Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0003881

Physical Location & Seq

Genomic Coordinates Forward (+)

978503 .. 980732

Gene Structure 2230 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G013700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGCCCTTGAATCAATGAACATGCTTCCCAAATGTGAGGCTAACTATACAGCTCTCACCCCTACAACTTTTCTGAAGAGAGCTGCTGCCTTTTATGCTAACCGTACCTCAGTCATCTATGAAGGCACTCGCTTCACATGGGGCCAAACCTACGATCGTTGCTGCCGTCTCGCTTCCTCCCTTCTTTCTCTTAACATCGTCAAGCACGATGTTGTATCAGTGTTGGCTCCTAATGTTCCAGCAATGTATGAAATGCATTTCGCAGTGCCCATGGCCGGGGCTGTGCTTAACACCGTTAACACCCGCCTCGATGCCAAAAACATAGCCTCCATTCTCCGCCACTCGGGGGCCAAAGTCTTCTTCGTTGACTACCAGTTCGTCCCCCTGGCCCGCGAGGCCCTCAGGATCTTCATGTCCGGTGCTTCTCATGAGCCATCCATGCCTTTGGTCATCGTGATCGACGACATCGACTCCCCCACAGGCATTCGGCTCGGTGAGTTGGAATACGAGCAGCTCATCAAAAAGGGCAACCCCCGTTTTGTCTCTGTGGAGGTCGCCGACGAGTGGGACCCGGTGGCCTTGAACTACACCTCCGGAACGACGTCAGAACCCAAAGGCGTTGTGTACAGCCACAGAGGTGCTTACTTGAGCACCCTCAGCCTGGTCCTTGGTTGGGAAATGGGGAGTGAGCCCGTGTATTTATGGACACTTCCCATGTTCCATTGCAACGGCTGGACCTTCACATGGGGTGTTGCCGCACGTGGTGGCACCAATGTCTGCCTCCGCAACACCACCGCCTACGACATCTACCGCAACATTCACCGCCACAAGGTCACCCACATGTGCTGCGCCCCAATCATTTTCAACATCCTCCTTGAGGCCAAACCGCACGAGCGCCGCGATCTCGCAGTGCCCGTCCAGATCCTTACCGGTGGAGCACCTCCGCCCGCCCCACTGCTTGAGAAAATCGAGCCGCTGGGATTCAAAGTGACCCATGCGTATGGCCTGACCGAGGCAACGGGACCTGCCTTGGTCTGCGAGTGGCAGGCCAAGTGGAACAAGCTGCCTCGGGACGACCAGGCAAAGCTCAAGGCAAGACAAGGCATAAGCATATTGACTCTTGCTGACGTGGACGTGAAGAACAAAGAAACAATGGAGAGTGTCCCCCATGACGGGAAGACCATGGGGGAGATTGTTTTGCGCGGGAGTAGTATCATGAAAGGGTACTACAAGGATAGTAAGGAGACCTTGAAGTCATTCCAGAACGGATGGTTCTGGACAGGAGACGTCGGGGTTGTGCACCCGGACGGCTACCTGGAGATAAAGGACAGGTCGAAAGACGTGATCATATCGGGAGGAGAGAACATTAGCAGTGTGGAAGTGGAGAACATGTTACATGGGCACCCAAAGGTGATGGAGGCAGCAGTAGTTGCAATGCCTCACCCTCGATGGGGCGAAAGTCCATGTGCCTTTGTGGCTCTGAGAAGCAACGCTGAGAGCACCACTGAGTCTGAAATAATCGCTTATTGTCGGAAAAACTTGCCTCACTTTATGGTGCCCAAGAAGGTGGAGTTTCTGCCCCAACTTCCCAGGAACCCAACGGGCAAGGTTCTCAAAAACGAGTTGAGGGATCGGGCAAAGGGCTTCGTCGTGTCGGAAAATTCACAAACCGTCGTGGATTCTGACTACCAAAATCAGCAGATTCTGGCTTTGTCGCGTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0016143 GO:0016144 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0018858 GO:0019605 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046459 GO:0047760 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

575

Amino Acids

63.91

Weight (kDa)

7.62

Isoelectric Point (pI)

37.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65880 AT1G65890 AT1G66120
fragaria_vesca	FvH4_1g27440 FvH4_1g27450
malus_domestica	MD09G1280400.v1.1 MD17G1287600.v1.1
prunus_persica	Prupe.3G013700_v2.0.a1
pyrus_communis	pycom09g18850 pycom17g27060
rosa_chinensis	RchiOBHm_Chr3g0488561 RchiOBHm_Chr3g0488571
rosa_laevigata	RLG00000022942 RLG00000022943
rosa_multiflora	Rmu_sc0004402.1_g000006 Rmu_sc0004402.1_g000007 Rmu_sc0005363.1_g000024 Rmu_sc0005363.1_g000025
rosa_roxburghii	Rroxscaffold_6G00394130 Rroxscaffold_6G00394140
rosa_rugosa	Rorug03G0239300 Rorug03G0239400
rosa_samantha	Rh3AG288300 Rh3AG288400 Rh3BG325000 Rh3BG325100 Rh3CG322200 Rh3CG322300 Rh3DG321000 Rh3DG321100 Rh4AG012700 Rh7BG359000
rosa_wichuraiana	Rw3G025510 Rw3G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1252
AatII	GACGTC	2 cut(s)	605, 1290
Acc36I	ACCTGC	1 cut(s)	1033
AccB1I	GGYRCC	3 cut(s)	767, 1401, 1555
AccII	CGCG	4 cut(s)	393, 900, 1203, 1717
AccIII	TCCGGA	1 cut(s)	593
AclWI	GGATC	3 cut(s)	413, 916, 1638
AcoI	YGGCCR	1 cut(s)	273
AcsI	RAATTY	1 cut(s)	1660
AcuI	CTGAAG	1 cut(s)	95
AcvI	CACGTG	1 cut(s)	761
AcyI	GRCGYC	2 cut(s)	602, 1287
AdeI	CACNNNGTG	1 cut(s)	764
AfaI	GTAC	3 cut(s)	106, 626, 1226
AflIII	ACRYGT	2 cut(s)	840, 1389
AgeI	ACCGGT	1 cut(s)	929
AgsI	TTSAA	5 cut(s)	11, 583, 865, 985, 1252
AjiI	CACGTC	3 cut(s)	1129, 1135, 1342
AjnI	CCWGG	5 cut(s)	384, 660, 1077, 1314, 1589
AjuI	GAANNNNNNNTTGG	2 cut(s)	344, 376
AleI	CACNNNNGTG	1 cut(s)	636
AloI	GAACNNNNNNTCC	2 cut(s)	575, 607
AluBI	AGCT	5 cut(s)	53, 83, 514, 1063, 1087
AluI	AGCT	5 cut(s)	53, 83, 514, 1063, 1087
Alw21I	GWGCWC	4 cut(s)	653, 940, 1302, 1502
Alw26I	GTCTC	4 cut(s)	173, 547, 1238, 1278
Alw44I	GTGCAC	1 cut(s)	1298
AlwI	GGATC	3 cut(s)	413, 916, 1638
AlwNI	CAGNNNCTG	1 cut(s)	1705
Ama87I	CYCGRG	2 cut(s)	343, 1068
Aor13HI	TCCGGA	1 cut(s)	593
ApaLI	GTGCAC	1 cut(s)	1298
ApeKI	GCWGC	7 cut(s)	83, 86, 162, 511, 846, 1063, 1421
ApoI	RAATTY	1 cut(s)	1660
ArsI	GACNNNNNNTTYG	2 cut(s)	359, 391
AsiGI	ACCGGT	1 cut(s)	929
Asp700I	GAANNNNTTC	1 cut(s)	1256
AspLEI	GCGC	3 cut(s)	851, 897, 1203
AspS9I	GGNCC	9 cut(s)	4, 142, 348, 388, 397, 568, 664, 735, 1022
AsuC2I	CCSGG	3 cut(s)	277, 572, 1304
AsuHPI	GGTGA	6 cut(s)	49, 506, 812, 826, 1423, 1433
AvaI	CYCGRG	2 cut(s)	343, 1068
AvaII	GGWCC	4 cut(s)	568, 664, 735, 1022
AxyI	CCTNAGG	1 cut(s)	401
BaeGI	GKGCMC	5 cut(s)	270, 915, 1302, 1404, 1560
BanI	GGYRCC	3 cut(s)	767, 1401, 1555
BanII	GRGCYC	1 cut(s)	693
BauI	CACGAG	1 cut(s)	890
BbrPI	CACGTG	1 cut(s)	761
BbsI	GAAGAC	2 cut(s)	349, 1184
Bbv12I	GWGCWC	4 cut(s)	653, 940, 1302, 1502
BbvCI	CCTCAGC	1 cut(s)	656
BbvI	GCAGC	7 cut(s)	70, 73, 149, 523, 833, 1050, 1433
BccI	CCATC	4 cut(s)	442, 1263, 1408, 1443
BceAI	ACGGC	3 cut(s)	150, 745, 1324
BcgI	CGANNNNNNTGC	2 cut(s)	472, 506
BciT130I	CCWGG	5 cut(s)	386, 662, 1079, 1316, 1591
BclI	TGATCA	1 cut(s)	1344
BcnI	CCSGG	3 cut(s)	277, 572, 1304
BcoDI	GTCTC	4 cut(s)	173, 547, 1238, 1278
BfoI	RGCGCY	1 cut(s)	898
BfuAI	ACCTGC	1 cut(s)	1033
BglI	GCCNNNNNGGC	2 cut(s)	395, 1475
Bme1390I	CCNGG	8 cut(s)	277, 386, 572, 662, 1079, 1304, 1316, 1591
Bme18I	GGWCC	4 cut(s)	568, 664, 735, 1022
BmeT110I	CYCGRG	2 cut(s)	343, 1068
BmgBI	CACGTC	3 cut(s)	1129, 1135, 1342
BmgT120I	GGNCC	9 cut(s)	4, 142, 348, 388, 397, 568, 664, 735, 1022
BmrFI	CCNGG	8 cut(s)	277, 386, 572, 662, 1079, 1304, 1316, 1591
BmsI	GCATC	1 cut(s)	301
BpiI	GAAGAC	2 cut(s)	349, 1184
BpmI	CTGGAG	1 cut(s)	1337
Bpu10I	CCTNAGC	1 cut(s)	656
BpuEI	CTTGAG	4 cut(s)	667, 896, 980, 1073
BpuMI	CCSGG	3 cut(s)	277, 572, 1304
BsaAI	YACGTR	1 cut(s)	761
BsaHI	GRCGYC	2 cut(s)	602, 1287
BsaI	GGTCTC	1 cut(s)	1238
BsaJI	CCNNGG	9 cut(s)	270, 276, 384, 667, 1011, 1029, 1067, 1182, 1589
BsaWI	WCCGGW	3 cut(s)	416, 593, 929
BsaXI	ACNNNNNCTCC	8 cut(s)	311, 341, 455, 485, 575, 605, 1376, 1406
Bse118I	RCCGGY	1 cut(s)	929
Bse1I	ACTGG	1 cut(s)	373
Bse21I	CCTNAGG	1 cut(s)	401
Bse3DI	GCAATG	3 cut(s)	249, 721, 1440
BseAI	TCCGGA	1 cut(s)	593
BseBI	CCWGG	5 cut(s)	386, 662, 1079, 1316, 1591
BseDI	CCNNGG	9 cut(s)	270, 276, 384, 667, 1011, 1029, 1067, 1182, 1589
BseGI	GGATG	3 cut(s)	434, 867, 1274
BseMI	GCAATG	3 cut(s)	249, 721, 1440
BseMII	CTCAG	6 cut(s)	123, 415, 670, 1472, 1485, 1497
BseNI	ACTGG	1 cut(s)	373
BseRI	GAGGAG	1 cut(s)	1371
BseSI	GKGCMC	5 cut(s)	270, 915, 1302, 1404, 1560
BseXI	GCAGC	7 cut(s)	70, 73, 149, 523, 833, 1050, 1433
BseYI	CCCAGC	1 cut(s)	976
Bsh1236I	CGCG	4 cut(s)	393, 900, 1203, 1717
Bsh1285I	CGRYCG	1 cut(s)	157
BshNI	GGYRCC	3 cut(s)	767, 1401, 1555
BshTI	ACCGGT	1 cut(s)	929
BsiEI	CGRYCG	1 cut(s)	157
BsiHKAI	GWGCWC	4 cut(s)	653, 940, 1302, 1502
BsiHKCI	CYCGRG	2 cut(s)	343, 1068
BsiSI	CCGG	6 cut(s)	276, 417, 572, 594, 930, 1304
BslFI	GGGAC	5 cut(s)	365, 581, 1035, 1085, 1148
BsmAI	GTCTC	4 cut(s)	173, 547, 1238, 1278
BsmBI	CGTCTC	2 cut(s)	173, 1278
BsmFI	GGGAC	5 cut(s)	365, 581, 1035, 1085, 1148
BsmI	GAATGC	1 cut(s)	483
Bso31I	GGTCTC	1 cut(s)	1238
BsoBI	CYCGRG	2 cut(s)	343, 1068
Bsp1286I	GDGCHC	9 cut(s)	270, 653, 693, 915, 940, 1302, 1404, 1502, 1560
Bsp13I	TCCGGA	1 cut(s)	593
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
Bsp19I	CCATGG	2 cut(s)	270, 1182
BspCNI	CTCAG	6 cut(s)	122, 414, 669, 1473, 1486, 1498
BspEI	TCCGGA	1 cut(s)	593
BspFNI	CGCG	4 cut(s)	393, 900, 1203, 1717
BspHI	TCATGA	2 cut(s)	427, 1215
BspMI	ACCTGC	1 cut(s)	1033
BspPI	GGATC	3 cut(s)	413, 916, 1638
BspT107I	GGYRCC	3 cut(s)	767, 1401, 1555
BspTNI	GGTCTC	1 cut(s)	1238
BsrDI	GCAATG	3 cut(s)	249, 721, 1440
BsrFI	RCCGGY	1 cut(s)	929
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	1 cut(s)	373
BssAI	RCCGGY	1 cut(s)	929
BssECI	CCNNGG	9 cut(s)	270, 276, 384, 667, 1011, 1029, 1067, 1182, 1589
BssMI	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
BssNI	GRCGYC	2 cut(s)	602, 1287
BssSI	CACGAG	1 cut(s)	890
BssT1I	CCWWGG	4 cut(s)	270, 667, 1029, 1182
Bst2BI	CACGAG	1 cut(s)	890
Bst2UI	CCWGG	5 cut(s)	386, 662, 1079, 1316, 1591
Bst4CI	ACNGT	3 cut(s)	104, 295, 1672
Bst6I	CTCTTC	1 cut(s)	71
BstACI	GRCGYC	2 cut(s)	602, 1287
BstAPI	GCANNNNNTGC	1 cut(s)	1430
BstAUI	TGTACA	1 cut(s)	624
BstBAI	YACGTR	1 cut(s)	761
BstC8I	GCNNGC	3 cut(s)	391, 948, 1047
BstDEI	CTNAG	6 cut(s)	109, 401, 656, 1481, 1494, 1506
BstDSI	CCRYGG	2 cut(s)	270, 1182
BstEII	GGTNACC	1 cut(s)	832
BstENI	CCTNNNNNAGG	2 cut(s)	875, 1010
BstF5I	GGATG	3 cut(s)	434, 867, 1274
BstFNI	CGCG	4 cut(s)	393, 900, 1203, 1717
BstH2I	RGCGCY	1 cut(s)	898
BstHHI	GCGC	3 cut(s)	851, 897, 1203
BstKTI	GATC	7 cut(s)	157, 408, 459, 904, 924, 1347, 1633
BstMAI	GTCTC	4 cut(s)	173, 547, 1238, 1278
BstMBI	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
BstMCI	CGRYCG	1 cut(s)	157
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 395, 439, 657, 1430, 1475
BstNI	CCWGG	5 cut(s)	386, 662, 1079, 1316, 1591
BstNSI	RCATGY	3 cut(s)	25, 844, 1393
BstPI	GGTNACC	1 cut(s)	832
BstSCI	CCNGG	8 cut(s)	275, 384, 570, 660, 1077, 1302, 1314, 1589
BstSLI	GKGCMC	5 cut(s)	270, 915, 1302, 1404, 1560
BstUI	CGCG	4 cut(s)	393, 900, 1203, 1717
BstV1I	GCAGC	7 cut(s)	70, 73, 149, 523, 833, 1050, 1433
BstV2I	GAAGAC	2 cut(s)	349, 1184
BstX2I	RGATCY	2 cut(s)	405, 921
BstXI	CCANNNNNNTGG	3 cut(s)	445, 1001, 1567
BstYI	RGATCY	2 cut(s)	405, 921
Bsu36I	CCTNAGG	1 cut(s)	401
BtgI	CCRYGG	2 cut(s)	270, 1182
BtrI	CACGTC	3 cut(s)	1129, 1135, 1342
BtsCI	GGATG	3 cut(s)	434, 867, 1274
BtsI	GCAGTG	4 cut(s)	270, 915, 953, 1378
BtsIMutI	CAGTG	6 cut(s)	225, 270, 915, 953, 1378, 1503
BveI	ACCTGC	1 cut(s)	1033
Cac8I	GCNNGC	3 cut(s)	391, 948, 1047
CaiI	CAGNNNCTG	1 cut(s)	1705
CciI	TCATGA	2 cut(s)	427, 1215
CfoI	GCGC	3 cut(s)	851, 897, 1203
Cfr10I	RCCGGY	1 cut(s)	929
Cfr13I	GGNCC	9 cut(s)	4, 142, 348, 388, 397, 568, 664, 735, 1022
CseI	GACGC	1 cut(s)	1706
Csp6I	GTAC	3 cut(s)	105, 625, 1225
CspAI	ACCGGT	1 cut(s)	929
CviQI	GTAC	3 cut(s)	105, 625, 1225
DdeI	CTNAG	6 cut(s)	109, 401, 656, 1481, 1494, 1506
DpnI	GATC	7 cut(s)	156, 407, 458, 903, 923, 1346, 1632
DpnII	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
DraIII	CACNNNGTG	1 cut(s)	764
DrdI	GACNNNNNNGTC	1 cut(s)	1252
DseDI	GACNNNNNNGTC	1 cut(s)	1252
EaeI	YGGCCR	1 cut(s)	273
Eam1104I	CTCTTC	1 cut(s)	71
EarI	CTCTTC	1 cut(s)	71
EciI	GGCGGA	2 cut(s)	326, 933
Eco130I	CCWWGG	4 cut(s)	270, 667, 1029, 1182
Eco24I	GRGCYC	1 cut(s)	693
Eco31I	GGTCTC	1 cut(s)	1238
Eco47I	GGWCC	4 cut(s)	568, 664, 735, 1022
Eco57I	CTGAAG	1 cut(s)	95
Eco72I	CACGTG	1 cut(s)	761
Eco81I	CCTNAGG	1 cut(s)	401
Eco88I	CYCGRG	2 cut(s)	343, 1068
Eco91I	GGTNACC	1 cut(s)	832
EcoNI	CCTNNNNNAGG	2 cut(s)	875, 1010
EcoO109I	RGGNCCY	3 cut(s)	397, 568, 1022
EcoO65I	GGTNACC	1 cut(s)	832
EcoRII	CCWGG	5 cut(s)	384, 660, 1077, 1314, 1589
EcoT14I	CCWWGG	4 cut(s)	270, 667, 1029, 1182
EcoT22I	ATGCAT	1 cut(s)	258
EcoT38I	GRGCYC	1 cut(s)	693
ErhI	CCWWGG	4 cut(s)	270, 667, 1029, 1182
Esp3I	CGTCTC	2 cut(s)	173, 1278
FalI	AAGNNNNNCTT	2 cut(s)	1232, 1264
FaqI	GGGAC	5 cut(s)	365, 581, 1035, 1085, 1148
FauI	CCCGC	4 cut(s)	311, 398, 955, 1196
FbaI	TGATCA	1 cut(s)	1344
FokI	GGATG	3 cut(s)	421, 854, 1281
FriOI	GRGCYC	1 cut(s)	693
GlaI	GCGC	3 cut(s)	850, 896, 1202
GsaI	CCCAGC	1 cut(s)	980
GsuI	CTGGAG	1 cut(s)	1337
HaeII	RGCGCY	1 cut(s)	898
HapII	CCGG	6 cut(s)	276, 417, 572, 594, 930, 1304
HgaI	GACGC	1 cut(s)	1706
HhaI	GCGC	3 cut(s)	851, 897, 1203
Hin1I	GRCGYC	2 cut(s)	602, 1287
Hin6I	GCGC	3 cut(s)	849, 895, 1201
HinP1I	GCGC	3 cut(s)	849, 895, 1201
HincII	GTYRAC	2 cut(s)	298, 367
HindII	GTYRAC	2 cut(s)	298, 367
HinfI	GANTC	7 cut(s)	11, 470, 981, 1117, 1508, 1679, 1702
HpaI	GTTAAC	1 cut(s)	298
HpaII	CCGG	6 cut(s)	276, 417, 572, 594, 930, 1304
HphI	GGTGA	6 cut(s)	49, 506, 812, 826, 1423, 1433
Hpy166II	GTNNAC	5 cut(s)	298, 367, 625, 1132, 1300
Hpy188I	TCNGA	7 cut(s)	75, 607, 1482, 1513, 1533, 1657, 1684
Hpy8I	GTNNAC	5 cut(s)	298, 367, 625, 1132, 1300
Hpy99I	CGWCG	6 cut(s)	464, 563, 604, 1292, 1652, 1676
HpyAV	CCTTC	4 cut(s)	116, 191, 748, 1558
HpyCH4III	ACNGT	3 cut(s)	104, 295, 1672
HpyCH4IV	ACGT	6 cut(s)	602, 760, 1128, 1134, 1287, 1341
HpyCH4V	TGCA	4 cut(s)	256, 726, 1300, 1433
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 395, 439, 657, 1430, 1475
HpyF3I	CTNAG	6 cut(s)	109, 401, 656, 1481, 1494, 1506
HpySE526I	ACGT	6 cut(s)	602, 760, 1128, 1134, 1287, 1341
Hsp92I	GRCGYC	2 cut(s)	602, 1287
HspAI	GCGC	3 cut(s)	849, 895, 1201
KflI	GGGWCCC	1 cut(s)	568
Kpn2I	TCCGGA	1 cut(s)	593
Ksp22I	TGATCA	1 cut(s)	1344
KspAI	GTTAAC	1 cut(s)	298
Kzo9I	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
LmnI	GCTCC	2 cut(s)	232, 935
Lsp1109I	GCAGC	7 cut(s)	70, 73, 149, 523, 833, 1050, 1433
LweI	GCATC	1 cut(s)	301
MaeII	ACGT	6 cut(s)	602, 760, 1128, 1134, 1287, 1341
MaeIII	GTNAC	3 cut(s)	832, 988, 1392
MalI	GATC	7 cut(s)	156, 407, 458, 903, 923, 1346, 1632
MboI	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
MboII	GAAGA	6 cut(s)	88, 349, 352, 400, 1150, 1189
MflI	RGATCY	2 cut(s)	405, 921
MhlI	GDGCHC	9 cut(s)	270, 653, 693, 915, 940, 1302, 1404, 1502, 1560
MluCI	AATT	1 cut(s)	1660
MlyI	GAGTC	3 cut(s)	464, 1111, 1517
MmeI	TCCRAC	3 cut(s)	480, 1511, 1635
Mph1103I	ATGCAT	1 cut(s)	258
MroI	TCCGGA	1 cut(s)	593
MroXI	GAANNNNTTC	1 cut(s)	1256
MseI	TTAA	3 cut(s)	192, 288, 297
MslI	CAYNNNNRTG	3 cut(s)	636, 839, 999
MspA1I	CMGCKG	1 cut(s)	976
MspI	CCGG	6 cut(s)	276, 417, 572, 594, 930, 1304
MspR9I	CCNGG	8 cut(s)	277, 386, 572, 662, 1079, 1304, 1316, 1591
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	5 cut(s)	386, 662, 1079, 1316, 1591
MvnI	CGCG	4 cut(s)	393, 900, 1203, 1717
MwoI	GCNNNNNNNGC	6 cut(s)	95, 395, 439, 657, 1430, 1475
NciI	CCSGG	3 cut(s)	277, 572, 1304
NcoI	CCATGG	2 cut(s)	270, 1182
NdeII	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
NmuCI	GTSAC	2 cut(s)	832, 988
NsiI	ATGCAT	1 cut(s)	258
NspI	RCATGY	3 cut(s)	25, 844, 1393
OliI	CACNNNNGTG	1 cut(s)	636
PagI	TCATGA	2 cut(s)	427, 1215
PciI	ACATGT	2 cut(s)	840, 1389
PcsI	WCGNNNNNNNCGW	6 cut(s)	163, 204, 459, 465, 897, 912
PctI	GAATGC	1 cut(s)	483
PdmI	GAANNNNTTC	1 cut(s)	1256
PfeI	GAWTC	4 cut(s)	11, 981, 1679, 1702
PinAI	ACCGGT	1 cut(s)	929
Ple19I	CGATCG	1 cut(s)	157
PleI	GAGTC	3 cut(s)	464, 1111, 1516
PmaCI	CACGTG	1 cut(s)	761
PmlI	CACGTG	1 cut(s)	761
PpsI	GAGTC	3 cut(s)	464, 1111, 1516
Ppu21I	YACGTR	1 cut(s)	761
PpuMI	RGGWCCY	2 cut(s)	568, 1022
PscI	ACATGT	2 cut(s)	840, 1389
Psp5II	RGGWCCY	2 cut(s)	568, 1022
Psp6I	CCWGG	5 cut(s)	384, 660, 1077, 1314, 1589
PspCI	CACGTG	1 cut(s)	761
PspEI	GGTNACC	1 cut(s)	832
PspFI	CCCAGC	1 cut(s)	976
PspGI	CCWGG	5 cut(s)	384, 660, 1077, 1314, 1589
PspPI	GGNCC	9 cut(s)	4, 142, 348, 388, 397, 568, 664, 735, 1022
PspPPI	RGGWCCY	2 cut(s)	568, 1022
PstNI	CAGNNNCTG	1 cut(s)	1705
PsuI	RGATCY	2 cut(s)	405, 921
PvuI	CGATCG	1 cut(s)	157
RsaI	GTAC	3 cut(s)	106, 626, 1226
RsaNI	GTAC	3 cut(s)	105, 625, 1225
RseI	CAYNNNNRTG	3 cut(s)	636, 839, 999
SaqAI	TTAA	3 cut(s)	192, 288, 297
Sau3AI	GATC	7 cut(s)	154, 405, 456, 901, 921, 1344, 1630
Sau96I	GGNCC	9 cut(s)	4, 142, 348, 388, 397, 568, 664, 735, 1022
SchI	GAGTC	3 cut(s)	464, 1111, 1517
ScrFI	CCNGG	8 cut(s)	277, 386, 572, 662, 1079, 1304, 1316, 1591
SduI	GDGCHC	9 cut(s)	270, 653, 693, 915, 940, 1302, 1404, 1502, 1560
SfaNI	GCATC	1 cut(s)	301
SfiI	GGCCNNNNNGGCC	1 cut(s)	395
SinI	GGWCC	4 cut(s)	568, 664, 735, 1022
SmiMI	CAYNNNNRTG	3 cut(s)	636, 839, 999
SmlI	CTYRAG	4 cut(s)	646, 875, 959, 1088
SmoI	CTYRAG	4 cut(s)	646, 875, 959, 1088
Sse9I	AATT	1 cut(s)	1660
StyD4I	CCNGG	8 cut(s)	275, 384, 570, 660, 1077, 1302, 1314, 1589
StyI	CCWWGG	4 cut(s)	270, 667, 1029, 1182
TaaI	ACNGT	3 cut(s)	104, 295, 1672
TaiI	ACGT	6 cut(s)	605, 763, 1131, 1137, 1290, 1344
TaqI	TCGA	6 cut(s)	309, 459, 468, 969, 1334, 1447
TaqII	GACCGA	1 cut(s)	1025
TasI	AATT	1 cut(s)	1660
TatI	WGTACW	1 cut(s)	624
TauI	GCSGC	3 cut(s)	758, 900, 976
TfiI	GAWTC	4 cut(s)	11, 981, 1679, 1702
Tru1I	TTAA	3 cut(s)	192, 288, 297
Tru9I	TTAA	3 cut(s)	192, 288, 297
TscAI	CASTG	6 cut(s)	225, 270, 915, 960, 1378, 1510
TseFI	GTSAC	2 cut(s)	832, 988
TseI	GCWGC	7 cut(s)	83, 86, 162, 511, 846, 1063, 1421
Tsp45I	GTSAC	2 cut(s)	832, 988
TspDTI	ATGAA	5 cut(s)	32, 135, 264, 400, 1232
TspGWI	ACGGA	1 cut(s)	1281
TspRI	CASTG	6 cut(s)	225, 270, 915, 960, 1378, 1510
VneI	GTGCAC	1 cut(s)	1298
VpaK11BI	GGWCC	4 cut(s)	568, 664, 735, 1022
XagI	CCTNNNNNAGG	2 cut(s)	875, 1010
XapI	RAATTY	1 cut(s)	1660
XceI	RCATGY	3 cut(s)	25, 844, 1393
XmnI	GAANNNNTTC	1 cut(s)	1256
ZraI	GACGTC	2 cut(s)	603, 1288
Zsp2I	ATGCAT	1 cut(s)	258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.