Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0012038

Physical Location & Seq

Genomic Coordinates Forward (+)

52344813 .. 52350621

Gene Structure 5809 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0351400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGCTAGCTCTTGGGAGTCCCACTATCAGCTTCAGAGCAAGCAGTGGCTGCAATCATTTGCTCAAAGAGCTTCAGCAAATATGGAATGACATTGGTGAGAGTGCGGCAGACCAAGACCGCATGTTGTTGGAGTTGGAAAGGGAATGCTTAGAAGTTTACAGGAGGAAGGTTGATGAAGCTGCCAATACCAAGGCACGCCTTCATCAGTCCGTTGCAGCAAAAGAAGCTGAGCTCGCCACTCTCATGGCTACTCTGGGGGAACTCAATATTGATTCACCGATACGGAGGGAAAAGAGATCAAGTTCTTTGAAAGAGAAACTCGCATCTGTTGCACCACTGCTAGACAATCTAAAAATAAAGAAAGAGGCACGAATGAAGCAATTTTCAGATATAAGGACACAAATTGAGAAGATCAGCGAGGAAATATCTGGTTATGATCATCTCAACAGTTCTTTGATCAGTTCATTAACCCTTGATGAACATGACTTGTCATCGAGGAAGCTAACTGAATATCAAGCACATCTGCACACCCTTCAAAAGGAGAAGTCTGACCGCCTTCAGAAGGTTTTGGAATATATCAATGAGGTTCATTCTCTTTGCGGTGTGCTTGGCTTGGATTTTGGTAAAACTGTAAGTGAAGTAGATCCTAGCTTGCAGAGGACAAACACAGAACAGTCCACGAACATCAGCAATAGCACATTGGAGGGTCTAGAGCAGACCATTTTCAAGTTGAAAACCGAAAGAAAAGCTCGAATCCAGAAGCTAAAAGATGTCGTAGCATCCCTCTATGAACTTTGGAATTTGATGGACTCTTCAAAAGAAGAAATGAATAAATTTTCAAGGATTACTTACATTCTTGGAAATGCAGAACCAGAAATTACACATCTTGGCTTACTTTCAACAGATGTTATTGAACAGGCATCGGCAGAAGTGGAGAGACTCACTGAATTGAAAGCAAGTAGAATGAAAGAGCTCGTTATGAAAAGGAGGTCTGAATTAGAGGAAATATGCAGAATGACTCACATTGAACCTGATACCAACACAGCTGCTGAGAAATCAAGTGCATTGATAGATTCTGGTCTAGTAGATCCGTCCGAACTTCTGGCAAACATAGAAGCACAGATACTCAAAGTTAAAGAAGAAGCTCTAAGTCGAAAAGAAATTACGGATAGGATAGACCGGTGGCTATTTGCTTGTGAAGAGGAAAATTGGCTCGAAGACTACAATCAAGATGATAGTCGGTACAGTGCTGGGAGAGGGGTTCACATTAACCTTAAACGTGCAGAACGTGCTCGAGTGACTGTAAACAAAATTCCAGCAATTGTTGACAATTTGATAAACAAAACACTGGCCTGGGAAAACGAGAGAAAGACATTATTTCTTTATGATGGGGTACGCTTGGTGTCAATACTAGAGGATTACAAGGTGAGCAGGCGGCAGAAGGAAGAGGAGAAGAAGCGATCTAGGGACCAAAAGAAGATCCAAGATCTTCTCCTCACAGAGAAAGAGGCCATGTATGGGTCTAGACCTAGTCCTAGAAAAAGTAATAGCTTCAGAAAACCAAATGGATATCGTGCAAATGGAAATGGATCCATGACTCCTACCCCTCGGCGGAACTCAGTTGGCAGCGGCACTCCGGAGCTCTTAACACCCCGATCTTACTCAGGGCGCCAAAATGGATATTTCAAGGAAATGAGACGATTGTCTACTGCACCACTGAACTTTGTGGCCATATCAAAAGAAGATACAATGTCATATGCTACATCTGTTTGTGGTTCAGTGTTAGGCTCCCCCCCTCGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032870 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080134 GO:0099568 GO:1900150 GO:1900424 GO:1900425 GO:1902288 GO:1902289

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

601

Amino Acids

68.3

Weight (kDa)

7.16

Isoelectric Point (pI)

52.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAP65_ASE1	PF03999	19 - 516	5e-83	Microtubule associated protein (MAP65/ASE1 family)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60050 AT1G70260
fragaria_vesca	FvH4_4g34880
malus_domestica	MD16G1088700.v1.1
prunus_persica	Prupe.1G257800_v2.0.a1
pyrus_communis	pycom13g07630 pycom16g07590
rosa_chinensis	RchiOBHm_Chr4g0444311
rosa_laevigata	RLG00000005842
rosa_multiflora	Rmu_sc0002841.1_g000014
rosa_roxburghii	Rroxscaffold_5G00384860
rosa_rugosa	Rorug04G0351400 Rorug04G0351400 Rorug04G0351500
rosa_samantha	Rh4AG412100 Rh4BG423600 Rh4CG437800 Rh4DG418900
rosa_wichuraiana	Rw4G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1668
AccI	GTMKAC	1 cut(s)	1706
AccIII	TCCGGA	1 cut(s)	1636
AciI	CCGC	7 cut(s)	104, 118, 553, 600, 1435, 1612, 1629
AclWI	GGATC	5 cut(s)	638, 1082, 1474, 1584, 1597
AcoI	YGGCCR	1 cut(s)	1728
AcsI	RAATTY	3 cut(s)	799, 833, 1311
AcuI	CTGAAG	4 cut(s)	16, 56, 542, 1537
AcyI	GRCGYC	1 cut(s)	1669
AfaI	GTAC	2 cut(s)	1244, 1395
AfiI	CCNNNNNNNGG	4 cut(s)	538, 562, 1518, 1611
AgeI	ACCGGT	1 cut(s)	1179
AjnI	CCWGG	1 cut(s)	1352
Alw21I	GWGCWC	4 cut(s)	234, 975, 1294, 1644
Alw26I	GTCTC	2 cut(s)	931, 1690
AlwI	GGATC	5 cut(s)	638, 1082, 1474, 1584, 1597
AlwNI	CAGNNNCTG	2 cut(s)	48, 1049
Ama87I	CYCGRG	1 cut(s)	1293
Aor13HI	TCCGGA	1 cut(s)	1636
AoxI	GGCC	3 cut(s)	1350, 1509, 1728
ApeKI	GCWGC	5 cut(s)	48, 179, 215, 1046, 1626
ApoI	RAATTY	3 cut(s)	799, 833, 1311
AsiGI	ACCGGT	1 cut(s)	1179
AspLEI	GCGC	1 cut(s)	1671
AspS9I	GGNCC	1 cut(s)	1468
AsuHPI	GGTGA	3 cut(s)	107, 267, 1438
AsuNHI	GCTAGC	1 cut(s)	4
AvaI	CYCGRG	1 cut(s)	1293
AvaII	GGWCC	1 cut(s)	1468
BalI	TGGCCA	1 cut(s)	1730
BamHI	GGATCC	1 cut(s)	1589
BanI	GGYRCC	1 cut(s)	1668
BanII	GRGCYC	3 cut(s)	234, 975, 1644
BarI	GAAGNNNNNNTAC	2 cut(s)	1107, 1139
BauI	CACGAG	1 cut(s)	1797
BbsI	GAAGAC	1 cut(s)	1224
Bbv12I	GWGCWC	4 cut(s)	234, 975, 1294, 1644
BbvI	GCAGC	5 cut(s)	35, 166, 227, 1033, 1638
BccI	CCATC	2 cut(s)	799, 1382
BciT130I	CCWGG	1 cut(s)	1354
BclI	TGATCA	2 cut(s)	436, 456
BcoDI	GTCTC	2 cut(s)	931, 1690
BfoI	RGCGCY	1 cut(s)	1672
BglII	AGATCT	1 cut(s)	1486
BisI	GCNGC	8 cut(s)	49, 105, 180, 216, 1047, 1436, 1627, 1630
BlpI	GCTNAGC	1 cut(s)	228
BlsI	GCNGC	8 cut(s)	50, 106, 181, 217, 1048, 1437, 1628, 1631
Bme1390I	CCNGG	1 cut(s)	1354
Bme18I	GGWCC	1 cut(s)	1468
BmeT110I	CYCGRG	1 cut(s)	1293
BmgT120I	GGNCC	1 cut(s)	1468
BmiI	GGNNCC	4 cut(s)	1469, 1591, 1670, 1789
BmrFI	CCNGG	1 cut(s)	1354
BmsI	GCATC	3 cut(s)	332, 788, 929
BmtI	GCTAGC	1 cut(s)	8
BoxI	GACNNNNGTC	1 cut(s)	1702
BpiI	GAAGAC	1 cut(s)	1224
Bpu1102I	GCTNAGC	1 cut(s)	228
BsaHI	GRCGYC	1 cut(s)	1669
BsaJI	CCNNGG	3 cut(s)	189, 1353, 1607
BsaWI	WCCGGW	2 cut(s)	1179, 1636
Bsc4I	CCNNNNNNNGG	4 cut(s)	538, 562, 1518, 1611
Bse118I	RCCGGY	1 cut(s)	1179
Bse1I	ACTGG	1 cut(s)	1353
BseAI	TCCGGA	1 cut(s)	1636
BseBI	CCWGG	1 cut(s)	1354
BseDI	CCNNGG	3 cut(s)	189, 1353, 1607
BseGI	GGATG	1 cut(s)	779
BseLI	CCNNNNNNNGG	4 cut(s)	538, 562, 1518, 1611
BseMII	CTCAG	4 cut(s)	219, 1041, 1632, 1677
BseNI	ACTGG	1 cut(s)	1353
BseRI	GAGGAG	2 cut(s)	1463, 1484
BseXI	GCAGC	5 cut(s)	35, 166, 227, 1033, 1638
BseYI	CCCAGC	1 cut(s)	1250
BsgI	GTGCAG	3 cut(s)	509, 1302, 1695
BshFI	GGCC	3 cut(s)	1352, 1511, 1730
BshNI	GGYRCC	1 cut(s)	1668
BshTI	ACCGGT	1 cut(s)	1179
BsiHKAI	GWGCWC	4 cut(s)	234, 975, 1294, 1644
BsiHKCI	CYCGRG	1 cut(s)	1293
BsiSI	CCGG	2 cut(s)	1180, 1637
BslFI	GGGAC	2 cut(s)	3, 1481
BslI	CCNNNNNNNGG	4 cut(s)	538, 562, 1518, 1611
BsmAI	GTCTC	2 cut(s)	931, 1690
BsmBI	CGTCTC	1 cut(s)	1690
BsmFI	GGGAC	2 cut(s)	3, 1481
BsmI	GAATGC	1 cut(s)	149
BsnI	GGCC	3 cut(s)	1352, 1511, 1730
BsoBI	CYCGRG	1 cut(s)	1293
Bsp1286I	GDGCHC	4 cut(s)	234, 975, 1294, 1644
Bsp13I	TCCGGA	1 cut(s)	1636
Bsp1720I	GCTNAGC	1 cut(s)	228
BspACI	CCGC	7 cut(s)	104, 118, 553, 600, 1435, 1612, 1629
BspANI	GGCC	3 cut(s)	1352, 1511, 1730
BspCNI	CTCAG	4 cut(s)	220, 1042, 1631, 1676
BspEI	TCCGGA	1 cut(s)	1636
BspLI	GGNNCC	4 cut(s)	1469, 1591, 1670, 1789
BspOI	GCTAGC	1 cut(s)	8
BspPI	GGATC	5 cut(s)	638, 1082, 1474, 1584, 1597
BspT107I	GGYRCC	1 cut(s)	1668
BsrFI	RCCGGY	1 cut(s)	1179
BsrI	ACTGG	1 cut(s)	1353
BssAI	RCCGGY	1 cut(s)	1179
BssECI	CCNNGG	3 cut(s)	189, 1353, 1607
BssNI	GRCGYC	1 cut(s)	1669
BssSI	CACGAG	1 cut(s)	1797
BssT1I	CCWWGG	1 cut(s)	189
Bst2BI	CACGAG	1 cut(s)	1797
Bst2UI	CCWGG	1 cut(s)	1354
Bst4CI	ACNGT	5 cut(s)	449, 631, 675, 1247, 1303
Bst6I	CTCTTC	3 cut(s)	817, 1194, 1440
BstACI	GRCGYC	1 cut(s)	1669
BstAPI	GCANNNNNTGC	3 cut(s)	48, 329, 1289
BstC8I	GCNNGC	6 cut(s)	6, 40, 196, 234, 653, 1433
BstDEI	CTNAG	6 cut(s)	148, 228, 1050, 1148, 1618, 1663
BstENI	CCTNNNNNAGG	2 cut(s)	536, 560
BstF5I	GGATG	1 cut(s)	779
BstH2I	RGCGCY	1 cut(s)	1672
BstHHI	GCGC	1 cut(s)	1671
BstMAI	GTCTC	2 cut(s)	931, 1690
BstMWI	GCNNNNNNNGC	6 cut(s)	48, 67, 224, 233, 329, 1289
BstNI	CCWGG	1 cut(s)	1354
BstNSI	RCATGY	1 cut(s)	124
BstPAI	GACNNNNGTC	1 cut(s)	1702
BstSCI	CCNGG	1 cut(s)	1352
BstV1I	GCAGC	5 cut(s)	35, 166, 227, 1033, 1638
BstV2I	GAAGAC	1 cut(s)	1224
BstX2I	RGATCY	5 cut(s)	643, 1087, 1479, 1486, 1589
BstXI	CCANNNNNNTGG	1 cut(s)	244
BstYI	RGATCY	5 cut(s)	643, 1087, 1479, 1486, 1589
BsuRI	GGCC	3 cut(s)	1352, 1511, 1730
BtsCI	GGATG	1 cut(s)	779
BtsI	GCAGTG	2 cut(s)	49, 335
BtsIMutI	CAGTG	7 cut(s)	49, 335, 942, 1252, 1346, 1715, 1785
Cac8I	GCNNGC	6 cut(s)	6, 40, 196, 234, 653, 1433
CaiI	CAGNNNCTG	2 cut(s)	48, 1049
CfoI	GCGC	1 cut(s)	1671
Cfr10I	RCCGGY	1 cut(s)	1179
Cfr13I	GGNCC	1 cut(s)	1468
Csp6I	GTAC	2 cut(s)	1243, 1394
CspAI	ACCGGT	1 cut(s)	1179
CviAII	CATG	5 cut(s)	121, 244, 482, 1513, 1594
CviQI	GTAC	2 cut(s)	1243, 1394
DdeI	CTNAG	6 cut(s)	148, 228, 1050, 1148, 1618, 1663
DinI	GGCGCC	1 cut(s)	1670
EaeI	YGGCCR	1 cut(s)	1728
Eam1104I	CTCTTC	3 cut(s)	817, 1194, 1440
EarI	CTCTTC	3 cut(s)	817, 1194, 1440
EciI	GGCGGA	1 cut(s)	1627
Ecl136II	GAGCTC	3 cut(s)	232, 973, 1642
Eco130I	CCWWGG	1 cut(s)	189
Eco24I	GRGCYC	3 cut(s)	234, 975, 1644
Eco32I	GATATC	1 cut(s)	1571
Eco47I	GGWCC	1 cut(s)	1468
Eco53kI	GAGCTC	3 cut(s)	232, 973, 1642
Eco57I	CTGAAG	4 cut(s)	16, 56, 542, 1537
Eco88I	CYCGRG	1 cut(s)	1293
EcoICRI	GAGCTC	3 cut(s)	232, 973, 1642
EcoNI	CCTNNNNNAGG	2 cut(s)	536, 560
EcoRII	CCWGG	1 cut(s)	1352
EcoRV	GATATC	1 cut(s)	1571
EcoT14I	CCWWGG	1 cut(s)	189
EcoT38I	GRGCYC	3 cut(s)	234, 975, 1644
EgeI	GGCGCC	1 cut(s)	1670
EheI	GGCGCC	1 cut(s)	1670
ErhI	CCWWGG	1 cut(s)	189
Esp3I	CGTCTC	1 cut(s)	1690
FaeI	CATG	5 cut(s)	124, 247, 485, 1516, 1597
FalI	AAGNNNNNCTT	2 cut(s)	832, 864
FaqI	GGGAC	2 cut(s)	3, 1481
FatI	CATG	5 cut(s)	120, 243, 481, 1512, 1593
FauNDI	CATATG	1 cut(s)	1756
FbaI	TGATCA	2 cut(s)	436, 456
FblI	GTMKAC	1 cut(s)	1706
Fnu4HI	GCNGC	8 cut(s)	49, 105, 180, 216, 1047, 1436, 1627, 1630
FokI	GGATG	1 cut(s)	766
FriOI	GRGCYC	3 cut(s)	234, 975, 1644
Fsp4HI	GCNGC	8 cut(s)	49, 105, 180, 216, 1047, 1436, 1627, 1630
GlaI	GCGC	1 cut(s)	1670
GluI	GCNGC	8 cut(s)	49, 105, 180, 216, 1047, 1436, 1627, 1630
GsaI	CCCAGC	1 cut(s)	1254
HaeII	RGCGCY	1 cut(s)	1672
HaeIII	GGCC	3 cut(s)	1352, 1511, 1730
HapII	CCGG	2 cut(s)	1180, 1637
HhaI	GCGC	1 cut(s)	1671
Hin1I	GRCGYC	1 cut(s)	1669
Hin1II	CATG	5 cut(s)	124, 247, 485, 1516, 1597
Hin6I	GCGC	1 cut(s)	1669
HinP1I	GCGC	1 cut(s)	1669
HincII	GTYRAC	1 cut(s)	1327
HindII	GTYRAC	1 cut(s)	1327
HinfI	GANTC	8 cut(s)	16, 272, 753, 809, 939, 1018, 1073, 1597
HpaII	CCGG	2 cut(s)	1180, 1637
HphI	GGTGA	3 cut(s)	107, 267, 1438
Hpy166II	GTNNAC	6 cut(s)	157, 678, 1264, 1306, 1327, 1707
Hpy188I	TCNGA	7 cut(s)	35, 388, 550, 561, 994, 1096, 1556
Hpy188III	TCNNGA	6 cut(s)	710, 757, 1229, 1524, 1637, 1799
Hpy8I	GTNNAC	6 cut(s)	157, 678, 1264, 1306, 1327, 1707
HpyAV	CCTTC	6 cut(s)	160, 209, 542, 556, 566, 1435
HpyCH4III	ACNGT	5 cut(s)	449, 631, 675, 1247, 1303
HpyCH4IV	ACGT	2 cut(s)	1279, 1288
HpyF10VI	GCNNNNNNNGC	6 cut(s)	48, 67, 224, 233, 329, 1289
HpyF3I	CTNAG	6 cut(s)	148, 228, 1050, 1148, 1618, 1663
HpySE526I	ACGT	2 cut(s)	1279, 1288
Hsp92I	GRCGYC	1 cut(s)	1669
Hsp92II	CATG	5 cut(s)	124, 247, 485, 1516, 1597
HspAI	GCGC	1 cut(s)	1669
KasI	GGCGCC	1 cut(s)	1668
Kpn2I	TCCGGA	1 cut(s)	1636
Ksp22I	TGATCA	2 cut(s)	436, 456
LmnI	GCTCC	2 cut(s)	1639, 1793
Lsp1109I	GCAGC	5 cut(s)	35, 166, 227, 1033, 1638
LweI	GCATC	3 cut(s)	332, 788, 929
MaeII	ACGT	2 cut(s)	1279, 1288
MaeIII	GTNAC	1 cut(s)	1297
MfeI	CAATTG	1 cut(s)	1320
MflI	RGATCY	5 cut(s)	643, 1087, 1479, 1486, 1589
MhlI	GDGCHC	4 cut(s)	234, 975, 1294, 1644
MlsI	TGGCCA	1 cut(s)	1730
MluNI	TGGCCA	1 cut(s)	1730
Mly113I	GGCGCC	1 cut(s)	1669
MlyI	GAGTC	5 cut(s)	25, 803, 933, 1012, 1591
MmeI	TCCRAC	2 cut(s)	108, 114
Mox20I	TGGCCA	1 cut(s)	1730
MroI	TCCGGA	1 cut(s)	1636
MscI	TGGCCA	1 cut(s)	1730
MseI	TTAA	6 cut(s)	467, 1134, 1269, 1275, 1646, 1804
MslI	CAYNNNNRTG	1 cut(s)	242
Msp20I	TGGCCA	1 cut(s)	1730
MspA1I	CMGCKG	2 cut(s)	1046, 1629
MspI	CCGG	2 cut(s)	1180, 1637
MspR9I	CCNGG	1 cut(s)	1354
MunI	CAATTG	1 cut(s)	1320
Mva1269I	GAATGC	1 cut(s)	149
MvaI	CCWGG	1 cut(s)	1354
MwoI	GCNNNNNNNGC	6 cut(s)	48, 67, 224, 233, 329, 1289
NarI	GGCGCC	1 cut(s)	1669
NdeI	CATATG	1 cut(s)	1756
NheI	GCTAGC	1 cut(s)	4
NlaIII	CATG	5 cut(s)	124, 247, 485, 1516, 1597
NlaIV	GGNNCC	4 cut(s)	1469, 1591, 1670, 1789
NmeAIII	GCCGAG	1 cut(s)	1588
NmuCI	GTSAC	1 cut(s)	1297
NspI	RCATGY	1 cut(s)	124
PaeR7I	CTCGAG	1 cut(s)	1293
PcsI	WCGNNNNNNNCGW	1 cut(s)	1285
PctI	GAATGC	1 cut(s)	149
PfeI	GAWTC	3 cut(s)	272, 753, 1073
PflFI	GACNNNGTC	1 cut(s)	1530
PinAI	ACCGGT	1 cut(s)	1179
PkrI	GCNGC	8 cut(s)	50, 106, 181, 217, 1048, 1437, 1628, 1631
PleI	GAGTC	5 cut(s)	24, 803, 933, 1012, 1591
PluTI	GGCGCC	1 cut(s)	1672
PpsI	GAGTC	5 cut(s)	24, 803, 933, 1012, 1591
PshAI	GACNNNNGTC	1 cut(s)	1702
Psp124BI	GAGCTC	3 cut(s)	234, 975, 1644
Psp6I	CCWGG	1 cut(s)	1352
PspFI	CCCAGC	1 cut(s)	1250
PspGI	CCWGG	1 cut(s)	1352
PspN4I	GGNNCC	4 cut(s)	1469, 1591, 1670, 1789
PspPI	GGNCC	1 cut(s)	1468
PspXI	VCTCGAGB	1 cut(s)	1293
PstNI	CAGNNNCTG	2 cut(s)	48, 1049
PsuI	RGATCY	5 cut(s)	643, 1087, 1479, 1486, 1589
PsyI	GACNNNGTC	1 cut(s)	1530
PvuII	CAGCTG	1 cut(s)	1046
RsaI	GTAC	2 cut(s)	1244, 1395
RsaNI	GTAC	2 cut(s)	1243, 1394
RseI	CAYNNNNRTG	1 cut(s)	242
SacI	GAGCTC	3 cut(s)	234, 975, 1644
SaqAI	TTAA	6 cut(s)	467, 1134, 1269, 1275, 1646, 1804
SatI	GCNGC	8 cut(s)	49, 105, 180, 216, 1047, 1436, 1627, 1630
Sau96I	GGNCC	1 cut(s)	1468
SchI	GAGTC	5 cut(s)	25, 803, 933, 1012, 1591
ScrFI	CCNGG	1 cut(s)	1354
SduI	GDGCHC	4 cut(s)	234, 975, 1294, 1644
SfaNI	GCATC	3 cut(s)	332, 788, 929
SfoI	GGCGCC	1 cut(s)	1670
Sfr274I	CTCGAG	1 cut(s)	1293
SinI	GGWCC	1 cut(s)	1468
SlaI	CTCGAG	1 cut(s)	1293
SmiMI	CAYNNNNRTG	1 cut(s)	242
SmlI	CTYRAG	1 cut(s)	1293
SmoI	CTYRAG	1 cut(s)	1293
SsiI	CCGC	7 cut(s)	104, 118, 553, 600, 1435, 1612, 1629
SspDI	GGCGCC	1 cut(s)	1668
SspI	AATATT	1 cut(s)	268
SstI	GAGCTC	3 cut(s)	234, 975, 1644
StyD4I	CCNGG	1 cut(s)	1352
StyI	CCWWGG	1 cut(s)	189
TaaI	ACNGT	5 cut(s)	449, 631, 675, 1247, 1303
TaiI	ACGT	2 cut(s)	1282, 1291
TaqI	TCGA	5 cut(s)	494, 751, 1153, 1215, 1294
TauI	GCSGC	3 cut(s)	107, 1438, 1632
TfiI	GAWTC	3 cut(s)	272, 753, 1073
Tru1I	TTAA	6 cut(s)	467, 1134, 1269, 1275, 1646, 1804
Tru9I	TTAA	6 cut(s)	467, 1134, 1269, 1275, 1646, 1804
TscAI	CASTG	7 cut(s)	49, 342, 949, 1252, 1353, 1722, 1785
TseFI	GTSAC	1 cut(s)	1297
TseI	GCWGC	5 cut(s)	48, 179, 215, 1046, 1626
Tsp45I	GTSAC	1 cut(s)	1297
TspGWI	ACGGA	4 cut(s)	199, 298, 1080, 1181
TspRI	CASTG	7 cut(s)	49, 342, 949, 1252, 1353, 1722, 1785
Tth111I	GACNNNGTC	1 cut(s)	1530
VpaK11BI	GGWCC	1 cut(s)	1468
XagI	CCTNNNNNAGG	2 cut(s)	536, 560
XapI	RAATTY	3 cut(s)	799, 833, 1311
XbaI	TCTAGA	2 cut(s)	709, 1523
XceI	RCATGY	1 cut(s)	124
XhoI	CTCGAG	1 cut(s)	1293
XmiI	GTMKAC	1 cut(s)	1706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.