DnaJ molecular chaperone homology domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69060 |
| fragaria_vesca | FvH4_4g29350 FvH4_4g29350 FvH4_4g29350 |
| malus_domestica | MD13G1056900.v1.1 MD16G1056300.v1.1 |
| prunus_persica | Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 Prupe.1G292900_v2.0.a1 |
| pyrus_communis | pycom13g05080 pycom16g04930 |
| rosa_chinensis | RchiOBHm_Chr4g0437421 |
| rosa_laevigata | RLG00000006438 |
| rosa_multiflora | Rmu_co8026288.1_g000001 Rmu_co8466195.1_g000001 Rmu_sc0006744.1_g000002 Rmu_sc0008352.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00378660 |
| rosa_rugosa | Rorug04G0301400 Rorug04G0301500 |
| rosa_samantha | Rh4AG355500 Rh4BG365900 Rh4CG380000 Rh4DG359600 |
| rosa_wichuraiana | Rw4G031210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1848 |
| AccII | CGCG | 2 cut(s) | 1653, 1782 |
| AciI | CCGC | 5 cut(s) | 239, 340, 1549, 1782, 1900 |
| AclI | AACGTT | 1 cut(s) | 541 |
| AclWI | GGATC | 7 cut(s) | 612, 625, 631, 914, 1249, 1430, 1443 |
| AcsI | RAATTY | 9 cut(s) | 200, 343, 1003, 1229, 1264, 1563, 1693, 1712, 1865 |
| AcuI | CTGAAG | 5 cut(s) | 936, 1017, 1338, 1461, 1743 |
| AfaI | GTAC | 4 cut(s) | 181, 208, 351, 433 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 38, 170, 734, 1107, 1445, 1906 |
| AflIII | ACRYGT | 4 cut(s) | 571, 1297, 1392, 1651 |
| AgsI | TTSAA | 9 cut(s) | 272, 408, 690, 1144, 1208, 1466, 1699, 1864, 1913 |
| AjiI | CACGTC | 1 cut(s) | 1393 |
| AjnI | CCWGG | 8 cut(s) | 31, 285, 381, 844, 1133, 1194, 1544, 1970 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 909, 941 |
| AleI | CACNNNNGTG | 1 cut(s) | 1176 |
| Alw21I | GWGCWC | 1 cut(s) | 534 |
| Alw26I | GTCTC | 3 cut(s) | 181, 681, 1664 |
| AlwI | GGATC | 7 cut(s) | 612, 625, 631, 914, 1249, 1430, 1443 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 914 |
| Ama87I | CYCGRG | 1 cut(s) | 168 |
| AoxI | GGCC | 1 cut(s) | 774 |
| ApeKI | GCWGC | 2 cut(s) | 157, 1841 |
| ApoI | RAATTY | 9 cut(s) | 200, 343, 1003, 1229, 1264, 1563, 1693, 1712, 1865 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 46 |
| AspA2I | CCTAGG | 1 cut(s) | 1106 |
| AspLEI | GCGC | 1 cut(s) | 1620 |
| AspS9I | GGNCC | 3 cut(s) | 283, 596, 1014 |
| AsuHPI | GGTGA | 7 cut(s) | 257, 644, 740, 1190, 1273, 1815, 1862 |
| AvaI | CYCGRG | 1 cut(s) | 168 |
| AvaII | GGWCC | 3 cut(s) | 283, 596, 1014 |
| AvrII | CCTAGG | 1 cut(s) | 1106 |
| BamHI | GGATCC | 1 cut(s) | 1435 |
| BanII | GRGCYC | 1 cut(s) | 725 |
| BauI | CACGAG | 1 cut(s) | 741 |
| BbsI | GAAGAC | 1 cut(s) | 1761 |
| Bbv12I | GWGCWC | 1 cut(s) | 534 |
| BbvCI | CCTCAGC | 1 cut(s) | 1917 |
| BbvI | GCAGC | 2 cut(s) | 169, 1853 |
| BccI | CCATC | 5 cut(s) | 172, 406, 752, 1439, 1900 |
| BciT130I | CCWGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| BclI | TGATCA | 1 cut(s) | 745 |
| BcoDI | GTCTC | 3 cut(s) | 181, 681, 1664 |
| BfaI | CTAG | 4 cut(s) | 177, 1107, 1245, 1341 |
| BfmI | CTRYAG | 1 cut(s) | 63 |
| BglII | AGATCT | 1 cut(s) | 274 |
| BisI | GCNGC | 4 cut(s) | 158, 1550, 1783, 1842 |
| BlnI | CCTAGG | 1 cut(s) | 1106 |
| BlsI | GCNGC | 4 cut(s) | 159, 1551, 1784, 1843 |
| BmcAI | AGTACT | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| Bme18I | GGWCC | 3 cut(s) | 283, 596, 1014 |
| BmeT110I | CYCGRG | 1 cut(s) | 168 |
| BmgBI | CACGTC | 1 cut(s) | 1393 |
| BmgT120I | GGNCC | 3 cut(s) | 283, 596, 1014 |
| BmiI | GGNNCC | 4 cut(s) | 284, 484, 597, 1437 |
| BmrFI | CCNGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| BmsI | GCATC | 5 cut(s) | 226, 286, 634, 969, 1892 |
| BpiI | GAAGAC | 1 cut(s) | 1761 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 421, 453 |
| BpmI | CTGGAG | 1 cut(s) | 711 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1917 |
| BpuEI | CTTGAG | 1 cut(s) | 289 |
| BsaBI | GATNNNNATC | 2 cut(s) | 622, 990 |
| BsaJI | CCNNGG | 6 cut(s) | 700, 845, 1017, 1106, 1133, 1134 |
| BsaWI | WCCGGW | 1 cut(s) | 401 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 461, 491 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 38, 170, 734, 1107, 1445, 1906 |
| Bse3DI | GCAATG | 1 cut(s) | 1530 |
| Bse8I | GATNNNNATC | 2 cut(s) | 622, 990 |
| BseBI | CCWGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| BseDI | CCNNGG | 6 cut(s) | 700, 845, 1017, 1106, 1133, 1134 |
| BseGI | GGATG | 4 cut(s) | 398, 1084, 1690, 1896 |
| BseJI | GATNNNNATC | 2 cut(s) | 622, 990 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 38, 170, 734, 1107, 1445, 1906 |
| BseMI | GCAATG | 1 cut(s) | 1530 |
| BseMII | CTCAG | 6 cut(s) | 176, 369, 465, 1188, 1242, 1908 |
| BseXI | GCAGC | 2 cut(s) | 169, 1853 |
| BseYI | CCCAGC | 1 cut(s) | 1031 |
| Bsh1236I | CGCG | 2 cut(s) | 1653, 1782 |
| BshFI | GGCC | 1 cut(s) | 776 |
| BsiHKAI | GWGCWC | 1 cut(s) | 534 |
| BsiHKCI | CYCGRG | 1 cut(s) | 168 |
| BsiSI | CCGG | 1 cut(s) | 402 |
| BslFI | GGGAC | 3 cut(s) | 296, 896, 1426 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 38, 170, 734, 1107, 1445, 1906 |
| BsmAI | GTCTC | 3 cut(s) | 181, 681, 1664 |
| BsmFI | GGGAC | 3 cut(s) | 296, 896, 1426 |
| BsnI | GGCC | 1 cut(s) | 776 |
| BsoBI | CYCGRG | 1 cut(s) | 168 |
| Bsp1286I | GDGCHC | 2 cut(s) | 534, 725 |
| Bsp19I | CCATGG | 1 cut(s) | 700 |
| BspACI | CCGC | 5 cut(s) | 239, 340, 1549, 1782, 1900 |
| BspANI | GGCC | 1 cut(s) | 776 |
| BspCNI | CTCAG | 6 cut(s) | 177, 368, 466, 1187, 1243, 1909 |
| BspFNI | CGCG | 2 cut(s) | 1653, 1782 |
| BspLI | GGNNCC | 4 cut(s) | 284, 484, 597, 1437 |
| BspPI | GGATC | 7 cut(s) | 612, 625, 631, 914, 1249, 1430, 1443 |
| BspQI | GCTCTTC | 1 cut(s) | 1143 |
| BsrDI | GCAATG | 1 cut(s) | 1530 |
| BssECI | CCNNGG | 6 cut(s) | 700, 845, 1017, 1106, 1133, 1134 |
| BssSI | CACGAG | 1 cut(s) | 741 |
| BssT1I | CCWWGG | 2 cut(s) | 700, 1106 |
| Bst2BI | CACGAG | 1 cut(s) | 741 |
| Bst2UI | CCWGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| Bst4CI | ACNGT | 6 cut(s) | 293, 640, 827, 910, 1014, 1307 |
| Bst6I | CTCTTC | 3 cut(s) | 951, 1143, 1569 |
| BstC8I | GCNNGC | 6 cut(s) | 416, 669, 1521, 1616, 1756, 1839 |
| BstDEI | CTNAG | 6 cut(s) | 185, 355, 474, 1174, 1251, 1917 |
| BstDSI | CCRYGG | 2 cut(s) | 700, 1017 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1105 |
| BstF5I | GGATG | 4 cut(s) | 398, 1084, 1690, 1896 |
| BstFNI | CGCG | 2 cut(s) | 1653, 1782 |
| BstHHI | GCGC | 1 cut(s) | 1620 |
| BstMAI | GTCTC | 3 cut(s) | 181, 681, 1664 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1577, 1639 |
| BstNI | CCWGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| BstNSI | RCATGY | 8 cut(s) | 575, 671, 899, 1301, 1618, 1633, 1758, 1841 |
| BstSCI | CCNGG | 8 cut(s) | 31, 285, 381, 844, 1133, 1194, 1544, 1970 |
| BstSFI | CTRYAG | 1 cut(s) | 63 |
| BstUI | CGCG | 2 cut(s) | 1653, 1782 |
| BstV1I | GCAGC | 2 cut(s) | 169, 1853 |
| BstV2I | GAAGAC | 1 cut(s) | 1761 |
| BstX2I | RGATCY | 6 cut(s) | 274, 617, 623, 919, 1241, 1435 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 758 |
| BstYI | RGATCY | 6 cut(s) | 274, 617, 623, 919, 1241, 1435 |
| BsuRI | GGCC | 1 cut(s) | 776 |
| BtgI | CCRYGG | 2 cut(s) | 700, 1017 |
| BtrI | CACGTC | 1 cut(s) | 1393 |
| BtsCI | GGATG | 4 cut(s) | 398, 1084, 1690, 1896 |
| BtsIMutI | CAGTG | 4 cut(s) | 182, 298, 534, 1479 |
| Cac8I | GCNNGC | 6 cut(s) | 416, 669, 1521, 1616, 1756, 1839 |
| CaiI | CAGNNNCTG | 1 cut(s) | 914 |
| CfoI | GCGC | 1 cut(s) | 1620 |
| Cfr13I | GGNCC | 3 cut(s) | 283, 596, 1014 |
| CsiI | ACCWGGT | 1 cut(s) | 1970 |
| Csp6I | GTAC | 4 cut(s) | 180, 207, 350, 432 |
| CviQI | GTAC | 4 cut(s) | 180, 207, 350, 432 |
| DdeI | CTNAG | 6 cut(s) | 185, 355, 474, 1174, 1251, 1917 |
| Eam1104I | CTCTTC | 3 cut(s) | 951, 1143, 1569 |
| EarI | CTCTTC | 3 cut(s) | 951, 1143, 1569 |
| EciI | GGCGGA | 2 cut(s) | 355, 1889 |
| Eco130I | CCWWGG | 2 cut(s) | 700, 1106 |
| Eco24I | GRGCYC | 1 cut(s) | 725 |
| Eco47I | GGWCC | 3 cut(s) | 283, 596, 1014 |
| Eco57I | CTGAAG | 5 cut(s) | 936, 1017, 1338, 1461, 1743 |
| Eco88I | CYCGRG | 1 cut(s) | 168 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1105 |
| EcoO109I | RGGNCCY | 1 cut(s) | 283 |
| EcoRI | GAATTC | 2 cut(s) | 343, 1264 |
| EcoRII | CCWGG | 8 cut(s) | 31, 285, 381, 844, 1133, 1194, 1544, 1970 |
| EcoT14I | CCWWGG | 2 cut(s) | 700, 1106 |
| EcoT22I | ATGCAT | 1 cut(s) | 1059 |
| EcoT38I | GRGCYC | 1 cut(s) | 725 |
| ErhI | CCWWGG | 2 cut(s) | 700, 1106 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 909, 941, 1753, 1785 |
| FaqI | GGGAC | 3 cut(s) | 296, 896, 1426 |
| FauI | CCCGC | 1 cut(s) | 232 |
| FauNDI | CATATG | 1 cut(s) | 1053 |
| FbaI | TGATCA | 1 cut(s) | 745 |
| Fnu4HI | GCNGC | 4 cut(s) | 158, 1550, 1783, 1842 |
| FokI | GGATG | 4 cut(s) | 385, 1091, 1697, 1883 |
| FriOI | GRGCYC | 1 cut(s) | 725 |
| Fsp4HI | GCNGC | 4 cut(s) | 158, 1550, 1783, 1842 |
| FspBI | CTAG | 4 cut(s) | 177, 1107, 1245, 1341 |
| GlaI | GCGC | 1 cut(s) | 1619 |
| GluI | GCNGC | 4 cut(s) | 158, 1550, 1783, 1842 |
| GsaI | CCCAGC | 1 cut(s) | 1035 |
| GsuI | CTGGAG | 1 cut(s) | 711 |
| HaeIII | GGCC | 1 cut(s) | 776 |
| HapII | CCGG | 1 cut(s) | 402 |
| HhaI | GCGC | 1 cut(s) | 1620 |
| Hin6I | GCGC | 1 cut(s) | 1618 |
| HinP1I | GCGC | 1 cut(s) | 1618 |
| HindIII | AAGCTT | 3 cut(s) | 552, 868, 1931 |
| HpaII | CCGG | 1 cut(s) | 402 |
| HphI | GGTGA | 7 cut(s) | 257, 644, 740, 1190, 1273, 1815, 1862 |
| Hpy166II | GTNNAC | 3 cut(s) | 182, 1017, 1303 |
| Hpy8I | GTNNAC | 3 cut(s) | 182, 1017, 1303 |
| Hpy99I | CGWCG | 1 cut(s) | 125 |
| HpyAV | CCTTC | 6 cut(s) | 950, 1632, 1675, 1726, 1830, 1942 |
| HpyCH4III | ACNGT | 6 cut(s) | 293, 640, 827, 910, 1014, 1307 |
| HpyCH4IV | ACGT | 2 cut(s) | 541, 1392 |
| HpyCH4V | TGCA | 8 cut(s) | 20, 647, 671, 1057, 1633, 1758, 1837, 1841 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1577, 1639 |
| HpyF3I | CTNAG | 6 cut(s) | 185, 355, 474, 1174, 1251, 1917 |
| HpySE526I | ACGT | 2 cut(s) | 541, 1392 |
| HspAI | GCGC | 1 cut(s) | 1618 |
| Ksp22I | TGATCA | 1 cut(s) | 745 |
| LguI | GCTCTTC | 1 cut(s) | 1143 |
| LmnI | GCTCC | 2 cut(s) | 442, 537 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 1853 |
| LweI | GCATC | 5 cut(s) | 226, 286, 634, 969, 1892 |
| MabI | ACCWGGT | 1 cut(s) | 1970 |
| MaeI | CTAG | 4 cut(s) | 177, 1107, 1245, 1341 |
| MaeII | ACGT | 2 cut(s) | 541, 1392 |
| MaeIII | GTNAC | 5 cut(s) | 71, 245, 929, 1395, 1453 |
| MflI | RGATCY | 6 cut(s) | 274, 617, 623, 919, 1241, 1435 |
| MhlI | GDGCHC | 2 cut(s) | 534, 725 |
| MluI | ACGCGT | 1 cut(s) | 1651 |
| MlyI | GAGTC | 9 cut(s) | 30, 33, 479, 485, 683, 809, 1224, 1362, 1666 |
| MmeI | TCCRAC | 1 cut(s) | 1840 |
| Mph1103I | ATGCAT | 1 cut(s) | 1059 |
| MroXI | GAANNNNTTC | 1 cut(s) | 46 |
| MseI | TTAA | 4 cut(s) | 138, 1113, 1740, 1929 |
| MslI | CAYNNNNRTG | 3 cut(s) | 756, 879, 1176 |
| MspI | CCGG | 1 cut(s) | 402 |
| MspR9I | CCNGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| MvaI | CCWGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| MvnI | CGCG | 2 cut(s) | 1653, 1782 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1577, 1639 |
| NcoI | CCATGG | 1 cut(s) | 700 |
| NdeI | CATATG | 1 cut(s) | 1053 |
| NlaIV | GGNNCC | 4 cut(s) | 284, 484, 597, 1437 |
| NmuCI | GTSAC | 2 cut(s) | 245, 1395 |
| NsiI | ATGCAT | 1 cut(s) | 1059 |
| NspI | RCATGY | 8 cut(s) | 575, 671, 899, 1301, 1618, 1633, 1758, 1841 |
| OliI | CACNNNNGTG | 1 cut(s) | 1176 |
| PaeI | GCATGC | 4 cut(s) | 671, 1618, 1758, 1841 |
| PaeR7I | CTCGAG | 1 cut(s) | 168 |
| PasI | CCCWGGG | 1 cut(s) | 1134 |
| PciI | ACATGT | 2 cut(s) | 571, 1297 |
| PciSI | GCTCTTC | 1 cut(s) | 1143 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 126 |
| PdmI | GAANNNNTTC | 1 cut(s) | 46 |
| PfeI | GAWTC | 6 cut(s) | 524, 1097, 1165, 1418, 1427, 1541 |
| PflFI | GACNNNGTC | 1 cut(s) | 131 |
| PfoI | TCCNGGA | 2 cut(s) | 31, 381 |
| PkrI | GCNGC | 4 cut(s) | 159, 1551, 1784, 1843 |
| PleI | GAGTC | 9 cut(s) | 30, 32, 478, 484, 682, 808, 1223, 1361, 1666 |
| PpsI | GAGTC | 9 cut(s) | 30, 32, 478, 484, 682, 808, 1223, 1361, 1666 |
| PpuMI | RGGWCCY | 1 cut(s) | 283 |
| PscI | ACATGT | 2 cut(s) | 571, 1297 |
| PsiI | TTATAA | 1 cut(s) | 1848 |
| Psp1406I | AACGTT | 1 cut(s) | 541 |
| Psp5II | RGGWCCY | 1 cut(s) | 283 |
| Psp6I | CCWGG | 8 cut(s) | 31, 285, 381, 844, 1133, 1194, 1544, 1970 |
| PspFI | CCCAGC | 1 cut(s) | 1031 |
| PspGI | CCWGG | 8 cut(s) | 31, 285, 381, 844, 1133, 1194, 1544, 1970 |
| PspN4I | GGNNCC | 4 cut(s) | 284, 484, 597, 1437 |
| PspPI | GGNCC | 3 cut(s) | 283, 596, 1014 |
| PspPPI | RGGWCCY | 1 cut(s) | 283 |
| PstNI | CAGNNNCTG | 1 cut(s) | 914 |
| PsuI | RGATCY | 6 cut(s) | 274, 617, 623, 919, 1241, 1435 |
| PsyI | GACNNNGTC | 1 cut(s) | 131 |
| RsaI | GTAC | 4 cut(s) | 181, 208, 351, 433 |
| RsaNI | GTAC | 4 cut(s) | 180, 207, 350, 432 |
| RseI | CAYNNNNRTG | 3 cut(s) | 756, 879, 1176 |
| SapI | GCTCTTC | 1 cut(s) | 1143 |
| SaqAI | TTAA | 4 cut(s) | 138, 1113, 1740, 1929 |
| SatI | GCNGC | 4 cut(s) | 158, 1550, 1783, 1842 |
| Sau96I | GGNCC | 3 cut(s) | 283, 596, 1014 |
| ScaI | AGTACT | 1 cut(s) | 208 |
| SchI | GAGTC | 9 cut(s) | 30, 33, 479, 485, 683, 809, 1224, 1362, 1666 |
| ScrFI | CCNGG | 8 cut(s) | 33, 287, 383, 846, 1135, 1196, 1546, 1972 |
| SduI | GDGCHC | 2 cut(s) | 534, 725 |
| SexAI | ACCWGGT | 1 cut(s) | 1970 |
| SfaNI | GCATC | 5 cut(s) | 226, 286, 634, 969, 1892 |
| SfcI | CTRYAG | 1 cut(s) | 63 |
| Sfr274I | CTCGAG | 1 cut(s) | 168 |
| SinI | GGWCC | 3 cut(s) | 283, 596, 1014 |
| SlaI | CTCGAG | 1 cut(s) | 168 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 756, 879, 1176 |
| SmlI | CTYRAG | 2 cut(s) | 168, 304 |
| SmoI | CTYRAG | 2 cut(s) | 168, 304 |
| SphI | GCATGC | 4 cut(s) | 671, 1618, 1758, 1841 |
| SsiI | CCGC | 5 cut(s) | 239, 340, 1549, 1782, 1900 |
| SspI | AATATT | 1 cut(s) | 1474 |
| SspMI | CTAG | 4 cut(s) | 177, 1107, 1245, 1341 |
| StyD4I | CCNGG | 8 cut(s) | 31, 285, 381, 844, 1133, 1194, 1544, 1970 |
| StyI | CCWWGG | 2 cut(s) | 700, 1106 |
| TaaI | ACNGT | 6 cut(s) | 293, 640, 827, 910, 1014, 1307 |
| TaiI | ACGT | 2 cut(s) | 544, 1395 |
| TaqI | TCGA | 4 cut(s) | 169, 428, 1430, 1879 |
| TatI | WGTACW | 3 cut(s) | 179, 206, 431 |
| TauI | GCSGC | 2 cut(s) | 1552, 1785 |
| TfiI | GAWTC | 6 cut(s) | 524, 1097, 1165, 1418, 1427, 1541 |
| Tru1I | TTAA | 4 cut(s) | 138, 1113, 1740, 1929 |
| Tru9I | TTAA | 4 cut(s) | 138, 1113, 1740, 1929 |
| TscAI | CASTG | 4 cut(s) | 189, 298, 534, 1486 |
| TseFI | GTSAC | 2 cut(s) | 245, 1395 |
| TseI | GCWGC | 2 cut(s) | 157, 1841 |
| Tsp45I | GTSAC | 2 cut(s) | 245, 1395 |
| TspGWI | ACGGA | 1 cut(s) | 1034 |
| TspRI | CASTG | 4 cut(s) | 189, 298, 534, 1486 |
| Tth111I | GACNNNGTC | 1 cut(s) | 131 |
| VpaK11BI | GGWCC | 3 cut(s) | 283, 596, 1014 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1105 |
| XapI | RAATTY | 9 cut(s) | 200, 343, 1003, 1229, 1264, 1563, 1693, 1712, 1865 |
| XceI | RCATGY | 8 cut(s) | 575, 671, 899, 1301, 1618, 1633, 1758, 1841 |
| XhoI | CTCGAG | 1 cut(s) | 168 |
| XmaJI | CCTAGG | 1 cut(s) | 1106 |
| XmnI | GAANNNNTTC | 1 cut(s) | 46 |
| XspI | CTAG | 4 cut(s) | 177, 1107, 1245, 1341 |
| ZrmI | AGTACT | 1 cut(s) | 208 |
| Zsp2I | ATGCAT | 1 cut(s) | 1059 |