Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005363.1

Orthogroup ID

OG0003881

Physical Location & Seq

Genomic Coordinates Forward (+)

89563 .. 91352

Gene Structure 1790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005363.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

atgcttcccaaatgcgatgccaattacgcagctctcacccctacaactttcttgaagagagccgctgcgttttattccaaccgtacttccctcatctacgaaggaactcgcttcacatggcgccaaacacatgaccgttgctgccgtctcgcttcttcccttctttcccttaacattgccaaacacgacgtggtttcggtgttggctcccaatattcctgcattgtatgagatgcatttcgccgtgccgatggctggtgcggtgctcaacaccatcaactctcgacttgatcccaaaaacatcacctccattctgaaacactctggcgccaaggtcttctttgtcgactaccagtacgtccctcaggcgcgtgaggcactcaggattctcatgatgagctctcagccatccatgatgccgttggtcatcgtgatcgacgacatcgactcacccaccggagttcggttgggagaactcgagtacgagcagctcatccacaagggcaatccccggttcgtcggcatcgacgtcgccgacgaatgggacccaatttccttgaattacacttctggcacaacttctgaaccaaaaggtgttgtgtacagccacagaggtgcttacttgagcactctgagcctaattctgggttgggaaatggggggcgagcctgtttatctatggacgctccctatgttccattgcaacggctggaccttcacctggggcgtggcggcacgcggtgggaccaacgtctgcctccgcaacaccaccgcgtacgacatctaccgcaacattaaaagacaccacgtgacccatatgtgttgcgctcccatcattttcaacatactcctcgaggccaagccccacgagcgctgccacatcacaaaccctgttgagatcctcaccggcggagcaccaccaccggctccgctgctcgagaaaatcgagccgcttgggttcaaagtcacccacgcttacggcctgaccgaagcaaccggaccggctctggtttgcgagtggcaggccaagtggaacaagctaccgaaagatgagcaatccaagctgaaagcgaggcaagggataagcatactgactctggctgacgtggacgtgaaggacctggatacaatggcgagtgttccccacgacggcaagaccatgggagagattgtgttgcgtggaagtagcattatgaaaggctacttcaaggacagcgaggccaccaacaaggcattccggaacggctggttcttgacaggagacgtcggcgttatacaccccgatggttacctagaaatcaaggacagatcgaaggacgttattatctccggtggggagaacatcagcagtgtggaattggagagcgtgctctacagacacccaaacgttttggaggcggcggtggtggcaatgccgcaccctcgctggggtgagagtccctgtgcttttgtgaagctcagaagtgacaccaccgtcgtgacggaagctgacatcatcgcctactgtcggaagaatctgccgcactttatggctccgaaaaaggtggagtttatggctgagctgcccaagacttcgaccgggaagattcaaaaattcgagctcagggttagggccaaggcattcaacgtcgtcgaatcaagggatcaacaagtcattgatcctagttacaacgagcagattcttgctttgtcccgtctgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0016143 GO:0016144 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0018858 GO:0019605 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046459 GO:0047760 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

566

Amino Acids

63.11

Weight (kDa)

7.94

Isoelectric Point (pI)

39.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65880 AT1G65890 AT1G66120
fragaria_vesca	FvH4_1g27440 FvH4_1g27450
malus_domestica	MD09G1280400.v1.1 MD17G1287600.v1.1
prunus_persica	Prupe.3G013700_v2.0.a1
pyrus_communis	pycom09g18850 pycom17g27060
rosa_chinensis	RchiOBHm_Chr3g0488561 RchiOBHm_Chr3g0488571
rosa_laevigata	RLG00000022942 RLG00000022943
rosa_multiflora	Rmu_sc0004402.1_g000006 Rmu_sc0004402.1_g000007 Rmu_sc0005363.1_g000024 Rmu_sc0005363.1_g000025
rosa_roxburghii	Rroxscaffold_6G00394130 Rroxscaffold_6G00394140
rosa_rugosa	Rorug03G0239300 Rorug03G0239400
rosa_samantha	Rh3AG288300 Rh3AG288400 Rh3BG325000 Rh3BG325100 Rh3CG322200 Rh3CG322300 Rh3DG321000 Rh3DG321100 Rh4AG012700 Rh7BG359000
rosa_wichuraiana	Rw3G025510 Rw3G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1472
AatII	GACGTC	2 cut(s)	531, 1266
AbsI	CCTCGAGG	1 cut(s)	851
AccB1I	GGYRCC	2 cut(s)	120, 326
AccI	GTMKAC	1 cut(s)	345
AccII	CGCG	3 cut(s)	370, 738, 773
AccIII	TCCGGA	1 cut(s)	1236
AclI	AACGTT	1 cut(s)	1386
AclWI	GGATC	4 cut(s)	284, 892, 1650, 1652
AcsI	RAATTY	1 cut(s)	1592
AcvI	CACGTG	1 cut(s)	808
AcyI	GRCGYC	4 cut(s)	121, 327, 528, 1263
AdeI	CACNNNGTG	3 cut(s)	190, 740, 808
AfaI	GTAC	5 cut(s)	85, 356, 482, 602, 776
AfeI	AGCGCT	1 cut(s)	872
AfiI	CCNNNNNNNGG	9 cut(s)	254, 462, 540, 643, 720, 1148, 1426, 1427, 1506
AgsI	TTSAA	7 cut(s)	55, 559, 841, 961, 1207, 1589, 1624
AjiI	CACGTC	3 cut(s)	190, 1105, 1111
AjnI	CCWGG	2 cut(s)	719, 1119
AjuI	GAANNNNNNNTTGG	2 cut(s)	1217, 1249
AleI	CACNNNNGTG	2 cut(s)	612, 1475
AluBI	AGCT	9 cut(s)	32, 399, 490, 1039, 1063, 1456, 1487, 1561, 1600
AluI	AGCT	9 cut(s)	32, 399, 490, 1039, 1063, 1456, 1487, 1561, 1600
Alw21I	GWGCWC	6 cut(s)	267, 401, 629, 916, 1371, 1602
Alw26I	GTCTC	2 cut(s)	152, 1254
AlwI	GGATC	4 cut(s)	284, 892, 1650, 1652
Ama87I	CYCGRG	3 cut(s)	476, 851, 935
Aor13HI	TCCGGA	1 cut(s)	1236
Aor51HI	AGCGCT	1 cut(s)	872
AoxI	GGCC	5 cut(s)	855, 979, 1023, 1218, 1611
ApeKI	GCWGC	7 cut(s)	29, 65, 141, 487, 873, 931, 1561
ApoI	RAATTY	1 cut(s)	1592
AspLEI	GCGC	5 cut(s)	123, 329, 370, 827, 873
AspS9I	GGNCC	6 cut(s)	544, 711, 744, 998, 1117, 1611
AsuC2I	CCSGG	2 cut(s)	511, 1579
AsuHPI	GGTGA	7 cut(s)	28, 295, 441, 709, 895, 958, 1442
AvaI	CYCGRG	3 cut(s)	476, 851, 935
AvaII	GGWCC	5 cut(s)	544, 711, 744, 998, 1117
AxyI	CCTNAGG	1 cut(s)	363
BanI	GGYRCC	2 cut(s)	120, 326
BanII	GRGCYC	2 cut(s)	401, 1602
BauI	CACGAG	1 cut(s)	866
BbrPI	CACGTG	1 cut(s)	808
BbsI	GAAGAC	1 cut(s)	328
Bbv12I	GWGCWC	6 cut(s)	267, 401, 629, 916, 1371, 1602
BbvI	GCAGC	7 cut(s)	41, 52, 128, 499, 860, 918, 1548
BccI	CCATC	5 cut(s)	244, 281, 415, 839, 1277
BceAI	ACGGC	7 cut(s)	129, 227, 403, 721, 994, 1165, 1258
BcgI	CGANNNNNNTGC	2 cut(s)	511, 545
BciT130I	CCWGG	2 cut(s)	721, 1121
BciVI	GTATCC	1 cut(s)	1117
BcnI	CCSGG	2 cut(s)	511, 1579
BcoDI	GTCTC	2 cut(s)	152, 1254
BfaI	CTAG	2 cut(s)	1292, 1662
BfmI	CTRYAG	1 cut(s)	1372
BfoI	RGCGCY	3 cut(s)	124, 330, 874
BfuI	GTATCC	1 cut(s)	1117
BlpI	GCTNAGC	1 cut(s)	1557
Bme1390I	CCNGG	4 cut(s)	511, 721, 1121, 1579
Bme18I	GGWCC	5 cut(s)	544, 711, 744, 998, 1117
BmeT110I	CYCGRG	3 cut(s)	476, 851, 935
BmgBI	CACGTC	3 cut(s)	190, 1105, 1111
BmgT120I	GGNCC	6 cut(s)	544, 711, 744, 998, 1117, 1611
BmiI	GGNNCC	8 cut(s)	122, 207, 328, 545, 546, 745, 927, 1533
BmrFI	CCNGG	4 cut(s)	511, 721, 1121, 1579
BmsI	GCATC	4 cut(s)	7, 222, 405, 531
BoxI	GACNNNNGTC	1 cut(s)	749
BpiI	GAAGAC	1 cut(s)	328
Bpu10I	CCTNAGC	1 cut(s)	1601
Bpu1102I	GCTNAGC	1 cut(s)	1557
BpuEI	CTTGAG	1 cut(s)	643
BpuMI	CCSGG	2 cut(s)	511, 1579
BsaAI	YACGTR	1 cut(s)	808
BsaHI	GRCGYC	4 cut(s)	121, 327, 528, 1263
BsaJI	CCNNGG	5 cut(s)	330, 509, 720, 1158, 1614
BsaWI	WCCGGW	4 cut(s)	455, 995, 1236, 1328
BsaXI	ACNNNNNCTCC	4 cut(s)	290, 320, 1155, 1185
Bsc4I	CCNNNNNNNGG	9 cut(s)	254, 462, 540, 643, 720, 1148, 1426, 1427, 1506
Bse118I	RCCGGY	3 cut(s)	905, 922, 1000
Bse1I	ACTGG	1 cut(s)	352
Bse21I	CCTNAGG	1 cut(s)	363
Bse3DI	GCAATG	3 cut(s)	174, 697, 1416
BseAI	TCCGGA	1 cut(s)	1236
BseBI	CCWGG	2 cut(s)	721, 1121
BseDI	CCNNGG	5 cut(s)	330, 509, 720, 1158, 1614
BseGI	GGATG	2 cut(s)	407, 492
BseLI	CCNNNNNNNGG	9 cut(s)	254, 462, 540, 643, 720, 1148, 1426, 1427, 1506
BseMI	GCAATG	3 cut(s)	174, 697, 1416
BseMII	CTCAG	7 cut(s)	377, 394, 416, 623, 1471, 1548, 1615
BseNI	ACTGG	1 cut(s)	352
BseRI	GAGGAG	1 cut(s)	839
BseXI	GCAGC	7 cut(s)	41, 52, 128, 499, 860, 918, 1548
BseYI	CCCAGC	1 cut(s)	1425
Bsh1236I	CGCG	3 cut(s)	370, 738, 773
Bsh1285I	CGRYCG	1 cut(s)	1578
BshFI	GGCC	5 cut(s)	857, 981, 1025, 1220, 1613
BshNI	GGYRCC	2 cut(s)	120, 326
BsiEI	CGRYCG	1 cut(s)	1578
BsiHKAI	GWGCWC	6 cut(s)	267, 401, 629, 916, 1371, 1602
BsiHKCI	CYCGRG	3 cut(s)	476, 851, 935
BsiSI	CCGG	9 cut(s)	456, 511, 906, 923, 996, 1001, 1237, 1329, 1578
BsiWI	CGTACG	1 cut(s)	774
BslFI	GGGAC	5 cut(s)	344, 557, 757, 1422, 1675
BslI	CCNNNNNNNGG	9 cut(s)	254, 462, 540, 643, 720, 1148, 1426, 1427, 1506
BsmAI	GTCTC	2 cut(s)	152, 1254
BsmBI	CGTCTC	2 cut(s)	152, 1254
BsmFI	GGGAC	5 cut(s)	344, 557, 757, 1422, 1675
BsmI	GAATGC	2 cut(s)	1232, 1619
BsnI	GGCC	5 cut(s)	857, 981, 1025, 1220, 1613
BsoBI	CYCGRG	3 cut(s)	476, 851, 935
Bsp1286I	GDGCHC	6 cut(s)	267, 401, 629, 916, 1371, 1602
Bsp13I	TCCGGA	1 cut(s)	1236
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
Bsp1720I	GCTNAGC	1 cut(s)	1557
Bsp19I	CCATGG	1 cut(s)	1158
BspANI	GGCC	5 cut(s)	857, 981, 1025, 1220, 1613
BspCNI	CTCAG	7 cut(s)	376, 393, 415, 624, 1470, 1549, 1614
BspEI	TCCGGA	1 cut(s)	1236
BspFNI	CGCG	3 cut(s)	370, 738, 773
BspHI	TCATGA	1 cut(s)	390
BspLI	GGNNCC	8 cut(s)	122, 207, 328, 545, 546, 745, 927, 1533
BspPI	GGATC	4 cut(s)	284, 892, 1650, 1652
BspT107I	GGYRCC	2 cut(s)	120, 326
BsrDI	GCAATG	3 cut(s)	174, 697, 1416
BsrFI	RCCGGY	3 cut(s)	905, 922, 1000
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	1 cut(s)	352
BssAI	RCCGGY	3 cut(s)	905, 922, 1000
BssECI	CCNNGG	5 cut(s)	330, 509, 720, 1158, 1614
BssMI	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
BssNI	GRCGYC	4 cut(s)	121, 327, 528, 1263
BssSI	CACGAG	1 cut(s)	866
BssT1I	CCWWGG	3 cut(s)	330, 1158, 1614
Bst2BI	CACGAG	1 cut(s)	866
Bst2UI	CCWGG	2 cut(s)	721, 1121
Bst4CI	ACNGT	4 cut(s)	83, 137, 1474, 1505
Bst6I	CTCTTC	1 cut(s)	50
BstACI	GRCGYC	4 cut(s)	121, 327, 528, 1263
BstAUI	TGTACA	1 cut(s)	600
BstBAI	YACGTR	1 cut(s)	808
BstC8I	GCNNGC	4 cut(s)	665, 736, 1023, 1367
BstDEI	CTNAG	7 cut(s)	363, 380, 402, 632, 1457, 1557, 1601
BstDSI	CCRYGG	1 cut(s)	1158
BstEII	GGTNACC	1 cut(s)	1286
BstF5I	GGATG	2 cut(s)	407, 492
BstFNI	CGCG	3 cut(s)	370, 738, 773
BstH2I	RGCGCY	3 cut(s)	124, 330, 874
BstHHI	GCGC	5 cut(s)	123, 329, 370, 827, 873
BstKTI	GATC	6 cut(s)	292, 435, 900, 1310, 1645, 1660
BstMAI	GTCTC	2 cut(s)	152, 1254
BstMBI	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
BstMCI	CGRYCG	1 cut(s)	1578
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 374, 633, 868, 1060, 1406
BstNI	CCWGG	2 cut(s)	721, 1121
BstPAI	GACNNNNGTC	1 cut(s)	749
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	4 cut(s)	509, 719, 1119, 1577
BstSFI	CTRYAG	1 cut(s)	1372
BstUI	CGCG	3 cut(s)	370, 738, 773
BstV1I	GCAGC	7 cut(s)	41, 52, 128, 499, 860, 918, 1548
BstV2I	GAAGAC	1 cut(s)	328
BstX2I	RGATCY	1 cut(s)	897
BstYI	RGATCY	1 cut(s)	897
Bsu36I	CCTNAGG	1 cut(s)	363
BsuI	GTATCC	1 cut(s)	1117
BsuRI	GGCC	5 cut(s)	857, 981, 1025, 1220, 1613
BtgI	CCRYGG	1 cut(s)	1158
BtgZI	GCGATG	2 cut(s)	30, 1480
BtrI	CACGTC	3 cut(s)	190, 1105, 1111
BtsCI	GGATG	2 cut(s)	407, 492
BtsI	GCAGTG	1 cut(s)	1354
BtsIMutI	CAGTG	1 cut(s)	1354
Cac8I	GCNNGC	4 cut(s)	665, 736, 1023, 1367
CciI	TCATGA	1 cut(s)	390
CfoI	GCGC	5 cut(s)	123, 329, 370, 827, 873
Cfr10I	RCCGGY	3 cut(s)	905, 922, 1000
Cfr13I	GGNCC	6 cut(s)	544, 711, 744, 998, 1117, 1611
CpoI	CGGWCCG	1 cut(s)	998
CseI	GACGC	1 cut(s)	691
Csp6I	GTAC	5 cut(s)	84, 355, 481, 601, 775
CspI	CGGWCCG	1 cut(s)	998
CviAII	CATG	5 cut(s)	117, 131, 391, 412, 1159
CviQI	GTAC	5 cut(s)	84, 355, 481, 601, 775
DdeI	CTNAG	7 cut(s)	363, 380, 402, 632, 1457, 1557, 1601
DinI	GGCGCC	2 cut(s)	122, 328
DpnI	GATC	6 cut(s)	291, 434, 899, 1309, 1644, 1659
DpnII	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
DraIII	CACNNNGTG	3 cut(s)	190, 740, 808
DrdI	GACNNNNNNGTC	1 cut(s)	1472
DseDI	GACNNNNNNGTC	1 cut(s)	1472
Eam1104I	CTCTTC	1 cut(s)	50
EarI	CTCTTC	1 cut(s)	50
EciI	GGCGGA	1 cut(s)	924
Ecl136II	GAGCTC	2 cut(s)	399, 1600
Eco130I	CCWWGG	3 cut(s)	330, 1158, 1614
Eco24I	GRGCYC	2 cut(s)	401, 1602
Eco47I	GGWCC	5 cut(s)	544, 711, 744, 998, 1117
Eco47III	AGCGCT	1 cut(s)	872
Eco53kI	GAGCTC	2 cut(s)	399, 1600
Eco72I	CACGTG	1 cut(s)	808
Eco81I	CCTNAGG	1 cut(s)	363
Eco88I	CYCGRG	3 cut(s)	476, 851, 935
Eco91I	GGTNACC	1 cut(s)	1286
EcoICRI	GAGCTC	2 cut(s)	399, 1600
EcoO109I	RGGNCCY	2 cut(s)	544, 1117
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRII	CCWGG	2 cut(s)	719, 1119
EcoT14I	CCWWGG	3 cut(s)	330, 1158, 1614
EcoT22I	ATGCAT	1 cut(s)	237
EcoT38I	GRGCYC	2 cut(s)	401, 1602
EgeI	GGCGCC	2 cut(s)	122, 328
EheI	GGCGCC	2 cut(s)	122, 328
ErhI	CCWWGG	3 cut(s)	330, 1158, 1614
Esp3I	CGTCTC	2 cut(s)	152, 1254
FaeI	CATG	5 cut(s)	120, 134, 394, 415, 1162
FalI	AAGNNNNNCTT	2 cut(s)	323, 355
FaqI	GGGAC	5 cut(s)	344, 557, 757, 1422, 1675
FatI	CATG	5 cut(s)	116, 130, 390, 411, 1158
FauNDI	CATATG	1 cut(s)	816
FblI	GTMKAC	1 cut(s)	345
FokI	GGATG	2 cut(s)	394, 479
FriOI	GRGCYC	2 cut(s)	401, 1602
FspBI	CTAG	2 cut(s)	1292, 1662
GlaI	GCGC	5 cut(s)	122, 328, 369, 826, 872
GsaI	CCCAGC	1 cut(s)	1429
HaeII	RGCGCY	3 cut(s)	124, 330, 874
HaeIII	GGCC	5 cut(s)	857, 981, 1025, 1220, 1613
HapII	CCGG	9 cut(s)	456, 511, 906, 923, 996, 1001, 1237, 1329, 1578
HgaI	GACGC	1 cut(s)	691
HhaI	GCGC	5 cut(s)	123, 329, 370, 827, 873
Hin1I	GRCGYC	4 cut(s)	121, 327, 528, 1263
Hin1II	CATG	5 cut(s)	120, 134, 394, 415, 1162
Hin6I	GCGC	5 cut(s)	121, 327, 368, 825, 871
HinP1I	GCGC	5 cut(s)	121, 327, 368, 825, 871
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HinfI	GANTC	8 cut(s)	385, 446, 1093, 1435, 1513, 1585, 1634, 1678
HpaII	CCGG	9 cut(s)	456, 511, 906, 923, 996, 1001, 1237, 1329, 1578
HphI	GGTGA	7 cut(s)	28, 295, 441, 709, 895, 958, 1442
Hpy166II	GTNNAC	3 cut(s)	346, 601, 1108
Hpy188I	TCNGA	6 cut(s)	315, 583, 633, 1460, 1509, 1536
Hpy188III	TCNNGA	9 cut(s)	52, 282, 382, 391, 430, 937, 1237, 1252, 1477
Hpy8I	GTNNAC	3 cut(s)	346, 601, 1108
HpyAV	CCTTC	5 cut(s)	95, 170, 724, 1108, 1306
HpyCH4III	ACNGT	4 cut(s)	83, 137, 1474, 1505
HpyCH4V	TGCA	3 cut(s)	221, 235, 702
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 374, 633, 868, 1060, 1406
HpyF3I	CTNAG	7 cut(s)	363, 380, 402, 632, 1457, 1557, 1601
Hsp92I	GRCGYC	4 cut(s)	121, 327, 528, 1263
Hsp92II	CATG	5 cut(s)	120, 134, 394, 415, 1162
HspAI	GCGC	5 cut(s)	121, 327, 368, 825, 871
KasI	GGCGCC	2 cut(s)	120, 326
KflI	GGGWCCC	1 cut(s)	544
Kpn2I	TCCGGA	1 cut(s)	1236
Kzo9I	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
LmnI	GCTCC	6 cut(s)	211, 690, 832, 911, 931, 1537
Lsp1109I	GCAGC	7 cut(s)	41, 52, 128, 499, 860, 918, 1548
LweI	GCATC	4 cut(s)	7, 222, 405, 531
MaeI	CTAG	2 cut(s)	1292, 1662
MaeIII	GTNAC	6 cut(s)	808, 964, 1286, 1463, 1477, 1664
MalI	GATC	6 cut(s)	291, 434, 899, 1309, 1644, 1659
MboI	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
MboII	GAAGA	5 cut(s)	67, 147, 328, 1522, 1594
MflI	RGATCY	1 cut(s)	897
MhlI	GDGCHC	6 cut(s)	267, 401, 629, 916, 1371, 1602
MluCI	AATT	6 cut(s)	22, 549, 559, 639, 1355, 1592
Mly113I	GGCGCC	2 cut(s)	121, 327
MlyI	GAGTC	3 cut(s)	440, 1087, 1444
MmeI	TCCRAC	2 cut(s)	102, 1487
Mph1103I	ATGCAT	1 cut(s)	237
MroI	TCCGGA	1 cut(s)	1236
MseI	TTAA	2 cut(s)	171, 795
MslI	CAYNNNNRTG	3 cut(s)	612, 1281, 1475
MspA1I	CMGCKG	2 cut(s)	65, 931
MspI	CCGG	9 cut(s)	456, 511, 906, 923, 996, 1001, 1237, 1329, 1578
MspR9I	CCNGG	4 cut(s)	511, 721, 1121, 1579
Mva1269I	GAATGC	2 cut(s)	1232, 1619
MvaI	CCWGG	2 cut(s)	721, 1121
MvnI	CGCG	3 cut(s)	370, 738, 773
MwoI	GCNNNNNNNGC	6 cut(s)	26, 374, 633, 868, 1060, 1406
NarI	GGCGCC	2 cut(s)	121, 327
NciI	CCSGG	2 cut(s)	511, 1579
NcoI	CCATGG	1 cut(s)	1158
NdeI	CATATG	1 cut(s)	816
NdeII	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
NlaIII	CATG	5 cut(s)	120, 134, 394, 415, 1162
NlaIV	GGNNCC	8 cut(s)	122, 207, 328, 545, 546, 745, 927, 1533
NmuCI	GTSAC	4 cut(s)	808, 964, 1463, 1477
NsiI	ATGCAT	1 cut(s)	237
OliI	CACNNNNGTG	2 cut(s)	612, 1475
PaeR7I	CTCGAG	3 cut(s)	476, 851, 935
PagI	TCATGA	1 cut(s)	390
PcsI	WCGNNNNNNNCGW	8 cut(s)	435, 441, 522, 525, 531, 534, 942, 984
PctI	GAATGC	2 cut(s)	1232, 1619
PfeI	GAWTC	5 cut(s)	385, 1513, 1585, 1634, 1678
Pfl23II	CGTACG	1 cut(s)	774
PleI	GAGTC	3 cut(s)	440, 1087, 1443
PluTI	GGCGCC	2 cut(s)	124, 330
PmaCI	CACGTG	1 cut(s)	808
PmlI	CACGTG	1 cut(s)	808
PpsI	GAGTC	3 cut(s)	440, 1087, 1443
Ppu21I	YACGTR	1 cut(s)	808
PpuMI	RGGWCCY	2 cut(s)	544, 1117
PshAI	GACNNNNGTC	1 cut(s)	749
Psp124BI	GAGCTC	2 cut(s)	401, 1602
Psp1406I	AACGTT	1 cut(s)	1386
Psp5II	RGGWCCY	2 cut(s)	544, 1117
Psp6I	CCWGG	2 cut(s)	719, 1119
PspCI	CACGTG	1 cut(s)	808
PspEI	GGTNACC	1 cut(s)	1286
PspFI	CCCAGC	1 cut(s)	1425
PspGI	CCWGG	2 cut(s)	719, 1119
PspLI	CGTACG	1 cut(s)	774
PspN4I	GGNNCC	8 cut(s)	122, 207, 328, 545, 546, 745, 927, 1533
PspPI	GGNCC	6 cut(s)	544, 711, 744, 998, 1117, 1611
PspPPI	RGGWCCY	2 cut(s)	544, 1117
PspXI	VCTCGAGB	2 cut(s)	476, 851
PsuI	RGATCY	1 cut(s)	897
RsaI	GTAC	5 cut(s)	85, 356, 482, 602, 776
RsaNI	GTAC	5 cut(s)	84, 355, 481, 601, 775
RseI	CAYNNNNRTG	3 cut(s)	612, 1281, 1475
Rsr2I	CGGWCCG	1 cut(s)	998
RsrII	CGGWCCG	1 cut(s)	998
SacI	GAGCTC	2 cut(s)	401, 1602
SalI	GTCGAC	1 cut(s)	344
SaqAI	TTAA	2 cut(s)	171, 795
Sau3AI	GATC	6 cut(s)	289, 432, 897, 1307, 1642, 1657
Sau96I	GGNCC	6 cut(s)	544, 711, 744, 998, 1117, 1611
SchI	GAGTC	3 cut(s)	440, 1087, 1444
ScrFI	CCNGG	4 cut(s)	511, 721, 1121, 1579
SduI	GDGCHC	6 cut(s)	267, 401, 629, 916, 1371, 1602
SfaNI	GCATC	4 cut(s)	7, 222, 405, 531
SfcI	CTRYAG	1 cut(s)	1372
SfoI	GGCGCC	2 cut(s)	122, 328
Sfr274I	CTCGAG	3 cut(s)	476, 851, 935
SgrAI	CRCCGGYG	1 cut(s)	905
SinI	GGWCC	5 cut(s)	544, 711, 744, 998, 1117
SlaI	CTCGAG	3 cut(s)	476, 851, 935
SmiMI	CAYNNNNRTG	3 cut(s)	612, 1281, 1475
SmlI	CTYRAG	4 cut(s)	476, 622, 851, 935
SmoI	CTYRAG	4 cut(s)	476, 622, 851, 935
Sse9I	AATT	6 cut(s)	22, 549, 559, 639, 1355, 1592
SspDI	GGCGCC	2 cut(s)	120, 326
SspI	AATATT	1 cut(s)	214
SspMI	CTAG	2 cut(s)	1292, 1662
SstI	GAGCTC	2 cut(s)	401, 1602
StyD4I	CCNGG	4 cut(s)	509, 719, 1119, 1577
StyI	CCWWGG	3 cut(s)	330, 1158, 1614
TaaI	ACNGT	4 cut(s)	83, 137, 1474, 1505
TaqII	GACCGA	1 cut(s)	1001
TasI	AATT	6 cut(s)	22, 549, 559, 639, 1355, 1592
TatI	WGTACW	1 cut(s)	600
TauI	GCSGC	6 cut(s)	65, 734, 952, 1400, 1417, 1522
TfiI	GAWTC	5 cut(s)	385, 1513, 1585, 1634, 1678
Tru1I	TTAA	2 cut(s)	171, 795
Tru9I	TTAA	2 cut(s)	171, 795
TscAI	CASTG	1 cut(s)	1354
TseFI	GTSAC	4 cut(s)	808, 964, 1463, 1477
TseI	GCWGC	7 cut(s)	29, 65, 141, 487, 873, 931, 1561
Tsp45I	GTSAC	4 cut(s)	808, 964, 1463, 1477
TspDTI	ATGAA	1 cut(s)	1208
TspGWI	ACGGA	1 cut(s)	1496
TspRI	CASTG	1 cut(s)	1354
VpaK11BI	GGWCC	5 cut(s)	544, 711, 744, 998, 1117
XapI	RAATTY	1 cut(s)	1592
XcmI	CCANNNNNNNNNTGG	2 cut(s)	187, 418
XhoI	CTCGAG	3 cut(s)	476, 851, 935
XmiI	GTMKAC	1 cut(s)	345
XspI	CTAG	2 cut(s)	1292, 1662
ZraI	GACGTC	2 cut(s)	529, 1264
Zsp2I	ATGCAT	1 cut(s)	237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.