Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003881

Physical Location & Seq

Genomic Coordinates Reverse (-)

15522408 .. 15524233

Gene Structure 1826 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022942

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGAGTGCACCGATGAATATGCTTCCCAAATGCGATGCCAATTACGCAGCTCTCACCCCTACAACTTTCTTGAAAAGAGCTGCTGCGTTTTATTCCAACCGTACTTCCCTCATCTACGAAGGAACTCGCTTCACATGGCGCCAAACCCATGACCGTTGCTGCCGTCTTGCTTCTTCCCTTCTGTCCCTTAACATTGCCAAACACGACGTGGTTTCGGTGTTGGCTCCCAATATTCCTGCATTGTATGAGATGCATTTCGCCGTGCCGATGGCTGGTGCGGTACTCAACACCATCAACTCTCGACTTGATCCCAAAAACATCGCCTCCATTCTGAAACACTCTGGTGCCAAGGTCTTCTTTGTCGACTACCAGTACGTCCCTCAGGCGCGTGAGGCACTCAGGATTCTCATGATGAGCTCTCAGCCATCCATGATGCCGTTGGTCATCGTGATCGACGACATCGACTCACCCACCGGAGTTCGGTTGGGAGAACTCGAGTACGAGCAGCTCATCCACAAGGGCAATCCCCGGTTCGTCGGCATCGACGTCGCGGATGAGTGGGACCCAATTTCCTTGAATTACACTTCTGGCACAACTTCTGAACCAAAAGGTGTTGTGTACAGCCACAGAGGTGCTTACTTGAGCACTCTGAGCCTAATTCTGGGTTGGGAAATGGGGGGCGAGCCTGTTTATCTATGGACGCTCCCTATGTTCCATTGCAACGGCTGGACCTTCACCTGGGGAGTGGCGGCACGCGGCGGGACCAACGTCTGCCTCCGCAACACCACCGCGTACGACATCTACCGCAACATTAAAAGACACCACGTGACCCATATGTGTTGCGCTCCCATCATTTTCAACATACTCCTCGAGGCCAAGCCCCACGAGCGCTGCCACATCACAAACCCTATTGAGATCCTCACCGGCGGAGCACCACCACCGGCTCCGCTGCTCGAGAAAATCGAGCCGCTAGGGTTCAAAGTCACCCACGCGTACGGCCTGACAGAAGCAACCGGACCGGCTCTGGTTTGCGAGTGGCAGGCCAAGTGGAACAAGCTACCGAAAGATGAGCAATCCAAGCTGAAAGCGAGGCAAGGGATAAGCATACTGACTCTGGCTGACGTGGATGTGAAGGACCTGGATACAATGGCGAGTGTTCCCCACGACGGCAAGACCATGGGAGAGATTGTGTTGCGTGGAAGTAGCATTATGAAAGGCTACTTCAAGGACAGCGCGGCCACCAACAAGGCATTCCGGAAAGGCTGGTTCTTGACCGGAGACGTCGGCGTTATACACCCCGATGGTTACCTAGAAATCAAGGACAGATCGAAAGACGTGATCATCTCCGGTGGGGAGAACATCAGCAGTGTGGAATTGGAGAGCGTGCTCTACAGACACCCAAAAGTTTTGGAGGCGGCGGTGGTGGCAATGCCGCACCCTCACTGGGGTGAGAGTCCCTGTGCTTTCGTGGCGCTCAGAAGTGACACCACCGTCCTGACGGAGGCTGACATCATCGCCTACTGTCGGAAGAATCTGCCGCACTTTATGGCTCCGAAAAAGGTGGAGTTTGTGGCTGAGCTGCCCAAGACTTCGACCGGGAAGATTCAAAAATTCGAGCTGAGGGCCAAGGCCAAGGCATTCAACGTCGTCGAATCATCGGATCAAAAAGTCATTGATCCTAGTTACAACGAGCAGATTCTTGCCCTGTCCCGTCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0016143 GO:0016144 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0018858 GO:0019605 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0032787 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046459 GO:0047760 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

573

Amino Acids

63.48

Weight (kDa)

8.17

Isoelectric Point (pI)

39.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	25 - 408	1e-80	AMP-binding enzyme
AMP-binding_C	PF13193	458 - 534	4.1e-25	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65880 AT1G65890 AT1G66120
fragaria_vesca	FvH4_1g27440 FvH4_1g27450
malus_domestica	MD09G1280400.v1.1 MD17G1287600.v1.1
prunus_persica	Prupe.3G013700_v2.0.a1
pyrus_communis	pycom09g18850 pycom17g27060
rosa_chinensis	RchiOBHm_Chr3g0488561 RchiOBHm_Chr3g0488571
rosa_laevigata	RLG00000022942 RLG00000022943
rosa_multiflora	Rmu_sc0004402.1_g000006 Rmu_sc0004402.1_g000007 Rmu_sc0005363.1_g000024 Rmu_sc0005363.1_g000025
rosa_roxburghii	Rroxscaffold_6G00394130 Rroxscaffold_6G00394140
rosa_rugosa	Rorug03G0239300 Rorug03G0239400
rosa_samantha	Rh3AG288300 Rh3AG288400 Rh3BG325000 Rh3BG325100 Rh3CG322200 Rh3CG322300 Rh3DG321000 Rh3DG321100 Rh4AG012700 Rh7BG359000
rosa_wichuraiana	Rw3G025510 Rw3G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1490
AatII	GACGTC	2 cut(s)	549, 1284
AbsI	CCTCGAGG	1 cut(s)	869
AccB1I	GGYRCC	2 cut(s)	138, 344
AccI	GTMKAC	1 cut(s)	363
AccII	CGCG	6 cut(s)	388, 551, 756, 791, 992, 1235
AccIII	TCCGGA	1 cut(s)	1254
AclWI	GGATC	4 cut(s)	302, 910, 1668, 1670
AcoI	YGGCCR	1 cut(s)	1236
AcsI	RAATTY	1 cut(s)	1610
AcvI	CACGTG	1 cut(s)	826
AcyI	GRCGYC	3 cut(s)	139, 546, 1281
AdeI	CACNNNGTG	2 cut(s)	208, 826
AfaI	GTAC	7 cut(s)	103, 282, 374, 500, 620, 794, 995
AfeI	AGCGCT	1 cut(s)	890
AfiI	CCNNNNNNNGG	9 cut(s)	272, 480, 661, 738, 1166, 1444, 1445, 1501, 1524
AflIII	ACRYGT	1 cut(s)	990
AgsI	TTSAA	7 cut(s)	73, 577, 859, 979, 1225, 1607, 1642
AjiI	CACGTC	3 cut(s)	208, 1123, 1336
AjnI	CCWGG	2 cut(s)	737, 1137
AjuI	GAANNNNNNNTTGG	2 cut(s)	1235, 1267
AleI	CACNNNNGTG	3 cut(s)	342, 630, 1446
AluBI	AGCT	8 cut(s)	50, 80, 417, 508, 1057, 1081, 1579, 1618
AluI	AGCT	8 cut(s)	50, 80, 417, 508, 1057, 1081, 1579, 1618
Alw21I	GWGCWC	5 cut(s)	10, 419, 647, 934, 1389
Alw26I	GTCTC	1 cut(s)	1272
Alw44I	GTGCAC	1 cut(s)	6
AlwI	GGATC	4 cut(s)	302, 910, 1668, 1670
Ama87I	CYCGRG	3 cut(s)	494, 869, 953
Aor13HI	TCCGGA	1 cut(s)	1254
Aor51HI	AGCGCT	1 cut(s)	890
AoxI	GGCC	6 cut(s)	873, 997, 1041, 1236, 1623, 1629
ApaLI	GTGCAC	1 cut(s)	6
ApeKI	GCWGC	8 cut(s)	47, 80, 83, 159, 505, 891, 949, 1579
ApoI	RAATTY	1 cut(s)	1610
AspLEI	GCGC	6 cut(s)	141, 388, 845, 891, 1235, 1474
AspS9I	GGNCC	6 cut(s)	562, 729, 762, 1016, 1135, 1623
AsuC2I	CCSGG	2 cut(s)	529, 1597
AsuHPI	GGTGA	6 cut(s)	46, 459, 727, 913, 976, 1460
AvaI	CYCGRG	3 cut(s)	494, 869, 953
AvaII	GGWCC	5 cut(s)	562, 729, 762, 1016, 1135
AxyI	CCTNAGG	1 cut(s)	381
BaeGI	GKGCMC	1 cut(s)	10
BanI	GGYRCC	2 cut(s)	138, 344
BanII	GRGCYC	1 cut(s)	419
BauI	CACGAG	1 cut(s)	884
BbrPI	CACGTG	1 cut(s)	826
BbsI	GAAGAC	1 cut(s)	346
Bbv12I	GWGCWC	5 cut(s)	10, 419, 647, 934, 1389
BbvCI	CCTCAGC	1 cut(s)	1619
BbvI	GCAGC	8 cut(s)	59, 67, 70, 146, 517, 878, 936, 1566
BccI	CCATC	5 cut(s)	262, 299, 433, 857, 1295
BceAI	ACGGC	6 cut(s)	147, 245, 421, 739, 1012, 1183
BcgI	CGANNNNNNTGC	3 cut(s)	35, 529, 563
BciT130I	CCWGG	2 cut(s)	739, 1139
BciVI	GTATCC	1 cut(s)	1135
BclI	TGATCA	1 cut(s)	1338
BcnI	CCSGG	2 cut(s)	529, 1597
BcoDI	GTCTC	1 cut(s)	1272
BfaI	CTAG	3 cut(s)	971, 1310, 1680
BfmI	CTRYAG	1 cut(s)	1390
BfoI	RGCGCY	3 cut(s)	142, 892, 1475
BfuI	GTATCC	1 cut(s)	1135
BlpI	GCTNAGC	1 cut(s)	1575
Bme1390I	CCNGG	4 cut(s)	529, 739, 1139, 1597
Bme18I	GGWCC	5 cut(s)	562, 729, 762, 1016, 1135
BmeT110I	CYCGRG	3 cut(s)	494, 869, 953
BmgBI	CACGTC	3 cut(s)	208, 1123, 1336
BmgT120I	GGNCC	6 cut(s)	562, 729, 762, 1016, 1135, 1623
BmiI	GGNNCC	8 cut(s)	140, 225, 346, 563, 564, 763, 945, 1551
BmrFI	CCNGG	4 cut(s)	529, 739, 1139, 1597
BmrI	ACTGGG	1 cut(s)	1453
BmsI	GCATC	4 cut(s)	25, 240, 423, 549
BmuI	ACTGGG	1 cut(s)	1453
BoxI	GACNNNNGTC	1 cut(s)	767
BpiI	GAAGAC	1 cut(s)	346
Bpu10I	CCTNAGC	1 cut(s)	1619
Bpu1102I	GCTNAGC	1 cut(s)	1575
BpuEI	CTTGAG	1 cut(s)	661
BpuMI	CCSGG	2 cut(s)	529, 1597
BsaAI	YACGTR	1 cut(s)	826
BsaHI	GRCGYC	3 cut(s)	139, 546, 1281
BsaJI	CCNNGG	6 cut(s)	348, 527, 738, 1176, 1626, 1632
BsaWI	WCCGGW	5 cut(s)	473, 1013, 1254, 1274, 1346
BsaXI	ACNNNNNCTCC	4 cut(s)	308, 338, 1173, 1203
Bsc4I	CCNNNNNNNGG	9 cut(s)	272, 480, 661, 738, 1166, 1444, 1445, 1501, 1524
Bse118I	RCCGGY	3 cut(s)	923, 940, 1018
Bse1I	ACTGG	2 cut(s)	370, 1448
Bse21I	CCTNAGG	1 cut(s)	381
Bse3DI	GCAATG	3 cut(s)	192, 715, 1434
BseAI	TCCGGA	1 cut(s)	1254
BseBI	CCWGG	2 cut(s)	739, 1139
BseDI	CCNNGG	6 cut(s)	348, 527, 738, 1176, 1626, 1632
BseGI	GGATG	4 cut(s)	425, 510, 559, 1132
BseLI	CCNNNNNNNGG	9 cut(s)	272, 480, 661, 738, 1166, 1444, 1445, 1501, 1524
BseMI	GCAATG	3 cut(s)	192, 715, 1434
BseMII	CTCAG	7 cut(s)	395, 412, 434, 641, 1489, 1566, 1610
BseNI	ACTGG	2 cut(s)	370, 1448
BseRI	GAGGAG	1 cut(s)	857
BseSI	GKGCMC	1 cut(s)	10
BseXI	GCAGC	8 cut(s)	59, 67, 70, 146, 517, 878, 936, 1566
Bsh1236I	CGCG	6 cut(s)	388, 551, 756, 791, 992, 1235
Bsh1285I	CGRYCG	1 cut(s)	1596
BshFI	GGCC	6 cut(s)	875, 999, 1043, 1238, 1625, 1631
BshNI	GGYRCC	2 cut(s)	138, 344
BsiEI	CGRYCG	1 cut(s)	1596
BsiHKAI	GWGCWC	5 cut(s)	10, 419, 647, 934, 1389
BsiHKCI	CYCGRG	3 cut(s)	494, 869, 953
BsiWI	CGTACG	2 cut(s)	792, 993
BslFI	GGGAC	6 cut(s)	169, 362, 575, 775, 1440, 1693
BslI	CCNNNNNNNGG	9 cut(s)	272, 480, 661, 738, 1166, 1444, 1445, 1501, 1524
BsmAI	GTCTC	1 cut(s)	1272
BsmBI	CGTCTC	1 cut(s)	1272
BsmFI	GGGAC	6 cut(s)	169, 362, 575, 775, 1440, 1693
BsmI	GAATGC	2 cut(s)	1250, 1637
BsnI	GGCC	6 cut(s)	875, 999, 1043, 1238, 1625, 1631
BsoBI	CYCGRG	3 cut(s)	494, 869, 953
Bsp1286I	GDGCHC	5 cut(s)	10, 419, 647, 934, 1389
Bsp13I	TCCGGA	1 cut(s)	1254
Bsp1407I	TGTACA	1 cut(s)	618
Bsp143I	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
Bsp1720I	GCTNAGC	1 cut(s)	1575
Bsp19I	CCATGG	1 cut(s)	1176
BspANI	GGCC	6 cut(s)	875, 999, 1043, 1238, 1625, 1631
BspCNI	CTCAG	7 cut(s)	394, 411, 433, 642, 1488, 1567, 1611
BspEI	TCCGGA	1 cut(s)	1254
BspFNI	CGCG	6 cut(s)	388, 551, 756, 791, 992, 1235
BspHI	TCATGA	1 cut(s)	408
BspLI	GGNNCC	8 cut(s)	140, 225, 346, 563, 564, 763, 945, 1551
BspPI	GGATC	4 cut(s)	302, 910, 1668, 1670
BspT107I	GGYRCC	2 cut(s)	138, 344
BsrDI	GCAATG	3 cut(s)	192, 715, 1434
BsrFI	RCCGGY	3 cut(s)	923, 940, 1018
BsrGI	TGTACA	1 cut(s)	618
BsrI	ACTGG	2 cut(s)	370, 1448
BssAI	RCCGGY	3 cut(s)	923, 940, 1018
BssECI	CCNNGG	6 cut(s)	348, 527, 738, 1176, 1626, 1632
BssMI	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
BssNI	GRCGYC	3 cut(s)	139, 546, 1281
BssSI	CACGAG	1 cut(s)	884
BssT1I	CCWWGG	4 cut(s)	348, 1176, 1626, 1632
Bst2BI	CACGAG	1 cut(s)	884
Bst2UI	CCWGG	2 cut(s)	739, 1139
Bst4CI	ACNGT	4 cut(s)	101, 155, 1492, 1523
BstACI	GRCGYC	3 cut(s)	139, 546, 1281
BstAUI	TGTACA	1 cut(s)	618
BstBAI	YACGTR	1 cut(s)	826
BstC8I	GCNNGC	4 cut(s)	683, 754, 1041, 1385
BstDEI	CTNAG	7 cut(s)	381, 398, 420, 650, 1475, 1575, 1619
BstDSI	CCRYGG	1 cut(s)	1176
BstEII	GGTNACC	1 cut(s)	1304
BstENI	CCTNNNNNAGG	1 cut(s)	1499
BstF5I	GGATG	4 cut(s)	425, 510, 559, 1132
BstFNI	CGCG	6 cut(s)	388, 551, 756, 791, 992, 1235
BstH2I	RGCGCY	3 cut(s)	142, 892, 1475
BstHHI	GCGC	6 cut(s)	141, 388, 845, 891, 1235, 1474
BstKTI	GATC	7 cut(s)	310, 453, 918, 1328, 1341, 1663, 1678
BstMAI	GTCTC	1 cut(s)	1272
BstMBI	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
BstMCI	CGRYCG	1 cut(s)	1596
BstMWI	GCNNNNNNNGC	7 cut(s)	44, 392, 651, 886, 1078, 1424, 1469
BstNI	CCWGG	2 cut(s)	739, 1139
BstPAI	GACNNNNGTC	1 cut(s)	767
BstPI	GGTNACC	1 cut(s)	1304
BstSCI	CCNGG	4 cut(s)	527, 737, 1137, 1595
BstSFI	CTRYAG	1 cut(s)	1390
BstSLI	GKGCMC	1 cut(s)	10
BstUI	CGCG	6 cut(s)	388, 551, 756, 791, 992, 1235
BstV1I	GCAGC	8 cut(s)	59, 67, 70, 146, 517, 878, 936, 1566
BstV2I	GAAGAC	1 cut(s)	346
BstX2I	RGATCY	1 cut(s)	915
BstYI	RGATCY	1 cut(s)	915
Bsu36I	CCTNAGG	1 cut(s)	381
BsuI	GTATCC	1 cut(s)	1135
BsuRI	GGCC	6 cut(s)	875, 999, 1043, 1238, 1625, 1631
BtgI	CCRYGG	1 cut(s)	1176
BtgZI	GCGATG	3 cut(s)	48, 304, 1498
BtrI	CACGTC	3 cut(s)	208, 1123, 1336
BtsCI	GGATG	4 cut(s)	425, 510, 559, 1132
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	2 cut(s)	1372, 1441
Cac8I	GCNNGC	4 cut(s)	683, 754, 1041, 1385
CciI	TCATGA	1 cut(s)	408
CfoI	GCGC	6 cut(s)	141, 388, 845, 891, 1235, 1474
Cfr10I	RCCGGY	3 cut(s)	923, 940, 1018
Cfr13I	GGNCC	6 cut(s)	562, 729, 762, 1016, 1135, 1623
CpoI	CGGWCCG	1 cut(s)	1016
CseI	GACGC	1 cut(s)	709
Csp6I	GTAC	7 cut(s)	102, 281, 373, 499, 619, 793, 994
CspI	CGGWCCG	1 cut(s)	1016
CviAII	CATG	5 cut(s)	135, 149, 409, 430, 1177
CviQI	GTAC	7 cut(s)	102, 281, 373, 499, 619, 793, 994
DdeI	CTNAG	7 cut(s)	381, 398, 420, 650, 1475, 1575, 1619
DinI	GGCGCC	1 cut(s)	140
DpnI	GATC	7 cut(s)	309, 452, 917, 1327, 1340, 1662, 1677
DpnII	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
DraIII	CACNNNGTG	2 cut(s)	208, 826
DrdI	GACNNNNNNGTC	1 cut(s)	1490
DseDI	GACNNNNNNGTC	1 cut(s)	1490
EaeI	YGGCCR	1 cut(s)	1236
EciI	GGCGGA	1 cut(s)	942
Ecl136II	GAGCTC	1 cut(s)	417
Eco130I	CCWWGG	4 cut(s)	348, 1176, 1626, 1632
Eco24I	GRGCYC	1 cut(s)	419
Eco47I	GGWCC	5 cut(s)	562, 729, 762, 1016, 1135
Eco47III	AGCGCT	1 cut(s)	890
Eco53kI	GAGCTC	1 cut(s)	417
Eco72I	CACGTG	1 cut(s)	826
Eco81I	CCTNAGG	1 cut(s)	381
Eco88I	CYCGRG	3 cut(s)	494, 869, 953
Eco91I	GGTNACC	1 cut(s)	1304
EcoICRI	GAGCTC	1 cut(s)	417
EcoNI	CCTNNNNNAGG	1 cut(s)	1499
EcoO109I	RGGNCCY	2 cut(s)	562, 1135
EcoO65I	GGTNACC	1 cut(s)	1304
EcoRII	CCWGG	2 cut(s)	737, 1137
EcoT14I	CCWWGG	4 cut(s)	348, 1176, 1626, 1632
EcoT22I	ATGCAT	1 cut(s)	255
EcoT38I	GRGCYC	1 cut(s)	419
EgeI	GGCGCC	1 cut(s)	140
EheI	GGCGCC	1 cut(s)	140
ErhI	CCWWGG	4 cut(s)	348, 1176, 1626, 1632
Esp3I	CGTCTC	1 cut(s)	1272
FaeI	CATG	5 cut(s)	138, 152, 412, 433, 1180
FalI	AAGNNNNNCTT	2 cut(s)	341, 373
FaqI	GGGAC	6 cut(s)	169, 362, 575, 775, 1440, 1693
FatI	CATG	5 cut(s)	134, 148, 408, 429, 1176
FauI	CCCGC	1 cut(s)	752
FauNDI	CATATG	1 cut(s)	834
FbaI	TGATCA	1 cut(s)	1338
FblI	GTMKAC	1 cut(s)	363
FokI	GGATG	4 cut(s)	412, 497, 566, 1139
FriOI	GRGCYC	1 cut(s)	419
FspBI	CTAG	3 cut(s)	971, 1310, 1680
GlaI	GCGC	6 cut(s)	140, 387, 844, 890, 1234, 1473
HaeII	RGCGCY	3 cut(s)	142, 892, 1475
HaeIII	GGCC	6 cut(s)	875, 999, 1043, 1238, 1625, 1631
HgaI	GACGC	1 cut(s)	709
HhaI	GCGC	6 cut(s)	141, 388, 845, 891, 1235, 1474
Hin1I	GRCGYC	3 cut(s)	139, 546, 1281
Hin1II	CATG	5 cut(s)	138, 152, 412, 433, 1180
Hin6I	GCGC	6 cut(s)	139, 386, 843, 889, 1233, 1472
HinP1I	GCGC	6 cut(s)	139, 386, 843, 889, 1233, 1472
HincII	GTYRAC	1 cut(s)	364
HindII	GTYRAC	1 cut(s)	364
HinfI	GANTC	8 cut(s)	403, 464, 1111, 1453, 1531, 1603, 1652, 1696
HphI	GGTGA	6 cut(s)	46, 459, 727, 913, 976, 1460
Hpy166II	GTNNAC	3 cut(s)	8, 364, 619
Hpy188I	TCNGA	7 cut(s)	333, 601, 651, 1478, 1527, 1554, 1660
Hpy188III	TCNNGA	9 cut(s)	70, 300, 400, 409, 448, 955, 1255, 1270, 1495
Hpy8I	GTNNAC	3 cut(s)	8, 364, 619
Hpy99I	CGWCG	9 cut(s)	209, 458, 539, 548, 551, 1169, 1286, 1649, 1652
HpyAV	CCTTC	4 cut(s)	113, 188, 742, 1126
HpyCH4III	ACNGT	4 cut(s)	101, 155, 1492, 1523
HpyCH4IV	ACGT	9 cut(s)	207, 375, 546, 768, 825, 1122, 1281, 1335, 1644
HpyCH4V	TGCA	4 cut(s)	8, 239, 253, 720
HpyF10VI	GCNNNNNNNGC	7 cut(s)	44, 392, 651, 886, 1078, 1424, 1469
HpyF3I	CTNAG	7 cut(s)	381, 398, 420, 650, 1475, 1575, 1619
HpySE526I	ACGT	9 cut(s)	207, 375, 546, 768, 825, 1122, 1281, 1335, 1644
Hsp92I	GRCGYC	3 cut(s)	139, 546, 1281
Hsp92II	CATG	5 cut(s)	138, 152, 412, 433, 1180
HspAI	GCGC	6 cut(s)	139, 386, 843, 889, 1233, 1472
KasI	GGCGCC	1 cut(s)	138
KflI	GGGWCCC	1 cut(s)	562
Kpn2I	TCCGGA	1 cut(s)	1254
Ksp22I	TGATCA	1 cut(s)	1338
Kzo9I	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
LmnI	GCTCC	6 cut(s)	229, 708, 850, 929, 949, 1555
Lsp1109I	GCAGC	8 cut(s)	59, 67, 70, 146, 517, 878, 936, 1566
LweI	GCATC	4 cut(s)	25, 240, 423, 549
MaeI	CTAG	3 cut(s)	971, 1310, 1680
MaeII	ACGT	9 cut(s)	207, 375, 546, 768, 825, 1122, 1281, 1335, 1644
MaeIII	GTNAC	5 cut(s)	826, 982, 1304, 1481, 1682
MalI	GATC	7 cut(s)	309, 452, 917, 1327, 1340, 1662, 1677
MboI	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
MboII	GAAGA	4 cut(s)	165, 346, 1540, 1612
MflI	RGATCY	1 cut(s)	915
MhlI	GDGCHC	5 cut(s)	10, 419, 647, 934, 1389
MluCI	AATT	6 cut(s)	40, 567, 577, 657, 1373, 1610
MluI	ACGCGT	1 cut(s)	990
Mly113I	GGCGCC	1 cut(s)	139
MlyI	GAGTC	3 cut(s)	458, 1105, 1462
MmeI	TCCRAC	2 cut(s)	120, 1505
Mph1103I	ATGCAT	1 cut(s)	255
MroI	TCCGGA	1 cut(s)	1254
MseI	TTAA	2 cut(s)	189, 813
MslI	CAYNNNNRTG	4 cut(s)	342, 630, 1299, 1446
MspA1I	CMGCKG	1 cut(s)	949
MspR9I	CCNGG	4 cut(s)	529, 739, 1139, 1597
Mva1269I	GAATGC	2 cut(s)	1250, 1637
MvaI	CCWGG	2 cut(s)	739, 1139
MvnI	CGCG	6 cut(s)	388, 551, 756, 791, 992, 1235
MwoI	GCNNNNNNNGC	7 cut(s)	44, 392, 651, 886, 1078, 1424, 1469
NarI	GGCGCC	1 cut(s)	139
NciI	CCSGG	2 cut(s)	529, 1597
NcoI	CCATGG	1 cut(s)	1176
NdeI	CATATG	1 cut(s)	834
NdeII	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
NlaIII	CATG	5 cut(s)	138, 152, 412, 433, 1180
NlaIV	GGNNCC	8 cut(s)	140, 225, 346, 563, 564, 763, 945, 1551
NmuCI	GTSAC	3 cut(s)	826, 982, 1481
NsiI	ATGCAT	1 cut(s)	255
OliI	CACNNNNGTG	3 cut(s)	342, 630, 1446
PaeR7I	CTCGAG	3 cut(s)	494, 869, 953
PagI	TCATGA	1 cut(s)	408
PcsI	WCGNNNNNNNCGW	5 cut(s)	453, 459, 540, 543, 960
PctI	GAATGC	2 cut(s)	1250, 1637
PfeI	GAWTC	5 cut(s)	403, 1531, 1603, 1652, 1696
Pfl23II	CGTACG	2 cut(s)	792, 993
PleI	GAGTC	3 cut(s)	458, 1105, 1461
PluTI	GGCGCC	1 cut(s)	142
PmaCI	CACGTG	1 cut(s)	826
PmlI	CACGTG	1 cut(s)	826
PpsI	GAGTC	3 cut(s)	458, 1105, 1461
Ppu21I	YACGTR	1 cut(s)	826
PpuMI	RGGWCCY	2 cut(s)	562, 1135
PshAI	GACNNNNGTC	1 cut(s)	767
Psp124BI	GAGCTC	1 cut(s)	419
Psp5II	RGGWCCY	2 cut(s)	562, 1135
Psp6I	CCWGG	2 cut(s)	737, 1137
PspCI	CACGTG	1 cut(s)	826
PspEI	GGTNACC	1 cut(s)	1304
PspGI	CCWGG	2 cut(s)	737, 1137
PspLI	CGTACG	2 cut(s)	792, 993
PspN4I	GGNNCC	8 cut(s)	140, 225, 346, 563, 564, 763, 945, 1551
PspPI	GGNCC	6 cut(s)	562, 729, 762, 1016, 1135, 1623
PspPPI	RGGWCCY	2 cut(s)	562, 1135
PspXI	VCTCGAGB	2 cut(s)	494, 869
PsuI	RGATCY	1 cut(s)	915
RsaI	GTAC	7 cut(s)	103, 282, 374, 500, 620, 794, 995
RsaNI	GTAC	7 cut(s)	102, 281, 373, 499, 619, 793, 994
RseI	CAYNNNNRTG	4 cut(s)	342, 630, 1299, 1446
Rsr2I	CGGWCCG	1 cut(s)	1016
RsrII	CGGWCCG	1 cut(s)	1016
SacI	GAGCTC	1 cut(s)	419
SalI	GTCGAC	1 cut(s)	362
SaqAI	TTAA	2 cut(s)	189, 813
Sau3AI	GATC	7 cut(s)	307, 450, 915, 1325, 1338, 1660, 1675
Sau96I	GGNCC	6 cut(s)	562, 729, 762, 1016, 1135, 1623
SchI	GAGTC	3 cut(s)	458, 1105, 1462
ScrFI	CCNGG	4 cut(s)	529, 739, 1139, 1597
SduI	GDGCHC	5 cut(s)	10, 419, 647, 934, 1389
SfaNI	GCATC	4 cut(s)	25, 240, 423, 549
SfcI	CTRYAG	1 cut(s)	1390
SfoI	GGCGCC	1 cut(s)	140
Sfr274I	CTCGAG	3 cut(s)	494, 869, 953
SgrAI	CRCCGGYG	1 cut(s)	923
SinI	GGWCC	5 cut(s)	562, 729, 762, 1016, 1135
SlaI	CTCGAG	3 cut(s)	494, 869, 953
SmiMI	CAYNNNNRTG	4 cut(s)	342, 630, 1299, 1446
SmlI	CTYRAG	4 cut(s)	494, 640, 869, 953
SmoI	CTYRAG	4 cut(s)	494, 640, 869, 953
Sse9I	AATT	6 cut(s)	40, 567, 577, 657, 1373, 1610
SspDI	GGCGCC	1 cut(s)	138
SspI	AATATT	1 cut(s)	232
SspMI	CTAG	3 cut(s)	971, 1310, 1680
SstI	GAGCTC	1 cut(s)	419
StyD4I	CCNGG	4 cut(s)	527, 737, 1137, 1595
StyI	CCWWGG	4 cut(s)	348, 1176, 1626, 1632
TaaI	ACNGT	4 cut(s)	101, 155, 1492, 1523
TaiI	ACGT	9 cut(s)	210, 378, 549, 771, 828, 1125, 1284, 1338, 1647
TasI	AATT	6 cut(s)	40, 567, 577, 657, 1373, 1610
TatI	WGTACW	1 cut(s)	618
TauI	GCSGC	7 cut(s)	752, 759, 970, 1238, 1418, 1435, 1540
TfiI	GAWTC	5 cut(s)	403, 1531, 1603, 1652, 1696
Tru1I	TTAA	2 cut(s)	189, 813
Tru9I	TTAA	2 cut(s)	189, 813
TscAI	CASTG	2 cut(s)	1372, 1448
TseFI	GTSAC	3 cut(s)	826, 982, 1481
TseI	GCWGC	8 cut(s)	47, 80, 83, 159, 505, 891, 949, 1579
Tsp45I	GTSAC	3 cut(s)	826, 982, 1481
TspDTI	ATGAA	2 cut(s)	29, 1226
TspGWI	ACGGA	1 cut(s)	1514
TspRI	CASTG	2 cut(s)	1372, 1448
VneI	GTGCAC	1 cut(s)	6
VpaK11BI	GGWCC	5 cut(s)	562, 729, 762, 1016, 1135
XagI	CCTNNNNNAGG	1 cut(s)	1499
XapI	RAATTY	1 cut(s)	1610
XcmI	CCANNNNNNNNNTGG	2 cut(s)	205, 436
XhoI	CTCGAG	3 cut(s)	494, 869, 953
XmiI	GTMKAC	1 cut(s)	363
XspI	CTAG	3 cut(s)	971, 1310, 1680
ZraI	GACGTC	2 cut(s)	547, 1282
Zsp2I	ATGCAT	1 cut(s)	255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.