Prupe.1G292900_v2.0.a1

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
29073271 .. 29077861
4591 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G292900.4

Sequence Viewer

Length: 2022 bp
ATGAGAAGGAGAGGACCATCAAGAGAATTTTCTGAACTCAGAAGTTGTTCTGGGAAGAAAACTGTGGAAAGTTGCAAGGTTAAAGGGGATGTTGATAAAGTTGTGTTCATCGATCTTGAGGATGAAGATGTCATCGATGTTGATTATCCCGAGTCTTTACAGCCACAGTCACGAGGTTCCAGTACATTGAGAAAAGATGGAAAATCTAAATTCCGTAGTTTCATCTATATAGATGATGACAATGATGATGATAATTACGTTACTCCTGTAATCTCTGTTGAAGAGGTTGGAGACCTGGATAGTGATGCCACCTCAAGCAAAAGTTCTTTTCCTGCTTCTAACTATAGGCAGAATTCTGTAACTTCAGATGGCGATGAATGTCAGGTTGTCCAGGAAAAGGATTCTGCATTAAAGCGGTCAAGTTGCAAGCAAACCCGCTCTGGTAAAGCTCCTGGCAGAAATCGTTATGGTTTGGGTTTTAAGTCTGAGAGTGATTCATCTGATAGTGATTATTCTGATTGCGAACTAATAGAAGGGTCTTATGGGAAGCTTCATGAACATTGGGAAAAGGCTTCTCAAAAGAGAAAACATGTTGTTCATAATGGTCAGTCTGGTTCAGCTGATCAAGCTAGTGGATCTGGATCTCATAGTGATACCCATGCTAATGTTGAAGTAGAGAATAGGACAGCACAGAGAGATGTCCCTGTTTGTTCAAGTTCAAAAAATGGAAATTATGAAAAGGAAAACCTTCCAGACTTTATGGGCCACGGGGAGGGTAGTTCTTTTGGTCCCCAAATGGATGGTTCTGTGGAATCAAATCAGAATGTCCCAAAAGAAGATCCTCTTATTTATGAGTGGCAGAGTTCCCAAAATGATAATGAAGAAGAACAAAGTCCTGAAGAGCCTCCCTTGTGGTCTAAGGAAGACCCAGGTGGTAAACAATCTGAACGTACAGGGACTTCTTTTATGGATAATGTGCAAAAGTTCAGGGATGAAACTAGTTTTTCTGATTCCTTGCCGGGTTCTGACAATGATAAAGGGAAACCTAGTGTTTTGAATGATGAAATTTTTTCCTGCAGAAACAAACATTTTGGTGAAATGCCTGATGACCATGACAGAGTTGAATTAAGGGGCAAGAAGAATAATACATTTCATGATGCTTCTTCCAGTTGCAATACTTCTTTGCCAAAGGAGTGCAGAAATGGAGCTACTTTTGAGGAAAAGGACAAAACAGTTTCTGGACAACCATCTGATGAAACACAGATGGATTGTGGTTTCACCCCTTCTGAAGACAAAATTGGTGTTGTCCATGAAAAATCTTGTTCCCAGGAGAATGTGATGGTAGACTTTGAGGAAGTGTCTTTGTGCAACACATCGTGTAATGGAGCAAGTAGTGATCGGGGGGGATTTGATTCAGAAAGAGGGAAAGAATCATGTGATTTAAGGGATATGTTACATGCTGAAGATGGTTATGCGAGTCCTGTCCAAAGAGACGCAGCCACTGTAGAAGGAGATATAATCACTGATCGAGAGAAGCTCAAGGAGACTGCTGAATACAAGCGAGCAATAGAAGAAGAAATGGCATCCAGGCAGCAAGTCTTACAAATTCAGGCAGAAGAGGCACAAAGATTACGCAAGAGGAGAAAGGCAGAAAACATGCGGTTATTAGACATGCAGAGAAGGCAAAAGCAACGCGTGGAAGAAGTAAGAGAGACGCAAAAGAAGGATGAAGAAAATTTAAATTTGAAAGACCAACTTCGTGCTGAAATAAGGAAGGAGCTTAAAAGATTGGAATTGACATGTATAGATATGGCTTCTTTGCTTCGTGGCTTAGGAATACAAGTGGGGGCTGGCTTCTGTCCTCTGCCACATGAGGTGCATGCAGCTTATAAACGGGCATTGCTGAAATTTCATCCAGACCGGGCATCAAGAACTGACGTACGCCAACAGGTTGAAGCTGAGGAAAAATTTAAGCTTATATCTCGCATGAAGGAAAAGCTTTTATTAACTTCATGTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

674

Amino Acids

75.65

Weight (kDa)

5.1

Isoelectric Point (pI)

54.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1890
AccBSI CCGCTC 1 cut(s) 438
AccI GTMKAC 1 cut(s) 1344
AccII CGCG 1 cut(s) 1695
AciI CCGC 3 cut(s) 415, 436, 1660
AclWI GGATC 3 cut(s) 643, 649, 833
AcsI RAATTY 9 cut(s) 26, 209, 352, 1065, 1605, 1735, 1741, 1907, 1967
AcuI CTGAAG 4 cut(s) 348, 918, 1308, 1482
AdeI CACNNNGTG 1 cut(s) 1377
AfaI GTAC 3 cut(s) 184, 952, 1941
AfiI CCNNNNNNNGG 2 cut(s) 397, 772
AflIII ACRYGT 3 cut(s) 589, 1693, 1799
AgsI TTSAA 8 cut(s) 281, 671, 714, 720, 1057, 1124, 1747, 1955
AhlI ACTAGT 1 cut(s) 998
AjnI CCWGG 6 cut(s) 294, 390, 451, 928, 1326, 1586
AjuI GAANNNNNNNTTGG 2 cut(s) 1281, 1313
Alw26I GTCTC 4 cut(s) 285, 1485, 1538, 1706
AlwI GGATC 3 cut(s) 643, 649, 833
AlwNI CAGNNNCTG 2 cut(s) 1238, 1502
Ama87I CYCGRG 1 cut(s) 149
AoxI GGCC 1 cut(s) 763
ApeKI GCWGC 3 cut(s) 1496, 1591, 1883
ApoI RAATTY 9 cut(s) 26, 209, 352, 1065, 1605, 1735, 1741, 1907, 1967
Asp700I GAANNNNTTC 2 cut(s) 46, 747
AspS9I GGNCC 3 cut(s) 14, 763, 788
AsuC2I CCSGG 2 cut(s) 1020, 1922
AsuHPI GGTGA 2 cut(s) 1106, 1270
AvaI CYCGRG 1 cut(s) 149
AvaII GGWCC 2 cut(s) 14, 788
BarI GAAGNNNNNNTAC 2 cut(s) 943, 975
BauI CACGAG 1 cut(s) 171
BbsI GAAGAC 2 cut(s) 930, 1296
BbvCI CCTCAGC 1 cut(s) 1959
BbvI GCAGC 3 cut(s) 1508, 1603, 1895
BccI CCATC 8 cut(s) 25, 191, 362, 794, 1255, 1258, 1333, 1460
BciT130I CCWGG 6 cut(s) 296, 392, 453, 930, 1328, 1588
BclI TGATCA 1 cut(s) 622
BcnI CCSGG 2 cut(s) 1020, 1922
BcoDI GTCTC 4 cut(s) 285, 1485, 1538, 1706
BcuI ACTAGT 1 cut(s) 998
BfaI CTAG 3 cut(s) 630, 999, 1047
BfmI CTRYAG 3 cut(s) 343, 1075, 1503
BisI GCNGC 3 cut(s) 1497, 1592, 1884
BlsI GCNGC 3 cut(s) 1498, 1593, 1885
Bme1390I CCNGG 8 cut(s) 296, 392, 453, 930, 1020, 1328, 1588, 1922
Bme18I GGWCC 2 cut(s) 14, 788
BmeT110I CYCGRG 1 cut(s) 149
BmgT120I GGNCC 3 cut(s) 14, 763, 788
BmiI GGNNCC 2 cut(s) 178, 790
BmrFI CCNGG 8 cut(s) 296, 392, 453, 930, 1020, 1328, 1588, 1922
BmsI GCATC 4 cut(s) 295, 1147, 1592, 1934
BpiI GAAGAC 2 cut(s) 930, 1296
BplI GAGNNNNNCTC 2 cut(s) 1521, 1553
Bpu10I CCTNAGC 2 cut(s) 1831, 1959
BpuEI CTTGAG 3 cut(s) 137, 298, 1523
BpuMI CCSGG 2 cut(s) 1020, 1922
Bsa29I ATCGAT 2 cut(s) 111, 135
BsaBI GATNNNNATC 1 cut(s) 640
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 766, 928, 1326
Bsc4I CCNNNNNNNGG 2 cut(s) 397, 772
Bse1I ACTGG 2 cut(s) 180, 1167
Bse3DI GCAATG 1 cut(s) 1898
Bse8I GATNNNNATC 1 cut(s) 640
BseBI CCWGG 6 cut(s) 296, 392, 453, 930, 1328, 1588
BseCI ATCGAT 2 cut(s) 111, 135
BseDI CCNNGG 3 cut(s) 766, 928, 1326
BseGI GGATG 7 cut(s) 94, 127, 805, 997, 1583, 1732, 1912
BseJI GATNNNNATC 1 cut(s) 640
BseLI CCNNNNNNNGG 2 cut(s) 397, 772
BseMI GCAATG 1 cut(s) 1898
BseMII CTCAG 3 cut(s) 52, 477, 1950
BseNI ACTGG 2 cut(s) 180, 1167
BseRI GAGGAG 1 cut(s) 1654
BseXI GCAGC 3 cut(s) 1508, 1603, 1895
BsgI GTGCAG 1 cut(s) 1216
Bsh1236I CGCG 1 cut(s) 1695
BshFI GGCC 1 cut(s) 765
BshVI ATCGAT 2 cut(s) 111, 135
BsiHKCI CYCGRG 1 cut(s) 149
BsiSI CCGG 2 cut(s) 1019, 1921
BsiWI CGTACG 1 cut(s) 1939
BslFI GGGAC 4 cut(s) 686, 774, 812, 970
BslI CCNNNNNNNGG 2 cut(s) 397, 772
BsmAI GTCTC 4 cut(s) 285, 1485, 1538, 1706
BsmBI CGTCTC 2 cut(s) 1485, 1706
BsmFI GGGAC 4 cut(s) 686, 774, 812, 970
BsnI GGCC 1 cut(s) 765
Bso31I GGTCTC 1 cut(s) 285
BsoBI CYCGRG 1 cut(s) 149
Bsp143I GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
BspACI CCGC 3 cut(s) 415, 436, 1660
BspANI GGCC 1 cut(s) 765
BspCNI CTCAG 3 cut(s) 51, 478, 1951
BspDI ATCGAT 2 cut(s) 111, 135
BspFNI CGCG 1 cut(s) 1695
BspHI TCATGA 2 cut(s) 553, 1153
BspLI GGNNCC 2 cut(s) 178, 790
BspMAI CTGCAG 1 cut(s) 1079
BspPI GGATC 3 cut(s) 643, 649, 833
BspQI GCTCTTC 1 cut(s) 894
BspTNI GGTCTC 1 cut(s) 285
BsrBI CCGCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 1898
BsrI ACTGG 2 cut(s) 180, 1167
BssECI CCNNGG 3 cut(s) 766, 928, 1326
BssMI GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
BssSI CACGAG 1 cut(s) 171
Bst2BI CACGAG 1 cut(s) 171
Bst2UI CCWGG 6 cut(s) 296, 392, 453, 930, 1328, 1588
Bst4CI ACNGT 4 cut(s) 64, 168, 1234, 1504
Bst6I CTCTTC 3 cut(s) 276, 894, 1611
BstC8I GCNNGC 4 cut(s) 428, 1563, 1852, 1881
BstDEI CTNAG 5 cut(s) 38, 486, 918, 1831, 1959
BstDSI CCRYGG 1 cut(s) 766
BstF5I GGATG 7 cut(s) 94, 127, 805, 997, 1583, 1732, 1912
BstFNI CGCG 1 cut(s) 1695
BstKTI GATC 7 cut(s) 115, 625, 638, 644, 841, 1399, 1528
BstMAI GTCTC 4 cut(s) 285, 1485, 1538, 1706
BstMBI GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
BstMWI GCNNNNNNNGC 3 cut(s) 626, 1619, 1681
BstNI CCWGG 6 cut(s) 296, 392, 453, 930, 1328, 1588
BstNSI RCATGY 6 cut(s) 593, 1460, 1660, 1675, 1803, 1883
BstSCI CCNGG 8 cut(s) 294, 390, 451, 928, 1018, 1326, 1586, 1920
BstSFI CTRYAG 3 cut(s) 343, 1075, 1503
BstUI CGCG 1 cut(s) 1695
BstV1I GCAGC 3 cut(s) 1508, 1603, 1895
BstV2I GAAGAC 2 cut(s) 930, 1296
BstX2I RGATCY 3 cut(s) 635, 641, 838
BstXI CCANNNNNNTGG 1 cut(s) 800
BstYI RGATCY 3 cut(s) 635, 641, 838
Bsu15I ATCGAT 2 cut(s) 111, 135
BsuRI GGCC 1 cut(s) 765
BsuTUI ATCGAT 2 cut(s) 111, 135
BtgI CCRYGG 1 cut(s) 766
BtgZI GCGATG 1 cut(s) 387
BtsCI GGATG 7 cut(s) 94, 127, 805, 997, 1583, 1732, 1912
BtsIMutI CAGTG 2 cut(s) 1500, 1521
Cac8I GCNNGC 4 cut(s) 428, 1563, 1852, 1881
CaiI CAGNNNCTG 2 cut(s) 1238, 1502
CciI TCATGA 2 cut(s) 553, 1153
Cfr13I GGNCC 3 cut(s) 14, 763, 788
ClaI ATCGAT 2 cut(s) 111, 135
CseI GACGC 2 cut(s) 1502, 1723
Csp6I GTAC 3 cut(s) 183, 951, 1940
CviQI GTAC 3 cut(s) 183, 951, 1940
DdeI CTNAG 5 cut(s) 38, 486, 918, 1831, 1959
DpnI GATC 7 cut(s) 114, 624, 637, 643, 840, 1398, 1527
DpnII GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
DraI TTTAAA 1 cut(s) 1740
DraIII CACNNNGTG 1 cut(s) 1377
Eam1104I CTCTTC 3 cut(s) 276, 894, 1611
EarI CTCTTC 3 cut(s) 276, 894, 1611
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 2 cut(s) 14, 788
Eco57I CTGAAG 4 cut(s) 348, 918, 1308, 1482
Eco88I CYCGRG 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 352
EcoRII CCWGG 6 cut(s) 294, 390, 451, 928, 1326, 1586
Esp3I CGTCTC 2 cut(s) 1485, 1706
FalI AAGNNNNNCTT 4 cut(s) 828, 860, 1740, 1772
FaqI GGGAC 4 cut(s) 686, 774, 812, 970
FauI CCCGC 1 cut(s) 443
FbaI TGATCA 1 cut(s) 622
FblI GTMKAC 1 cut(s) 1344
Fnu4HI GCNGC 3 cut(s) 1497, 1592, 1884
FokI GGATG 7 cut(s) 101, 134, 812, 1004, 1570, 1739, 1899
Fsp4HI GCNGC 3 cut(s) 1497, 1592, 1884
FspBI CTAG 3 cut(s) 630, 999, 1047
GluI GCNGC 3 cut(s) 1497, 1592, 1884
HaeIII GGCC 1 cut(s) 765
HapII CCGG 2 cut(s) 1019, 1921
HgaI GACGC 2 cut(s) 1502, 1723
HindIII AAGCTT 3 cut(s) 548, 1973, 1997
HinfI GANTC 8 cut(s) 152, 401, 494, 812, 1010, 1412, 1430, 1477
HpaII CCGG 2 cut(s) 1019, 1921
HphI GGTGA 2 cut(s) 1106, 1270
Hpy166II GTNNAC 2 cut(s) 938, 1345
Hpy8I GTNNAC 2 cut(s) 938, 1345
HpyAV CCTTC 8 cut(s) 527, 758, 1293, 1502, 1674, 1717, 1768, 1984
HpyCH4III ACNGT 4 cut(s) 64, 168, 1234, 1504
HpyCH4IV ACGT 3 cut(s) 258, 949, 1938
HpyF10VI GCNNNNNNNGC 3 cut(s) 626, 1619, 1681
HpyF3I CTNAG 5 cut(s) 38, 486, 918, 1831, 1959
HpySE526I ACGT 3 cut(s) 258, 949, 1938
Ksp22I TGATCA 1 cut(s) 622
Kzo9I GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
LguI GCTCTTC 1 cut(s) 894
LmnI GCTCC 4 cut(s) 454, 1205, 1385, 1777
Lsp1109I GCAGC 3 cut(s) 1508, 1603, 1895
LweI GCATC 4 cut(s) 295, 1147, 1592, 1934
MaeI CTAG 3 cut(s) 630, 999, 1047
MaeII ACGT 3 cut(s) 258, 949, 1938
MaeIII GTNAC 4 cut(s) 168, 259, 358, 1452
MalI GATC 7 cut(s) 114, 624, 637, 643, 840, 1398, 1527
MbiI CCGCTC 1 cut(s) 438
MboI GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
MflI RGATCY 3 cut(s) 635, 641, 838
MluI ACGCGT 1 cut(s) 1693
MlyI GAGTC 2 cut(s) 161, 1486
MmeI TCCRAC 1 cut(s) 268
MroXI GAANNNNTTC 2 cut(s) 46, 747
MseI TTAA 9 cut(s) 81, 410, 480, 1127, 1442, 1739, 1782, 1971, 2006
MslI CAYNNNNRTG 2 cut(s) 663, 1092
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 2 cut(s) 1019, 1921
MspR9I CCNGG 8 cut(s) 296, 392, 453, 930, 1020, 1328, 1588, 1922
MvaI CCWGG 6 cut(s) 296, 392, 453, 930, 1328, 1588
MvnI CGCG 1 cut(s) 1695
MwoI GCNNNNNNNGC 3 cut(s) 626, 1619, 1681
NciI CCSGG 2 cut(s) 1020, 1922
NdeII GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
NlaIV GGNNCC 2 cut(s) 178, 790
NmuCI GTSAC 1 cut(s) 168
NspI RCATGY 6 cut(s) 593, 1460, 1660, 1675, 1803, 1883
PaeI GCATGC 1 cut(s) 1883
PagI TCATGA 2 cut(s) 553, 1153
PciI ACATGT 2 cut(s) 589, 1799
PciSI GCTCTTC 1 cut(s) 894
PdmI GAANNNNTTC 2 cut(s) 46, 747
PfeI GAWTC 6 cut(s) 401, 494, 812, 1010, 1412, 1430
Pfl23II CGTACG 1 cut(s) 1939
PfoI TCCNGGA 1 cut(s) 390
PkrI GCNGC 3 cut(s) 1498, 1593, 1885
PleI GAGTC 2 cut(s) 160, 1485
PpsI GAGTC 2 cut(s) 160, 1485
PscI ACATGT 2 cut(s) 589, 1799
PsiI TTATAA 1 cut(s) 1890
Psp6I CCWGG 6 cut(s) 294, 390, 451, 928, 1326, 1586
PspGI CCWGG 6 cut(s) 294, 390, 451, 928, 1326, 1586
PspLI CGTACG 1 cut(s) 1939
PspN4I GGNNCC 2 cut(s) 178, 790
PspPI GGNCC 3 cut(s) 14, 763, 788
PstI CTGCAG 1 cut(s) 1079
PstNI CAGNNNCTG 2 cut(s) 1238, 1502
PsuI RGATCY 3 cut(s) 635, 641, 838
PvuII CAGCTG 1 cut(s) 620
RsaI GTAC 3 cut(s) 184, 952, 1941
RsaNI GTAC 3 cut(s) 183, 951, 1940
RseI CAYNNNNRTG 2 cut(s) 663, 1092
SapI GCTCTTC 1 cut(s) 894
SaqAI TTAA 9 cut(s) 81, 410, 480, 1127, 1442, 1739, 1782, 1971, 2006
SatI GCNGC 3 cut(s) 1497, 1592, 1884
Sau3AI GATC 7 cut(s) 112, 622, 635, 641, 838, 1396, 1525
Sau96I GGNCC 3 cut(s) 14, 763, 788
SchI GAGTC 2 cut(s) 161, 1486
ScrFI CCNGG 8 cut(s) 296, 392, 453, 930, 1020, 1328, 1588, 1922
SfaNI GCATC 4 cut(s) 295, 1147, 1592, 1934
SfcI CTRYAG 3 cut(s) 343, 1075, 1503
SinI GGWCC 2 cut(s) 14, 788
SmiI ATTTAAAT 1 cut(s) 1740
SmiMI CAYNNNNRTG 2 cut(s) 663, 1092
SmlI CTYRAG 3 cut(s) 116, 313, 1538
SmoI CTYRAG 3 cut(s) 116, 313, 1538
SpeI ACTAGT 1 cut(s) 998
SphI GCATGC 1 cut(s) 1883
SsiI CCGC 3 cut(s) 415, 436, 1660
SspMI CTAG 3 cut(s) 630, 999, 1047
StyD4I CCNGG 8 cut(s) 294, 390, 451, 928, 1018, 1326, 1586, 1920
SwaI ATTTAAAT 1 cut(s) 1740
TaaI ACNGT 4 cut(s) 64, 168, 1234, 1504
TaiI ACGT 3 cut(s) 261, 952, 1941
TaqI TCGA 3 cut(s) 111, 135, 1528
TatI WGTACW 1 cut(s) 182
TfiI GAWTC 6 cut(s) 401, 494, 812, 1010, 1412, 1430
Tru1I TTAA 9 cut(s) 81, 410, 480, 1127, 1442, 1739, 1782, 1971, 2006
Tru9I TTAA 9 cut(s) 81, 410, 480, 1127, 1442, 1739, 1782, 1971, 2006
TscAI CASTG 2 cut(s) 1507, 1528
TseFI GTSAC 1 cut(s) 168
TseI GCWGC 3 cut(s) 1496, 1591, 1883
Tsp45I GTSAC 1 cut(s) 168
TspGWI ACGGA 1 cut(s) 203
TspRI CASTG 2 cut(s) 1507, 1528
VpaK11BI GGWCC 2 cut(s) 14, 788
XapI RAATTY 9 cut(s) 26, 209, 352, 1065, 1605, 1735, 1741, 1907, 1967
XceI RCATGY 6 cut(s) 593, 1460, 1660, 1675, 1803, 1883
XmiI GTMKAC 1 cut(s) 1344
XmnI GAANNNNTTC 2 cut(s) 46, 747
XspI CTAG 3 cut(s) 630, 999, 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.