acyl-activating enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G65880 AT1G65890 AT1G66120 |
| fragaria_vesca | FvH4_1g27440 FvH4_1g27450 |
| malus_domestica | MD09G1280400.v1.1 MD17G1287600.v1.1 |
| prunus_persica | Prupe.3G013700_v2.0.a1 |
| pyrus_communis | pycom09g18850 pycom17g27060 |
| rosa_chinensis | RchiOBHm_Chr3g0488561 RchiOBHm_Chr3g0488571 |
| rosa_laevigata | RLG00000022942 RLG00000022943 |
| rosa_multiflora | Rmu_sc0004402.1_g000006 Rmu_sc0004402.1_g000007 Rmu_sc0005363.1_g000024 Rmu_sc0005363.1_g000025 |
| rosa_roxburghii | Rroxscaffold_6G00394130 Rroxscaffold_6G00394140 |
| rosa_rugosa | Rorug03G0239300 Rorug03G0239400 |
| rosa_samantha | Rh3AG288300 Rh3AG288400 Rh3BG325000 Rh3BG325100 Rh3CG322200 Rh3CG322300 Rh3DG321000 Rh3DG321100 Rh4AG012700 Rh7BG359000 |
| rosa_wichuraiana | Rw3G025510 Rw3G025520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1389 |
| Acc65I | GGTACC | 1 cut(s) | 587 |
| AccB1I | GGYRCC | 1 cut(s) | 587 |
| AccI | GTMKAC | 1 cut(s) | 687 |
| AccII | CGCG | 3 cut(s) | 653, 1159, 1729 |
| AclI | AACGTT | 1 cut(s) | 53 |
| AclWI | GGATC | 2 cut(s) | 554, 1621 |
| AcoI | YGGCCR | 3 cut(s) | 225, 1422, 1706 |
| AcsI | RAATTY | 1 cut(s) | 874 |
| AcuI | CTGAAG | 3 cut(s) | 423, 1137, 1241 |
| AfaI | GTAC | 4 cut(s) | 270, 589, 760, 1394 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 260, 460, 1163, 1441, 1442, 1613, 1614 |
| AflII | CTTAAG | 1 cut(s) | 1631 |
| AflIII | ACRYGT | 1 cut(s) | 1303 |
| AgsI | TTSAA | 6 cut(s) | 61, 548, 977, 1370, 1703, 1715 |
| AhlI | ACTAGT | 1 cut(s) | 761 |
| AjiI | CACGTC | 1 cut(s) | 1126 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 329, 361 |
| AluBI | AGCT | 4 cut(s) | 68, 266, 1235, 1642 |
| AluI | AGCT | 4 cut(s) | 68, 266, 1235, 1642 |
| Alw26I | GTCTC | 5 cut(s) | 497, 1269, 1403, 1478, 1641 |
| AlwI | GGATC | 2 cut(s) | 554, 1621 |
| Ama87I | CYCGRG | 1 cut(s) | 375 |
| AoxI | GGCC | 8 cut(s) | 125, 225, 747, 902, 1005, 1108, 1422, 1706 |
| ApeKI | GCWGC | 2 cut(s) | 941, 1200 |
| ApoI | RAATTY | 1 cut(s) | 874 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1557 |
| Asp718I | GGTACC | 1 cut(s) | 587 |
| AspLEI | GCGC | 1 cut(s) | 653 |
| AspS9I | GGNCC | 5 cut(s) | 748, 902, 907, 1013, 1323 |
| AsuC2I | CCSGG | 1 cut(s) | 791 |
| AsuHPI | GGTGA | 3 cut(s) | 921, 1424, 1493 |
| AvaI | CYCGRG | 1 cut(s) | 375 |
| AvaII | GGWCC | 3 cut(s) | 907, 1013, 1323 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 750, 783 |
| BalI | TGGCCA | 1 cut(s) | 1424 |
| BanI | GGYRCC | 1 cut(s) | 587 |
| BauI | CACGAG | 1 cut(s) | 440 |
| BbsI | GAAGAC | 2 cut(s) | 411, 1175 |
| BbvCI | CCTCAGC | 1 cut(s) | 1671 |
| BbvI | GCAGC | 2 cut(s) | 928, 1212 |
| BccI | CCATC | 6 cut(s) | 717, 1066, 1157, 1168, 1254, 1292 |
| BceAI | ACGGC | 4 cut(s) | 233, 1400, 1533, 1721 |
| BciVI | GTATCC | 1 cut(s) | 211 |
| BcnI | CCSGG | 1 cut(s) | 791 |
| BcoDI | GTCTC | 5 cut(s) | 497, 1269, 1403, 1478, 1641 |
| BcuI | ACTAGT | 1 cut(s) | 761 |
| BfaI | CTAG | 4 cut(s) | 155, 293, 762, 1472 |
| BfrI | CTTAAG | 1 cut(s) | 1631 |
| BfuI | GTATCC | 1 cut(s) | 211 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1421 |
| BglII | AGATCT | 2 cut(s) | 795, 1691 |
| BisI | GCNGC | 6 cut(s) | 159, 312, 747, 942, 1201, 1730 |
| BlpI | GCTNAGC | 1 cut(s) | 1097 |
| BlsI | GCNGC | 6 cut(s) | 160, 313, 748, 943, 1202, 1731 |
| Bme1390I | CCNGG | 1 cut(s) | 791 |
| Bme18I | GGWCC | 3 cut(s) | 907, 1013, 1323 |
| BmeT110I | CYCGRG | 1 cut(s) | 375 |
| BmgBI | CACGTC | 1 cut(s) | 1126 |
| BmgT120I | GGNCC | 5 cut(s) | 748, 902, 907, 1013, 1323 |
| BmiI | GGNNCC | 1 cut(s) | 589 |
| BmrFI | CCNGG | 1 cut(s) | 791 |
| BmsI | GCATC | 3 cut(s) | 228, 972, 1110 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1415 |
| BpiI | GAAGAC | 2 cut(s) | 411, 1175 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 369, 401 |
| BpmI | CTGGAG | 3 cut(s) | 282, 371, 1365 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1638, 1671 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1097 |
| BpuEI | CTTGAG | 2 cut(s) | 1128, 1427 |
| BpuMI | CCSGG | 1 cut(s) | 791 |
| BsaAI | YACGTR | 1 cut(s) | 1306 |
| BsaJI | CCNNGG | 6 cut(s) | 255, 471, 625, 751, 789, 1002 |
| BsaWI | WCCGGW | 2 cut(s) | 920, 1015 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1170, 1200 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 260, 460, 1163, 1441, 1442, 1613, 1614 |
| Bse118I | RCCGGY | 4 cut(s) | 223, 424, 904, 1708 |
| Bse1I | ACTGG | 2 cut(s) | 388, 1015 |
| Bse3DI | GCAATG | 4 cut(s) | 306, 712, 724, 1650 |
| BseDI | CCNNGG | 6 cut(s) | 255, 471, 625, 751, 789, 1002 |
| BseGI | GGATG | 7 cut(s) | 302, 495, 728, 1265, 1291, 1603, 1681 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 260, 460, 1163, 1441, 1442, 1613, 1614 |
| BseMI | GCAATG | 4 cut(s) | 306, 712, 724, 1650 |
| BseMII | CTCAG | 4 cut(s) | 143, 1050, 1284, 1662 |
| BseNI | ACTGG | 2 cut(s) | 388, 1015 |
| BseRI | GAGGAG | 2 cut(s) | 488, 642 |
| BseX3I | CGGCCG | 1 cut(s) | 1706 |
| BseXI | GCAGC | 2 cut(s) | 928, 1212 |
| Bsh1236I | CGCG | 3 cut(s) | 653, 1159, 1729 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1709 |
| BshFI | GGCC | 8 cut(s) | 127, 227, 749, 904, 1007, 1110, 1424, 1708 |
| BshNI | GGYRCC | 1 cut(s) | 587 |
| BsiEI | CGRYCG | 1 cut(s) | 1709 |
| BsiHKCI | CYCGRG | 1 cut(s) | 375 |
| BsiSI | CCGG | 7 cut(s) | 224, 425, 791, 905, 921, 1016, 1709 |
| BslFI | GGGAC | 1 cut(s) | 688 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 260, 460, 1163, 1441, 1442, 1613, 1614 |
| BsmAI | GTCTC | 5 cut(s) | 497, 1269, 1403, 1478, 1641 |
| BsmBI | CGTCTC | 1 cut(s) | 1269 |
| BsmFI | GGGAC | 1 cut(s) | 688 |
| BsnI | GGCC | 8 cut(s) | 127, 227, 749, 904, 1007, 1110, 1424, 1708 |
| BsoBI | CYCGRG | 1 cut(s) | 375 |
| Bsp143I | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1097 |
| Bsp19I | CCATGG | 1 cut(s) | 255 |
| BspANI | GGCC | 8 cut(s) | 127, 227, 749, 904, 1007, 1110, 1424, 1708 |
| BspCNI | CTCAG | 4 cut(s) | 142, 1051, 1283, 1663 |
| BspFNI | CGCG | 3 cut(s) | 653, 1159, 1729 |
| BspLI | GGNNCC | 1 cut(s) | 589 |
| BspPI | GGATC | 2 cut(s) | 554, 1621 |
| BspT107I | GGYRCC | 1 cut(s) | 587 |
| BspTI | CTTAAG | 1 cut(s) | 1631 |
| BsrDI | GCAATG | 4 cut(s) | 306, 712, 724, 1650 |
| BsrFI | RCCGGY | 4 cut(s) | 223, 424, 904, 1708 |
| BsrI | ACTGG | 2 cut(s) | 388, 1015 |
| BssAI | RCCGGY | 4 cut(s) | 223, 424, 904, 1708 |
| BssECI | CCNNGG | 6 cut(s) | 255, 471, 625, 751, 789, 1002 |
| BssMI | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| BssSI | CACGAG | 1 cut(s) | 440 |
| BssT1I | CCWWGG | 1 cut(s) | 255 |
| Bst2BI | CACGAG | 1 cut(s) | 440 |
| Bst4CI | ACNGT | 2 cut(s) | 143, 850 |
| Bst6I | CTCTTC | 1 cut(s) | 56 |
| BstAFI | CTTAAG | 1 cut(s) | 1631 |
| BstBAI | YACGTR | 1 cut(s) | 1306 |
| BstC8I | GCNNGC | 2 cut(s) | 532, 987 |
| BstDEI | CTNAG | 8 cut(s) | 129, 1059, 1097, 1105, 1270, 1638, 1643, 1671 |
| BstDSI | CCRYGG | 2 cut(s) | 255, 751 |
| BstF5I | GGATG | 7 cut(s) | 302, 495, 728, 1265, 1291, 1603, 1681 |
| BstFNI | CGCG | 3 cut(s) | 653, 1159, 1729 |
| BstHHI | GCGC | 1 cut(s) | 653 |
| BstKTI | GATC | 7 cut(s) | 562, 798, 1314, 1321, 1501, 1629, 1694 |
| BstMAI | GTCTC | 5 cut(s) | 497, 1269, 1403, 1478, 1641 |
| BstMBI | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| BstMCI | CGRYCG | 1 cut(s) | 1709 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 648, 1107, 1421 |
| BstNSI | RCATGY | 4 cut(s) | 538, 681, 782, 989 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1415 |
| BstSCI | CCNGG | 1 cut(s) | 789 |
| BstUI | CGCG | 3 cut(s) | 653, 1159, 1729 |
| BstV1I | GCAGC | 2 cut(s) | 928, 1212 |
| BstV2I | GAAGAC | 2 cut(s) | 411, 1175 |
| BstX2I | RGATCY | 3 cut(s) | 795, 1626, 1691 |
| BstYI | RGATCY | 3 cut(s) | 795, 1626, 1691 |
| BstZI | CGGCCG | 1 cut(s) | 1706 |
| BsuI | GTATCC | 1 cut(s) | 211 |
| BsuRI | GGCC | 8 cut(s) | 127, 227, 749, 904, 1007, 1110, 1424, 1708 |
| BtgI | CCRYGG | 2 cut(s) | 255, 751 |
| BtrI | CACGTC | 1 cut(s) | 1126 |
| BtsCI | GGATG | 7 cut(s) | 302, 495, 728, 1265, 1291, 1603, 1681 |
| BtsIMutI | CAGTG | 1 cut(s) | 1008 |
| Cac8I | GCNNGC | 2 cut(s) | 532, 987 |
| CfoI | GCGC | 1 cut(s) | 653 |
| Cfr10I | RCCGGY | 4 cut(s) | 223, 424, 904, 1708 |
| Cfr13I | GGNCC | 5 cut(s) | 748, 902, 907, 1013, 1323 |
| CseI | GACGC | 2 cut(s) | 305, 835 |
| Csp6I | GTAC | 4 cut(s) | 269, 588, 759, 1393 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1025, 1060 |
| CviQI | GTAC | 4 cut(s) | 269, 588, 759, 1393 |
| DdeI | CTNAG | 8 cut(s) | 129, 1059, 1097, 1105, 1270, 1638, 1643, 1671 |
| DpnI | GATC | 7 cut(s) | 561, 797, 1313, 1320, 1500, 1628, 1693 |
| DpnII | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| DraI | TTTAAA | 2 cut(s) | 573, 1252 |
| EaeI | YGGCCR | 3 cut(s) | 225, 1422, 1706 |
| EagI | CGGCCG | 1 cut(s) | 1706 |
| Eam1104I | CTCTTC | 1 cut(s) | 56 |
| EarI | CTCTTC | 1 cut(s) | 56 |
| EciI | GGCGGA | 1 cut(s) | 311 |
| EclXI | CGGCCG | 1 cut(s) | 1706 |
| Eco130I | CCWWGG | 1 cut(s) | 255 |
| Eco147I | AGGCCT | 1 cut(s) | 1110 |
| Eco47I | GGWCC | 3 cut(s) | 907, 1013, 1323 |
| Eco52I | CGGCCG | 1 cut(s) | 1706 |
| Eco57I | CTGAAG | 3 cut(s) | 423, 1137, 1241 |
| Eco88I | CYCGRG | 1 cut(s) | 375 |
| EcoT14I | CCWWGG | 1 cut(s) | 255 |
| EcoT22I | ATGCAT | 2 cut(s) | 819, 987 |
| ErhI | CCWWGG | 1 cut(s) | 255 |
| Esp3I | CGTCTC | 1 cut(s) | 1269 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1497, 1529 |
| FaqI | GGGAC | 1 cut(s) | 688 |
| FauI | CCCGC | 1 cut(s) | 946 |
| FauNDI | CATATG | 2 cut(s) | 831, 1240 |
| FblI | GTMKAC | 1 cut(s) | 687 |
| Fnu4HI | GCNGC | 6 cut(s) | 159, 312, 747, 942, 1201, 1730 |
| FokI | GGATG | 7 cut(s) | 289, 482, 735, 1272, 1278, 1610, 1688 |
| Fsp4HI | GCNGC | 6 cut(s) | 159, 312, 747, 942, 1201, 1730 |
| FspBI | CTAG | 4 cut(s) | 155, 293, 762, 1472 |
| GlaI | GCGC | 1 cut(s) | 652 |
| GluI | GCNGC | 6 cut(s) | 159, 312, 747, 942, 1201, 1730 |
| GsuI | CTGGAG | 3 cut(s) | 282, 371, 1365 |
| HaeIII | GGCC | 8 cut(s) | 127, 227, 749, 904, 1007, 1110, 1424, 1708 |
| HapII | CCGG | 7 cut(s) | 224, 425, 791, 905, 921, 1016, 1709 |
| HgaI | GACGC | 2 cut(s) | 305, 835 |
| HhaI | GCGC | 1 cut(s) | 653 |
| Hin6I | GCGC | 1 cut(s) | 651 |
| HinP1I | GCGC | 1 cut(s) | 651 |
| HincII | GTYRAC | 1 cut(s) | 1123 |
| HindII | GTYRAC | 1 cut(s) | 1123 |
| HinfI | GANTC | 7 cut(s) | 85, 407, 476, 697, 1063, 1225, 1288 |
| HpaII | CCGG | 7 cut(s) | 224, 425, 791, 905, 921, 1016, 1709 |
| HphI | GGTGA | 3 cut(s) | 921, 1424, 1493 |
| Hpy166II | GTNNAC | 4 cut(s) | 688, 732, 929, 1123 |
| Hpy188I | TCNGA | 9 cut(s) | 73, 84, 132, 403, 472, 481, 867, 1221, 1578 |
| Hpy8I | GTNNAC | 4 cut(s) | 688, 732, 929, 1123 |
| Hpy99I | CGWCG | 1 cut(s) | 1421 |
| HpyCH4III | ACNGT | 2 cut(s) | 143, 850 |
| HpyCH4IV | ACGT | 6 cut(s) | 53, 728, 822, 1125, 1278, 1305 |
| HpyCH4V | TGCA | 5 cut(s) | 241, 717, 817, 985, 1460 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 648, 1107, 1421 |
| HpyF3I | CTNAG | 8 cut(s) | 129, 1059, 1097, 1105, 1270, 1638, 1643, 1671 |
| HpySE526I | ACGT | 6 cut(s) | 53, 728, 822, 1125, 1278, 1305 |
| HspAI | GCGC | 1 cut(s) | 651 |
| KpnI | GGTACC | 1 cut(s) | 591 |
| Kzo9I | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| LmnI | GCTCC | 3 cut(s) | 217, 263, 629 |
| Lsp1109I | GCAGC | 2 cut(s) | 928, 1212 |
| LweI | GCATC | 3 cut(s) | 228, 972, 1110 |
| MaeI | CTAG | 4 cut(s) | 155, 293, 762, 1472 |
| MaeII | ACGT | 6 cut(s) | 53, 728, 822, 1125, 1278, 1305 |
| MaeIII | GTNAC | 4 cut(s) | 781, 823, 888, 1516 |
| MalI | GATC | 7 cut(s) | 561, 797, 1313, 1320, 1500, 1628, 1693 |
| MboI | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| MboII | GAAGA | 8 cut(s) | 73, 416, 854, 1180, 1234, 1508, 1517, 1550 |
| MflI | RGATCY | 3 cut(s) | 795, 1626, 1691 |
| MlsI | TGGCCA | 1 cut(s) | 1424 |
| MluCI | AATT | 3 cut(s) | 7, 874, 1601 |
| MluNI | TGGCCA | 1 cut(s) | 1424 |
| MlyI | GAGTC | 3 cut(s) | 401, 485, 691 |
| Mox20I | TGGCCA | 1 cut(s) | 1424 |
| Mph1103I | ATGCAT | 2 cut(s) | 819, 987 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1557 |
| MscI | TGGCCA | 1 cut(s) | 1424 |
| MseI | TTAA | 9 cut(s) | 177, 273, 572, 638, 647, 855, 1079, 1251, 1632 |
| MslI | CAYNNNNRTG | 4 cut(s) | 717, 812, 990, 1296 |
| Msp20I | TGGCCA | 1 cut(s) | 1424 |
| MspA1I | CMGCKG | 2 cut(s) | 941, 964 |
| MspCI | CTTAAG | 1 cut(s) | 1631 |
| MspI | CCGG | 7 cut(s) | 224, 425, 791, 905, 921, 1016, 1709 |
| MspR9I | CCNGG | 1 cut(s) | 791 |
| MvnI | CGCG | 3 cut(s) | 653, 1159, 1729 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 648, 1107, 1421 |
| NciI | CCSGG | 1 cut(s) | 791 |
| NcoI | CCATGG | 1 cut(s) | 255 |
| NdeI | CATATG | 2 cut(s) | 831, 1240 |
| NdeII | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| NlaIV | GGNNCC | 1 cut(s) | 589 |
| NmuCI | GTSAC | 4 cut(s) | 781, 823, 888, 1516 |
| NsiI | ATGCAT | 2 cut(s) | 819, 987 |
| NspI | RCATGY | 4 cut(s) | 538, 681, 782, 989 |
| PaeI | GCATGC | 1 cut(s) | 989 |
| PaeR7I | CTCGAG | 1 cut(s) | 375 |
| PceI | AGGCCT | 1 cut(s) | 1110 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 189 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1557 |
| PfeI | GAWTC | 4 cut(s) | 85, 1063, 1225, 1288 |
| PkrI | GCNGC | 6 cut(s) | 160, 313, 748, 943, 1202, 1731 |
| PleI | GAGTC | 3 cut(s) | 401, 484, 691 |
| PpsI | GAGTC | 3 cut(s) | 401, 484, 691 |
| Ppu21I | YACGTR | 1 cut(s) | 1306 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1415 |
| PsiI | TTATAA | 1 cut(s) | 1389 |
| Psp1406I | AACGTT | 1 cut(s) | 53 |
| PspN4I | GGNNCC | 1 cut(s) | 589 |
| PspPI | GGNCC | 5 cut(s) | 748, 902, 907, 1013, 1323 |
| PsuI | RGATCY | 3 cut(s) | 795, 1626, 1691 |
| RsaI | GTAC | 4 cut(s) | 270, 589, 760, 1394 |
| RsaNI | GTAC | 4 cut(s) | 269, 588, 759, 1393 |
| RseI | CAYNNNNRTG | 4 cut(s) | 717, 812, 990, 1296 |
| SaqAI | TTAA | 9 cut(s) | 177, 273, 572, 638, 647, 855, 1079, 1251, 1632 |
| SatI | GCNGC | 6 cut(s) | 159, 312, 747, 942, 1201, 1730 |
| Sau3AI | GATC | 7 cut(s) | 559, 795, 1311, 1318, 1498, 1626, 1691 |
| Sau96I | GGNCC | 5 cut(s) | 748, 902, 907, 1013, 1323 |
| SchI | GAGTC | 3 cut(s) | 401, 485, 691 |
| ScrFI | CCNGG | 1 cut(s) | 791 |
| SfaNI | GCATC | 3 cut(s) | 228, 972, 1110 |
| Sfr274I | CTCGAG | 1 cut(s) | 375 |
| SinI | GGWCC | 3 cut(s) | 907, 1013, 1323 |
| SlaI | CTCGAG | 1 cut(s) | 375 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 717, 812, 990, 1296 |
| SmlI | CTYRAG | 4 cut(s) | 375, 1143, 1406, 1631 |
| SmoI | CTYRAG | 4 cut(s) | 375, 1143, 1406, 1631 |
| SpeI | ACTAGT | 1 cut(s) | 761 |
| SphI | GCATGC | 1 cut(s) | 989 |
| Sse9I | AATT | 3 cut(s) | 7, 874, 1601 |
| SseBI | AGGCCT | 1 cut(s) | 1110 |
| SspI | AATATT | 1 cut(s) | 1381 |
| SspMI | CTAG | 4 cut(s) | 155, 293, 762, 1472 |
| StuI | AGGCCT | 1 cut(s) | 1110 |
| StyD4I | CCNGG | 1 cut(s) | 789 |
| StyI | CCWWGG | 1 cut(s) | 255 |
| TaaI | ACNGT | 2 cut(s) | 143, 850 |
| TaiI | ACGT | 6 cut(s) | 56, 731, 825, 1128, 1281, 1308 |
| TaqI | TCGA | 4 cut(s) | 88, 95, 376, 1374 |
| TaqII | GACCGA | 2 cut(s) | 1016, 1311 |
| TasI | AATT | 3 cut(s) | 7, 874, 1601 |
| TatI | WGTACW | 1 cut(s) | 268 |
| TauI | GCSGC | 4 cut(s) | 161, 314, 749, 1732 |
| TfiI | GAWTC | 4 cut(s) | 85, 1063, 1225, 1288 |
| Tru1I | TTAA | 9 cut(s) | 177, 273, 572, 638, 647, 855, 1079, 1251, 1632 |
| Tru9I | TTAA | 9 cut(s) | 177, 273, 572, 638, 647, 855, 1079, 1251, 1632 |
| TscAI | CASTG | 1 cut(s) | 1015 |
| TseFI | GTSAC | 4 cut(s) | 781, 823, 888, 1516 |
| TseI | GCWGC | 2 cut(s) | 941, 1200 |
| Tsp45I | GTSAC | 4 cut(s) | 781, 823, 888, 1516 |
| TspDTI | ATGAA | 8 cut(s) | 337, 701, 1205, 1223, 1257, 1280, 1509, 1614 |
| TspGWI | ACGGA | 3 cut(s) | 120, 193, 1272 |
| TspRI | CASTG | 1 cut(s) | 1015 |
| Vha464I | CTTAAG | 1 cut(s) | 1631 |
| VpaK11BI | GGWCC | 3 cut(s) | 907, 1013, 1323 |
| XapI | RAATTY | 1 cut(s) | 874 |
| XbaI | TCTAGA | 2 cut(s) | 292, 1471 |
| XceI | RCATGY | 4 cut(s) | 538, 681, 782, 989 |
| XhoI | CTCGAG | 1 cut(s) | 375 |
| XmiI | GTMKAC | 1 cut(s) | 687 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1557 |
| XspI | CTAG | 4 cut(s) | 155, 293, 762, 1472 |
| Zsp2I | ATGCAT | 2 cut(s) | 819, 987 |