Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002419

Physical Location & Seq

Genomic Coordinates Forward (+)

77290679 .. 77293020

Gene Structure 2342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0576400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGCTAATGGCTTCCTTGTCCTCCTTTTCATACTCTCTACTTTTTCTACAGACATTCGTGCATGCAACCAAACTGAACGCAGCTCTCTTCAGTCCTTCGCCCTCACTTTGTCTACTTCGACTCCTCTAAATTGGACTTCCGGTGATTGCTGCCGTTGGGAGGGTATCACTTGTAATCCGGGTGGTTCGGTCACTCATTTGAGCTTACCCTCCAAAGGCCTCAAACCCAAAGGAGGTAATTCTTCTTCTTCATCACTTGAAAATCTCACACATCTCACCCACTTTAACCTCTCCCATAATTCACTTTATGGTTCGCTAGACACAAGTATTAGTGGCTTCTTCTTGTCCTTGAGTCATCTTGAAGTCCTTGATTTGAGCTATAACCTTCTCTCCGGAGAGCTACCCTTGTCTCTACCTTTCAGATATATCAGAACTCTTGGATTTCTCTTTCAATGGATTCCTCCTGGACTACTGAACTGCTCCAAGCTTGAGGTCTTACGTGCCGGTTTCAATTATCTTTCGGGGCCCCTTCCTAGTGACATTTACCATGTTCCAACACTTCAAGAAATCTCATTACCTTCTAATAATCTCTTTGGACCCATTAGTAACAGCATTGTCAATCTTACCAACCTCAGAATTCTAGAGCTCTACTTCAATAAGCTGACAGGGTCGCTTCCTCTCGATGTTGGGAAGCTCTCCAAGTTGAGGCTCTTAATCTTTCATTTAAACGATCTACAAGGTTCTCTGCCACCATCTTTGATCAATTGCACAACCCTTATAGAGCTGAATCTGGGATTCAATCAATTGGGAGGAGATATCTCCAAGCTTAATTTCTCCATACTTACTCGACTTAGTAAACTTGACCTTGTGGGGAATCACTTCACCGGTACCTTGCCAATAAGCCTTTACTCATGCAAATCTCTGAAAGCATTGCGACTGAGCGGGAATAATCTAGAAGGACAAATAAAACCCGAGATTCTATCACTGAAATCGCTGTCTTTCCTCTCCCTGGCTCGGAACAGACTGACCAATGTCACAGGTGCAATGCAGATATTGATGGGTAGCAAAAGTCTCACGGTACTGATTTTGTCAGTTAACTTTGTAGGTGAAGAAATGCCAGATGGAGATGGAATGATTGATTCTGCGTTCCAAAATCTTAGGGTTTTTGCTGCCTCCGATTGCCAATTTACAGGTCAAATACCATTATGGCTGTCAAAGCTGAAGAAACTTGAAATCCTGGATCTGTCTTCTAATAGAATCACTGGCACGATTCCTGGTTGGTTAGGGACTCTTCCAAATCTGTTCTATGTAAACTTGAATAATAACTCCCTTTCAGGTGAATTTCCAAAGGAGCTTTGCAGATTACAAGCATTGGTATCACCACGAAAGGCTGCAGATCAAACAGGCCATGGTTATTTTGAACTACCCACGTACTCCAAATTCGAACGCACTAATGCGTCCATAACTCCCTTGCAGTACAAGAATCTGTCCAATATGCCAAGACTAATATACATCATGAACAACAGTCTAAGTGGACGGATACCTACTGAGATTGGTCAATTGCAACTTCTTCAGAAGCTGGATCTTAGCCTCAACAACTTGCTTGGCGGCATTCCAAACCAGATATCTAACCTCACAAACTTGGAGAGATTAGACCTCTCAAGCAACCAATTGTCAGGGGGAATCCCAGCTTCACTATCAAGTCTTCATTTCTTGTCATCATTTGCAGTTGCATACAATAATCTCCAAGGACAAATACCATCAAGCACTCAGCTCCAGGGCTTCAGTGCCACTGCATTTGAGGGTAACCCAGGACTTTGTGGAGCACCACTTCCAATTAATTGCGAACAGATGAATAGAAGTGGTATAAATAACAGGACCGAAGATGTCCATAATGGTAGTGAATTTCCATGGTGGCATATTTCTGTGGCTCTTGGTTTCATTACAGGATTCTGGGGAGTTTGTGGACCTCTGGCGTTGAGCAGGTCATGGAGATGTGCATATTTCCAATTTCTGTACGGGATAAAAGATAAGGTCAAGAACATGGTAGCATATGGCAGAATGTACAGAAGGCTTAAATTAGTCGAAGCTTCTCATTTTAATATTTTATATAAGCTTTATAAACCACTAAATTACATATATAGCATGCCAAATTATGTCAATCTGTGTTTAGGGTTTCATCCGAGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001678 GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005356 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009679 GO:0009743 GO:0009746 GO:0009749 GO:0009987 GO:0010033 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015578 GO:0015672 GO:0015749 GO:0015757 GO:0015761 GO:0016020 GO:0019725 GO:0022804 GO:0022857 GO:0022890 GO:0033500 GO:0034219 GO:0034220 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0044464 GO:0046323 GO:0048878 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051716 GO:0055055 GO:0055056 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071702 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:1901700 GO:1901701 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

730

Amino Acids

80.66

Weight (kDa)

8.97

Isoelectric Point (pI)

32.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	24 - 59	1.6e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	283 - 342	9e-06	Leucine rich repeat
LRR_8	PF13855	403 - 444	8.2e-08	Leucine rich repeat
LRR_14	PF23598	490 - 578	7.4e-08	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50310 AT1G50310 AT3G19940 AT5G23270
fragaria_vesca	FvH4_2g06240 FvH4_2g06241 FvH4_2g06250
malus_domestica	MD00G1119600.v1.1 MD13G1238600.v1.1 MD13G1238700.v1.1 MD15G1433200.v1.1 MD16G1243500.v1.1
prunus_persica	Prupe.1G070800_v2.0.a1 Prupe.1G070900_v2.0.a1
pyrus_communis	pycom13g21110 pycom13g21120
rosa_chinensis	RchiOBHm_Chr4g0398701 RchiOBHm_Chr6g0256931 RchiOBHm_Chr6g0256941
rosa_laevigata	RLG00000009330 RLG00000014660 RLG00000014663
rosa_multiflora	Rmu_sc0000659.1_g000045 Rmu_sc0008600.1_g000002 Rmu_sc0017404.1_g000011
rosa_roxburghii	Rroxscaffold_5G00343660 Rroxscaffold_7G00208330 Rroxscaffold_7G00208350
rosa_rugosa	Rorug04G0010900 Rorug05G0576400 Rorug05G0576500 Rorug05G0576600
rosa_samantha	Rh4DG080100 Rh6AG095000 Rh6BG086100 Rh6BG086200 Rh6CG082200 Rh6DG077900
rosa_wichuraiana	Rw4G007340 Rw6G008110 Rw6G008130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2121
Acc36I	ACCTGC	1 cut(s)	1974
Acc65I	GGTACC	1 cut(s)	887
AccB1I	GGYRCC	1 cut(s)	887
AccBSI	CCGCTC	1 cut(s)	942
AccI	GTMKAC	1 cut(s)	113
AccIII	TCCGGA	1 cut(s)	392
AciI	CCGC	2 cut(s)	942, 1608
AclWI	GGATC	2 cut(s)	1248, 1590
AcsI	RAATTY	4 cut(s)	636, 1340, 1439, 1904
AcuI	CTGAAG	4 cut(s)	74, 1241, 1556, 1768
AfaI	GTAC	6 cut(s)	889, 1080, 1433, 1478, 2018, 2066
AfiI	CCNNNNNNNGG	6 cut(s)	160, 215, 233, 705, 1009, 1014
AgeI	ACCGGT	1 cut(s)	884
AjnI	CCWGG	6 cut(s)	463, 1008, 1236, 1273, 1776, 1810
AjuI	GAANNNNNNNTTGG	2 cut(s)	815, 847
Alw21I	GWGCWC	2 cut(s)	648, 1828
Alw26I	GTCTC	2 cut(s)	414, 1076
AlwI	GGATC	2 cut(s)	1248, 1590
AlwNI	CAGNNNCTG	1 cut(s)	1579
Ama87I	CYCGRG	1 cut(s)	971
Aor13HI	TCCGGA	1 cut(s)	392
AoxI	GGCC	3 cut(s)	217, 524, 1405
ApaI	GGGCCC	1 cut(s)	528
ApeKI	GCWGC	4 cut(s)	81, 150, 1169, 1391
ApoI	RAATTY	4 cut(s)	636, 1340, 1439, 1904
AseI	ATTAAT	1 cut(s)	1839
AsiGI	ACCGGT	1 cut(s)	884
Asp700I	GAANNNNTTC	1 cut(s)	878
Asp718I	GGTACC	1 cut(s)	887
AspS9I	GGNCC	5 cut(s)	524, 525, 596, 1878, 1967
AsuC2I	CCSGG	1 cut(s)	180
AsuHPI	GGTGA	6 cut(s)	155, 268, 874, 1118, 1349, 1371
AsuII	TTCGAA	1 cut(s)	1443
AvaI	CYCGRG	1 cut(s)	971
AvaII	GGWCC	3 cut(s)	596, 1878, 1967
BaeGI	GKGCMC	1 cut(s)	528
BanI	GGYRCC	1 cut(s)	887
BanII	GRGCYC	2 cut(s)	528, 648
BarI	GAAGNNNNNNTAC	2 cut(s)	229, 261
BbsI	GAAGAC	2 cut(s)	1239, 1697
Bbv12I	GWGCWC	2 cut(s)	648, 1828
BbvI	GCAGC	4 cut(s)	93, 137, 1156, 1378
BccI	CCATC	5 cut(s)	760, 1051, 1115, 1121, 1768
BceAI	ACGGC	1 cut(s)	138
BciT130I	CCWGG	6 cut(s)	465, 1010, 1238, 1275, 1778, 1812
BciVI	GTATCC	1 cut(s)	1533
BclI	TGATCA	1 cut(s)	759
BcnI	CCSGG	1 cut(s)	180
BcoDI	GTCTC	2 cut(s)	414, 1076
BfaI	CTAG	4 cut(s)	317, 534, 641, 953
BfmI	CTRYAG	2 cut(s)	48, 1392
BfuAI	ACCTGC	1 cut(s)	1974
BfuI	GTATCC	1 cut(s)	1533
BisI	GCNGC	5 cut(s)	82, 151, 1170, 1392, 1609
BlsI	GCNGC	5 cut(s)	83, 152, 1171, 1393, 1610
Bme1390I	CCNGG	7 cut(s)	180, 465, 1010, 1238, 1275, 1778, 1812
Bme18I	GGWCC	3 cut(s)	596, 1878, 1967
BmeT110I	CYCGRG	1 cut(s)	971
BmgT120I	GGNCC	5 cut(s)	524, 525, 596, 1878, 1967
BmiI	GGNNCC	5 cut(s)	525, 526, 527, 598, 889
BmrFI	CCNGG	7 cut(s)	180, 465, 1010, 1238, 1275, 1778, 1812
BoxI	GACNNNNGTC	1 cut(s)	1031
BpiI	GAAGAC	2 cut(s)	1239, 1697
BpmI	CTGGAG	1 cut(s)	1760
Bpu14I	TTCGAA	1 cut(s)	1443
BpuEI	CTTGAG	3 cut(s)	370, 509, 1645
BpuMI	CCSGG	1 cut(s)	180
BsaAI	YACGTR	2 cut(s)	500, 1431
BsaJI	CCNNGG	6 cut(s)	1008, 1408, 1747, 1777, 1810, 1910
BsaWI	WCCGGW	3 cut(s)	140, 392, 884
BsaXI	ACNNNNNCTCC	4 cut(s)	106, 136, 374, 404
Bsc4I	CCNNNNNNNGG	6 cut(s)	160, 215, 233, 705, 1009, 1014
Bse118I	RCCGGY	2 cut(s)	503, 884
Bse1I	ACTGG	1 cut(s)	1267
Bse3DI	GCAATG	2 cut(s)	929, 1050
BseAI	TCCGGA	1 cut(s)	392
BseBI	CCWGG	6 cut(s)	465, 1010, 1238, 1275, 1778, 1812
BseDI	CCNNGG	6 cut(s)	1008, 1408, 1747, 1777, 1810, 1910
BseGI	GGATG	1 cut(s)	2179
BseLI	CCNNNNNNNGG	6 cut(s)	160, 215, 233, 705, 1009, 1014
BseMI	GCAATG	2 cut(s)	929, 1050
BseMII	CTCAG	4 cut(s)	646, 929, 1539, 1784
BseNI	ACTGG	1 cut(s)	1267
BseRI	GAGGAG	2 cut(s)	114, 825
BseSI	GKGCMC	1 cut(s)	528
BseXI	GCAGC	4 cut(s)	93, 137, 1156, 1378
BseYI	CCCAGC	1 cut(s)	1687
BshFI	GGCC	3 cut(s)	219, 526, 1407
BshNI	GGYRCC	1 cut(s)	887
BshTI	ACCGGT	1 cut(s)	884
BsiHKAI	GWGCWC	2 cut(s)	648, 1828
BsiHKCI	CYCGRG	1 cut(s)	971
BsiSI	CCGG	5 cut(s)	141, 179, 393, 504, 885
BslFI	GGGAC	1 cut(s)	1300
BslI	CCNNNNNNNGG	6 cut(s)	160, 215, 233, 705, 1009, 1014
BsmAI	GTCTC	2 cut(s)	414, 1076
BsmFI	GGGAC	1 cut(s)	1300
BsmI	GAATGC	1 cut(s)	1611
BsnI	GGCC	3 cut(s)	219, 526, 1407
BsoBI	CYCGRG	1 cut(s)	971
Bsp119I	TTCGAA	1 cut(s)	1443
Bsp120I	GGGCCC	1 cut(s)	524
Bsp1286I	GDGCHC	3 cut(s)	528, 648, 1828
Bsp13I	TCCGGA	1 cut(s)	392
Bsp1407I	TGTACA	1 cut(s)	2064
Bsp143I	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
Bsp19I	CCATGG	2 cut(s)	1408, 1910
BspACI	CCGC	2 cut(s)	942, 1608
BspANI	GGCC	3 cut(s)	219, 526, 1407
BspCNI	CTCAG	4 cut(s)	645, 930, 1540, 1783
BspEI	TCCGGA	1 cut(s)	392
BspHI	TCATGA	1 cut(s)	1515
BspLI	GGNNCC	5 cut(s)	525, 526, 527, 598, 889
BspMAI	CTGCAG	1 cut(s)	1396
BspMI	ACCTGC	1 cut(s)	1974
BspPI	GGATC	2 cut(s)	1248, 1590
BspT104I	TTCGAA	1 cut(s)	1443
BspT107I	GGYRCC	1 cut(s)	887
BsrBI	CCGCTC	1 cut(s)	942
BsrDI	GCAATG	2 cut(s)	929, 1050
BsrFI	RCCGGY	2 cut(s)	503, 884
BsrGI	TGTACA	1 cut(s)	2064
BsrI	ACTGG	1 cut(s)	1267
BssAI	RCCGGY	2 cut(s)	503, 884
BssECI	CCNNGG	6 cut(s)	1008, 1408, 1747, 1777, 1810, 1910
BssMI	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
BssT1I	CCWWGG	3 cut(s)	1408, 1747, 1910
Bst2UI	CCWGG	6 cut(s)	465, 1010, 1238, 1275, 1778, 1812
Bst4CI	ACNGT	2 cut(s)	1078, 1526
Bst6I	CTCTTC	2 cut(s)	93, 1296
BstAUI	TGTACA	1 cut(s)	2064
BstBAI	YACGTR	2 cut(s)	500, 1431
BstBI	TTCGAA	1 cut(s)	1443
BstC8I	GCNNGC	2 cut(s)	64, 2147
BstDEI	CTNAG	8 cut(s)	632, 851, 938, 1157, 1529, 1548, 1586, 1770
BstDSI	CCRYGG	2 cut(s)	1408, 1910
BstEII	GGTNACC	1 cut(s)	1805
BstF5I	GGATG	1 cut(s)	2179
BstKTI	GATC	5 cut(s)	733, 762, 1243, 1399, 1585
BstMAI	GTCTC	2 cut(s)	414, 1076
BstMBI	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
BstMWI	GCNNNNNNNGC	1 cut(s)	1216
BstNI	CCWGG	6 cut(s)	465, 1010, 1238, 1275, 1778, 1812
BstNSI	RCATGY	2 cut(s)	66, 2149
BstPAI	GACNNNNGTC	1 cut(s)	1031
BstPI	GGTNACC	1 cut(s)	1805
BstSCI	CCNGG	7 cut(s)	178, 463, 1008, 1236, 1273, 1776, 1810
BstSFI	CTRYAG	2 cut(s)	48, 1392
BstSLI	GKGCMC	1 cut(s)	528
BstV1I	GCAGC	4 cut(s)	93, 137, 1156, 1378
BstV2I	GAAGAC	2 cut(s)	1239, 1697
BstX2I	RGATCY	2 cut(s)	1240, 1582
BstYI	RGATCY	2 cut(s)	1240, 1582
BsuI	GTATCC	1 cut(s)	1533
BsuRI	GGCC	3 cut(s)	219, 526, 1407
BtgI	CCRYGG	2 cut(s)	1408, 1910
BtsCI	GGATG	1 cut(s)	2179
BtsI	GCAGTG	1 cut(s)	1791
BtsIMutI	CAGTG	4 cut(s)	983, 1260, 1791, 1792
BveI	ACCTGC	1 cut(s)	1974
Cac8I	GCNNGC	2 cut(s)	64, 2147
CaiI	CAGNNNCTG	1 cut(s)	1579
CciI	TCATGA	1 cut(s)	1515
Cfr10I	RCCGGY	2 cut(s)	503, 884
Cfr13I	GGNCC	5 cut(s)	524, 525, 596, 1878, 1967
CseI	GACGC	1 cut(s)	1446
Csp6I	GTAC	6 cut(s)	888, 1079, 1432, 1477, 2017, 2065
CspAI	ACCGGT	1 cut(s)	884
CspCI	CAANNNNNGTGG	4 cut(s)	738, 773, 1780, 1815
CviAII	CATG	9 cut(s)	63, 548, 912, 1409, 1516, 1911, 1989, 2044, 2146
CviQI	GTAC	6 cut(s)	888, 1079, 1432, 1477, 2017, 2065
DdeI	CTNAG	8 cut(s)	632, 851, 938, 1157, 1529, 1548, 1586, 1770
DpnI	GATC	5 cut(s)	732, 761, 1242, 1398, 1584
DpnII	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
DraI	TTTAAA	1 cut(s)	726
Eam1104I	CTCTTC	2 cut(s)	93, 1296
EarI	CTCTTC	2 cut(s)	93, 1296
Ecl136II	GAGCTC	1 cut(s)	646
Eco130I	CCWWGG	3 cut(s)	1408, 1747, 1910
Eco147I	AGGCCT	1 cut(s)	219
Eco24I	GRGCYC	2 cut(s)	528, 648
Eco32I	GATATC	2 cut(s)	817, 1626
Eco47I	GGWCC	3 cut(s)	596, 1878, 1967
Eco53kI	GAGCTC	1 cut(s)	646
Eco57I	CTGAAG	4 cut(s)	74, 1241, 1556, 1768
Eco88I	CYCGRG	1 cut(s)	971
Eco91I	GGTNACC	1 cut(s)	1805
EcoICRI	GAGCTC	1 cut(s)	646
EcoO109I	RGGNCCY	2 cut(s)	524, 525
EcoO65I	GGTNACC	1 cut(s)	1805
EcoRI	GAATTC	1 cut(s)	636
EcoRII	CCWGG	6 cut(s)	463, 1008, 1236, 1273, 1776, 1810
EcoRV	GATATC	2 cut(s)	817, 1626
EcoT14I	CCWWGG	3 cut(s)	1408, 1747, 1910
EcoT38I	GRGCYC	2 cut(s)	528, 648
ErhI	CCWWGG	3 cut(s)	1408, 1747, 1910
FaeI	CATG	9 cut(s)	66, 551, 915, 1412, 1519, 1914, 1992, 2047, 2149
FaqI	GGGAC	1 cut(s)	1300
FatI	CATG	9 cut(s)	62, 547, 911, 1408, 1515, 1910, 1988, 2043, 2145
FauI	CCCGC	1 cut(s)	935
FauNDI	CATATG	1 cut(s)	2053
FbaI	TGATCA	1 cut(s)	759
FblI	GTMKAC	1 cut(s)	113
Fnu4HI	GCNGC	5 cut(s)	82, 151, 1170, 1392, 1609
FokI	GGATG	1 cut(s)	2166
FriOI	GRGCYC	2 cut(s)	528, 648
Fsp4HI	GCNGC	5 cut(s)	82, 151, 1170, 1392, 1609
FspBI	CTAG	4 cut(s)	317, 534, 641, 953
GluI	GCNGC	5 cut(s)	82, 151, 1170, 1392, 1609
GsaI	CCCAGC	1 cut(s)	1691
GsuI	CTGGAG	1 cut(s)	1760
HaeIII	GGCC	3 cut(s)	219, 526, 1407
HapII	CCGG	5 cut(s)	141, 179, 393, 504, 885
HgaI	GACGC	1 cut(s)	1446
Hin1II	CATG	9 cut(s)	66, 551, 915, 1412, 1519, 1914, 1992, 2047, 2149
HincII	GTYRAC	1 cut(s)	1096
HindII	GTYRAC	1 cut(s)	1096
HindIII	AAGCTT	4 cut(s)	485, 824, 2088, 2114
HpaI	GTTAAC	1 cut(s)	1096
HpaII	CCGG	5 cut(s)	141, 179, 393, 504, 885
HphI	GGTGA	6 cut(s)	155, 268, 874, 1118, 1349, 1371
Hpy166II	GTNNAC	6 cut(s)	114, 857, 1096, 1312, 1535, 1967
Hpy188I	TCNGA	8 cut(s)	422, 431, 635, 924, 1017, 1177, 1575, 2184
Hpy188III	TCNNGA	8 cut(s)	359, 393, 563, 641, 680, 953, 1516, 2038
Hpy8I	GTNNAC	6 cut(s)	114, 857, 1096, 1312, 1535, 1967
HpyAV	CCTTC	6 cut(s)	106, 395, 539, 588, 950, 2064
HpyCH4III	ACNGT	2 cut(s)	1078, 1526
HpyCH4IV	ACGT	2 cut(s)	499, 1430
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1216
HpyF3I	CTNAG	8 cut(s)	632, 851, 938, 1157, 1529, 1548, 1586, 1770
HpySE526I	ACGT	2 cut(s)	499, 1430
Hsp92II	CATG	9 cut(s)	66, 551, 915, 1412, 1519, 1914, 1992, 2047, 2149
Kpn2I	TCCGGA	1 cut(s)	392
KpnI	GGTACC	1 cut(s)	891
Ksp22I	TGATCA	1 cut(s)	759
KspAI	GTTAAC	1 cut(s)	1096
Kzo9I	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
LmnI	GCTCC	4 cut(s)	485, 1351, 1779, 1823
Lsp1109I	GCAGC	4 cut(s)	93, 137, 1156, 1378
MaeI	CTAG	4 cut(s)	317, 534, 641, 953
MaeII	ACGT	2 cut(s)	499, 1430
MaeIII	GTNAC	5 cut(s)	190, 536, 605, 1033, 1805
MalI	GATC	5 cut(s)	732, 761, 1242, 1398, 1584
MbiI	CCGCTC	1 cut(s)	942
MboI	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
MfeI	CAATTG	4 cut(s)	763, 803, 1559, 1670
MflI	RGATCY	2 cut(s)	1240, 1582
MhlI	GDGCHC	3 cut(s)	528, 648, 1828
MlyI	GAGTC	3 cut(s)	115, 361, 1282
MmeI	TCCRAC	1 cut(s)	578
MroI	TCCGGA	1 cut(s)	392
MroXI	GAANNNNTTC	1 cut(s)	878
MseI	TTAA	8 cut(s)	285, 713, 725, 828, 1095, 1839, 2076, 2100
MslI	CAYNNNNRTG	1 cut(s)	1993
MspI	CCGG	5 cut(s)	141, 179, 393, 504, 885
MspR9I	CCNGG	7 cut(s)	180, 465, 1010, 1238, 1275, 1778, 1812
MunI	CAATTG	4 cut(s)	763, 803, 1559, 1670
Mva1269I	GAATGC	1 cut(s)	1611
MvaI	CCWGG	6 cut(s)	465, 1010, 1238, 1275, 1778, 1812
MwoI	GCNNNNNNNGC	1 cut(s)	1216
NciI	CCSGG	1 cut(s)	180
NcoI	CCATGG	2 cut(s)	1408, 1910
NdeI	CATATG	1 cut(s)	2053
NdeII	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
NlaIII	CATG	9 cut(s)	66, 551, 915, 1412, 1519, 1914, 1992, 2047, 2149
NlaIV	GGNNCC	5 cut(s)	525, 526, 527, 598, 889
NmuCI	GTSAC	3 cut(s)	190, 536, 1033
NspI	RCATGY	2 cut(s)	66, 2149
NspV	TTCGAA	1 cut(s)	1443
PaeI	GCATGC	2 cut(s)	66, 2149
PagI	TCATGA	1 cut(s)	1515
PceI	AGGCCT	1 cut(s)	219
PctI	GAATGC	1 cut(s)	1611
PdmI	GAANNNNTTC	1 cut(s)	878
PflFI	GACNNNGTC	1 cut(s)	667
PfoI	TCCNGGA	2 cut(s)	463, 1236
PinAI	ACCGGT	1 cut(s)	884
PkrI	GCNGC	5 cut(s)	83, 152, 1171, 1393, 1610
PleI	GAGTC	3 cut(s)	115, 360, 1282
PpsI	GAGTC	3 cut(s)	115, 360, 1282
Ppu21I	YACGTR	2 cut(s)	500, 1431
PshAI	GACNNNNGTC	1 cut(s)	1031
PshBI	ATTAAT	1 cut(s)	1839
PsiI	TTATAA	1 cut(s)	2121
Psp124BI	GAGCTC	1 cut(s)	648
Psp6I	CCWGG	6 cut(s)	463, 1008, 1236, 1273, 1776, 1810
PspEI	GGTNACC	1 cut(s)	1805
PspFI	CCCAGC	1 cut(s)	1687
PspGI	CCWGG	6 cut(s)	463, 1008, 1236, 1273, 1776, 1810
PspN4I	GGNNCC	5 cut(s)	525, 526, 527, 598, 889
PspOMI	GGGCCC	1 cut(s)	524
PspPI	GGNCC	5 cut(s)	524, 525, 596, 1878, 1967
PstI	CTGCAG	1 cut(s)	1396
PstNI	CAGNNNCTG	1 cut(s)	1579
PsuI	RGATCY	2 cut(s)	1240, 1582
PsyI	GACNNNGTC	1 cut(s)	667
RsaI	GTAC	6 cut(s)	889, 1080, 1433, 1478, 2018, 2066
RsaNI	GTAC	6 cut(s)	888, 1079, 1432, 1477, 2017, 2065
RseI	CAYNNNNRTG	1 cut(s)	1993
SacI	GAGCTC	1 cut(s)	648
SaqAI	TTAA	8 cut(s)	285, 713, 725, 828, 1095, 1839, 2076, 2100
SatI	GCNGC	5 cut(s)	82, 151, 1170, 1392, 1609
Sau3AI	GATC	5 cut(s)	730, 759, 1240, 1396, 1582
Sau96I	GGNCC	5 cut(s)	524, 525, 596, 1878, 1967
SchI	GAGTC	3 cut(s)	115, 361, 1282
ScrFI	CCNGG	7 cut(s)	180, 465, 1010, 1238, 1275, 1778, 1812
SduI	GDGCHC	3 cut(s)	528, 648, 1828
SfcI	CTRYAG	2 cut(s)	48, 1392
SfuI	TTCGAA	1 cut(s)	1443
SinI	GGWCC	3 cut(s)	596, 1878, 1967
SmiMI	CAYNNNNRTG	1 cut(s)	1993
SmlI	CTYRAG	3 cut(s)	349, 488, 1660
SmoI	CTYRAG	3 cut(s)	349, 488, 1660
SphI	GCATGC	2 cut(s)	66, 2149
SseBI	AGGCCT	1 cut(s)	219
SsiI	CCGC	2 cut(s)	942, 1608
SspI	AATATT	1 cut(s)	2104
SspMI	CTAG	4 cut(s)	317, 534, 641, 953
SstI	GAGCTC	1 cut(s)	648
StuI	AGGCCT	1 cut(s)	219
StyD4I	CCNGG	7 cut(s)	178, 463, 1008, 1236, 1273, 1776, 1810
StyI	CCWWGG	3 cut(s)	1408, 1747, 1910
TaaI	ACNGT	2 cut(s)	1078, 1526
TaiI	ACGT	2 cut(s)	502, 1433
TaqI	TCGA	5 cut(s)	119, 681, 847, 1443, 2085
TaqII	GACCGA	2 cut(s)	178, 1895
TatI	WGTACW	2 cut(s)	1476, 2064
TauI	GCSGC	1 cut(s)	1611
Tru1I	TTAA	8 cut(s)	285, 713, 725, 828, 1095, 1839, 2076, 2100
Tru9I	TTAA	8 cut(s)	285, 713, 725, 828, 1095, 1839, 2076, 2100
TscAI	CASTG	4 cut(s)	990, 1267, 1792, 1798
TseFI	GTSAC	3 cut(s)	190, 536, 1033
TseI	GCWGC	4 cut(s)	81, 150, 1169, 1391
Tsp45I	GTSAC	3 cut(s)	190, 536, 1033
TspDTI	ATGAA	8 cut(s)	19, 240, 710, 1532, 1697, 1868, 1930, 2168
TspGWI	ACGGA	1 cut(s)	1552
TspRI	CASTG	4 cut(s)	990, 1267, 1792, 1798
Tth111I	GACNNNGTC	1 cut(s)	667
VpaK11BI	GGWCC	3 cut(s)	596, 1878, 1967
VspI	ATTAAT	1 cut(s)	1839
XapI	RAATTY	4 cut(s)	636, 1340, 1439, 1904
XbaI	TCTAGA	2 cut(s)	640, 952
XceI	RCATGY	2 cut(s)	66, 2149
XmiI	GTMKAC	1 cut(s)	113
XmnI	GAANNNNTTC	1 cut(s)	878
XspI	CTAG	4 cut(s)	317, 534, 641, 953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.