Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012038

Physical Location & Seq

Genomic Coordinates Reverse (-)

26456774 .. 26459570

Gene Structure 2797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G70260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1128 bp

ATGGAGGTGAAGGTTAGAAGAGATGAGTTGGTACCCTTTGTAGCAATGGCTATAATGGAAGCATGCACGATTGCTCTTACGATAATGGCGAAAACGGCGTTGACGGGAGGGATGAGTCCTTTTGTGTTCGTTGTTTACACAAACGCTTTTGGATCTATTCTTCTTCTTCCATTTTCTTTCTTATTTCACAGGAATGAGAGAACAGAACAATCTATCTTCTCTTGGCCACTCCTCGTTCGCGTTTTCTTTCTAGGTTTCACCGGGATATTTATGTTCCAAAACTTGGCATTTGTGGGACTACGCTTCAGCTCACCAATAGTAGTATGTGCAATGGGATTGCAAATCCCGTCCTTCTCCTTCCTGCTCTCTATTATTCTCGGAAGGAGCAAATTGGATTGGAGAAACACGAGTACGAGGGCTAAACTGATGGGAACAATAGTCTCGTTAAGCGGAGCTTTTGTTGAAGAGTTGTACAAAGGTCCATTCATAAGACCAGCTTCGTCTGCTTCCCCAAATCGTTTTCTTAAATCAGTCCCTAAACTTTTGGTCTACTACAACCTCCCCGACAATTGGTTTCTCGGCTGTATCTTTTTGGCCGTCGCTGTTTTTTCTGTCTCCCTGTTCAATGTTGTTCAGACAGGGACGGTAAAAAAGTATCCACATGTGATGAAAGTGGCTTCGTTTTACAGCATAGTCGGGACGATCCAATGTCTACTATTCTCGTTATTTATGGAAAGAGACCTTAGTGCATGGAAGATCCAACCTAACTTCGATCTTTATCTCATTATCGCCACGGGAACATTCGGAAGTGTAATACGAACAAGTGTACACGTAAAGTGCACCCAAATGAAAGGACCTTATTACGTGCCATTGTTCAAACCCTTTGGTATCTTTTGGGCAACACTCTTTGGTACCAGCTTCTTCGTCAACAGTCTTCACTACGGCAGTGTGTTAGGAGCAGCCATAGCTGGTGTGGGATATTTCACAGTGTCTTGGGGACAATTGAAGGAAAGCGAAGAAAAACAAAGTTCAAATGAAGAAAGAAAATCCATCAAAACTATTCATCATCGCGATGAAGATGAATACAAAGTTCCATTACTTATTAACCAGGAAGAAAGTCCTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032870 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080134 GO:0099568 GO:1900150 GO:1900424 GO:1900425 GO:1902288 GO:1902289

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

375

Amino Acids

42.17

Weight (kDa)

9.34

Isoelectric Point (pI)

38.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EamA	PF00892	17 - 152	4.4e-08	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60050 AT1G70260
fragaria_vesca	FvH4_4g34880
malus_domestica	MD16G1088700.v1.1
prunus_persica	Prupe.1G257800_v2.0.a1
pyrus_communis	pycom13g07630 pycom16g07590
rosa_chinensis	RchiOBHm_Chr4g0444311
rosa_laevigata	RLG00000005842
rosa_multiflora	Rmu_sc0002841.1_g000014
rosa_roxburghii	Rroxscaffold_5G00384860
rosa_rugosa	Rorug04G0351400 Rorug04G0351400 Rorug04G0351500
rosa_samantha	Rh4AG412100 Rh4BG423600 Rh4CG437800 Rh4DG418900
rosa_wichuraiana	Rw4G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	31, 911
AccB1I	GGYRCC	2 cut(s)	31, 911
AccB7I	CCANNNNNTGG	1 cut(s)	283
AccI	GTMKAC	2 cut(s)	549, 712
AccII	CGCG	2 cut(s)	240, 1071
AciI	CCGC	1 cut(s)	450
AclWI	GGATC	3 cut(s)	160, 697, 751
AcoI	YGGCCR	2 cut(s)	224, 594
AcuI	CTGAAG	1 cut(s)	289
AfaI	GTAC	5 cut(s)	33, 412, 473, 828, 913
AfiI	CCNNNNNNNGG	2 cut(s)	283, 570
AflIII	ACRYGT	2 cut(s)	661, 829
AgsI	TTSAA	5 cut(s)	464, 625, 877, 1006, 1032
AjnI	CCWGG	1 cut(s)	1107
AluBI	AGCT	5 cut(s)	309, 455, 497, 918, 968
AluI	AGCT	5 cut(s)	309, 455, 497, 918, 968
Alw21I	GWGCWC	1 cut(s)	842
Alw26I	GTCTC	3 cut(s)	445, 619, 732
Alw44I	GTGCAC	1 cut(s)	838
AlwI	GGATC	3 cut(s)	160, 697, 751
AoxI	GGCC	2 cut(s)	224, 594
ApaLI	GTGCAC	1 cut(s)	838
ApeKI	GCWGC	1 cut(s)	959
Asp718I	GGTACC	2 cut(s)	31, 911
AspS9I	GGNCC	2 cut(s)	479, 854
AsuC2I	CCSGG	1 cut(s)	262
AsuHPI	GGTGA	3 cut(s)	19, 250, 303
AvaII	GGWCC	2 cut(s)	479, 854
BaeGI	GKGCMC	1 cut(s)	842
BalI	TGGCCA	1 cut(s)	226
BanI	GGYRCC	2 cut(s)	31, 911
BauI	CACGAG	1 cut(s)	406
BbsI	GAAGAC	1 cut(s)	926
Bbv12I	GWGCWC	1 cut(s)	842
BbvI	GCAGC	1 cut(s)	971
BccI	CCATC	2 cut(s)	421, 1058
BceAI	ACGGC	3 cut(s)	111, 581, 958
BciT130I	CCWGG	1 cut(s)	1109
BciVI	GTATCC	1 cut(s)	666
BcnI	CCSGG	1 cut(s)	262
BcoDI	GTCTC	3 cut(s)	445, 619, 732
BfaI	CTAG	1 cut(s)	251
BfuI	GTATCC	1 cut(s)	666
BisI	GCNGC	1 cut(s)	960
BlsI	GCNGC	1 cut(s)	961
Bme1390I	CCNGG	2 cut(s)	262, 1109
Bme18I	GGWCC	2 cut(s)	479, 854
BmgT120I	GGNCC	2 cut(s)	479, 854
BmiI	GGNNCC	2 cut(s)	33, 913
BmrFI	CCNGG	2 cut(s)	262, 1109
BpiI	GAAGAC	1 cut(s)	926
BpuMI	CCSGG	1 cut(s)	262
BsaAI	YACGTR	2 cut(s)	832, 865
BsaBI	GATNNNNATC	1 cut(s)	777
BsaI	GGTCTC	1 cut(s)	732
BsaJI	CCNNGG	1 cut(s)	792
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	2 cut(s)	283, 570
Bse3DI	GCAATG	2 cut(s)	51, 336
Bse8I	GATNNNNATC	1 cut(s)	777
BseBI	CCWGG	1 cut(s)	1109
BseDI	CCNNGG	1 cut(s)	792
BseGI	GGATG	1 cut(s)	117
BseJI	GATNNNNATC	1 cut(s)	777
BseLI	CCNNNNNNNGG	2 cut(s)	283, 570
BseMI	GCAATG	2 cut(s)	51, 336
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	842
BseXI	GCAGC	1 cut(s)	971
Bsh1236I	CGCG	2 cut(s)	240, 1071
BshFI	GGCC	2 cut(s)	226, 596
BshNI	GGYRCC	2 cut(s)	31, 911
BsiHKAI	GWGCWC	1 cut(s)	842
BsiSI	CCGG	1 cut(s)	261
BslFI	GGGAC	5 cut(s)	309, 518, 655, 712, 1011
BslI	CCNNNNNNNGG	2 cut(s)	283, 570
BsmAI	GTCTC	3 cut(s)	445, 619, 732
BsmFI	GGGAC	5 cut(s)	309, 518, 655, 712, 1011
BsnI	GGCC	2 cut(s)	226, 596
Bso31I	GGTCTC	1 cut(s)	732
Bsp1286I	GDGCHC	1 cut(s)	842
Bsp1407I	TGTACA	2 cut(s)	471, 826
Bsp143I	GATC	4 cut(s)	152, 702, 756, 772
Bsp68I	TCGCGA	1 cut(s)	1071
BspACI	CCGC	1 cut(s)	450
BspANI	GGCC	2 cut(s)	226, 596
BspFNI	CGCG	2 cut(s)	240, 1071
BspLI	GGNNCC	2 cut(s)	33, 913
BspPI	GGATC	3 cut(s)	160, 697, 751
BspT107I	GGYRCC	2 cut(s)	31, 911
BspTNI	GGTCTC	1 cut(s)	732
BsrDI	GCAATG	2 cut(s)	51, 336
BsrGI	TGTACA	2 cut(s)	471, 826
BssECI	CCNNGG	1 cut(s)	792
BssMI	GATC	4 cut(s)	152, 702, 756, 772
BssSI	CACGAG	1 cut(s)	406
Bst2BI	CACGAG	1 cut(s)	406
Bst2UI	CCWGG	1 cut(s)	1109
Bst4CI	ACNGT	3 cut(s)	646, 932, 988
Bst6I	CTCTTC	2 cut(s)	13, 459
BstAUI	TGTACA	2 cut(s)	471, 826
BstBAI	YACGTR	2 cut(s)	832, 865
BstC8I	GCNNGC	1 cut(s)	64
BstDEI	CTNAG	1 cut(s)	743
BstDSI	CCRYGG	1 cut(s)	792
BstF5I	GGATG	1 cut(s)	117
BstFNI	CGCG	2 cut(s)	240, 1071
BstKTI	GATC	4 cut(s)	155, 705, 759, 775
BstMAI	GTCTC	3 cut(s)	445, 619, 732
BstMBI	GATC	4 cut(s)	152, 702, 756, 772
BstMWI	GCNNNNNNNGC	3 cut(s)	95, 503, 965
BstNI	CCWGG	1 cut(s)	1109
BstNSI	RCATGY	2 cut(s)	66, 665
BstSCI	CCNGG	2 cut(s)	260, 1107
BstSLI	GKGCMC	1 cut(s)	842
BstUI	CGCG	2 cut(s)	240, 1071
BstV1I	GCAGC	1 cut(s)	971
BstV2I	GAAGAC	1 cut(s)	926
BstX2I	RGATCY	2 cut(s)	152, 756
BstYI	RGATCY	2 cut(s)	152, 756
BsuI	GTATCC	1 cut(s)	666
BsuRI	GGCC	2 cut(s)	226, 596
BtgI	CCRYGG	1 cut(s)	792
BtgZI	GCGATG	2 cut(s)	1052, 1086
BtsCI	GGATG	1 cut(s)	117
BtsI	GCAGTG	1 cut(s)	952
BtsIMutI	CAGTG	2 cut(s)	952, 993
BtuMI	TCGCGA	1 cut(s)	1071
Cac8I	GCNNGC	1 cut(s)	64
Cfr13I	GGNCC	2 cut(s)	479, 854
Csp6I	GTAC	5 cut(s)	32, 411, 472, 827, 912
CviAII	CATG	3 cut(s)	63, 662, 750
CviQI	GTAC	5 cut(s)	32, 411, 472, 827, 912
DdeI	CTNAG	1 cut(s)	743
DpnI	GATC	4 cut(s)	154, 704, 758, 774
DpnII	GATC	4 cut(s)	152, 702, 756, 772
EaeI	YGGCCR	2 cut(s)	224, 594
Eam1104I	CTCTTC	2 cut(s)	13, 459
EarI	CTCTTC	2 cut(s)	13, 459
Eco31I	GGTCTC	1 cut(s)	732
Eco47I	GGWCC	2 cut(s)	479, 854
Eco57I	CTGAAG	1 cut(s)	289
EcoO109I	RGGNCCY	1 cut(s)	854
EcoRII	CCWGG	1 cut(s)	1107
FaeI	CATG	3 cut(s)	66, 665, 753
FalI	AAGNNNNNCTT	4 cut(s)	439, 471, 481, 513
FaqI	GGGAC	5 cut(s)	309, 518, 655, 712, 1011
FatI	CATG	3 cut(s)	62, 661, 749
FblI	GTMKAC	2 cut(s)	549, 712
Fnu4HI	GCNGC	1 cut(s)	960
FokI	GGATG	1 cut(s)	124
Fsp4HI	GCNGC	1 cut(s)	960
FspBI	CTAG	1 cut(s)	251
GluI	GCNGC	1 cut(s)	960
HaeIII	GGCC	2 cut(s)	226, 596
HapII	CCGG	1 cut(s)	261
Hin1II	CATG	3 cut(s)	66, 665, 753
HincII	GTYRAC	2 cut(s)	102, 928
HindII	GTYRAC	2 cut(s)	102, 928
HinfI	GANTC	1 cut(s)	115
HpaII	CCGG	1 cut(s)	261
HphI	GGTGA	3 cut(s)	19, 250, 303
Hpy166II	GTNNAC	8 cut(s)	102, 136, 550, 713, 827, 829, 840, 928
Hpy188I	TCNGA	3 cut(s)	380, 636, 806
Hpy188III	TCNNGA	2 cut(s)	697, 1070
Hpy8I	GTNNAC	8 cut(s)	102, 136, 550, 713, 827, 829, 840, 928
Hpy99I	CGWCG	1 cut(s)	602
HpyAV	CCTTC	5 cut(s)	4, 361, 367, 375, 1000
HpyCH4III	ACNGT	3 cut(s)	646, 932, 988
HpyCH4IV	ACGT	2 cut(s)	831, 864
HpyCH4V	TGCA	5 cut(s)	66, 329, 340, 749, 840
HpyF10VI	GCNNNNNNNGC	3 cut(s)	95, 503, 965
HpyF3I	CTNAG	1 cut(s)	743
HpySE526I	ACGT	2 cut(s)	831, 864
Hsp92II	CATG	3 cut(s)	66, 665, 753
KpnI	GGTACC	2 cut(s)	35, 915
Kzo9I	GATC	4 cut(s)	152, 702, 756, 772
LmnI	GCTCC	3 cut(s)	384, 452, 956
Lsp1109I	GCAGC	1 cut(s)	971
MaeI	CTAG	1 cut(s)	251
MaeII	ACGT	2 cut(s)	831, 864
MalI	GATC	4 cut(s)	154, 704, 758, 774
MboI	GATC	4 cut(s)	152, 702, 756, 772
MfeI	CAATTG	2 cut(s)	568, 1001
MflI	RGATCY	2 cut(s)	152, 756
MhlI	GDGCHC	1 cut(s)	842
MlsI	TGGCCA	1 cut(s)	226
MluCI	AATT	3 cut(s)	389, 568, 1001
MluNI	TGGCCA	1 cut(s)	226
MlyI	GAGTC	1 cut(s)	124
MmeI	TCCRAC	1 cut(s)	784
MnlI	CCTC	4 cut(s)	101, 242, 408, 569
Mox20I	TGGCCA	1 cut(s)	226
MscI	TGGCCA	1 cut(s)	226
MseI	TTAA	3 cut(s)	446, 525, 1104
MslI	CAYNNNNRTG	3 cut(s)	192, 845, 1071
Msp20I	TGGCCA	1 cut(s)	226
MspI	CCGG	1 cut(s)	261
MspR9I	CCNGG	2 cut(s)	262, 1109
MunI	CAATTG	2 cut(s)	568, 1001
MvaI	CCWGG	1 cut(s)	1109
MvnI	CGCG	2 cut(s)	240, 1071
MwoI	GCNNNNNNNGC	3 cut(s)	95, 503, 965
NciI	CCSGG	1 cut(s)	262
NdeII	GATC	4 cut(s)	152, 702, 756, 772
NlaIII	CATG	3 cut(s)	66, 665, 753
NlaIV	GGNNCC	2 cut(s)	33, 913
NmeAIII	GCCGAG	1 cut(s)	558
NruI	TCGCGA	1 cut(s)	1071
NspI	RCATGY	2 cut(s)	66, 665
PaeI	GCATGC	1 cut(s)	66
PciI	ACATGT	1 cut(s)	661
PcsI	WCGNNNNNNNCGW	1 cut(s)	86
PflMI	CCANNNNNTGG	1 cut(s)	283
PkrI	GCNGC	1 cut(s)	961
PleI	GAGTC	1 cut(s)	123
PpsI	GAGTC	1 cut(s)	123
Ppu21I	YACGTR	2 cut(s)	832, 865
PpuMI	RGGWCCY	1 cut(s)	854
PscI	ACATGT	1 cut(s)	661
Psp5II	RGGWCCY	1 cut(s)	854
Psp6I	CCWGG	1 cut(s)	1107
PspGI	CCWGG	1 cut(s)	1107
PspN4I	GGNNCC	2 cut(s)	33, 913
PspPI	GGNCC	2 cut(s)	479, 854
PspPPI	RGGWCCY	1 cut(s)	854
PsuI	RGATCY	2 cut(s)	152, 756
RruI	TCGCGA	1 cut(s)	1071
RsaI	GTAC	5 cut(s)	33, 412, 473, 828, 913
RsaNI	GTAC	5 cut(s)	32, 411, 472, 827, 912
RseI	CAYNNNNRTG	3 cut(s)	192, 845, 1071
SaqAI	TTAA	3 cut(s)	446, 525, 1104
SatI	GCNGC	1 cut(s)	960
Sau3AI	GATC	4 cut(s)	152, 702, 756, 772
Sau96I	GGNCC	2 cut(s)	479, 854
SchI	GAGTC	1 cut(s)	124
ScrFI	CCNGG	2 cut(s)	262, 1109
SduI	GDGCHC	1 cut(s)	842
SinI	GGWCC	2 cut(s)	479, 854
SmiMI	CAYNNNNRTG	3 cut(s)	192, 845, 1071
SphI	GCATGC	1 cut(s)	66
Sse9I	AATT	3 cut(s)	389, 568, 1001
SsiI	CCGC	1 cut(s)	450
SspMI	CTAG	1 cut(s)	251
StyD4I	CCNGG	2 cut(s)	260, 1107
TaaI	ACNGT	3 cut(s)	646, 932, 988
TaiI	ACGT	2 cut(s)	834, 867
TaqI	TCGA	1 cut(s)	771
TasI	AATT	3 cut(s)	389, 568, 1001
TatI	WGTACW	2 cut(s)	471, 826
Tru1I	TTAA	3 cut(s)	446, 525, 1104
Tru9I	TTAA	3 cut(s)	446, 525, 1104
TscAI	CASTG	2 cut(s)	952, 993
TseI	GCWGC	1 cut(s)	959
TspDTI	ATGAA	7 cut(s)	475, 683, 863, 1050, 1052, 1089, 1095
TspRI	CASTG	2 cut(s)	952, 993
Van91I	CCANNNNNTGG	1 cut(s)	283
VneI	GTGCAC	1 cut(s)	838
VpaK11BI	GGWCC	2 cut(s)	479, 854
XceI	RCATGY	2 cut(s)	66, 665
XcmI	CCANNNNNNNNNTGG	1 cut(s)	970
XmiI	GTMKAC	2 cut(s)	549, 712
XspI	CTAG	1 cut(s)	251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.