Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006214

Physical Location & Seq

Genomic Coordinates Forward (+)

3986298 .. 3990303

Gene Structure 4006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1056900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGAGAAGGAGAGGGCCATCAGGAGAATTTTCTGAACTCAGAAGTTGTTCTGGGAAGAAAACTGTAGAAAGTTGTAAGGCTAAAAGGGATGCTGATAAATTTGTGTTCATTGATCTTGAGTGTGAAGATCTCATCGACATCGATTATCTGGAATCTTTGCAGGCAAAGTCACGAGGTTCCAGTACATTGAGAAAAGACAGAGAATTTAAGTCTAGTAGTTTCATATATATAGATGATGATGAAGATAATTTTGCAAGTCCTGTAATCACTGTTGAGGATGTTGGGGACCTCGATAGTGATGCCACTTCAAGCAAAAGTTCTTTTCTTGGTTCTAGGAAGAGTTCTGTAACCTCAGATGGTGATGAATGTCGGGGTGTCCAGGAAAAGGTTTCTCCAGTAAAGGGGTCAAAGTGCAAGCAAACCCACTCTGGTGGAGCTCCTAGCGGGAATTGTTATGGTTTCGGTTTTGAGTCTGAGAGTTGTTCGTCTGATAGTGATTATTCTGATTGCGAGCTGATAGAAGGTTCTTATGGGAAGCTTCATCAACATTGGGAAGAAGTTTCCCAAAAGAGAAAACATTTTGTTCATAATGGCCAGTCTGGTTCAGATGGTCAATTTAGTGGATCTGGATCTCATAGTGAAACCCATGCTAATGCTGAAGTAGAGAATAGGGCAGCACCTGGAGATGTCCCTGTTTGTTCAAGTTCTAAAAGTGGAAATCATGAAAAGGAAAACCTTCCAAACTTTATGGGTACTCATGATGGCAACGCTGAGGGTAGTTCTTTGGATCCCCAAATGGATGGTCCTTTTGTTGAATCCAATCGGAACGCCGCTAAAGAAGATCCTCTTATTTATGAGTGGCAGAGTTTCCAAACTGATGGCATGGCCGGTTTATGGAATGAAGGAGAACAAAGTCATGAAGAGCATCCTTTGTCGTCAGAACTAGGCGGTAAATGGTCTAAATATCCAGGGACTTGTTTTATGGGTAATGGGCAAAAATTTAGGGGTGAAACCAATGATGATCAAAGAAAAGCTACTGTTTCGAATAAGGAAGAATCTTTTGGCAAGAACCAACTTTCTGATGAAATGCCTAGTGACCACGATAGAGTTGAACTAAGGGGCAAGGATGGTGAATTTCATGATGCTCCTTCTAGTTATGAGGAAAAAGACAATGCAGTTTCTGGTCAACAATTTGATGAAACGCAGATGGATAGTGGGCATGCTCCTTCCGAAGACAAACTTGGCGCTCATAAAAAAACTTATTGCCAGGATAAAGCTAGTGCTAACTTTGAGGAAGTATCTTTGGGCAACACCTCATTTCAGGGAACTAGTAATCAGGGGGGATTTGATTCAGCAAGAGGGAAAGAATCATGTGATTTGAGGGATCAGTTACCTGCTGAGGATGGCTATGTGAGTCCTGTTCGAAGAGATACAGCCATTGTTGGAAGTGATTTAATCACTGATCGAGAAAAGCACAAGGAGACTGCTGAATACAAGCGAGCAATAGAAGAAGAAATGGAATCCAGGAAGCGAGTCTTACAAATTCAGGCAGAAGAGGCACAAAGATTACGGAAAAGGAGAAAGGCAGAAAGCATGCGTTTATTGGATATGCAGAGAAGGCAAAAGCAACGTGTGGAAGAAGTAAGAGAGACGCAAAAGAAGGATGAAGAAAATTTAAATTTGAAAGACCAACTTCGTGCTGAAGTGAGGAAGGAGCTTAAAAGATTGGAATTGACATGCATAGATATGGCTTCTTTGCTTCGTGGCCTAGGAATACAAGTGGGGGCTGATTTCCGTCCTTTGCCCAATGAGGTGCACGCAGCGTATAAACGGGCATTGCTGAAATTTCACCCAGACCGGGCATCAAGAAGTGACATACGCGAGCAAGTTGAAGCCGAGGAGAAGTTTAAGCTTATATCACGCATGAAGGAAAAACTTCTACCGACTTCATGTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

653

Amino Acids

72.98

Weight (kDa)

5.27

Isoelectric Point (pI)

51.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69060
fragaria_vesca	FvH4_4g29350 FvH4_4g29350 FvH4_4g29350
malus_domestica	MD13G1056900.v1.1 MD16G1056300.v1.1
prunus_persica	Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1
pyrus_communis	pycom13g05080 pycom16g04930
rosa_chinensis	RchiOBHm_Chr4g0437421
rosa_laevigata	RLG00000006438
rosa_multiflora	Rmu_co8026288.1_g000001 Rmu_co8466195.1_g000001 Rmu_sc0006744.1_g000002 Rmu_sc0008352.1_g000003
rosa_roxburghii	Rroxscaffold_5G00378660
rosa_rugosa	Rorug04G0301400 Rorug04G0301500
rosa_samantha	Rh4AG355500 Rh4BG365900 Rh4CG380000 Rh4DG359600
rosa_wichuraiana	Rw4G031210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1402
AccII	CGCG	1 cut(s)	1881
AciI	CCGC	3 cut(s)	444, 831, 948
AclWI	GGATC	6 cut(s)	631, 637, 782, 795, 836, 1392
AcoI	YGGCCR	2 cut(s)	592, 885
AcsI	RAATTY	9 cut(s)	26, 98, 203, 998, 1133, 1542, 1672, 1678, 1844
AcuI	CTGAAG	2 cut(s)	678, 1722
AfaI	GTAC	2 cut(s)	184, 754
AfiI	CCNNNNNNNGG	4 cut(s)	385, 401, 894, 1858
AflIII	ACRYGT	1 cut(s)	1630
AgsI	TTSAA	6 cut(s)	309, 702, 815, 1112, 1684, 1892
AhlI	ACTAGT	1 cut(s)	1328
AjnI	CCWGG	5 cut(s)	378, 679, 967, 1266, 1523
AjuI	GAANNNNNNNTTGG	4 cut(s)	1044, 1076, 1224, 1256
AleI	CACNNNNGTG	1 cut(s)	429
AluBI	AGCT	7 cut(s)	437, 514, 538, 1034, 1277, 1717, 1912
AluI	AGCT	7 cut(s)	437, 514, 538, 1034, 1277, 1717, 1912
Alw21I	GWGCWC	2 cut(s)	439, 1818
Alw26I	GTCTC	2 cut(s)	1475, 1643
Alw44I	GTGCAC	1 cut(s)	1814
AlwI	GGATC	6 cut(s)	631, 637, 782, 795, 836, 1392
AlwNI	CAGNNNCTG	2 cut(s)	680, 1181
AoxI	GGCC	4 cut(s)	14, 592, 885, 1765
ApaLI	GTGCAC	1 cut(s)	1814
ApeKI	GCWGC	2 cut(s)	674, 1820
ApoI	RAATTY	9 cut(s)	26, 98, 203, 998, 1133, 1542, 1672, 1678, 1844
ArsI	GACNNNNNNTTYG	2 cut(s)	787, 819
Asp700I	GAANNNNTTC	3 cut(s)	46, 735, 1935
AspA2I	CCTAGG	1 cut(s)	1768
AspLEI	GCGC	1 cut(s)	1247
AspS9I	GGNCC	3 cut(s)	14, 286, 803
AsuC2I	CCSGG	1 cut(s)	1859
AsuHPI	GGTGA	4 cut(s)	371, 1019, 1142, 1841
AsuII	TTCGAA	2 cut(s)	1043, 1423
AvaII	GGWCC	2 cut(s)	286, 803
AvrII	CCTAGG	1 cut(s)	1768
BaeGI	GKGCMC	1 cut(s)	1818
BalI	TGGCCA	1 cut(s)	594
BamHI	GGATCC	1 cut(s)	787
BanII	GRGCYC	1 cut(s)	439
BauI	CACGAG	1 cut(s)	171
BbsI	GAAGAC	1 cut(s)	1239
Bbv12I	GWGCWC	2 cut(s)	439, 1818
BbvCI	CCTCAGC	2 cut(s)	771, 1398
BbvI	GCAGC	2 cut(s)	686, 1832
BccI	CCATC	9 cut(s)	25, 350, 602, 755, 794, 872, 1121, 1201, 1397
BcgI	CGANNNNNNTGC	2 cut(s)	281, 315
BciT130I	CCWGG	5 cut(s)	380, 681, 969, 1268, 1525
BclI	TGATCA	1 cut(s)	1021
BcnI	CCSGG	1 cut(s)	1859
BcoDI	GTCTC	2 cut(s)	1475, 1643
BcuI	ACTAGT	1 cut(s)	1328
BfaI	CTAG	9 cut(s)	213, 333, 441, 944, 1092, 1152, 1278, 1329, 1769
BfmI	CTRYAG	1 cut(s)	63
BfoI	RGCGCY	1 cut(s)	1248
BfuAI	ACCTGC	1 cut(s)	1402
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	3 cut(s)	675, 831, 1821
BlnI	CCTAGG	1 cut(s)	1768
BlsI	GCNGC	3 cut(s)	676, 832, 1822
Bme1390I	CCNGG	6 cut(s)	380, 681, 969, 1268, 1525, 1859
Bme18I	GGWCC	2 cut(s)	286, 803
BmgT120I	GGNCC	3 cut(s)	14, 286, 803
BmiI	GGNNCC	3 cut(s)	178, 287, 789
BmrFI	CCNGG	6 cut(s)	380, 681, 969, 1268, 1525, 1859
BmsI	GCATC	5 cut(s)	79, 289, 934, 1132, 1871
BpiI	GAAGAC	1 cut(s)	1239
BpmI	CTGGAG	2 cut(s)	378, 702
Bpu10I	CCTNAGC	2 cut(s)	771, 1398
Bpu14I	TTCGAA	2 cut(s)	1043, 1423
BpuEI	CTTGAG	1 cut(s)	137
BpuMI	CCSGG	1 cut(s)	1859
Bsa29I	ATCGAT	1 cut(s)	141
BsaBI	GATNNNNATC	1 cut(s)	628
BsaJI	CCNNGG	3 cut(s)	968, 1768, 1896
Bsc4I	CCNNNNNNNGG	4 cut(s)	385, 401, 894, 1858
Bse118I	RCCGGY	1 cut(s)	887
Bse1I	ACTGG	3 cut(s)	180, 395, 595
Bse3DI	GCAATG	1 cut(s)	1835
Bse8I	GATNNNNATC	1 cut(s)	628
BseBI	CCWGG	5 cut(s)	380, 681, 969, 1268, 1525
BseCI	ATCGAT	1 cut(s)	141
BseDI	CCNNGG	3 cut(s)	968, 1768, 1896
BseGI	GGATG	7 cut(s)	94, 283, 805, 925, 1132, 1408, 1669
BseJI	GATNNNNATC	1 cut(s)	628
BseLI	CCNNNNNNNGG	4 cut(s)	385, 401, 894, 1858
BseMI	GCAATG	1 cut(s)	1835
BseMII	CTCAG	5 cut(s)	52, 366, 465, 762, 1389
BseNI	ACTGG	3 cut(s)	180, 395, 595
BseRI	GAGGAG	1 cut(s)	1913
BseSI	GKGCMC	1 cut(s)	1818
BseXI	GCAGC	2 cut(s)	686, 1832
Bsh1236I	CGCG	1 cut(s)	1881
BshFI	GGCC	4 cut(s)	16, 594, 887, 1767
BshVI	ATCGAT	1 cut(s)	141
BsiHKAI	GWGCWC	2 cut(s)	439, 1818
BsiSI	CCGG	2 cut(s)	888, 1858
BslFI	GGGAC	3 cut(s)	299, 674, 985
BslI	CCNNNNNNNGG	4 cut(s)	385, 401, 894, 1858
BsmAI	GTCTC	2 cut(s)	1475, 1643
BsmBI	CGTCTC	1 cut(s)	1643
BsmFI	GGGAC	3 cut(s)	299, 674, 985
BsnI	GGCC	4 cut(s)	16, 594, 887, 1767
Bsp119I	TTCGAA	2 cut(s)	1043, 1423
Bsp1286I	GDGCHC	2 cut(s)	439, 1818
Bsp143I	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
BspACI	CCGC	3 cut(s)	444, 831, 948
BspANI	GGCC	4 cut(s)	16, 594, 887, 1767
BspCNI	CTCAG	5 cut(s)	51, 365, 466, 763, 1390
BspDI	ATCGAT	1 cut(s)	141
BspFNI	CGCG	1 cut(s)	1881
BspHI	TCATGA	4 cut(s)	721, 757, 916, 1138
BspLI	GGNNCC	3 cut(s)	178, 287, 789
BspMI	ACCTGC	1 cut(s)	1402
BspPI	GGATC	6 cut(s)	631, 637, 782, 795, 836, 1392
BspQI	GCTCTTC	1 cut(s)	915
BspT104I	TTCGAA	2 cut(s)	1043, 1423
BsrDI	GCAATG	1 cut(s)	1835
BsrFI	RCCGGY	1 cut(s)	887
BsrI	ACTGG	3 cut(s)	180, 395, 595
BssAI	RCCGGY	1 cut(s)	887
BssECI	CCNNGG	3 cut(s)	968, 1768, 1896
BssMI	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
BssSI	CACGAG	1 cut(s)	171
BssT1I	CCWWGG	1 cut(s)	1768
Bst2BI	CACGAG	1 cut(s)	171
Bst2UI	CCWGG	5 cut(s)	380, 681, 969, 1268, 1525
Bst4CI	ACNGT	3 cut(s)	64, 271, 1039
Bst6I	CTCTTC	4 cut(s)	332, 915, 1420, 1548
BstBI	TTCGAA	2 cut(s)	1043, 1423
BstC8I	GCNNGC	8 cut(s)	162, 416, 512, 1221, 1500, 1595, 1818, 1883
BstDEI	CTNAG	6 cut(s)	38, 352, 474, 771, 1115, 1398
BstF5I	GGATG	7 cut(s)	94, 283, 805, 925, 1132, 1408, 1669
BstFNI	CGCG	1 cut(s)	1881
BstH2I	RGCGCY	1 cut(s)	1248
BstHHI	GCGC	1 cut(s)	1247
BstKTI	GATC	9 cut(s)	115, 130, 626, 632, 790, 844, 1024, 1387, 1465
BstMAI	GTCTC	2 cut(s)	1475, 1643
BstMBI	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
BstMWI	GCNNNNNNNGC	2 cut(s)	1556, 1618
BstNI	CCWGG	5 cut(s)	380, 681, 969, 1268, 1525
BstNSI	RCATGY	3 cut(s)	1223, 1597, 1740
BstSCI	CCNGG	6 cut(s)	378, 679, 967, 1266, 1523, 1857
BstSFI	CTRYAG	1 cut(s)	63
BstSLI	GKGCMC	1 cut(s)	1818
BstUI	CGCG	1 cut(s)	1881
BstV1I	GCAGC	2 cut(s)	686, 1832
BstV2I	GAAGAC	1 cut(s)	1239
BstX2I	RGATCY	5 cut(s)	127, 623, 629, 787, 841
BstXI	CCANNNNNNTGG	3 cut(s)	431, 800, 878
BstYI	RGATCY	5 cut(s)	127, 623, 629, 787, 841
Bsu15I	ATCGAT	1 cut(s)	141
BsuRI	GGCC	4 cut(s)	16, 594, 887, 1767
BsuTUI	ATCGAT	1 cut(s)	141
BtsCI	GGATG	7 cut(s)	94, 283, 805, 925, 1132, 1408, 1669
BtsIMutI	CAGTG	2 cut(s)	267, 1458
BveI	ACCTGC	1 cut(s)	1402
Cac8I	GCNNGC	8 cut(s)	162, 416, 512, 1221, 1500, 1595, 1818, 1883
CaiI	CAGNNNCTG	2 cut(s)	680, 1181
CciI	TCATGA	4 cut(s)	721, 757, 916, 1138
CfoI	GCGC	1 cut(s)	1247
Cfr10I	RCCGGY	1 cut(s)	887
Cfr13I	GGNCC	3 cut(s)	14, 286, 803
ClaI	ATCGAT	1 cut(s)	141
CseI	GACGC	1 cut(s)	1660
Csp6I	GTAC	2 cut(s)	183, 753
CviQI	GTAC	2 cut(s)	183, 753
DdeI	CTNAG	6 cut(s)	38, 352, 474, 771, 1115, 1398
DpnI	GATC	9 cut(s)	114, 129, 625, 631, 789, 843, 1023, 1386, 1464
DpnII	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
DraI	TTTAAA	1 cut(s)	1677
EaeI	YGGCCR	2 cut(s)	592, 885
Eam1104I	CTCTTC	4 cut(s)	332, 915, 1420, 1548
EarI	CTCTTC	4 cut(s)	332, 915, 1420, 1548
Ecl136II	GAGCTC	1 cut(s)	437
Eco130I	CCWWGG	1 cut(s)	1768
Eco24I	GRGCYC	1 cut(s)	439
Eco47I	GGWCC	2 cut(s)	286, 803
Eco53kI	GAGCTC	1 cut(s)	437
Eco57I	CTGAAG	2 cut(s)	678, 1722
EcoICRI	GAGCTC	1 cut(s)	437
EcoO109I	RGGNCCY	1 cut(s)	286
EcoRII	CCWGG	5 cut(s)	378, 679, 967, 1266, 1523
EcoT14I	CCWWGG	1 cut(s)	1768
EcoT22I	ATGCAT	1 cut(s)	1742
EcoT38I	GRGCYC	1 cut(s)	439
ErhI	CCWWGG	1 cut(s)	1768
Esp3I	CGTCTC	1 cut(s)	1643
FalI	AAGNNNNNCTT	8 cut(s)	831, 863, 1224, 1256, 1520, 1552, 1677, 1709
FaqI	GGGAC	3 cut(s)	299, 674, 985
FauI	CCCGC	1 cut(s)	437
FbaI	TGATCA	1 cut(s)	1021
Fnu4HI	GCNGC	3 cut(s)	675, 831, 1821
FokI	GGATG	7 cut(s)	101, 290, 812, 912, 1139, 1415, 1676
FriOI	GRGCYC	1 cut(s)	439
Fsp4HI	GCNGC	3 cut(s)	675, 831, 1821
FspBI	CTAG	9 cut(s)	213, 333, 441, 944, 1092, 1152, 1278, 1329, 1769
GlaI	GCGC	1 cut(s)	1246
GluI	GCNGC	3 cut(s)	675, 831, 1821
GsuI	CTGGAG	2 cut(s)	378, 702
HaeII	RGCGCY	1 cut(s)	1248
HaeIII	GGCC	4 cut(s)	16, 594, 887, 1767
HapII	CCGG	2 cut(s)	888, 1858
HgaI	GACGC	1 cut(s)	1660
HhaI	GCGC	1 cut(s)	1247
Hin6I	GCGC	1 cut(s)	1245
HinP1I	GCGC	1 cut(s)	1245
HincII	GTYRAC	1 cut(s)	1187
HindII	GTYRAC	1 cut(s)	1187
HindIII	AAGCTT	2 cut(s)	536, 1910
HinfI	GANTC	9 cut(s)	152, 470, 815, 1055, 1349, 1367, 1414, 1520, 1533
HpaII	CCGG	2 cut(s)	888, 1858
HphI	GGTGA	4 cut(s)	371, 1019, 1142, 1841
Hpy166II	GTNNAC	2 cut(s)	1187, 1816
Hpy8I	GTNNAC	2 cut(s)	1187, 1816
HpyAV	CCTTC	9 cut(s)	515, 746, 896, 1158, 1236, 1611, 1654, 1705, 1921
HpyCH4III	ACNGT	3 cut(s)	64, 271, 1039
HpyCH4IV	ACGT	1 cut(s)	1630
HpyCH4V	TGCA	7 cut(s)	160, 254, 414, 1175, 1612, 1740, 1816
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1556, 1618
HpyF3I	CTNAG	6 cut(s)	38, 352, 474, 771, 1115, 1398
HpySE526I	ACGT	1 cut(s)	1630
HspAI	GCGC	1 cut(s)	1245
Ksp22I	TGATCA	1 cut(s)	1021
Kzo9I	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
LguI	GCTCTTC	1 cut(s)	915
LmnI	GCTCC	5 cut(s)	434, 442, 1150, 1228, 1714
Lsp1109I	GCAGC	2 cut(s)	686, 1832
LweI	GCATC	5 cut(s)	79, 289, 934, 1132, 1871
MaeI	CTAG	9 cut(s)	213, 333, 441, 944, 1092, 1152, 1278, 1329, 1769
MaeII	ACGT	1 cut(s)	1630
MaeIII	GTNAC	6 cut(s)	168, 346, 1094, 1389, 1871, 1952
MalI	GATC	9 cut(s)	114, 129, 625, 631, 789, 843, 1023, 1386, 1464
MboI	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
MflI	RGATCY	5 cut(s)	127, 623, 629, 787, 841
MhlI	GDGCHC	2 cut(s)	439, 1818
MlsI	TGGCCA	1 cut(s)	594
MluNI	TGGCCA	1 cut(s)	594
MlyI	GAGTC	3 cut(s)	479, 1423, 1542
MmeI	TCCRAC	1 cut(s)	1423
Mox20I	TGGCCA	1 cut(s)	594
Mph1103I	ATGCAT	1 cut(s)	1742
MroXI	GAANNNNTTC	3 cut(s)	46, 735, 1935
MscI	TGGCCA	1 cut(s)	594
MseI	TTAA	5 cut(s)	207, 1454, 1676, 1719, 1908
MslI	CAYNNNNRTG	3 cut(s)	429, 651, 1745
Msp20I	TGGCCA	1 cut(s)	594
MspI	CCGG	2 cut(s)	888, 1858
MspR9I	CCNGG	6 cut(s)	380, 681, 969, 1268, 1525, 1859
MvaI	CCWGG	5 cut(s)	380, 681, 969, 1268, 1525
MvnI	CGCG	1 cut(s)	1881
MwoI	GCNNNNNNNGC	2 cut(s)	1556, 1618
NciI	CCSGG	1 cut(s)	1859
NdeII	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
NlaIV	GGNNCC	3 cut(s)	178, 287, 789
NmeAIII	GCCGAG	1 cut(s)	1921
NmuCI	GTSAC	3 cut(s)	168, 1094, 1871
NsiI	ATGCAT	1 cut(s)	1742
NspI	RCATGY	3 cut(s)	1223, 1597, 1740
NspV	TTCGAA	2 cut(s)	1043, 1423
OliI	CACNNNNGTG	1 cut(s)	429
PaeI	GCATGC	2 cut(s)	1223, 1597
PagI	TCATGA	4 cut(s)	721, 757, 916, 1138
PciSI	GCTCTTC	1 cut(s)	915
PdmI	GAANNNNTTC	3 cut(s)	46, 735, 1935
PfeI	GAWTC	6 cut(s)	152, 815, 1055, 1349, 1367, 1520
PfoI	TCCNGGA	2 cut(s)	378, 1523
PkrI	GCNGC	3 cut(s)	676, 832, 1822
PleI	GAGTC	3 cut(s)	478, 1422, 1541
PpsI	GAGTC	3 cut(s)	478, 1422, 1541
PpuMI	RGGWCCY	1 cut(s)	286
Psp124BI	GAGCTC	1 cut(s)	439
Psp5II	RGGWCCY	1 cut(s)	286
Psp6I	CCWGG	5 cut(s)	378, 679, 967, 1266, 1523
PspGI	CCWGG	5 cut(s)	378, 679, 967, 1266, 1523
PspN4I	GGNNCC	3 cut(s)	178, 287, 789
PspPI	GGNCC	3 cut(s)	14, 286, 803
PspPPI	RGGWCCY	1 cut(s)	286
PstNI	CAGNNNCTG	2 cut(s)	680, 1181
PsuI	RGATCY	5 cut(s)	127, 623, 629, 787, 841
RsaI	GTAC	2 cut(s)	184, 754
RsaNI	GTAC	2 cut(s)	183, 753
RseI	CAYNNNNRTG	3 cut(s)	429, 651, 1745
SacI	GAGCTC	1 cut(s)	439
SapI	GCTCTTC	1 cut(s)	915
SaqAI	TTAA	5 cut(s)	207, 1454, 1676, 1719, 1908
SatI	GCNGC	3 cut(s)	675, 831, 1821
Sau3AI	GATC	9 cut(s)	112, 127, 623, 629, 787, 841, 1021, 1384, 1462
Sau96I	GGNCC	3 cut(s)	14, 286, 803
SchI	GAGTC	3 cut(s)	479, 1423, 1542
ScrFI	CCNGG	6 cut(s)	380, 681, 969, 1268, 1525, 1859
SduI	GDGCHC	2 cut(s)	439, 1818
SfaNI	GCATC	5 cut(s)	79, 289, 934, 1132, 1871
SfcI	CTRYAG	1 cut(s)	63
SfuI	TTCGAA	2 cut(s)	1043, 1423
SinI	GGWCC	2 cut(s)	286, 803
SmiI	ATTTAAAT	1 cut(s)	1677
SmiMI	CAYNNNNRTG	3 cut(s)	429, 651, 1745
SmlI	CTYRAG	1 cut(s)	116
SmoI	CTYRAG	1 cut(s)	116
SpeI	ACTAGT	1 cut(s)	1328
SphI	GCATGC	2 cut(s)	1223, 1597
SsiI	CCGC	3 cut(s)	444, 831, 948
SspMI	CTAG	9 cut(s)	213, 333, 441, 944, 1092, 1152, 1278, 1329, 1769
SstI	GAGCTC	1 cut(s)	439
StyD4I	CCNGG	6 cut(s)	378, 679, 967, 1266, 1523, 1857
StyI	CCWWGG	1 cut(s)	1768
SwaI	ATTTAAAT	1 cut(s)	1677
TaaI	ACNGT	3 cut(s)	64, 271, 1039
TaiI	ACGT	1 cut(s)	1633
TaqI	TCGA	6 cut(s)	135, 141, 291, 1043, 1423, 1465
TatI	WGTACW	1 cut(s)	182
TauI	GCSGC	1 cut(s)	833
TfiI	GAWTC	6 cut(s)	152, 815, 1055, 1349, 1367, 1520
Tru1I	TTAA	5 cut(s)	207, 1454, 1676, 1719, 1908
Tru9I	TTAA	5 cut(s)	207, 1454, 1676, 1719, 1908
TscAI	CASTG	2 cut(s)	274, 1465
TseFI	GTSAC	3 cut(s)	168, 1094, 1871
TseI	GCWGC	2 cut(s)	674, 1820
Tsp45I	GTSAC	3 cut(s)	168, 1094, 1871
TspGWI	ACGGA	2 cut(s)	1585, 1784
TspRI	CASTG	2 cut(s)	274, 1465
VneI	GTGCAC	1 cut(s)	1814
VpaK11BI	GGWCC	2 cut(s)	286, 803
XapI	RAATTY	9 cut(s)	26, 98, 203, 998, 1133, 1542, 1672, 1678, 1844
XceI	RCATGY	3 cut(s)	1223, 1597, 1740
XmaJI	CCTAGG	1 cut(s)	1768
XmnI	GAANNNNTTC	3 cut(s)	46, 735, 1935
XspI	CTAG	9 cut(s)	213, 333, 441, 944, 1092, 1152, 1278, 1329, 1769
Zsp2I	ATGCAT	1 cut(s)	1742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.