pycom13g21110
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
17328240 .. 17330409
2170 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g21110.2

Sequence Viewer

Length: 1392 bp
ATGGCTGGAGGAGTGTATGTTGGCGGCGGAGGAGGGAGCAGCTATGAAGGAGGTGTCACCATCTTTGTGATATTCACTTGTGTGGTGGCTGCCATGGGTGGTCTCCTCTTCGGATATGATCTCGGAATCTCAGGTGGAGTGACTTCAATGGAGTCGTTCTTGAGCAAGTTCTTCCCATCTGTGTTCCATAAAATGAAGAATGAGACTGCTAATCAAAACCAGTACTGCAAATTTGACAGCCAACTCCTCACATTGTTCACGTCTTGCCTCTACATTGCAGCCTTGGTTGCTTCCTTCTTTGCTTCATCAGTGACTAGGAAATTTGGCCGGAAAATCTCCATGTTTGTGGCAGGCCTTGTGTTTCTTCTTGGCTCTATCCTAAATGGTATTGCCAATAACATTATAGTTCTAATCATTGGTCGTCTCTTGCTTGGTATTGGTGTTGGATTTGCTAATCAGTCCGTTCCCGTTTATCTAGCGGAAATGGCTCCAACAAAGATTAGAGGAGCATTGAACATGGGGTTCCAAATGGCCATCACCATTGGTATTCTAATGGCAGGCCTTGTCAACTTTGGCACAGCCAAGATCAAGGGCGGATATGGCTGGCGAGTCTCTCTTGCTCTTGCAGCCGTTCCTTCCTTCATGATGACTCTTGCCGCAATATTTCTTCCCGACACTCCAAATTCCATCCTAGAAAGAGGTAACCCCGACAAGGCTAAGAAAATGTTGAAAAAAATCCGCGGCACCGACAACGTTGATAATGAGTTCCAAGACCTTCTTGCTGCTACTGACGCTGCCCAAAAAGTGGAAAACCAATGGACCAACATTACACAGCCGAGATATAGGCCTCAACTTGTCATTTGCATTCTCGTTCCATTCTTCCAGCAGCTCACCGGGATCAATGTAATCATGTTTTATGCACCTGTCCTTTTCATGACTTTGGGTTTTGGAGACGAAGCTTCCCTGATGTCCACAGTCATCACCGGGGGTGTTAACATGGTTGCCACCTTGGTGTCCATTCTCGCAGTTGATAAGTTTGGAAGAAGGGTGTTGTTCCTTCAAGGTGGTGTGCAGATGATCCTGTGCCAGATTGCTGTTGGAGTGATGATAGGCATGAAGTTTGGTCTCAGCGGAGTCGGATCCTTTACAAAAACTGAAGCCAATTGGATCTTGTTCTCGATCTGTGCATATGTAGCAGCGTTTGCATGGTCTTGGGGTCCGTTGGGGTGGTTGGTGCCGAGCGAGATCTGCCCTCTGGAGATCCGATCAGCCGGACAAGCCATCAACGTCTCGGTGAACATGTTCTTCACTTTTATCATTGGCCAAGTCTTCCTCAGCATGCTTTGCCACTTAAAGTTTGGTCTGTTCTTTTTCTTTGCCGGTTTTGATTGA

Protein Analysis

464

Amino Acids

49.93

Weight (kDa)

9.13

Isoelectric Point (pI)

30.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 743, 1234
AccB7I CCANNNNNTGG 1 cut(s) 805
AccII CGCG 1 cut(s) 741
AciI CCGC 8 cut(s) 24, 27, 479, 594, 657, 739, 741, 1131
AclI AACGTT 1 cut(s) 753
AclWI GGATC 6 cut(s) 905, 1072, 1134, 1147, 1175, 1255
AcoI YGGCCR 3 cut(s) 325, 531, 1321
AcsI RAATTY 3 cut(s) 230, 320, 682
AcuI CTGAAG 1 cut(s) 1176
AfaI GTAC 1 cut(s) 224
AfiI CCNNNNNNNGG 2 cut(s) 712, 805
AflIII ACRYGT 1 cut(s) 1299
AgsI TTSAA 4 cut(s) 147, 514, 730, 1061
AjiI CACGTC 1 cut(s) 261
AleI CACNNNNGTG 2 cut(s) 80, 1010
AluBI AGCT 3 cut(s) 42, 889, 959
AluI AGCT 3 cut(s) 42, 889, 959
Alw26I GTCTC 7 cut(s) 107, 197, 428, 616, 945, 1130, 1294
AlwI GGATC 6 cut(s) 905, 1072, 1134, 1147, 1175, 1255
AoxI GGCC 6 cut(s) 325, 352, 531, 559, 845, 1321
ApeKI GCWGC 8 cut(s) 39, 89, 278, 626, 782, 794, 886, 1196
ApoI RAATTY 3 cut(s) 230, 320, 682
Asp700I GAANNNNTTC 1 cut(s) 1301
AspS9I GGNCC 2 cut(s) 819, 1217
AsuC2I CCSGG 2 cut(s) 895, 985
AsuHPI GGTGA 5 cut(s) 49, 529, 883, 973, 1306
AvaII GGWCC 2 cut(s) 819, 1217
BalI TGGCCA 2 cut(s) 533, 1323
BamHI GGATCC 1 cut(s) 1139
BanI GGYRCC 2 cut(s) 743, 1234
BbsI GAAGAC 1 cut(s) 1321
BbvCI CCTCAGC 1 cut(s) 1334
BbvI GCAGC 8 cut(s) 51, 76, 290, 638, 769, 781, 898, 1208
BccI CCATC 5 cut(s) 68, 184, 542, 695, 1289
BceAI ACGGC 1 cut(s) 614
BcnI CCSGG 2 cut(s) 895, 985
BcoDI GTCTC 7 cut(s) 107, 197, 428, 616, 945, 1130, 1294
BfaI CTAG 3 cut(s) 315, 476, 692
BglII AGATCT 1 cut(s) 1245
BmcAI AGTACT 1 cut(s) 224
Bme1390I CCNGG 2 cut(s) 895, 985
Bme18I GGWCC 2 cut(s) 819, 1217
BmgBI CACGTC 1 cut(s) 261
BmgT120I GGNCC 2 cut(s) 819, 1217
BmiI GGNNCC 6 cut(s) 489, 524, 745, 1141, 1218, 1236
BmrFI CCNGG 2 cut(s) 895, 985
BpiI GAAGAC 1 cut(s) 1321
BpmI CTGGAG 2 cut(s) 27, 1277
Bpu10I CCTNAGC 1 cut(s) 1334
BpuEI CTTGAG 1 cut(s) 181
BpuMI CCSGG 2 cut(s) 895, 985
BsaI GGTCTC 2 cut(s) 107, 1130
BsaJI CCNNGG 5 cut(s) 93, 282, 739, 984, 1008
BsaXI ACNNNNNCTCC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 2 cut(s) 712, 805
Bse118I RCCGGY 1 cut(s) 1379
Bse1I ACTGG 1 cut(s) 220
Bse3DI GCAATG 1 cut(s) 273
BseDI CCNNGG 5 cut(s) 93, 282, 739, 984, 1008
BseGI GGATG 1 cut(s) 687
BseLI CCNNNNNNNGG 2 cut(s) 712, 805
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 3 cut(s) 144, 1141, 1348
BseNI ACTGG 1 cut(s) 220
BseRI GAGGAG 5 cut(s) 24, 45, 95, 236, 519
BseXI GCAGC 8 cut(s) 51, 76, 290, 638, 769, 781, 898, 1208
BsgI GTGCAG 1 cut(s) 1091
Bsh1236I CGCG 1 cut(s) 741
BshFI GGCC 6 cut(s) 327, 354, 533, 561, 847, 1323
BshNI GGYRCC 2 cut(s) 743, 1234
BsiSI CCGG 5 cut(s) 328, 894, 984, 1272, 1380
BslI CCNNNNNNNGG 2 cut(s) 712, 805
BsmAI GTCTC 7 cut(s) 107, 197, 428, 616, 945, 1130, 1294
BsmBI CGTCTC 3 cut(s) 428, 945, 1294
BsmI GAATGC 1 cut(s) 864
BsnI GGCC 6 cut(s) 327, 354, 533, 561, 847, 1323
Bso31I GGTCTC 2 cut(s) 107, 1130
Bsp19I CCATGG 1 cut(s) 93
BspACI CCGC 8 cut(s) 24, 27, 479, 594, 657, 739, 741, 1131
BspANI GGCC 6 cut(s) 327, 354, 533, 561, 847, 1323
BspCNI CTCAG 3 cut(s) 143, 1140, 1347
BspFNI CGCG 1 cut(s) 741
BspHI TCATGA 2 cut(s) 642, 933
BspLI GGNNCC 6 cut(s) 489, 524, 745, 1141, 1218, 1236
BspPI GGATC 6 cut(s) 905, 1072, 1134, 1147, 1175, 1255
BspT107I GGYRCC 2 cut(s) 743, 1234
BspTNI GGTCTC 2 cut(s) 107, 1130
BsrDI GCAATG 1 cut(s) 273
BsrFI RCCGGY 1 cut(s) 1379
BsrI ACTGG 1 cut(s) 220
BssAI RCCGGY 1 cut(s) 1379
BssECI CCNNGG 5 cut(s) 93, 282, 739, 984, 1008
BssT1I CCWWGG 3 cut(s) 93, 282, 1008
Bst4CI ACNGT 1 cut(s) 976
Bst6I CTCTTC 1 cut(s) 113
BstAPI GCANNNNNTGC 2 cut(s) 1202, 1344
BstC8I GCNNGC 4 cut(s) 352, 559, 605, 1340
BstDEI CTNAG 4 cut(s) 130, 717, 1127, 1334
BstDSI CCRYGG 2 cut(s) 93, 739
BstEII GGTNACC 1 cut(s) 701
BstF5I GGATG 1 cut(s) 687
BstFNI CGCG 1 cut(s) 741
BstMAI GTCTC 7 cut(s) 107, 197, 428, 616, 945, 1130, 1294
BstNSI RCATGY 2 cut(s) 1303, 1342
BstPI GGTNACC 1 cut(s) 701
BstSCI CCNGG 2 cut(s) 893, 983
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 8 cut(s) 51, 76, 290, 638, 769, 781, 898, 1208
BstV2I GAAGAC 1 cut(s) 1321
BstX2I RGATCY 4 cut(s) 1139, 1167, 1245, 1260
BstXI CCANNNNNNTGG 1 cut(s) 346
BstYI RGATCY 4 cut(s) 1139, 1167, 1245, 1260
BsuRI GGCC 6 cut(s) 327, 354, 533, 561, 847, 1323
BtgI CCRYGG 2 cut(s) 93, 739
BtrI CACGTC 1 cut(s) 261
BtsCI GGATG 1 cut(s) 687
BtsIMutI CAGTG 1 cut(s) 315
Cac8I GCNNGC 4 cut(s) 352, 559, 605, 1340
CciI TCATGA 2 cut(s) 642, 933
Cfr10I RCCGGY 1 cut(s) 1379
Cfr13I GGNCC 2 cut(s) 819, 1217
Cfr42I CCGCGG 1 cut(s) 742
CseI GACGC 1 cut(s) 800
Csp6I GTAC 1 cut(s) 223
CviQI GTAC 1 cut(s) 223
DdeI CTNAG 4 cut(s) 130, 717, 1127, 1334
EaeI YGGCCR 3 cut(s) 325, 531, 1321
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
EciI GGCGGA 2 cut(s) 42, 609
Eco130I CCWWGG 3 cut(s) 93, 282, 1008
Eco147I AGGCCT 3 cut(s) 354, 561, 847
Eco31I GGTCTC 2 cut(s) 107, 1130
Eco47I GGWCC 2 cut(s) 819, 1217
Eco57I CTGAAG 1 cut(s) 1176
Eco91I GGTNACC 1 cut(s) 701
EcoO65I GGTNACC 1 cut(s) 701
EcoT14I CCWWGG 3 cut(s) 93, 282, 1008
ErhI CCWWGG 3 cut(s) 93, 282, 1008
Esp3I CGTCTC 3 cut(s) 428, 945, 1294
FalI AAGNNNNNCTT 2 cut(s) 762, 794
FauNDI CATATG 1 cut(s) 1189
FokI GGATG 1 cut(s) 674
FspBI CTAG 3 cut(s) 315, 476, 692
GsuI CTGGAG 2 cut(s) 27, 1277
HaeIII GGCC 6 cut(s) 327, 354, 533, 561, 847, 1323
HapII CCGG 5 cut(s) 328, 894, 984, 1272, 1380
HgaI GACGC 1 cut(s) 800
HincII GTYRAC 2 cut(s) 568, 994
HindII GTYRAC 2 cut(s) 568, 994
HindIII AAGCTT 1 cut(s) 957
HinfI GANTC 5 cut(s) 126, 152, 609, 649, 1134
HpaI GTTAAC 1 cut(s) 994
HpaII CCGG 5 cut(s) 328, 894, 984, 1272, 1380
HphI GGTGA 5 cut(s) 49, 529, 883, 973, 1306
Hpy166II GTNNAC 5 cut(s) 258, 568, 972, 994, 1297
Hpy188I TCNGA 4 cut(s) 113, 125, 1139, 1265
Hpy188III TCNNGA 6 cut(s) 160, 643, 671, 934, 1177, 1256
Hpy8I GTNNAC 5 cut(s) 258, 568, 972, 994, 1297
HpyAV CCTTC 7 cut(s) 41, 304, 645, 649, 785, 1038, 1067
HpyCH4III ACNGT 1 cut(s) 976
HpyCH4IV ACGT 3 cut(s) 260, 753, 1287
HpyCH4V TGCA 8 cut(s) 228, 278, 626, 864, 920, 1072, 1187, 1205
HpyF3I CTNAG 4 cut(s) 130, 717, 1127, 1334
HpySE526I ACGT 3 cut(s) 260, 753, 1287
KspAI GTTAAC 1 cut(s) 994
KspI CCGCGG 1 cut(s) 742
LmnI GCTCC 3 cut(s) 36, 493, 506
Lsp1109I GCAGC 8 cut(s) 51, 76, 290, 638, 769, 781, 898, 1208
MaeI CTAG 3 cut(s) 315, 476, 692
MaeII ACGT 3 cut(s) 260, 753, 1287
MaeIII GTNAC 4 cut(s) 55, 139, 310, 701
MboII GAAGA 9 cut(s) 100, 163, 208, 356, 659, 871, 1053, 1297, 1321
MfeI CAATTG 1 cut(s) 1162
MflI RGATCY 4 cut(s) 1139, 1167, 1245, 1260
MlsI TGGCCA 2 cut(s) 533, 1323
MluCI AATT 4 cut(s) 230, 320, 682, 1162
MluNI TGGCCA 2 cut(s) 533, 1323
MlyI GAGTC 4 cut(s) 161, 618, 643, 1143
MmeI TCCRAC 4 cut(s) 424, 515, 1078, 1117
Mox20I TGGCCA 2 cut(s) 533, 1323
MroXI GAANNNNTTC 1 cut(s) 1301
MscI TGGCCA 2 cut(s) 533, 1323
MseI TTAA 2 cut(s) 993, 1352
MslI CAYNNNNRTG 4 cut(s) 65, 80, 344, 1010
Msp20I TGGCCA 2 cut(s) 533, 1323
MspA1I CMGCKG 2 cut(s) 741, 1131
MspI CCGG 5 cut(s) 328, 894, 984, 1272, 1380
MspR9I CCNGG 2 cut(s) 895, 985
MunI CAATTG 1 cut(s) 1162
Mva1269I GAATGC 1 cut(s) 864
MvnI CGCG 1 cut(s) 741
NciI CCSGG 2 cut(s) 895, 985
NcoI CCATGG 1 cut(s) 93
NdeI CATATG 1 cut(s) 1189
NlaIV GGNNCC 6 cut(s) 489, 524, 745, 1141, 1218, 1236
NmeAIII GCCGAG 2 cut(s) 861, 1263
NmuCI GTSAC 3 cut(s) 55, 139, 310
NspI RCATGY 2 cut(s) 1303, 1342
OliI CACNNNNGTG 2 cut(s) 80, 1010
PaeI GCATGC 1 cut(s) 1342
PagI TCATGA 2 cut(s) 642, 933
PceI AGGCCT 3 cut(s) 354, 561, 847
PciI ACATGT 1 cut(s) 1299
PctI GAATGC 1 cut(s) 864
PdmI GAANNNNTTC 1 cut(s) 1301
PfeI GAWTC 1 cut(s) 126
PflMI CCANNNNNTGG 1 cut(s) 805
PleI GAGTC 4 cut(s) 160, 617, 643, 1142
PpsI GAGTC 4 cut(s) 160, 617, 643, 1142
PscI ACATGT 1 cut(s) 1299
Psp1406I AACGTT 1 cut(s) 753
PspEI GGTNACC 1 cut(s) 701
PspN4I GGNNCC 6 cut(s) 489, 524, 745, 1141, 1218, 1236
PspPI GGNCC 2 cut(s) 819, 1217
PsuI RGATCY 4 cut(s) 1139, 1167, 1245, 1260
RsaI GTAC 1 cut(s) 224
RsaNI GTAC 1 cut(s) 223
RseI CAYNNNNRTG 4 cut(s) 65, 80, 344, 1010
SacII CCGCGG 1 cut(s) 742
SaqAI TTAA 2 cut(s) 993, 1352
Sau96I GGNCC 2 cut(s) 819, 1217
ScaI AGTACT 1 cut(s) 224
SchI GAGTC 4 cut(s) 161, 618, 643, 1143
ScrFI CCNGG 2 cut(s) 895, 985
Sfr303I CCGCGG 1 cut(s) 742
SgrBI CCGCGG 1 cut(s) 742
SinI GGWCC 2 cut(s) 819, 1217
SmiMI CAYNNNNRTG 4 cut(s) 65, 80, 344, 1010
SmlI CTYRAG 1 cut(s) 160
SmoI CTYRAG 1 cut(s) 160
SphI GCATGC 1 cut(s) 1342
Sse9I AATT 4 cut(s) 230, 320, 682, 1162
SseBI AGGCCT 3 cut(s) 354, 561, 847
SsiI CCGC 8 cut(s) 24, 27, 479, 594, 657, 739, 741, 1131
SspI AATATT 1 cut(s) 663
SspMI CTAG 3 cut(s) 315, 476, 692
StuI AGGCCT 3 cut(s) 354, 561, 847
StyD4I CCNGG 2 cut(s) 893, 983
StyI CCWWGG 3 cut(s) 93, 282, 1008
TaaI ACNGT 1 cut(s) 976
TaiI ACGT 3 cut(s) 263, 756, 1290
TaqI TCGA 1 cut(s) 1178
TasI AATT 4 cut(s) 230, 320, 682, 1162
TatI WGTACW 1 cut(s) 222
TauI GCSGC 3 cut(s) 27, 659, 744
TfiI GAWTC 1 cut(s) 126
Tru1I TTAA 2 cut(s) 993, 1352
Tru9I TTAA 2 cut(s) 993, 1352
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 3 cut(s) 55, 139, 310
TseI GCWGC 8 cut(s) 39, 89, 278, 626, 782, 794, 886, 1196
Tsp45I GTSAC 3 cut(s) 55, 139, 310
TspDTI ATGAA 6 cut(s) 60, 209, 294, 631, 922, 1130
TspGWI ACGGA 2 cut(s) 451, 1209
TspRI CASTG 1 cut(s) 315
Van91I CCANNNNNTGG 1 cut(s) 805
VpaK11BI GGWCC 2 cut(s) 819, 1217
XapI RAATTY 3 cut(s) 230, 320, 682
XceI RCATGY 2 cut(s) 1303, 1342
XcmI CCANNNNNNNNNTGG 2 cut(s) 1094, 1355
XmnI GAANNNNTTC 1 cut(s) 1301
XspI CTAG 3 cut(s) 315, 476, 692
ZrmI AGTACT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.