DnaJ molecular chaperone homology domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69060 |
| fragaria_vesca | FvH4_4g29350 FvH4_4g29350 FvH4_4g29350 |
| malus_domestica | MD13G1056900.v1.1 MD16G1056300.v1.1 |
| prunus_persica | Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 |
| pyrus_communis | pycom13g05080 pycom16g04930 |
| rosa_chinensis | RchiOBHm_Chr4g0437421 |
| rosa_laevigata | RLG00000006438 |
| rosa_multiflora | Rmu_co8026288.1_g000001 Rmu_co8466195.1_g000001 Rmu_sc0006744.1_g000002 Rmu_sc0008352.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00378660 |
| rosa_rugosa | Rorug04G0301400 Rorug04G0301500 |
| rosa_samantha | Rh4AG355500 Rh4BG365900 Rh4CG380000 Rh4DG359600 |
| rosa_wichuraiana | Rw4G031210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 1015 |
| AccIII | TCCGGA | 1 cut(s) | 730 |
| AciI | CCGC | 4 cut(s) | 340, 483, 1015, 1624 |
| AclWI | GGATC | 5 cut(s) | 615, 628, 634, 917, 1252 |
| AcsI | RAATTY | 2 cut(s) | 200, 1638 |
| AcuI | CTGAAG | 3 cut(s) | 1020, 1341, 1512 |
| AfaI | GTAC | 2 cut(s) | 181, 208 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 38, 388, 404, 432, 737 |
| AflIII | ACRYGT | 2 cut(s) | 574, 1300 |
| AgsI | TTSAA | 4 cut(s) | 272, 693, 1147, 1541 |
| AjnI | CCWGG | 6 cut(s) | 31, 285, 381, 847, 1276, 1619 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1314, 1346 |
| Alw21I | GWGCWC | 1 cut(s) | 1516 |
| Alw26I | GTCTC | 1 cut(s) | 181 |
| AlwI | GGATC | 5 cut(s) | 615, 628, 634, 917, 1252 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1424 |
| Ama87I | CYCGRG | 1 cut(s) | 168 |
| Aor13HI | TCCGGA | 1 cut(s) | 730 |
| AoxI | GGCC | 1 cut(s) | 777 |
| ApeKI | GCWGC | 2 cut(s) | 157, 1282 |
| ApoI | RAATTY | 2 cut(s) | 200, 1638 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 836, 868 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 46, 1465 |
| AspS9I | GGNCC | 3 cut(s) | 283, 599, 1017 |
| AsuC2I | CCSGG | 1 cut(s) | 597 |
| AsuHPI | GGTGA | 3 cut(s) | 647, 1193, 1276 |
| AvaI | CYCGRG | 1 cut(s) | 168 |
| AvaII | GGWCC | 3 cut(s) | 283, 599, 1017 |
| Bbv12I | GWGCWC | 1 cut(s) | 1516 |
| BbvI | GCAGC | 2 cut(s) | 169, 1294 |
| BccI | CCATC | 4 cut(s) | 353, 406, 755, 953 |
| BceAI | ACGGC | 1 cut(s) | 1216 |
| BciT130I | CCWGG | 6 cut(s) | 33, 287, 383, 849, 1278, 1621 |
| BcnI | CCSGG | 1 cut(s) | 597 |
| BcoDI | GTCTC | 1 cut(s) | 181 |
| BfaI | CTAG | 5 cut(s) | 306, 615, 1031, 1248, 1344 |
| BfmI | CTRYAG | 2 cut(s) | 63, 334 |
| BisI | GCNGC | 3 cut(s) | 158, 1283, 1625 |
| BlsI | GCNGC | 3 cut(s) | 159, 1284, 1626 |
| BmcAI | AGTACT | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 7 cut(s) | 33, 287, 383, 597, 849, 1278, 1621 |
| Bme18I | GGWCC | 3 cut(s) | 283, 599, 1017 |
| BmeT110I | CYCGRG | 1 cut(s) | 168 |
| BmgT120I | GGNCC | 3 cut(s) | 283, 599, 1017 |
| BmiI | GGNNCC | 5 cut(s) | 175, 284, 320, 600, 681 |
| BmrFI | CCNGG | 7 cut(s) | 33, 287, 383, 597, 849, 1278, 1621 |
| BmsI | GCATC | 4 cut(s) | 226, 286, 972, 1668 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 995, 1027 |
| Bpu10I | CCTNAGC | 2 cut(s) | 822, 1076 |
| BpuEI | CTTGAG | 2 cut(s) | 1500, 1556 |
| BpuMI | CCSGG | 1 cut(s) | 597 |
| Bsa29I | ATCGAT | 2 cut(s) | 111, 144 |
| BsaBI | GATNNNNATC | 1 cut(s) | 625 |
| BsaJI | CCNNGG | 8 cut(s) | 32, 402, 848, 1020, 1109, 1198, 1277, 1330 |
| BsaWI | WCCGGW | 1 cut(s) | 730 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 38, 388, 404, 432, 737 |
| Bse1I | ACTGG | 1 cut(s) | 177 |
| Bse3DI | GCAATG | 1 cut(s) | 1605 |
| Bse8I | GATNNNNATC | 1 cut(s) | 625 |
| BseAI | TCCGGA | 1 cut(s) | 730 |
| BseBI | CCWGG | 6 cut(s) | 33, 287, 383, 849, 1278, 1621 |
| BseCI | ATCGAT | 2 cut(s) | 111, 144 |
| BseDI | CCNNGG | 8 cut(s) | 32, 402, 848, 1020, 1109, 1198, 1277, 1330 |
| BseGI | GGATG | 3 cut(s) | 398, 1087, 1451 |
| BseJI | GATNNNNATC | 1 cut(s) | 625 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 38, 388, 404, 432, 737 |
| BseMI | GCAATG | 1 cut(s) | 1605 |
| BseMII | CTCAG | 5 cut(s) | 369, 462, 468, 1090, 1416 |
| BseNI | ACTGG | 1 cut(s) | 177 |
| BseXI | GCAGC | 2 cut(s) | 169, 1294 |
| BseYI | CCCAGC | 1 cut(s) | 1034 |
| Bsh1236I | CGCG | 1 cut(s) | 1015 |
| BshFI | GGCC | 1 cut(s) | 779 |
| BshVI | ATCGAT | 2 cut(s) | 111, 144 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1516 |
| BsiHKCI | CYCGRG | 1 cut(s) | 168 |
| BsiSI | CCGG | 2 cut(s) | 596, 731 |
| BslFI | GGGAC | 3 cut(s) | 296, 448, 899 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 38, 388, 404, 432, 737 |
| BsmAI | GTCTC | 1 cut(s) | 181 |
| BsmFI | GGGAC | 3 cut(s) | 296, 448, 899 |
| BsmI | GAATGC | 1 cut(s) | 1006 |
| BsnI | GGCC | 1 cut(s) | 779 |
| BsoBI | CYCGRG | 1 cut(s) | 168 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1516 |
| Bsp13I | TCCGGA | 1 cut(s) | 730 |
| Bsp143I | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| BspACI | CCGC | 4 cut(s) | 340, 483, 1015, 1624 |
| BspANI | GGCC | 1 cut(s) | 779 |
| BspCNI | CTCAG | 5 cut(s) | 368, 463, 469, 1089, 1417 |
| BspDI | ATCGAT | 2 cut(s) | 111, 144 |
| BspEI | TCCGGA | 1 cut(s) | 730 |
| BspFNI | CGCG | 1 cut(s) | 1015 |
| BspHI | TCATGA | 2 cut(s) | 538, 745 |
| BspLI | GGNNCC | 5 cut(s) | 175, 284, 320, 600, 681 |
| BspPI | GGATC | 5 cut(s) | 615, 628, 634, 917, 1252 |
| BspQI | GCTCTTC | 3 cut(s) | 981, 996, 1146 |
| BsrDI | GCAATG | 1 cut(s) | 1605 |
| BsrI | ACTGG | 1 cut(s) | 177 |
| BssECI | CCNNGG | 8 cut(s) | 32, 402, 848, 1020, 1109, 1198, 1277, 1330 |
| BssMI | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| BssT1I | CCWWGG | 3 cut(s) | 402, 1109, 1330 |
| Bst2UI | CCWGG | 6 cut(s) | 33, 287, 383, 849, 1278, 1621 |
| Bst4CI | ACNGT | 4 cut(s) | 211, 259, 293, 643 |
| Bst6I | CTCTTC | 4 cut(s) | 267, 981, 996, 1146 |
| BstC8I | GCNNGC | 4 cut(s) | 419, 672, 945, 1596 |
| BstDEI | CTNAG | 7 cut(s) | 355, 471, 477, 822, 929, 1076, 1425 |
| BstDSI | CCRYGG | 2 cut(s) | 1020, 1198 |
| BstF5I | GGATG | 3 cut(s) | 398, 1087, 1451 |
| BstFNI | CGCG | 1 cut(s) | 1015 |
| BstKTI | GATC | 9 cut(s) | 108, 115, 610, 623, 629, 925, 1126, 1247, 1561 |
| BstMAI | GTCTC | 1 cut(s) | 181 |
| BstMBI | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1012 |
| BstNI | CCWGG | 6 cut(s) | 33, 287, 383, 849, 1278, 1621 |
| BstNSI | RCATGY | 5 cut(s) | 578, 674, 902, 1304, 1657 |
| BstSCI | CCNGG | 7 cut(s) | 31, 285, 381, 595, 847, 1276, 1619 |
| BstSFI | CTRYAG | 2 cut(s) | 63, 334 |
| BstUI | CGCG | 1 cut(s) | 1015 |
| BstV1I | GCAGC | 2 cut(s) | 169, 1294 |
| BstX2I | RGATCY | 4 cut(s) | 620, 626, 922, 1244 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 761, 1178 |
| BstYI | RGATCY | 4 cut(s) | 620, 626, 922, 1244 |
| Bsu15I | ATCGAT | 2 cut(s) | 111, 144 |
| BsuRI | GGCC | 1 cut(s) | 779 |
| BsuTUI | ATCGAT | 2 cut(s) | 111, 144 |
| BtgI | CCRYGG | 2 cut(s) | 1020, 1198 |
| BtsCI | GGATG | 3 cut(s) | 398, 1087, 1451 |
| BtsIMutI | CAGTG | 3 cut(s) | 298, 537, 1554 |
| Cac8I | GCNNGC | 4 cut(s) | 419, 672, 945, 1596 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1424 |
| CciI | TCATGA | 2 cut(s) | 538, 745 |
| Cfr13I | GGNCC | 3 cut(s) | 283, 599, 1017 |
| ClaI | ATCGAT | 2 cut(s) | 111, 144 |
| Csp6I | GTAC | 2 cut(s) | 180, 207 |
| CviQI | GTAC | 2 cut(s) | 180, 207 |
| DdeI | CTNAG | 7 cut(s) | 355, 471, 477, 822, 929, 1076, 1425 |
| DpnI | GATC | 9 cut(s) | 107, 114, 609, 622, 628, 924, 1125, 1246, 1560 |
| DpnII | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| Eam1104I | CTCTTC | 4 cut(s) | 267, 981, 996, 1146 |
| EarI | CTCTTC | 4 cut(s) | 267, 981, 996, 1146 |
| EciI | GGCGGA | 1 cut(s) | 355 |
| Eco130I | CCWWGG | 3 cut(s) | 402, 1109, 1330 |
| Eco32I | GATATC | 1 cut(s) | 151 |
| Eco47I | GGWCC | 3 cut(s) | 283, 599, 1017 |
| Eco57I | CTGAAG | 3 cut(s) | 1020, 1341, 1512 |
| Eco88I | CYCGRG | 1 cut(s) | 168 |
| EcoO109I | RGGNCCY | 1 cut(s) | 283 |
| EcoRII | CCWGG | 6 cut(s) | 31, 285, 381, 847, 1276, 1619 |
| EcoRV | GATATC | 1 cut(s) | 151 |
| EcoT14I | CCWWGG | 3 cut(s) | 402, 1109, 1330 |
| EcoT22I | ATGCAT | 2 cut(s) | 1062, 1659 |
| ErhI | CCWWGG | 3 cut(s) | 402, 1109, 1330 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 912, 944, 1314, 1346 |
| FaqI | GGGAC | 3 cut(s) | 296, 448, 899 |
| Fnu4HI | GCNGC | 3 cut(s) | 158, 1283, 1625 |
| FokI | GGATG | 3 cut(s) | 385, 1094, 1438 |
| Fsp4HI | GCNGC | 3 cut(s) | 158, 1283, 1625 |
| FspBI | CTAG | 5 cut(s) | 306, 615, 1031, 1248, 1344 |
| GluI | GCNGC | 3 cut(s) | 158, 1283, 1625 |
| GsaI | CCCAGC | 1 cut(s) | 1038 |
| HaeIII | GGCC | 1 cut(s) | 779 |
| HapII | CCGG | 2 cut(s) | 596, 731 |
| HindIII | AAGCTT | 1 cut(s) | 555 |
| HinfI | GANTC | 9 cut(s) | 24, 473, 479, 803, 912, 1100, 1421, 1480, 1616 |
| HpaII | CCGG | 2 cut(s) | 596, 731 |
| HphI | GGTGA | 3 cut(s) | 647, 1193, 1276 |
| Hpy166II | GTNNAC | 1 cut(s) | 1020 |
| Hpy8I | GTNNAC | 1 cut(s) | 1020 |
| Hpy99I | CGWCG | 1 cut(s) | 125 |
| HpyAV | CCTTC | 1 cut(s) | 518 |
| HpyCH4III | ACNGT | 4 cut(s) | 211, 259, 293, 643 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1012 |
| HpyF3I | CTNAG | 7 cut(s) | 355, 471, 477, 822, 929, 1076, 1425 |
| Kpn2I | TCCGGA | 1 cut(s) | 730 |
| Kzo9I | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| LguI | GCTCTTC | 3 cut(s) | 981, 996, 1146 |
| LmnI | GCTCC | 4 cut(s) | 445, 685, 1334, 1501 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 1294 |
| LweI | GCATC | 4 cut(s) | 226, 286, 972, 1668 |
| MaeI | CTAG | 5 cut(s) | 306, 615, 1031, 1248, 1344 |
| MaeIII | GTNAC | 2 cut(s) | 245, 1528 |
| MalI | GATC | 9 cut(s) | 107, 114, 609, 622, 628, 924, 1125, 1246, 1560 |
| MboI | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| MflI | RGATCY | 4 cut(s) | 620, 626, 922, 1244 |
| MhlI | GDGCHC | 1 cut(s) | 1516 |
| MluCI | AATT | 6 cut(s) | 200, 261, 586, 709, 1268, 1638 |
| MlyI | GAGTC | 5 cut(s) | 33, 482, 488, 812, 921 |
| MmeI | TCCRAC | 1 cut(s) | 1479 |
| Mph1103I | ATGCAT | 2 cut(s) | 1062, 1659 |
| MroI | TCCGGA | 1 cut(s) | 730 |
| MroXI | GAANNNNTTC | 2 cut(s) | 46, 1465 |
| MseI | TTAA | 5 cut(s) | 81, 518, 1116, 1524, 1720 |
| MslI | CAYNNNNRTG | 5 cut(s) | 759, 882, 957, 1179, 1656 |
| MspI | CCGG | 2 cut(s) | 596, 731 |
| MspR9I | CCNGG | 7 cut(s) | 33, 287, 383, 597, 849, 1278, 1621 |
| Mva1269I | GAATGC | 1 cut(s) | 1006 |
| MvaI | CCWGG | 6 cut(s) | 33, 287, 383, 849, 1278, 1621 |
| MvnI | CGCG | 1 cut(s) | 1015 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1012 |
| NciI | CCSGG | 1 cut(s) | 597 |
| NdeII | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| NlaIV | GGNNCC | 5 cut(s) | 175, 284, 320, 600, 681 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| NsiI | ATGCAT | 2 cut(s) | 1062, 1659 |
| NspI | RCATGY | 5 cut(s) | 578, 674, 902, 1304, 1657 |
| PaeI | GCATGC | 1 cut(s) | 674 |
| PaeR7I | CTCGAG | 1 cut(s) | 168 |
| PagI | TCATGA | 2 cut(s) | 538, 745 |
| PciI | ACATGT | 2 cut(s) | 574, 1300 |
| PciSI | GCTCTTC | 3 cut(s) | 981, 996, 1146 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 117, 150 |
| PctI | GAATGC | 1 cut(s) | 1006 |
| PdmI | GAANNNNTTC | 2 cut(s) | 46, 1465 |
| PfeI | GAWTC | 4 cut(s) | 1100, 1421, 1480, 1616 |
| PfoI | TCCNGGA | 1 cut(s) | 381 |
| PkrI | GCNGC | 3 cut(s) | 159, 1284, 1626 |
| PleI | GAGTC | 5 cut(s) | 32, 481, 487, 811, 920 |
| PpsI | GAGTC | 5 cut(s) | 32, 481, 487, 811, 920 |
| PpuMI | RGGWCCY | 1 cut(s) | 283 |
| PscI | ACATGT | 2 cut(s) | 574, 1300 |
| Psp5II | RGGWCCY | 1 cut(s) | 283 |
| Psp6I | CCWGG | 6 cut(s) | 31, 285, 381, 847, 1276, 1619 |
| PspFI | CCCAGC | 1 cut(s) | 1034 |
| PspGI | CCWGG | 6 cut(s) | 31, 285, 381, 847, 1276, 1619 |
| PspN4I | GGNNCC | 5 cut(s) | 175, 284, 320, 600, 681 |
| PspPI | GGNCC | 3 cut(s) | 283, 599, 1017 |
| PspPPI | RGGWCCY | 1 cut(s) | 283 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1424 |
| PsuI | RGATCY | 4 cut(s) | 620, 626, 922, 1244 |
| RsaI | GTAC | 2 cut(s) | 181, 208 |
| RsaNI | GTAC | 2 cut(s) | 180, 207 |
| RseI | CAYNNNNRTG | 5 cut(s) | 759, 882, 957, 1179, 1656 |
| SapI | GCTCTTC | 3 cut(s) | 981, 996, 1146 |
| SaqAI | TTAA | 5 cut(s) | 81, 518, 1116, 1524, 1720 |
| SatI | GCNGC | 3 cut(s) | 158, 1283, 1625 |
| Sau3AI | GATC | 9 cut(s) | 105, 112, 607, 620, 626, 922, 1123, 1244, 1558 |
| Sau96I | GGNCC | 3 cut(s) | 283, 599, 1017 |
| ScaI | AGTACT | 1 cut(s) | 208 |
| SchI | GAGTC | 5 cut(s) | 33, 482, 488, 812, 921 |
| ScrFI | CCNGG | 7 cut(s) | 33, 287, 383, 597, 849, 1278, 1621 |
| SduI | GDGCHC | 1 cut(s) | 1516 |
| SfaNI | GCATC | 4 cut(s) | 226, 286, 972, 1668 |
| SfcI | CTRYAG | 2 cut(s) | 63, 334 |
| Sfr274I | CTCGAG | 1 cut(s) | 168 |
| SinI | GGWCC | 3 cut(s) | 283, 599, 1017 |
| SlaI | CTCGAG | 1 cut(s) | 168 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 759, 882, 957, 1179, 1656 |
| SmlI | CTYRAG | 3 cut(s) | 168, 1515, 1571 |
| SmoI | CTYRAG | 3 cut(s) | 168, 1515, 1571 |
| SphI | GCATGC | 1 cut(s) | 674 |
| Sse9I | AATT | 6 cut(s) | 200, 261, 586, 709, 1268, 1638 |
| SsiI | CCGC | 4 cut(s) | 340, 483, 1015, 1624 |
| SspI | AATATT | 1 cut(s) | 1549 |
| SspMI | CTAG | 5 cut(s) | 306, 615, 1031, 1248, 1344 |
| StyD4I | CCNGG | 7 cut(s) | 31, 285, 381, 595, 847, 1276, 1619 |
| StyI | CCWWGG | 3 cut(s) | 402, 1109, 1330 |
| TaaI | ACNGT | 4 cut(s) | 211, 259, 293, 643 |
| TaqI | TCGA | 5 cut(s) | 111, 144, 153, 169, 1126 |
| TasI | AATT | 6 cut(s) | 200, 261, 586, 709, 1268, 1638 |
| TatI | WGTACW | 2 cut(s) | 179, 206 |
| TauI | GCSGC | 1 cut(s) | 1627 |
| TfiI | GAWTC | 4 cut(s) | 1100, 1421, 1480, 1616 |
| Tru1I | TTAA | 5 cut(s) | 81, 518, 1116, 1524, 1720 |
| Tru9I | TTAA | 5 cut(s) | 81, 518, 1116, 1524, 1720 |
| TscAI | CASTG | 3 cut(s) | 298, 537, 1561 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| TseI | GCWGC | 2 cut(s) | 157, 1282 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspGWI | ACGGA | 1 cut(s) | 1037 |
| TspRI | CASTG | 3 cut(s) | 298, 537, 1561 |
| VpaK11BI | GGWCC | 3 cut(s) | 283, 599, 1017 |
| XapI | RAATTY | 2 cut(s) | 200, 1638 |
| XceI | RCATGY | 5 cut(s) | 578, 674, 902, 1304, 1657 |
| XhoI | CTCGAG | 1 cut(s) | 168 |
| XmnI | GAANNNNTTC | 2 cut(s) | 46, 1465 |
| XspI | CTAG | 5 cut(s) | 306, 615, 1031, 1248, 1344 |
| ZrmI | AGTACT | 1 cut(s) | 208 |
| Zsp2I | ATGCAT | 2 cut(s) | 1062, 1659 |