Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005363.1

Orthogroup ID

OG0003881

Physical Location & Seq

Genomic Coordinates Forward (+)

85479 .. 87302

Gene Structure 1824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005363.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

atgaatatgcttcccaaatgtgaagccaattacgctgctctcaccccaacgactttcttgaagagagccgcggcgttttatgctaaccgcacctccctcatctacgaaggcactcgcttcacatggcgccaaacctatgaccgctgctcccgtctcgcatcctctcttgtttgtctcaacattgtcaagcatgatgttgtatcagttctggctcctaatgttccggcaatgtatgagatgcactttgcagtgcccatggctggtgcggtgctcaacaccatcaacacccgccttgatgcgaagaacatagcttccattctcaaacactcaggcgccaagatcttctttgtggactgccagttcgtcccggtggcgcgtgaggctctcaaaatccttatgaacaattccgagctctccatgatgccgttggtcatcgtgattgatgacatcgactcacccacaggtgttcgattgggcgaactggagtatgaacaactcatccacaagggcaatcccgggtttacctccgtcgagcttgacgacgagtgggacccaatcgctttgaattacacttctggcacgacgtctgaacccaaaggcgttgtgtacagccacagaggtgcttacttgagcactttaagcctaatcttgggttgggaaatggggagcgagcctgtttatctatggacgctccctatgttccactgcaacggctggaccttcacttggggtgtggcggcacgcggcggaaccaacgtctgcctccgaaacaccaccgcgtacgatatctaccgcaacatcaaacgacaccaggtcacccacatgtgctgtgctcccatcatcttcaacattctcctcgaggccaaaccccacgagcgctgcgagatcgtctcccctattcagatacttaccggtggagcaccacccccagctccgctgctggagaaaatcgagccgttgggtttcaaggtgacacatgcatatggcctgactgaagcaaccggaccggctttggtttgcgagtggcaggccaagtggaacaagcttcccaaggaggaacaatcaaatcttaaagcaaggcaaggaataagcattttgactctggctgatgttgacgtgaaggacccggaaacaatggagagtgttcctcacgacggcaaaaccatgggggagattgtgctgcgtgggagtagcatcatgaagggttacttcaaggacccaaaggccaccaacaaagcgttcaagcacggctggttcttcaccggcgacgtcggtgttatccacccagatggttatttggagatcaaagacagatcgaaagacgtgatcatatcaggtggggagaacattagtagtgtagaattggagaccgtgctttacagacaccccaacattctggaagctgctgtggtggcaatgcctcacccacggtggggagagactccttgtgctttcgtggcccttagaaacaacgactctaacgtgaaagtaagcaagtctgatatcatcagttattgtcggaagaacttgccgcattttatggttccgaaaaaggttgagtttgtgcctgaactgcccaaaaattcaaccgggaagattctcaagttcgagctgagggaatgggcaaaggcctttgaaccggtcgacgtatcggaaaatcagcagcaagccgtcatggattctcacccttctcgctataacgagcagactctggctttctcccggctttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0016143 GO:0016144 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0018858 GO:0019605 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046459 GO:0047760 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

576

Amino Acids

64.37

Weight (kDa)

6.79

Isoelectric Point (pI)

37.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65880 AT1G65890 AT1G66120
fragaria_vesca	FvH4_1g27440 FvH4_1g27450
malus_domestica	MD09G1280400.v1.1 MD17G1287600.v1.1
prunus_persica	Prupe.3G013700_v2.0.a1
pyrus_communis	pycom09g18850 pycom17g27060
rosa_chinensis	RchiOBHm_Chr3g0488561 RchiOBHm_Chr3g0488571
rosa_laevigata	RLG00000022942 RLG00000022943
rosa_multiflora	Rmu_sc0004402.1_g000006 Rmu_sc0004402.1_g000007 Rmu_sc0005363.1_g000024 Rmu_sc0005363.1_g000025
rosa_roxburghii	Rroxscaffold_6G00394130 Rroxscaffold_6G00394140
rosa_rugosa	Rorug03G0239300 Rorug03G0239400
rosa_samantha	Rh3AG288300 Rh3AG288400 Rh3BG325000 Rh3BG325100 Rh3CG322200 Rh3CG322300 Rh3DG321000 Rh3DG321100 Rh4AG012700 Rh7BG359000
rosa_wichuraiana	Rw3G025510 Rw3G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	587, 1272
AbsI	CCTCGAGG	1 cut(s)	857
AccB1I	GGYRCC	2 cut(s)	126, 332
AccI	GTMKAC	1 cut(s)	1644
AccII	CGCG	4 cut(s)	71, 376, 744, 779
AcsI	RAATTY	1 cut(s)	1582
AcuI	CTGAAG	1 cut(s)	1014
AcyI	GRCGYC	4 cut(s)	127, 333, 584, 1269
AfaI	GTAC	2 cut(s)	608, 782
AfeI	AGCGCT	1 cut(s)	878
AfiI	CCNNNNNNNGG	6 cut(s)	260, 649, 726, 1154, 1432, 1433
AflIII	ACRYGT	1 cut(s)	822
AgeI	ACCGGT	2 cut(s)	911, 1639
AgsI	TTSAA	8 cut(s)	61, 565, 847, 967, 1213, 1243, 1587, 1637
AhdI	GACNNNNNGTC	1 cut(s)	812
AjiI	CACGTC	2 cut(s)	1117, 1324
AjnI	CCWGG	1 cut(s)	810
AjuI	GAANNNNNNNTTGG	2 cut(s)	1223, 1255
AleI	CACNNNNGTG	1 cut(s)	618
AloI	GAACNNNNNNTCC	6 cut(s)	296, 328, 344, 376, 483, 515
AluBI	AGCT	7 cut(s)	311, 412, 535, 932, 1045, 1403, 1612
AluI	AGCT	7 cut(s)	311, 412, 535, 932, 1045, 1403, 1612
Alw21I	GWGCWC	5 cut(s)	273, 414, 635, 835, 922
Alw26I	GTCTC	5 cut(s)	158, 179, 895, 1361, 1433
AlwNI	CAGNNNCTG	1 cut(s)	1711
Ama87I	CYCGRG	2 cut(s)	515, 857
Aor51HI	AGCGCT	1 cut(s)	878
AoxI	GGCC	6 cut(s)	861, 985, 1029, 1224, 1458, 1629
ApeKI	GCWGC	7 cut(s)	35, 144, 879, 937, 1180, 1403, 1663
ApoI	RAATTY	1 cut(s)	1582
ArsI	GACNNNNNNTTYG	2 cut(s)	344, 376
AsiGI	ACCGGT	2 cut(s)	911, 1639
AspLEI	GCGC	4 cut(s)	129, 335, 376, 879
AspS9I	GGNCC	6 cut(s)	550, 717, 1004, 1123, 1216, 1459
AsuC2I	CCSGG	6 cut(s)	368, 516, 517, 1127, 1591, 1723
AsuHPI	GGTGA	7 cut(s)	34, 447, 808, 982, 1252, 1415, 1676
AvaI	CYCGRG	2 cut(s)	515, 857
AvaII	GGWCC	5 cut(s)	550, 717, 1004, 1123, 1216
BaeGI	GKGCMC	1 cut(s)	255
BanI	GGYRCC	2 cut(s)	126, 332
BanII	GRGCYC	1 cut(s)	414
BauI	CACGAG	1 cut(s)	872
Bbv12I	GWGCWC	5 cut(s)	273, 414, 635, 835, 922
BbvCI	CCTCAGC	1 cut(s)	1613
BbvI	GCAGC	7 cut(s)	22, 131, 866, 924, 1167, 1390, 1675
BccI	CCATC	3 cut(s)	287, 845, 1283
BceAI	ACGGC	6 cut(s)	409, 727, 940, 1171, 1264, 1655
BciT130I	CCWGG	1 cut(s)	812
BclI	TGATCA	1 cut(s)	1326
BcnI	CCSGG	6 cut(s)	368, 516, 517, 1127, 1591, 1723
BcoDI	GTCTC	5 cut(s)	158, 179, 895, 1361, 1433
BfoI	RGCGCY	3 cut(s)	130, 336, 880
BglII	AGATCT	1 cut(s)	339
Bme1390I	CCNGG	7 cut(s)	368, 516, 517, 812, 1127, 1591, 1723
Bme18I	GGWCC	5 cut(s)	550, 717, 1004, 1123, 1216
BmeRI	GACNNNNNGTC	1 cut(s)	812
BmeT110I	CYCGRG	2 cut(s)	515, 857
BmgBI	CACGTC	2 cut(s)	1117, 1324
BmgT120I	GGNCC	6 cut(s)	550, 717, 1004, 1123, 1216, 1459
BmiI	GGNNCC	9 cut(s)	128, 213, 334, 551, 552, 751, 1125, 1218, 1545
BmrFI	CCNGG	7 cut(s)	368, 516, 517, 812, 1127, 1591, 1723
BmsI	GCATC	5 cut(s)	167, 228, 286, 411, 1203
BplI	GAGNNNNNCTC	4 cut(s)	875, 907, 1132, 1164
BpmI	CTGGAG	2 cut(s)	503, 962
Bpu10I	CCTNAGC	1 cut(s)	1613
BpuEI	CTTGAG	2 cut(s)	649, 1586
BpuMI	CCSGG	6 cut(s)	368, 516, 517, 1127, 1591, 1723
BsaHI	GRCGYC	4 cut(s)	127, 333, 584, 1269
BsaI	GGTCTC	1 cut(s)	1361
BsaJI	CCNNGG	6 cut(s)	69, 255, 515, 1050, 1164, 1427
BsaWI	WCCGGW	3 cut(s)	911, 1001, 1639
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 131, 161
Bsc4I	CCNNNNNNNGG	6 cut(s)	260, 649, 726, 1154, 1432, 1433
Bse118I	RCCGGY	4 cut(s)	911, 1006, 1262, 1639
Bse1I	ACTGG	2 cut(s)	358, 486
Bse3DI	GCAATG	2 cut(s)	234, 1422
BseBI	CCWGG	1 cut(s)	812
BseDI	CCNNGG	6 cut(s)	69, 255, 515, 1050, 1164, 1427
BseGI	GGATG	2 cut(s)	158, 498
BseLI	CCNNNNNNNGG	6 cut(s)	260, 649, 726, 1154, 1432, 1433
BseMI	GCAATG	2 cut(s)	234, 1422
BseMII	CTCAG	2 cut(s)	342, 1604
BseNI	ACTGG	2 cut(s)	358, 486
BseRI	GAGGAG	1 cut(s)	845
BseSI	GKGCMC	1 cut(s)	255
BseXI	GCAGC	7 cut(s)	22, 131, 866, 924, 1167, 1390, 1675
BseYI	CCCAGC	1 cut(s)	928
Bsh1236I	CGCG	4 cut(s)	71, 376, 744, 779
Bsh1285I	CGRYCG	1 cut(s)	1644
BshFI	GGCC	6 cut(s)	863, 987, 1031, 1226, 1460, 1631
BshNI	GGYRCC	2 cut(s)	126, 332
BshTI	ACCGGT	2 cut(s)	911, 1639
BsiEI	CGRYCG	1 cut(s)	1644
BsiHKAI	GWGCWC	5 cut(s)	273, 414, 635, 835, 922
BsiHKCI	CYCGRG	2 cut(s)	515, 857
BsiWI	CGTACG	1 cut(s)	780
BslFI	GGGAC	2 cut(s)	350, 563
BslI	CCNNNNNNNGG	6 cut(s)	260, 649, 726, 1154, 1432, 1433
BsmAI	GTCTC	5 cut(s)	158, 179, 895, 1361, 1433
BsmBI	CGTCTC	2 cut(s)	158, 895
BsmFI	GGGAC	2 cut(s)	350, 563
BsnI	GGCC	6 cut(s)	863, 987, 1031, 1226, 1460, 1631
Bso31I	GGTCTC	1 cut(s)	1361
BsoBI	CYCGRG	2 cut(s)	515, 857
Bsp1286I	GDGCHC	6 cut(s)	255, 273, 414, 635, 835, 922
Bsp1407I	TGTACA	1 cut(s)	606
Bsp143I	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
Bsp19I	CCATGG	2 cut(s)	255, 1164
BspANI	GGCC	6 cut(s)	863, 987, 1031, 1226, 1460, 1631
BspCNI	CTCAG	2 cut(s)	341, 1605
BspFNI	CGCG	4 cut(s)	71, 376, 744, 779
BspHI	TCATGA	1 cut(s)	1197
BspLI	GGNNCC	9 cut(s)	128, 213, 334, 551, 552, 751, 1125, 1218, 1545
BspT107I	GGYRCC	2 cut(s)	126, 332
BspTNI	GGTCTC	1 cut(s)	1361
BsrDI	GCAATG	2 cut(s)	234, 1422
BsrFI	RCCGGY	4 cut(s)	911, 1006, 1262, 1639
BsrGI	TGTACA	1 cut(s)	606
BsrI	ACTGG	2 cut(s)	358, 486
BssAI	RCCGGY	4 cut(s)	911, 1006, 1262, 1639
BssECI	CCNNGG	6 cut(s)	69, 255, 515, 1050, 1164, 1427
BssMI	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
BssNI	GRCGYC	4 cut(s)	127, 333, 584, 1269
BssSI	CACGAG	1 cut(s)	872
BssT1I	CCWWGG	3 cut(s)	255, 1050, 1164
Bst2BI	CACGAG	1 cut(s)	872
Bst2UI	CCWGG	1 cut(s)	812
Bst4CI	ACNGT	2 cut(s)	1372, 1431
Bst6I	CTCTTC	1 cut(s)	56
BstACI	GRCGYC	4 cut(s)	127, 333, 584, 1269
BstAUI	TGTACA	1 cut(s)	606
BstC8I	GCNNGC	4 cut(s)	671, 742, 1029, 1668
BstDEI	CTNAG	3 cut(s)	328, 1463, 1613
BstDSI	CCRYGG	4 cut(s)	69, 255, 1164, 1427
BstEII	GGTNACC	1 cut(s)	814
BstF5I	GGATG	2 cut(s)	158, 498
BstFNI	CGCG	4 cut(s)	71, 376, 744, 779
BstH2I	RGCGCY	3 cut(s)	130, 336, 880
BstHHI	GCGC	4 cut(s)	129, 335, 376, 879
BstKTI	GATC	5 cut(s)	342, 888, 1305, 1316, 1329
BstMAI	GTCTC	5 cut(s)	158, 179, 895, 1361, 1433
BstMBI	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
BstMCI	CGRYCG	1 cut(s)	1644
BstMWI	GCNNNNNNNGC	7 cut(s)	32, 80, 380, 639, 1412, 1457, 1573
BstNI	CCWGG	1 cut(s)	812
BstNSI	RCATGY	2 cut(s)	826, 980
BstPI	GGTNACC	1 cut(s)	814
BstSCI	CCNGG	7 cut(s)	366, 514, 515, 810, 1125, 1589, 1721
BstSLI	GKGCMC	1 cut(s)	255
BstUI	CGCG	4 cut(s)	71, 376, 744, 779
BstV1I	GCAGC	7 cut(s)	22, 131, 866, 924, 1167, 1390, 1675
BstX2I	RGATCY	1 cut(s)	339
BstXI	CCANNNNNNTGG	2 cut(s)	1289, 1396
BstYI	RGATCY	1 cut(s)	339
BsuRI	GGCC	6 cut(s)	863, 987, 1031, 1226, 1460, 1631
BtgI	CCRYGG	4 cut(s)	69, 255, 1164, 1427
BtrI	CACGTC	2 cut(s)	1117, 1324
BtsCI	GGATG	2 cut(s)	158, 498
BtsI	GCAGTG	2 cut(s)	255, 703
BtsIMutI	CAGTG	2 cut(s)	255, 703
Cac8I	GCNNGC	4 cut(s)	671, 742, 1029, 1668
CaiI	CAGNNNCTG	1 cut(s)	1711
CciI	TCATGA	1 cut(s)	1197
CfoI	GCGC	4 cut(s)	129, 335, 376, 879
Cfr10I	RCCGGY	4 cut(s)	911, 1006, 1262, 1639
Cfr13I	GGNCC	6 cut(s)	550, 717, 1004, 1123, 1216, 1459
Cfr42I	CCGCGG	1 cut(s)	72
Cfr9I	CCCGGG	1 cut(s)	515
CpoI	CGGWCCG	1 cut(s)	1004
CseI	GACGC	1 cut(s)	697
CsiI	ACCWGGT	1 cut(s)	810
Csp6I	GTAC	2 cut(s)	607, 781
CspAI	ACCGGT	2 cut(s)	911, 1639
CspI	CGGWCCG	1 cut(s)	1004
CviAII	CATG	9 cut(s)	123, 191, 256, 418, 823, 977, 1165, 1198, 1675
CviQI	GTAC	2 cut(s)	607, 781
DdeI	CTNAG	3 cut(s)	328, 1463, 1613
DinI	GGCGCC	2 cut(s)	128, 334
DpnI	GATC	5 cut(s)	341, 887, 1304, 1315, 1328
DpnII	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
DriI	GACNNNNNGTC	1 cut(s)	812
Eam1104I	CTCTTC	1 cut(s)	56
Eam1105I	GACNNNNNGTC	1 cut(s)	812
EarI	CTCTTC	1 cut(s)	56
EciI	GGCGGA	1 cut(s)	762
Ecl136II	GAGCTC	1 cut(s)	412
Eco130I	CCWWGG	3 cut(s)	255, 1050, 1164
Eco147I	AGGCCT	1 cut(s)	1631
Eco24I	GRGCYC	1 cut(s)	414
Eco31I	GGTCTC	1 cut(s)	1361
Eco32I	GATATC	2 cut(s)	787, 1504
Eco47I	GGWCC	5 cut(s)	550, 717, 1004, 1123, 1216
Eco47III	AGCGCT	1 cut(s)	878
Eco53kI	GAGCTC	1 cut(s)	412
Eco57I	CTGAAG	1 cut(s)	1014
Eco88I	CYCGRG	2 cut(s)	515, 857
Eco91I	GGTNACC	1 cut(s)	814
EcoICRI	GAGCTC	1 cut(s)	412
EcoO109I	RGGNCCY	3 cut(s)	550, 1123, 1216
EcoO65I	GGTNACC	1 cut(s)	814
EcoRII	CCWGG	1 cut(s)	810
EcoRV	GATATC	2 cut(s)	787, 1504
EcoT14I	CCWWGG	3 cut(s)	255, 1050, 1164
EcoT22I	ATGCAT	1 cut(s)	982
EcoT38I	GRGCYC	1 cut(s)	414
EgeI	GGCGCC	2 cut(s)	128, 334
EheI	GGCGCC	2 cut(s)	128, 334
ErhI	CCWWGG	3 cut(s)	255, 1050, 1164
Esp3I	CGTCTC	2 cut(s)	158, 895
FaeI	CATG	9 cut(s)	126, 194, 259, 421, 826, 980, 1168, 1201, 1678
FalI	AAGNNNNNCTT	4 cut(s)	329, 361, 1193, 1225
FaqI	GGGAC	2 cut(s)	350, 563
FatI	CATG	9 cut(s)	122, 190, 255, 417, 822, 976, 1164, 1197, 1674
FauI	CCCGC	1 cut(s)	296
FauNDI	CATATG	1 cut(s)	982
FbaI	TGATCA	1 cut(s)	1326
FblI	GTMKAC	1 cut(s)	1644
FokI	GGATG	2 cut(s)	145, 485
FriOI	GRGCYC	1 cut(s)	414
GlaI	GCGC	4 cut(s)	128, 334, 375, 878
GsaI	CCCAGC	1 cut(s)	932
GsuI	CTGGAG	2 cut(s)	503, 962
HaeII	RGCGCY	3 cut(s)	130, 336, 880
HaeIII	GGCC	6 cut(s)	863, 987, 1031, 1226, 1460, 1631
HgaI	GACGC	1 cut(s)	697
HhaI	GCGC	4 cut(s)	129, 335, 376, 879
Hin1I	GRCGYC	4 cut(s)	127, 333, 584, 1269
Hin1II	CATG	9 cut(s)	126, 194, 259, 421, 826, 980, 1168, 1201, 1678
Hin6I	GCGC	4 cut(s)	127, 333, 374, 877
HinP1I	GCGC	4 cut(s)	127, 333, 374, 877
HincII	GTYRAC	2 cut(s)	1114, 1645
HindII	GTYRAC	2 cut(s)	1114, 1645
HindIII	AAGCTT	1 cut(s)	1043
HinfI	GANTC	7 cut(s)	452, 1099, 1441, 1475, 1597, 1679, 1708
HphI	GGTGA	7 cut(s)	34, 447, 808, 982, 1252, 1415, 1676
Hpy166II	GTNNAC	5 cut(s)	352, 522, 607, 1114, 1645
Hpy188I	TCNGA	8 cut(s)	409, 589, 767, 903, 1501, 1521, 1548, 1654
Hpy188III	TCNNGA	5 cut(s)	58, 436, 1151, 1198, 1397
Hpy8I	GTNNAC	5 cut(s)	352, 522, 607, 1114, 1645
Hpy99I	CGWCG	7 cut(s)	533, 545, 586, 1157, 1271, 1274, 1649
HpyAV	CCTTC	5 cut(s)	101, 730, 1114, 1195, 1698
HpyCH4III	ACNGT	2 cut(s)	1372, 1431
HpyCH4IV	ACGT	7 cut(s)	584, 756, 1116, 1269, 1323, 1482, 1647
HpyCH4V	TGCA	4 cut(s)	241, 248, 708, 980
HpyF10VI	GCNNNNNNNGC	7 cut(s)	32, 80, 380, 639, 1412, 1457, 1573
HpyF3I	CTNAG	3 cut(s)	328, 1463, 1613
HpySE526I	ACGT	7 cut(s)	584, 756, 1116, 1269, 1323, 1482, 1647
Hsp92I	GRCGYC	4 cut(s)	127, 333, 584, 1269
Hsp92II	CATG	9 cut(s)	126, 194, 259, 421, 826, 980, 1168, 1201, 1678
HspAI	GCGC	4 cut(s)	127, 333, 374, 877
KasI	GGCGCC	2 cut(s)	126, 332
KflI	GGGWCCC	1 cut(s)	550
Ksp22I	TGATCA	1 cut(s)	1326
KspI	CCGCGG	1 cut(s)	72
Kzo9I	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
LmnI	GCTCC	7 cut(s)	152, 217, 666, 696, 838, 917, 937
Lsp1109I	GCAGC	7 cut(s)	22, 131, 866, 924, 1167, 1390, 1675
LweI	GCATC	5 cut(s)	167, 228, 286, 411, 1203
MabI	ACCWGGT	1 cut(s)	810
MaeII	ACGT	7 cut(s)	584, 756, 1116, 1269, 1323, 1482, 1647
MaeIII	GTNAC	3 cut(s)	814, 970, 1205
MalI	GATC	5 cut(s)	341, 887, 1304, 1315, 1328
MboI	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
MboII	GAAGA	7 cut(s)	73, 313, 334, 835, 1249, 1534, 1606
MflI	RGATCY	1 cut(s)	339
MhlI	GDGCHC	6 cut(s)	255, 273, 414, 635, 835, 922
MluCI	AATT	5 cut(s)	28, 403, 565, 1361, 1582
Mly113I	GGCGCC	2 cut(s)	127, 333
MlyI	GAGTC	5 cut(s)	446, 1093, 1435, 1469, 1702
MmeI	TCCRAC	1 cut(s)	1499
Mph1103I	ATGCAT	1 cut(s)	982
MseI	TTAA	3 cut(s)	638, 1071, 1729
MslI	CAYNNNNRTG	4 cut(s)	618, 821, 981, 1287
MspA1I	CMGCKG	3 cut(s)	71, 144, 937
MspR9I	CCNGG	7 cut(s)	368, 516, 517, 812, 1127, 1591, 1723
MvaI	CCWGG	1 cut(s)	812
MvnI	CGCG	4 cut(s)	71, 376, 744, 779
MwoI	GCNNNNNNNGC	7 cut(s)	32, 80, 380, 639, 1412, 1457, 1573
NarI	GGCGCC	2 cut(s)	127, 333
NciI	CCSGG	6 cut(s)	368, 516, 517, 1127, 1591, 1723
NcoI	CCATGG	2 cut(s)	255, 1164
NdeI	CATATG	1 cut(s)	982
NdeII	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
NlaIII	CATG	9 cut(s)	126, 194, 259, 421, 826, 980, 1168, 1201, 1678
NlaIV	GGNNCC	9 cut(s)	128, 213, 334, 551, 552, 751, 1125, 1218, 1545
NmuCI	GTSAC	2 cut(s)	814, 970
NsiI	ATGCAT	1 cut(s)	982
NspI	RCATGY	2 cut(s)	826, 980
OliI	CACNNNNGTG	1 cut(s)	618
PaeR7I	CTCGAG	1 cut(s)	857
PagI	TCATGA	1 cut(s)	1197
PceI	AGGCCT	1 cut(s)	1631
PciI	ACATGT	1 cut(s)	822
PcsI	WCGNNNNNNNCGW	3 cut(s)	537, 879, 1479
PfeI	GAWTC	2 cut(s)	1597, 1679
Pfl23II	CGTACG	1 cut(s)	780
PinAI	ACCGGT	2 cut(s)	911, 1639
PleI	GAGTC	5 cut(s)	446, 1093, 1435, 1469, 1702
PluTI	GGCGCC	2 cut(s)	130, 336
PpsI	GAGTC	5 cut(s)	446, 1093, 1435, 1469, 1702
PpuMI	RGGWCCY	3 cut(s)	550, 1123, 1216
PscI	ACATGT	1 cut(s)	822
Psp124BI	GAGCTC	1 cut(s)	414
Psp5II	RGGWCCY	3 cut(s)	550, 1123, 1216
Psp6I	CCWGG	1 cut(s)	810
PspEI	GGTNACC	1 cut(s)	814
PspFI	CCCAGC	1 cut(s)	928
PspGI	CCWGG	1 cut(s)	810
PspLI	CGTACG	1 cut(s)	780
PspN4I	GGNNCC	9 cut(s)	128, 213, 334, 551, 552, 751, 1125, 1218, 1545
PspPI	GGNCC	6 cut(s)	550, 717, 1004, 1123, 1216, 1459
PspPPI	RGGWCCY	3 cut(s)	550, 1123, 1216
PspXI	VCTCGAGB	1 cut(s)	857
PstNI	CAGNNNCTG	1 cut(s)	1711
PsuI	RGATCY	1 cut(s)	339
RsaI	GTAC	2 cut(s)	608, 782
RsaNI	GTAC	2 cut(s)	607, 781
RseI	CAYNNNNRTG	4 cut(s)	618, 821, 981, 1287
Rsr2I	CGGWCCG	1 cut(s)	1004
RsrII	CGGWCCG	1 cut(s)	1004
SacI	GAGCTC	1 cut(s)	414
SacII	CCGCGG	1 cut(s)	72
SalI	GTCGAC	1 cut(s)	1643
SaqAI	TTAA	3 cut(s)	638, 1071, 1729
Sau3AI	GATC	5 cut(s)	339, 885, 1302, 1313, 1326
Sau96I	GGNCC	6 cut(s)	550, 717, 1004, 1123, 1216, 1459
SchI	GAGTC	5 cut(s)	446, 1093, 1435, 1469, 1702
ScrFI	CCNGG	7 cut(s)	368, 516, 517, 812, 1127, 1591, 1723
SduI	GDGCHC	6 cut(s)	255, 273, 414, 635, 835, 922
SexAI	ACCWGGT	1 cut(s)	810
SfaNI	GCATC	5 cut(s)	167, 228, 286, 411, 1203
SfoI	GGCGCC	2 cut(s)	128, 334
Sfr274I	CTCGAG	1 cut(s)	857
Sfr303I	CCGCGG	1 cut(s)	72
SgrAI	CRCCGGYG	1 cut(s)	1262
SgrBI	CCGCGG	1 cut(s)	72
SinI	GGWCC	5 cut(s)	550, 717, 1004, 1123, 1216
SlaI	CTCGAG	1 cut(s)	857
SmaI	CCCGGG	1 cut(s)	517
SmiMI	CAYNNNNRTG	4 cut(s)	618, 821, 981, 1287
SmlI	CTYRAG	3 cut(s)	628, 857, 1601
SmoI	CTYRAG	3 cut(s)	628, 857, 1601
Sse9I	AATT	5 cut(s)	28, 403, 565, 1361, 1582
SseBI	AGGCCT	1 cut(s)	1631
SspDI	GGCGCC	2 cut(s)	126, 332
SstI	GAGCTC	1 cut(s)	414
StuI	AGGCCT	1 cut(s)	1631
StyD4I	CCNGG	7 cut(s)	366, 514, 515, 810, 1125, 1589, 1721
StyI	CCWWGG	3 cut(s)	255, 1050, 1164
TaaI	ACNGT	2 cut(s)	1372, 1431
TaiI	ACGT	7 cut(s)	587, 759, 1119, 1272, 1326, 1485, 1650
TaqI	TCGA	8 cut(s)	450, 469, 531, 858, 951, 1316, 1608, 1644
TasI	AATT	5 cut(s)	28, 403, 565, 1361, 1582
TatI	WGTACW	1 cut(s)	606
TauI	GCSGC	5 cut(s)	71, 74, 740, 747, 1534
TfiI	GAWTC	2 cut(s)	1597, 1679
Tru1I	TTAA	3 cut(s)	638, 1071, 1729
Tru9I	TTAA	3 cut(s)	638, 1071, 1729
TscAI	CASTG	2 cut(s)	255, 710
TseFI	GTSAC	2 cut(s)	814, 970
TseI	GCWGC	7 cut(s)	35, 144, 879, 937, 1180, 1403, 1663
Tsp45I	GTSAC	2 cut(s)	814, 970
TspDTI	ATGAA	4 cut(s)	17, 413, 504, 1214
TspGWI	ACGGA	1 cut(s)	517
TspMI	CCCGGG	1 cut(s)	515
TspRI	CASTG	2 cut(s)	255, 710
VpaK11BI	GGWCC	5 cut(s)	550, 717, 1004, 1123, 1216
XapI	RAATTY	1 cut(s)	1582
XceI	RCATGY	2 cut(s)	826, 980
XcmI	CCANNNNNNNNNTGG	1 cut(s)	424
XhoI	CTCGAG	1 cut(s)	857
XmaI	CCCGGG	1 cut(s)	515
XmiI	GTMKAC	1 cut(s)	1644
ZraI	GACGTC	2 cut(s)	585, 1270
Zsp2I	ATGCAT	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.