporter
MFS_1 PF07690 79 - 437 2e-23 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 89
AccII CGCG 7 cut(s) 65, 560, 788, 800, 1097, 1208, 1382
AclI AACGTT 1 cut(s) 1290
AclWI GGATC 3 cut(s) 557, 608, 908
AcoI YGGCCR 3 cut(s) 31, 328, 639
AcsI RAATTY 4 cut(s) 170, 1037, 1121, 1144
AcyI GRCGYC 1 cut(s) 960
AfaI GTAC 1 cut(s) 868
AfiI CCNNNNNNNGG 2 cut(s) 318, 1096
AflIII ACRYGT 2 cut(s) 786, 1302
AgeI ACCGGT 1 cut(s) 986
AgsI TTSAA 4 cut(s) 530, 698, 1064, 1132
AjiI CACGTC 1 cut(s) 184
Alw21I GWGCWC 2 cut(s) 379, 514
Alw26I GTCTC 7 cut(s) 36, 110, 343, 360, 1021, 1193, 1424
AlwI GGATC 3 cut(s) 557, 608, 908
Ama87I CYCGRG 1 cut(s) 404
AoxI GGCC 3 cut(s) 31, 328, 639
ApeKI GCWGC 5 cut(s) 92, 281, 730, 853, 889
ApoI RAATTY 4 cut(s) 170, 1037, 1121, 1144
AsiGI ACCGGT 1 cut(s) 986
Asp700I GAANNNNTTC 2 cut(s) 173, 1304
AspS9I GGNCC 1 cut(s) 1220
AsuC2I CCSGG 1 cut(s) 898
AsuHPI GGTGA 3 cut(s) 976, 1309, 1526
AvaI CYCGRG 1 cut(s) 404
AvaII GGWCC 1 cut(s) 1220
BaeI ACNNNNGTAYC 2 cut(s) 112, 145
BalI TGGCCA 1 cut(s) 33
BanII GRGCYC 2 cut(s) 379, 514
Bbv12I GWGCWC 2 cut(s) 379, 514
BbvI GCAGC 5 cut(s) 79, 268, 717, 865, 901
BccI CCATC 8 cut(s) 481, 600, 950, 1028, 1110, 1224, 1450, 1505
BceAI ACGGC 1 cut(s) 626
BcgI CGANNNNNNTGC 4 cut(s) 814, 848, 1263, 1297
BclI TGATCA 2 cut(s) 414, 1395
BcnI CCSGG 1 cut(s) 898
BcoDI GTCTC 7 cut(s) 36, 110, 343, 360, 1021, 1193, 1424
BfmI CTRYAG 1 cut(s) 731
BfuAI ACCTGC 1 cut(s) 89
BisI GCNGC 7 cut(s) 93, 282, 558, 731, 798, 854, 890
BlsI GCNGC 7 cut(s) 94, 283, 559, 732, 799, 855, 891
Bme1390I CCNGG 1 cut(s) 898
Bme18I GGWCC 1 cut(s) 1220
BmeT110I CYCGRG 1 cut(s) 404
BmgBI CACGTC 1 cut(s) 184
BmgT120I GGNCC 1 cut(s) 1220
BmiI GGNNCC 3 cut(s) 492, 748, 1221
BmrFI CCNGG 1 cut(s) 898
BmsI GCATC 7 cut(s) 639, 650, 717, 823, 1150, 1332, 1522
BplI GAGNNNNNCTC 6 cut(s) 366, 398, 498, 530, 601, 633
BpmI CTGGAG 3 cut(s) 393, 575, 651
Bpu10I CCTNAGC 1 cut(s) 720
BpuMI CCSGG 1 cut(s) 898
BsaAI YACGTR 1 cut(s) 577
BsaBI GATNNNNATC 2 cut(s) 413, 548
BsaHI GRCGYC 1 cut(s) 960
BsaI GGTCTC 3 cut(s) 110, 343, 360
BsaJI CCNNGG 3 cut(s) 34, 750, 818
BsaWI WCCGGW 1 cut(s) 986
Bsc4I CCNNNNNNNGG 2 cut(s) 318, 1096
Bse118I RCCGGY 1 cut(s) 986
Bse3DI GCAATG 1 cut(s) 102
Bse8I GATNNNNATC 2 cut(s) 413, 548
BseDI CCNNGG 3 cut(s) 34, 750, 818
BseGI GGATG 6 cut(s) 611, 665, 814, 873, 1121, 1235
BseJI GATNNNNATC 2 cut(s) 413, 548
BseLI CCNNNNNNNGG 2 cut(s) 318, 1096
BseMI GCAATG 1 cut(s) 102
BseMII CTCAG 2 cut(s) 147, 474
BseRI GAGGAG 5 cut(s) 54, 98, 153, 522, 1466
BseX3I CGGCCG 1 cut(s) 639
BseXI GCAGC 5 cut(s) 79, 268, 717, 865, 901
Bsh1236I CGCG 7 cut(s) 65, 560, 788, 800, 1097, 1208, 1382
Bsh1285I CGRYCG 4 cut(s) 546, 642, 851, 1101
BshFI GGCC 3 cut(s) 33, 330, 641
BshTI ACCGGT 1 cut(s) 986
BsiEI CGRYCG 4 cut(s) 546, 642, 851, 1101
BsiHKAI GWGCWC 2 cut(s) 379, 514
BsiHKCI CYCGRG 1 cut(s) 404
BsiSI CCGG 5 cut(s) 331, 638, 897, 987, 1427
BslFI GGGAC 1 cut(s) 1233
BslI CCNNNNNNNGG 2 cut(s) 318, 1096
BsmAI GTCTC 7 cut(s) 36, 110, 343, 360, 1021, 1193, 1424
BsmFI GGGAC 1 cut(s) 1233
BsnI GGCC 3 cut(s) 33, 330, 641
Bso31I GGTCTC 3 cut(s) 110, 343, 360
BsoBI CYCGRG 1 cut(s) 404
Bsp1286I GDGCHC 2 cut(s) 379, 514
Bsp19I CCATGG 3 cut(s) 34, 750, 818
BspANI GGCC 3 cut(s) 33, 330, 641
BspCNI CTCAG 2 cut(s) 146, 475
BspFNI CGCG 7 cut(s) 65, 560, 788, 800, 1097, 1208, 1382
BspHI TCATGA 2 cut(s) 72, 1398
BspLI GGNNCC 3 cut(s) 492, 748, 1221
BspMAI CTGCAG 1 cut(s) 735
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 3 cut(s) 557, 608, 908
BspQI GCTCTTC 2 cut(s) 384, 1042
BspTNI GGTCTC 3 cut(s) 110, 343, 360
BsrDI GCAATG 1 cut(s) 102
BsrFI RCCGGY 1 cut(s) 986
BssAI RCCGGY 1 cut(s) 986
BssECI CCNNGG 3 cut(s) 34, 750, 818
BssNI GRCGYC 1 cut(s) 960
BssT1I CCWWGG 3 cut(s) 34, 750, 818
Bst4CI ACNGT 2 cut(s) 389, 1224
Bst6I CTCTTC 3 cut(s) 263, 384, 1042
BstACI GRCGYC 1 cut(s) 960
BstBAI YACGTR 1 cut(s) 577
BstC8I GCNNGC 1 cut(s) 837
BstDEI CTNAG 5 cut(s) 133, 483, 498, 553, 720
BstDSI CCRYGG 3 cut(s) 34, 750, 818
BstF5I GGATG 6 cut(s) 611, 665, 814, 873, 1121, 1235
BstFNI CGCG 7 cut(s) 65, 560, 788, 800, 1097, 1208, 1382
BstMAI GTCTC 7 cut(s) 36, 110, 343, 360, 1021, 1193, 1424
BstMCI CGRYCG 4 cut(s) 546, 642, 851, 1101
BstMWI GCNNNNNNNGC 5 cut(s) 11, 290, 679, 794, 1205
BstNSI RCATGY 1 cut(s) 1306
BstSCI CCNGG 1 cut(s) 896
BstSFI CTRYAG 1 cut(s) 731
BstUI CGCG 7 cut(s) 65, 560, 788, 800, 1097, 1208, 1382
BstV1I GCAGC 5 cut(s) 79, 268, 717, 865, 901
BstX2I RGATCY 1 cut(s) 549
BstYI RGATCY 1 cut(s) 549
BstZI CGGCCG 1 cut(s) 639
BsuRI GGCC 3 cut(s) 33, 330, 641
BtgI CCRYGG 3 cut(s) 34, 750, 818
BtrI CACGTC 1 cut(s) 184
BtsCI GGATG 6 cut(s) 611, 665, 814, 873, 1121, 1235
BtsIMutI CAGTG 1 cut(s) 1178
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 837
CciI TCATGA 2 cut(s) 72, 1398
Cfr10I RCCGGY 1 cut(s) 986
Cfr13I GGNCC 1 cut(s) 1220
CseI GACGC 1 cut(s) 968
Csp6I GTAC 1 cut(s) 867
CspAI ACCGGT 1 cut(s) 986
CviAII CATG 8 cut(s) 35, 73, 751, 764, 819, 1215, 1303, 1399
CviQI GTAC 1 cut(s) 867
DdeI CTNAG 5 cut(s) 133, 483, 498, 553, 720
EaeI YGGCCR 3 cut(s) 31, 328, 639
EagI CGGCCG 1 cut(s) 639
Eam1104I CTCTTC 3 cut(s) 263, 384, 1042
EarI CTCTTC 3 cut(s) 263, 384, 1042
Ecl136II GAGCTC 2 cut(s) 377, 512
EclXI CGGCCG 1 cut(s) 639
Eco130I CCWWGG 3 cut(s) 34, 750, 818
Eco24I GRGCYC 2 cut(s) 379, 514
Eco31I GGTCTC 3 cut(s) 110, 343, 360
Eco32I GATATC 1 cut(s) 147
Eco47I GGWCC 1 cut(s) 1220
Eco52I CGGCCG 1 cut(s) 639
Eco53kI GAGCTC 2 cut(s) 377, 512
Eco88I CYCGRG 1 cut(s) 404
EcoICRI GAGCTC 2 cut(s) 377, 512
EcoRV GATATC 1 cut(s) 147
EcoT14I CCWWGG 3 cut(s) 34, 750, 818
EcoT38I GRGCYC 2 cut(s) 379, 514
ErhI CCWWGG 3 cut(s) 34, 750, 818
FaeI CATG 8 cut(s) 38, 76, 754, 767, 822, 1218, 1306, 1402
FaqI GGGAC 1 cut(s) 1233
FatI CATG 8 cut(s) 34, 72, 750, 763, 818, 1214, 1302, 1398
FauI CCCGC 2 cut(s) 1192, 1375
FauNDI CATATG 1 cut(s) 1353
FbaI TGATCA 2 cut(s) 414, 1395
Fnu4HI GCNGC 7 cut(s) 93, 282, 558, 731, 798, 854, 890
FokI GGATG 6 cut(s) 618, 672, 801, 860, 1128, 1242
FriOI GRGCYC 2 cut(s) 379, 514
Fsp4HI GCNGC 7 cut(s) 93, 282, 558, 731, 798, 854, 890
GluI GCNGC 7 cut(s) 93, 282, 558, 731, 798, 854, 890
GsuI CTGGAG 3 cut(s) 393, 575, 651
HaeIII GGCC 3 cut(s) 33, 330, 641
HapII CCGG 5 cut(s) 331, 638, 897, 987, 1427
HgaI GACGC 1 cut(s) 968
Hin1I GRCGYC 1 cut(s) 960
Hin1II CATG 8 cut(s) 38, 76, 754, 767, 822, 1218, 1306, 1402
HincII GTYRAC 1 cut(s) 1033
HindII GTYRAC 1 cut(s) 1033
HinfI GANTC 2 cut(s) 450, 1128
HpaII CCGG 5 cut(s) 331, 638, 897, 987, 1427
HphI GGTGA 3 cut(s) 976, 1309, 1526
Hpy166II GTNNAC 2 cut(s) 1033, 1300
Hpy8I GTNNAC 2 cut(s) 1033, 1300
HpyAV CCTTC 4 cut(s) 44, 328, 880, 1133
HpyCH4III ACNGT 2 cut(s) 389, 1224
HpyCH4IV ACGT 5 cut(s) 183, 576, 700, 860, 1290
HpyCH4V TGCA 7 cut(s) 84, 95, 199, 733, 783, 835, 923
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 290, 679, 794, 1205
HpyF3I CTNAG 5 cut(s) 133, 483, 498, 553, 720
HpySE526I ACGT 5 cut(s) 183, 576, 700, 860, 1290
Hsp92I GRCGYC 1 cut(s) 960
Hsp92II CATG 8 cut(s) 38, 76, 754, 767, 822, 1218, 1306, 1402
Ksp22I TGATCA 2 cut(s) 414, 1395
LguI GCTCTTC 2 cut(s) 384, 1042
LmnI GCTCC 4 cut(s) 374, 496, 509, 594
Lsp1109I GCAGC 5 cut(s) 79, 268, 717, 865, 901
LweI GCATC 7 cut(s) 639, 650, 717, 823, 1150, 1332, 1522
MaeII ACGT 5 cut(s) 183, 576, 700, 860, 1290
MaeIII GTNAC 4 cut(s) 58, 116, 577, 1084
MflI RGATCY 1 cut(s) 549
MhlI GDGCHC 2 cut(s) 379, 514
MlsI TGGCCA 1 cut(s) 33
MluCI AATT 8 cut(s) 170, 530, 571, 1037, 1121, 1144, 1263, 1328
MluI ACGCGT 1 cut(s) 786
MluNI TGGCCA 1 cut(s) 33
MmeI TCCRAC 2 cut(s) 427, 637
Mox20I TGGCCA 1 cut(s) 33
MroXI GAANNNNTTC 2 cut(s) 173, 1304
MscI TGGCCA 1 cut(s) 33
MseI TTAA 4 cut(s) 771, 810, 936, 1286
MslI CAYNNNNRTG 1 cut(s) 1183
Msp20I TGGCCA 1 cut(s) 33
MspI CCGG 5 cut(s) 331, 638, 897, 987, 1427
MspR9I CCNGG 1 cut(s) 898
MvnI CGCG 7 cut(s) 65, 560, 788, 800, 1097, 1208, 1382
MwoI GCNNNNNNNGC 5 cut(s) 11, 290, 679, 794, 1205
NciI CCSGG 1 cut(s) 898
NcoI CCATGG 3 cut(s) 34, 750, 818
NdeI CATATG 1 cut(s) 1353
NlaIII CATG 8 cut(s) 38, 76, 754, 767, 822, 1218, 1306, 1402
NlaIV GGNNCC 3 cut(s) 492, 748, 1221
NmeAIII GCCGAG 1 cut(s) 1266
NmuCI GTSAC 2 cut(s) 577, 1084
NspI RCATGY 1 cut(s) 1306
PaeR7I CTCGAG 1 cut(s) 404
PagI TCATGA 2 cut(s) 72, 1398
PciI ACATGT 1 cut(s) 1302
PciSI GCTCTTC 2 cut(s) 384, 1042
PdmI GAANNNNTTC 2 cut(s) 173, 1304
PfeI GAWTC 2 cut(s) 450, 1128
PinAI ACCGGT 1 cut(s) 986
PkrI GCNGC 7 cut(s) 94, 283, 559, 732, 799, 855, 891
Ple19I CGATCG 1 cut(s) 546
Ppu21I YACGTR 1 cut(s) 577
PscI ACATGT 1 cut(s) 1302
Psp124BI GAGCTC 2 cut(s) 379, 514
Psp1406I AACGTT 1 cut(s) 1290
PspN4I GGNNCC 3 cut(s) 492, 748, 1221
PspPI GGNCC 1 cut(s) 1220
PstI CTGCAG 1 cut(s) 735
PsuI RGATCY 1 cut(s) 549
PvuI CGATCG 1 cut(s) 546
RsaI GTAC 1 cut(s) 868
RsaNI GTAC 1 cut(s) 867
RseI CAYNNNNRTG 1 cut(s) 1183
SacI GAGCTC 2 cut(s) 379, 514
SapI GCTCTTC 2 cut(s) 384, 1042
SaqAI TTAA 4 cut(s) 771, 810, 936, 1286
SatI GCNGC 7 cut(s) 93, 282, 558, 731, 798, 854, 890
Sau96I GGNCC 1 cut(s) 1220
ScrFI CCNGG 1 cut(s) 898
SduI GDGCHC 2 cut(s) 379, 514
SfaNI GCATC 7 cut(s) 639, 650, 717, 823, 1150, 1332, 1522
SfcI CTRYAG 1 cut(s) 731
Sfr274I CTCGAG 1 cut(s) 404
SinI GGWCC 1 cut(s) 1220
SlaI CTCGAG 1 cut(s) 404
SmiMI CAYNNNNRTG 1 cut(s) 1183
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 8 cut(s) 170, 530, 571, 1037, 1121, 1144, 1263, 1328
SspI AATATT 1 cut(s) 227
SstI GAGCTC 2 cut(s) 379, 514
StyD4I CCNGG 1 cut(s) 896
StyI CCWWGG 3 cut(s) 34, 750, 818
TaaI ACNGT 2 cut(s) 389, 1224
TaiI ACGT 5 cut(s) 186, 579, 703, 863, 1293
TaqI TCGA 3 cut(s) 405, 847, 1106
TasI AATT 8 cut(s) 170, 530, 571, 1037, 1121, 1144, 1263, 1328
TauI GCSGC 2 cut(s) 560, 800
TfiI GAWTC 2 cut(s) 450, 1128
Tru1I TTAA 4 cut(s) 771, 810, 936, 1286
Tru9I TTAA 4 cut(s) 771, 810, 936, 1286
TscAI CASTG 1 cut(s) 1185
TseFI GTSAC 2 cut(s) 577, 1084
TseI GCWGC 5 cut(s) 92, 281, 730, 853, 889
Tsp45I GTSAC 2 cut(s) 577, 1084
TspDTI ATGAA 5 cut(s) 789, 862, 1309, 1370, 1399
TspGWI ACGGA 1 cut(s) 1018
TspRI CASTG 1 cut(s) 1185
VpaK11BI GGWCC 1 cut(s) 1220
XapI RAATTY 4 cut(s) 170, 1037, 1121, 1144
XceI RCATGY 1 cut(s) 1306
XcmI CCANNNNNNNNNTGG 1 cut(s) 1358
XhoI CTCGAG 1 cut(s) 404
XmnI GAANNNNTTC 2 cut(s) 173, 1304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.