AT1G69060

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
25964319 .. 25967450
3132 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G69060.1

Sequence Viewer

Length: 1893 bp
ATGCGTTCTATATATGTGCATCGTAAGGAAGTAATGGGAGAGAATCGTCAGATTAGATCACGTTCTTGGAATAGAATGCCAACTAAAAGATGCAGTGCAAATGGCATAATGGAAGAGTTTATTCTGGTAGATGATGATGATGTTATCATTCTTGATTTTCCTGAGTCATCTAAACGGAAAGCTCCGGGTACATCCAGAACCAGGAAGGAGTCCATTATGCCGAGAGTGATTAGCATTGACGATGATGATGATGAGACAGAAAATGTTCAGAAAGCTGGGAGTAGTTCAAGCGGTAACTTGCAAACATCTGCAGAAGTGGATAATGACGATTGCCAATTCATTCAGGAGAAGTGTGCTACTTTTAGATTTTCAAAATGCAAACAGACTTTCTCTACAATGCCCTCTCATGGTATTCGATTTGGTTTAGGCTCTGATACTTATAGTGACTTTTCCGAGAGTGACTGTTCTGATTGTGAGATTTTAGAAGGGTCTCATAGAGATGTCCGCGAGCAGTGGGAACAAGCAGCTCTCTTGAGAAAAATGAAGAAAGCAGGTAAAGCTGGTTTGAGTGAGGAGGCTGGTCCTTCGAATCTCCACTGTGACACTAATTTCGAGCCTGGTTTTGAAAGGAGAACTGAACAACATGATCAAACGTCTTTCTTCTTTGCTGCAAGAAATCCAGATGGTGGAAAAGCTGGTCTGACTGAGGAAGCTGGTCCTTCAAATCTCCACTGTGACAATAATTTCAGACCTGGTTTTGAAAGTAGAACTGAACAACATGATCAAACATCTTTCTTCTTTACTGCAAGTAATCCAGATGGTGAAAAAGAAACCTCTTCTACTTTCTTTGGAGCCGATGGTAGAATCCCTGATATGACGACTTATTTTGGCTCGGTAATGGAGGAAGACAACCAAGCTAAACACACTGCTAATTCTACTTTTTCCAGTAAAGAGGATTTTCGGGGGCCTTCCCCACTGTCACCCGGAATACGAGTTGAACATGAAAGGTTTGATACACCACCAACTCATTTTACTTCGCCAAAAGAACCGATACATCAAACTAGTTTTAAGAAAGTTGTAGAACAGCCAAACAAAGTGCAAGTTCAATGTGAAACTTCACTGTCACCCGAAGAGAATCAAAATAAAAACGTCGCGTATCAGTCTTATACCAAGGAAGTTGAAGAAGAAGAAGACGCATCAAAATTGTCTCCGCCACAGACTTCTAATGGATATGGAGATACAACGCATGTGTTTGGCACCCAAAGTAATGGAGCCAGGTGTGAGCACGGCATAAGTTTAGATGAATCAAGAGAACCGATCATTGATCCTATTCCATCTACCAGTGGACAAGTGCAAGGTACTAATGGTACAGCTCCTGCAATTGATGTCATGCTTAACAGAGAGATATTGAAGGAGACTGATGAATACAAGAGAGCACAAGAAGAAGAATGGGAGTCCAGGCAACGACAGTTACAGATCCAGGCAGACGAAGCTCAGAAGCAACGTAAGAGAAGAAAGTTAGAGAACATGCGAAAGTTGGAGATGGAAAGAAGGCAAAAAGAGAGGGTAGAGGAAGTGAGAGAGACACAGAAGAAGGATGAAGAAAACATGAACATGAAGGAGAAAGTTCGTGCAGAAATAACCAAATCGCTTAAACTGCTGGAACTCAAGAGTTTTAACATGGCAGCGTTGCTTCGAGGCTTAGGGATTCAAGTTGGTGGTGGAATATCTCCTCTGCCAAATGAGGTACACGCGGCATACAAACGAGCAGTATTGAAATTTCATCCGGACAGAGCATCAAGAGGTGGTGACATCAAACAGCAAGTTGAAGCAGAAGAAAAATTCAAGCTTATTGCTCGCATGAAGGACAAATTTAAGCTTATTGCTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

630

Amino Acids

71.39

Weight (kDa)

5.56

Isoelectric Point (pI)

45.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 542
AccB1I GGYRCC 1 cut(s) 1256
AccB7I CCANNNNNTGG 1 cut(s) 686
AccII CGCG 3 cut(s) 507, 1154, 1754
AccIII TCCGGA 1 cut(s) 1786
AciI CCGC 4 cut(s) 291, 505, 1211, 1754
AclWI GGATC 2 cut(s) 1319, 1471
AcsI RAATTY 3 cut(s) 1778, 1841, 1871
AfaI GTAC 4 cut(s) 190, 1360, 1369, 1749
AfiI CCNNNNNNNGG 3 cut(s) 201, 407, 686
AhlI ACTAGT 1 cut(s) 1061
AjnI CCWGG 6 cut(s) 200, 616, 751, 1274, 1457, 1479
Alw21I GWGCWC 2 cut(s) 1287, 1438
Alw26I GTCTC 5 cut(s) 248, 495, 1212, 1409, 1577
AlwI GGATC 2 cut(s) 1319, 1471
AlwNI CAGNNNCTG 1 cut(s) 1376
Aor13HI TCCGGA 1 cut(s) 1786
AoxI GGCC 1 cut(s) 965
ApeKI GCWGC 3 cut(s) 524, 668, 1685
ApoI RAATTY 3 cut(s) 1778, 1841, 1871
ArsI GACNNNNNNTTYG 2 cut(s) 593, 625
Asp700I GAANNNNTTC 1 cut(s) 264
AspS9I GGNCC 3 cut(s) 581, 716, 965
AsuC2I CCSGG 2 cut(s) 186, 984
AsuHPI GGTGA 4 cut(s) 833, 972, 1116, 1820
AsuII TTCGAA 1 cut(s) 587
AvaII GGWCC 2 cut(s) 581, 716
BanI GGYRCC 1 cut(s) 1256
BbsI GAAGAC 2 cut(s) 912, 1197
Bbv12I GWGCWC 2 cut(s) 1287, 1438
BbvI GCAGC 3 cut(s) 536, 655, 1697
BccI CCATC 5 cut(s) 677, 812, 851, 1342, 1537
BceAI ACGGC 1 cut(s) 1303
BciT130I CCWGG 6 cut(s) 202, 618, 753, 1276, 1459, 1481
BclI TGATCA 2 cut(s) 646, 781
BcnI CCSGG 2 cut(s) 186, 984
BcoDI GTCTC 5 cut(s) 248, 495, 1212, 1409, 1577
BcuI ACTAGT 1 cut(s) 1061
BfaI CTAG 1 cut(s) 1062
BfmI CTRYAG 1 cut(s) 309
BfuAI ACCTGC 1 cut(s) 542
BisI GCNGC 4 cut(s) 525, 669, 1686, 1755
BlsI GCNGC 4 cut(s) 526, 670, 1687, 1756
Bme1390I CCNGG 8 cut(s) 186, 202, 618, 753, 984, 1276, 1459, 1481
Bme18I GGWCC 2 cut(s) 581, 716
BmgT120I GGNCC 3 cut(s) 581, 716, 965
BmiI GGNNCC 4 cut(s) 853, 966, 1258, 1273
BmrFI CCNGG 8 cut(s) 186, 202, 618, 753, 984, 1276, 1459, 1481
BmsI GCATC 4 cut(s) 28, 80, 1205, 1805
BpiI GAAGAC 2 cut(s) 912, 1197
Bpu10I CCTNAGC 1 cut(s) 1702
Bpu14I TTCGAA 1 cut(s) 587
BpuEI CTTGAG 2 cut(s) 553, 1652
BpuMI CCSGG 2 cut(s) 186, 984
BsaI GGTCTC 1 cut(s) 495
BsaJI CCNNGG 1 cut(s) 1170
BsaWI WCCGGW 1 cut(s) 1786
Bsc4I CCNNNNNNNGG 3 cut(s) 201, 407, 686
Bse1I ACTGG 2 cut(s) 945, 1341
BseAI TCCGGA 1 cut(s) 1786
BseBI CCWGG 6 cut(s) 202, 618, 753, 1276, 1459, 1481
BseDI CCNNGG 1 cut(s) 1170
BseGI GGATG 3 cut(s) 191, 1603, 1783
BseLI CCNNNNNNNGG 3 cut(s) 201, 407, 686
BseMII CTCAG 3 cut(s) 153, 696, 1508
BseNI ACTGG 2 cut(s) 945, 1341
BseRI GAGGAG 2 cut(s) 587, 1722
BseXI GCAGC 3 cut(s) 536, 655, 1697
BseYI CCCAGC 1 cut(s) 275
BsgI GTGCAG 1 cut(s) 1653
Bsh1236I CGCG 3 cut(s) 507, 1154, 1754
BshFI GGCC 1 cut(s) 967
BshNI GGYRCC 1 cut(s) 1256
BsiHKAI GWGCWC 2 cut(s) 1287, 1438
BsiSI CCGG 3 cut(s) 185, 984, 1787
BslI CCNNNNNNNGG 3 cut(s) 201, 407, 686
BsmAI GTCTC 5 cut(s) 248, 495, 1212, 1409, 1577
BsmI GAATGC 1 cut(s) 81
BsnI GGCC 1 cut(s) 967
Bso31I GGTCTC 1 cut(s) 495
Bsp119I TTCGAA 1 cut(s) 587
Bsp1286I GDGCHC 2 cut(s) 1287, 1438
Bsp13I TCCGGA 1 cut(s) 1786
Bsp143I GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
BspACI CCGC 4 cut(s) 291, 505, 1211, 1754
BspANI GGCC 1 cut(s) 967
BspCNI CTCAG 3 cut(s) 154, 697, 1507
BspEI TCCGGA 1 cut(s) 1786
BspFNI CGCG 3 cut(s) 507, 1154, 1754
BspLI GGNNCC 4 cut(s) 853, 966, 1258, 1273
BspMAI CTGCAG 1 cut(s) 313
BspMI ACCTGC 1 cut(s) 542
BspPI GGATC 2 cut(s) 1319, 1471
BspT104I TTCGAA 1 cut(s) 587
BspT107I GGYRCC 1 cut(s) 1256
BspTNI GGTCTC 1 cut(s) 495
BsrI ACTGG 2 cut(s) 945, 1341
BssECI CCNNGG 1 cut(s) 1170
BssMI GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
BssT1I CCWWGG 1 cut(s) 1170
Bst2UI CCWGG 6 cut(s) 202, 618, 753, 1276, 1459, 1481
Bst4CI ACNGT 6 cut(s) 464, 599, 734, 978, 1122, 1470
Bst6I CTCTTC 3 cut(s) 108, 841, 1125
BstBI TTCGAA 1 cut(s) 587
BstC8I GCNNGC 2 cut(s) 509, 1858
BstDEI CTNAG 4 cut(s) 162, 705, 1494, 1702
BstF5I GGATG 3 cut(s) 191, 1603, 1783
BstFNI CGCG 3 cut(s) 507, 1154, 1754
BstKTI GATC 6 cut(s) 59, 649, 784, 1320, 1327, 1479
BstMAI GTCTC 5 cut(s) 248, 495, 1212, 1409, 1577
BstMBI GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
BstMWI GCNNNNNNNGC 3 cut(s) 557, 1490, 1657
BstNI CCWGG 6 cut(s) 202, 618, 753, 1276, 1459, 1481
BstNSI RCATGY 2 cut(s) 1250, 1531
BstSCI CCNGG 8 cut(s) 184, 200, 616, 751, 982, 1274, 1457, 1479
BstSFI CTRYAG 1 cut(s) 309
BstUI CGCG 3 cut(s) 507, 1154, 1754
BstV1I GCAGC 3 cut(s) 536, 655, 1697
BstV2I GAAGAC 2 cut(s) 912, 1197
BstX2I RGATCY 1 cut(s) 1476
BstXI CCANNNNNNTGG 1 cut(s) 1268
BstYI RGATCY 1 cut(s) 1476
BsuRI GGCC 1 cut(s) 967
BtsCI GGATG 3 cut(s) 191, 1603, 1783
BtsI GCAGTG 3 cut(s) 100, 518, 924
BtsIMutI CAGTG 8 cut(s) 100, 518, 595, 730, 924, 974, 1118, 1348
BveI ACCTGC 1 cut(s) 542
Cac8I GCNNGC 2 cut(s) 509, 1858
CaiI CAGNNNCTG 1 cut(s) 1376
Cfr13I GGNCC 3 cut(s) 581, 716, 965
CseI GACGC 1 cut(s) 1202
CsiI ACCWGGT 1 cut(s) 751
Csp6I GTAC 4 cut(s) 189, 1359, 1368, 1748
CviQI GTAC 4 cut(s) 189, 1359, 1368, 1748
DdeI CTNAG 4 cut(s) 162, 705, 1494, 1702
DpnI GATC 6 cut(s) 58, 648, 783, 1319, 1326, 1478
DpnII GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
Eam1104I CTCTTC 3 cut(s) 108, 841, 1125
EarI CTCTTC 3 cut(s) 108, 841, 1125
EciI GGCGGA 1 cut(s) 1200
Eco130I CCWWGG 1 cut(s) 1170
Eco31I GGTCTC 1 cut(s) 495
Eco47I GGWCC 2 cut(s) 581, 716
EcoO109I RGGNCCY 1 cut(s) 965
EcoRII CCWGG 6 cut(s) 200, 616, 751, 1274, 1457, 1479
EcoT14I CCWWGG 1 cut(s) 1170
ErhI CCWWGG 1 cut(s) 1170
FbaI TGATCA 2 cut(s) 646, 781
Fnu4HI GCNGC 4 cut(s) 525, 669, 1686, 1755
FokI GGATG 3 cut(s) 178, 1610, 1770
Fsp4HI GCNGC 4 cut(s) 525, 669, 1686, 1755
FspBI CTAG 1 cut(s) 1062
GluI GCNGC 4 cut(s) 525, 669, 1686, 1755
GsaI CCCAGC 1 cut(s) 279
HaeIII GGCC 1 cut(s) 967
HapII CCGG 3 cut(s) 185, 984, 1787
HgaI GACGC 1 cut(s) 1202
HindIII AAGCTT 2 cut(s) 1847, 1877
HinfI GANTC 9 cut(s) 43, 164, 209, 589, 864, 1135, 1304, 1454, 1708
HpaII CCGG 3 cut(s) 185, 984, 1787
HphI GGTGA 4 cut(s) 833, 972, 1116, 1820
Hpy166II GTNNAC 2 cut(s) 1346, 1750
Hpy188I TCNGA 8 cut(s) 51, 270, 433, 454, 469, 702, 749, 1497
Hpy8I GTNNAC 2 cut(s) 1346, 1750
Hpy99I CGWCG 1 cut(s) 1154
HpyCH4III ACNGT 6 cut(s) 464, 599, 734, 978, 1122, 1470
HpyCH4IV ACGT 4 cut(s) 61, 653, 1149, 1504
HpyF10VI GCNNNNNNNGC 3 cut(s) 557, 1490, 1657
HpyF3I CTNAG 4 cut(s) 162, 705, 1494, 1702
HpySE526I ACGT 4 cut(s) 61, 653, 1149, 1504
Kpn2I TCCGGA 1 cut(s) 1786
Ksp22I TGATCA 2 cut(s) 646, 781
Kzo9I GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
LmnI GCTCC 5 cut(s) 187, 851, 1271, 1378, 1891
Lsp1109I GCAGC 3 cut(s) 536, 655, 1697
LweI GCATC 4 cut(s) 28, 80, 1205, 1805
MabI ACCWGGT 1 cut(s) 751
MaeI CTAG 1 cut(s) 1062
MaeII ACGT 4 cut(s) 61, 653, 1149, 1504
MaeIII GTNAC 9 cut(s) 293, 443, 458, 599, 734, 978, 1122, 1470, 1808
MalI GATC 6 cut(s) 58, 648, 783, 1319, 1326, 1478
MboI GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
MfeI CAATTG 1 cut(s) 1380
MflI RGATCY 1 cut(s) 1476
MhlI GDGCHC 2 cut(s) 1287, 1438
MluCI AATT 9 cut(s) 335, 607, 742, 931, 1202, 1380, 1778, 1841, 1871
MlyI GAGTC 3 cut(s) 173, 218, 1463
MmeI TCCRAC 1 cut(s) 1518
MroI TCCGGA 1 cut(s) 1786
MroXI GAANNNNTTC 1 cut(s) 264
MseI TTAA 5 cut(s) 1068, 1395, 1653, 1677, 1875
MslI CAYNNNNRTG 2 cut(s) 498, 1613
MspI CCGG 3 cut(s) 185, 984, 1787
MspR9I CCNGG 8 cut(s) 186, 202, 618, 753, 984, 1276, 1459, 1481
MunI CAATTG 1 cut(s) 1380
Mva1269I GAATGC 1 cut(s) 81
MvaI CCWGG 6 cut(s) 202, 618, 753, 1276, 1459, 1481
MvnI CGCG 3 cut(s) 507, 1154, 1754
MwoI GCNNNNNNNGC 3 cut(s) 557, 1490, 1657
NciI CCSGG 2 cut(s) 186, 984
NdeII GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
NlaIV GGNNCC 4 cut(s) 853, 966, 1258, 1273
NmeAIII GCCGAG 1 cut(s) 246
NmuCI GTSAC 7 cut(s) 443, 458, 599, 734, 978, 1122, 1808
NspI RCATGY 2 cut(s) 1250, 1531
NspV TTCGAA 1 cut(s) 587
PctI GAATGC 1 cut(s) 81
PdmI GAANNNNTTC 1 cut(s) 264
PfeI GAWTC 6 cut(s) 43, 589, 864, 1135, 1304, 1708
PflMI CCANNNNNTGG 1 cut(s) 686
PkrI GCNGC 4 cut(s) 526, 670, 1687, 1756
PleI GAGTC 3 cut(s) 172, 217, 1462
PpsI GAGTC 3 cut(s) 172, 217, 1462
Psp6I CCWGG 6 cut(s) 200, 616, 751, 1274, 1457, 1479
PspFI CCCAGC 1 cut(s) 275
PspGI CCWGG 6 cut(s) 200, 616, 751, 1274, 1457, 1479
PspN4I GGNNCC 4 cut(s) 853, 966, 1258, 1273
PspPI GGNCC 3 cut(s) 581, 716, 965
PstI CTGCAG 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 1376
PsuI RGATCY 1 cut(s) 1476
RsaI GTAC 4 cut(s) 190, 1360, 1369, 1749
RsaNI GTAC 4 cut(s) 189, 1359, 1368, 1748
RseI CAYNNNNRTG 2 cut(s) 498, 1613
SaqAI TTAA 5 cut(s) 1068, 1395, 1653, 1677, 1875
SatI GCNGC 4 cut(s) 525, 669, 1686, 1755
Sau3AI GATC 6 cut(s) 56, 646, 781, 1317, 1324, 1476
Sau96I GGNCC 3 cut(s) 581, 716, 965
SchI GAGTC 3 cut(s) 173, 218, 1463
ScrFI CCNGG 8 cut(s) 186, 202, 618, 753, 984, 1276, 1459, 1481
SduI GDGCHC 2 cut(s) 1287, 1438
SexAI ACCWGGT 1 cut(s) 751
SfaNI GCATC 4 cut(s) 28, 80, 1205, 1805
SfcI CTRYAG 1 cut(s) 309
SfuI TTCGAA 1 cut(s) 587
SinI GGWCC 2 cut(s) 581, 716
SmiMI CAYNNNNRTG 2 cut(s) 498, 1613
SmlI CTYRAG 2 cut(s) 532, 1667
SmoI CTYRAG 2 cut(s) 532, 1667
SpeI ACTAGT 1 cut(s) 1061
Sse9I AATT 9 cut(s) 335, 607, 742, 931, 1202, 1380, 1778, 1841, 1871
SsiI CCGC 4 cut(s) 291, 505, 1211, 1754
SspMI CTAG 1 cut(s) 1062
StyD4I CCNGG 8 cut(s) 184, 200, 616, 751, 982, 1274, 1457, 1479
StyI CCWWGG 1 cut(s) 1170
TaaI ACNGT 6 cut(s) 464, 599, 734, 978, 1122, 1470
TaiI ACGT 4 cut(s) 64, 656, 1152, 1507
TaqI TCGA 4 cut(s) 415, 587, 612, 1696
TasI AATT 9 cut(s) 335, 607, 742, 931, 1202, 1380, 1778, 1841, 1871
TauI GCSGC 1 cut(s) 1757
TfiI GAWTC 6 cut(s) 43, 589, 864, 1135, 1304, 1708
Tru1I TTAA 5 cut(s) 1068, 1395, 1653, 1677, 1875
Tru9I TTAA 5 cut(s) 1068, 1395, 1653, 1677, 1875
TscAI CASTG 8 cut(s) 100, 518, 602, 737, 931, 981, 1125, 1348
TseFI GTSAC 7 cut(s) 443, 458, 599, 734, 978, 1122, 1808
TseI GCWGC 3 cut(s) 524, 668, 1685
Tsp45I GTSAC 7 cut(s) 443, 458, 599, 734, 978, 1122, 1808
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 8 cut(s) 100, 518, 602, 737, 931, 981, 1125, 1348
Van91I CCANNNNNTGG 1 cut(s) 686
VpaK11BI GGWCC 2 cut(s) 581, 716
XapI RAATTY 3 cut(s) 1778, 1841, 1871
XceI RCATGY 2 cut(s) 1250, 1531
XmnI GAANNNNTTC 1 cut(s) 264
XspI CTAG 1 cut(s) 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.