Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006044

Physical Location & Seq

Genomic Coordinates Forward (+)

26782048 .. 26788973

Gene Structure 6926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G71010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4947 bp

ATGGGAATACCTGATGGTTCACTGCTAGATCTAATTGATAAGGTTAGGTCTTGGATAACTTCGGATTCAAGTGATTCTTTGTTCTTGTTGTCTTCATCTAAACAAGACTTTGGAATTATGCCTATCGTTTCCAAAATGTGTCATGACTGTGGAACAAAGGTGGAACAAGGATATTGTTGTCTTAGTTGTGGTTCTTGTTGGTGCAAGAGTTGTTCTGATACAGAAGAGAGCAAGATGAAGTTGTGTAGAGAATGTGATGCTGAGGTTCGTGAGTTAAGGGTTAAGAGCTATGATAAGGTTCATCCTCGGGATAGCCCTGATCCGCCTTCTTCTCTTGCTACCGAAAGCGAGAGTCTTGCCTCGAGTCTTGAAATCCGTGATTGTAGGAACATGGCTTCTATTCGTTGCTATCCTAGCAGGGGAGAGGAAGAAGAGGCTAGATATTGTGGTAAACAGTTGTTAAGCCCTTCGAGTGATAACTATCAGGACAGTTCAGATATAGAGTCGGGTAGTGTTAGTGCTAGACATGAGCTTTTTAGTTGTAAATCTTCTGCTGGGTCCAGTCCTCACGACAGTCCATTAAGGAACAATTTTAGTCCTCTTGGGCGCTTTGTACAGCACGCGAAAGACCTAAGAAGCCCTACTGTTTGTTCTTTTGATAATCATCAAGAACAACTCTTGGCTGATAATTTAGTTAAGCCAGGTCAGGGGGTATTGGAACAGGAAGATCACGAGGAGGAAGAGGATAAGTTGCAACAGCCGTTGGATTTTGAGAACAACGGCCGCATCTGGTATCCTCCACCACCGGAAGATGAGAATGATGATGCTGAGAGTAATTACTTTCATTATGATGACGAAGATGACGATATTGGGGACTCTGCTACCGAGTTTTCATTGAGTAGTAGCTTTTCTAGCCACATTCCTACCAAAGAGAAATTGGGAGAAAACAGCAATGAACCTCTTCGAACCGTGGTGCATGACCACTTCCGAGCTCTTGTTGCAGAGCTATTACGTGGGGAGGAGCTTAGTCCATCTGATGATGGCAGTGCCGGGGAGTGGCTGGATATTGTCACTGCTTTAGCGTGGCAAGCTGCAAATTTTGTAAAGCCGGATACTCGTGCAGGCGGCAGTATGGATCCCGGGAATTATGTAAAAATAAAATGTGTAGCATCTGGAAATCAAAATGAGAGCATTCTCATCAGGGGAATAGTGTGTAGCAAGAACATTACGCACAAGCGAATGATATCGCAGTACAAAAATCCAAGGGTGATGCTTTTAGCTGGTTCTCTTGAGTATCAGAGAGTTGCAGGCCAATTAGCATCCTTTAACACGTTGCTTCAACAGGAAAATGAACATATGAAGGCGATAATAGCAAAAATAGAGTCCCTTCGTCCTAATGTTCTGCTGGTAGAGAAAAGTGCATCTTCATATGCCCAGCAATACCTTCTAGAGAAGGAAATTTCATTGGTGCTCAATGTGAAAAGGTCATTGCTGGACCGTATAGCCCGTTGCACTGGTGCTGTTCTTTGCCCCTCACTAGATAGTATTAGTACTGCTCGATTGGGTCACTGTGAGCTGTTCCGGACTGAGAGAGTGTTGGAGCAACATGAAGCTGGCAATCAGTCAAACAGAAAACCATCAAGGACATTGATGTACTTTGAAGGGTGTCCTAGGCGCCTAGGTTGCACGGTTGTGCTTCGGGGAAGTTGTCGTGAGGAGCTAAAGAAGGTTAAACATGTTATTCAGTACGCTGTATTTGCAGCTTATCACTTATCGTTGGAGACTTCATTCCTTGCGGATGAAGGTGCTTCTCTGCCTAAAATTAGACTGAAGCAACCAGGGATGGTGCGGACTGCATCACAAAGGAGGATAATTGATGAAGGCATTTCCTTAATAACTCAATCTCCTACAGAAACAGATAGTCAAGCTTTGCTTGAAACAGCTGCACATGAAGATGAACATACGGCTCCTATGCCTGAGCATGAAGTTTGTGAATCATTGTGTGAGGATTTTGATCCTACTCAGATATTCCCACCGTCTTCTGAAGTTGAGACTGAACAATCTGATACCCTGAATGGAGATTTTGCCAATAATTTGGTAACAAGATCATATTCTTCGAATCAGTTAAATGATTTGCATGAACCCACTTTGTGCTTAAGTAGTGAAATTCCTGAAACGCCGACTCAACAGCCGAGTGGTGAAGAAGATAACGGCAGAGGTGAAGAAGAGAACCAATTAGTGAACCCCCAAGATTTGCCACAACATGAGAGCTTCTATGAAGATGATGTCTCTAGTGAGTATTTCTCTGCTGCGGACTCTCATCAGAGCATATTGGTCTCATTTTCAAGCCGTTGTGTTTTGAAAGAATCAGTATGTGAACGTTCACGACTCTTGCGGATTAAGTTCTATGGATCCTTTGATAAACCTCTCGGAAGATATTTGAAAGATGATCTTTTCGATAAGACTTCTAGTTGTAGATCCTGTAAGGAGCTGGTTGATGCGCATGTACTCTGCTATTCTCATCAGAATGGAAACCTTACTATCAATGTTAGACGTCTCCCTTCCATGAAGCTTCCTGGTGAACAAGATGGGAAGATATGGATGTGGCATCGTTGCTTAAGATGTGCACATGTAGATGGAGTCCCACCTGCTACTCGTAGAGTAGTTATGTCTGATGCAGCATGGGGATTGTCTTTTGGAAAGTTTCTGGAACTTAGCTTTTCGAATCATGCAACTGCGAATCGTGTTGCATCTTGCGGTCATTCGCTTCAAAGAGACTGCCTTCGATTCTATGGATTTGGTAACATGGTGGCATTCTTTAGATATTCTCCCATCAATATACTTACTGTACTCCTCCCACCGTCGATGCTTGAGTTCAATAGCCATCCTCAACAGGAGTGGATACGAACAGAGGCAGCTGAGCTTGTTGGTAAAATGAGGACTATGTATACGGAGATATCTGATATGCTCAACCGCATGGAAGAAAAAAGCAGTTTGCTTGAACCTGAACAATCTGAAGCATGTGATCTACATAGTCGCATCATCGGATTAATAGATCAACTTGTGAAAGAAAAAGATGAATACGATGATGCACTGCAACCTATTTTTGAGGAGAATCTGCAAATTCAGGGAAGTTTGGATATCCTAGAGCTGAATCGATTGAGACGAGCACTCATGATTGGTGCTCATGCTTGGGATCATCAGCTTTACTTGTTAAACTCTCAACTCAAGAAAGCATCAGTCTTTAAAACTGGTGATGACAATGCTCCTCGGAATCCAGAGATGCATGATCCTCCAAAGATTGACCGTAGAATGCAGGAAGGTTCAGATGAGAGGGATGAACAATCCCATACTGATTCAGAAGCTAATGGTGATAACAAAGATCCGGAAAACATTCCCTCCCCTGGCACTTCTCTATCTGAGAGGATAGATTCGGCGTGGTTGGGCTCGTTTCAAAATCTAGAGAAAGCCGAGACTATTGCTGAGACGGAAGGCTTTTCAGCTGTTAATTCTTCTCTCCGGAGGCTTGCCAGGCCAATTCGAGTCCAGTCTTTTGATTCAGCGATACGGTTTCAAGAACGTATCCAAAAAGGTTTGCCACCATCTTCTTTGTATCTCTCGACCCTCAGATCTTTCCACGCTTCTGGCGAGTATAGGAATATGGTGAGGGACCCTGTTTCAAATGTGATGAGGACTTACTCACAGATGTTGCCACTGGAAGTACAGAAATTGGATCTGATTGTTGGTTCAGCGCCAACATACATCTCTTCTGCATCTCAAATGGCTGATGGGGCACGGATGTTGATTCCTCAACGGGGCCTTAACGATATCGTGGTTCCTGTATACGATGATGATCCAGCTAGTGTTGTATCATATGCTATCAATTCAAAGGAATATAAGGAGTGGATCGTTAACAAAGGTCTTGCTTCTAGTAGTAGTAGCAGCAATTTGAATAACAGAGAGTCTGAACCTTCCGCCTTCTCGACTTGGCGTTCTCTGTCGATGGATGTTGATTACATTCAACACGCGGTGTATGGATCTTCTCAAGACGATAGAAAGTCTCCGCATTTGACCATTTCTTTCAGCGACCGCGCTTCTTCTTCCTCTACTGCCACTGAAGGTAAAGTGAAGTTCTCTGTGACGTGTTATTTTGCAACGCAGTTTGACACTCTGAGAAAGACTTGCTGTCCGAGTGAAGTGGACTTTGTGAGATCCTTGAGCCGTTGTCAGAGATGGTCTGCACAGGGAGGGAAAAGCAATGTTTACTTTGCCAAGTCATTGGACGAGAGGTTCATCATAAAACAAGTCGTCAAAACCGAGCTGGATTCTTTCGAGGATTTTGCACCTGAGTACTTCAAATATTTGAAGGAATCACTCAGTTCCGGGAGCCCTACTTGTCTTGCTAAGATTCTCGGTATCTACCAGGTCTCAATTAAACATCCGAAAGGTGGAAAAGAGACAAAGATGGATTTGATGGTGATGGAGAATCTCTTCTACAACAGAAGAATATCTAGGATCTATGATCTCAAGGGATCTGCACGGTCAAGGTACAATCCAAACACATCCGGAGCAGACAAAGTTTTGTTAGACATGAATCTGCTAGAGACACTGCGCACAGAACCGATATTCCTAGGAAGCAAGGCCAAGAGAAGCTTGGAAAGAGCGATATGGAACGACACCAATTTCTTGGCTTCTGTGGATGTAATGGACTACTCATTGCTGGTTGGATTCGACGAAGAGCGGAAAGAACTAGTTCTCGGGATCATCGACTTCATGAGACAGTACACATGGGACAAGCACCTAGAGACTTGGGTTAAAGCTTCAGGCATTTTGGGTGGACCCAAGAATGCTTCTCCAACTATAGTCTCACCAAAACAGTACAAGAGGAGGTTTAGAAAGGCCATGACCACTTATTTTCTCACTGTTCCTGAGCCATGGACCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000285 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005942 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0008150 GO:0008152 GO:0008289 GO:0009987 GO:0010008 GO:0010118 GO:0012505 GO:0016020 GO:0016192 GO:0016197 GO:0016301 GO:0016307 GO:0016310 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0019898 GO:0030258 GO:0031090 GO:0031410 GO:0031982 GO:0032266 GO:0032991 GO:0035032 GO:0035091 GO:0042147 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061695 GO:0070772 GO:0071704 GO:0090332 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:1901981 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00562 ko04070 ko04145 ko04810 map00562 map04070 map04145 map04810

Pfam Domains

Protein Families

Cpn60_TCP1 PIP5K

Protein Analysis

1648

Amino Acids

185.49

Weight (kDa)

5.35

Isoelectric Point (pI)

53.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	352 - 596	1.4e-32	TCP-1/cpn60 chaperonin family
PIP5K	PF01504	1415 - 1581	2.2e-34	Phosphatidylinositol-4-phosphate 5-Kinase
PIP5K	PF01504	1581 - 1637	1.5e-07	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71010
fragaria_vesca	FvH4_4g32320 FvH4_4g32320 FvH4_4g32320 FvH4_4g32320 FvH4_4g32320
malus_domestica	MD13G1026200.v1.1 MD16G1029100.v1.1
prunus_persica	Prupe.1G323700_v2.0.a1 Prupe.1G323700_v2.0.a1
pyrus_communis	pycom13g02450 pycom13g02470 pycom16g02480 pycom16g02500
rosa_chinensis	RchiOBHm_Chr4g0441111
rosa_laevigata	RLG00000006113
rosa_multiflora	Rmu_sc0006317.1_g000017 Rmu_sc0027558.1_g000002
rosa_roxburghii	Rroxscaffold_5G00382080
rosa_rugosa	Rorug04G0331100 Rorug04G0331200
rosa_samantha	Rh4AG382800 Rh4BG396600 Rh4CG411700 Rh4DG389400 Rh6CG153000
rosa_wichuraiana	Rw4G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2656
AatII	GACGTC	1 cut(s)	2557
Acc16I	TGCGCA	2 cut(s)	2502, 4613
Acc36I	ACCTGC	1 cut(s)	2656
AccB1I	GGYRCC	1 cut(s)	1674
AccBSI	CCGCTC	1 cut(s)	4741
AccI	GTMKAC	2 cut(s)	2948, 3843
AccII	CGCG	3 cut(s)	623, 4028, 4092
AccIII	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
AclI	AACGTT	1 cut(s)	2380
AcoI	YGGCCR	1 cut(s)	781
AcsI	RAATTY	4 cut(s)	1096, 1458, 2166, 3123
AcuI	CTGAAG	5 cut(s)	1850, 2064, 3036, 4137, 4806
AcyI	GRCGYC	2 cut(s)	1675, 2554
AdeI	CACNNNGTG	2 cut(s)	2151, 4030
AfiI	CCNNNNNNNGG	6 cut(s)	419, 707, 1056, 3404, 3815, 4448
AflII	CTTAAG	2 cut(s)	2155, 2617
AflIII	ACRYGT	4 cut(s)	1329, 1735, 2629, 4142
AhdI	GACNNNNNGTC	1 cut(s)	4185
AhlI	ACTAGT	1 cut(s)	4750
AjiI	CACGTC	1 cut(s)	4143
AjnI	CCWGG	6 cut(s)	700, 1837, 2575, 3403, 3530, 4422
AleI	CACNNNNGTG	1 cut(s)	1691
AloI	GAACNNNNNNTCC	4 cut(s)	4274, 4306, 4611, 4643
Alw21I	GWGCWC	5 cut(s)	994, 1473, 2629, 3172, 3187
Alw44I	GTGCAC	1 cut(s)	2625
Ama87I	CYCGRG	4 cut(s)	306, 361, 1139, 4757
Aor13HI	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
AoxI	GGCC	6 cut(s)	781, 1309, 3533, 3817, 4641, 4899
ApaLI	GTGCAC	1 cut(s)	2625
ApeKI	GCWGC	7 cut(s)	1091, 1760, 1943, 2309, 2678, 2915, 3942
ApoI	RAATTY	4 cut(s)	1096, 1458, 2166, 3123
ArsI	GACNNNNNNTTYG	2 cut(s)	1367, 1399
AseI	ATTAAT	1 cut(s)	3050
Asp700I	GAANNNNTTC	4 cut(s)	960, 3393, 4490, 4752
AspA2I	CCTAGG	3 cut(s)	1670, 1678, 4630
AspLEI	GCGC	6 cut(s)	609, 1677, 2503, 3754, 4094, 4614
AspS9I	GGNCC	6 cut(s)	558, 1495, 3670, 3817, 4838, 4938
AsuC2I	CCSGG	4 cut(s)	1051, 1140, 1141, 4384
AsuHPI	GGTGA	9 cut(s)	1279, 2210, 2231, 2591, 3266, 3383, 3676, 4489, 4860
AsuII	TTCGAA	3 cut(s)	964, 2117, 2723
AvaI	CYCGRG	4 cut(s)	306, 361, 1139, 4757
AvaII	GGWCC	5 cut(s)	558, 1495, 3670, 4838, 4938
AvrII	CCTAGG	3 cut(s)	1670, 1678, 4630
BaeGI	GKGCMC	2 cut(s)	2629, 3796
BamHI	GGATCC	2 cut(s)	1135, 2411
BanI	GGYRCC	1 cut(s)	1674
BanII	GRGCYC	3 cut(s)	994, 3449, 4391
BauI	CACGAG	2 cut(s)	731, 1116
BbsI	GAAGAC	2 cut(s)	84, 2031
Bbv12I	GWGCWC	5 cut(s)	994, 1473, 2629, 3172, 3187
BbvCI	CCTCAGC	1 cut(s)	261
BbvI	GCAGC	7 cut(s)	1078, 1772, 1930, 2296, 2690, 2927, 3954
BceAI	ACGGC	6 cut(s)	745, 796, 1980, 2227, 2334, 4206
BcgI	CGANNNNNNTGC	6 cut(s)	338, 372, 3461, 3495, 4322, 4356
BciT130I	CCWGG	6 cut(s)	702, 1839, 2577, 3405, 3532, 4424
BciVI	GTATCC	4 cut(s)	804, 1105, 2895, 3593
BcnI	CCSGG	4 cut(s)	1051, 1140, 1141, 4384
BcuI	ACTAGT	1 cut(s)	4750
BfmI	CTRYAG	2 cut(s)	1908, 4860
BfoI	RGCGCY	3 cut(s)	610, 1678, 3755
BfrI	CTTAAG	2 cut(s)	2155, 2617
BfuAI	ACCTGC	1 cut(s)	2656
BfuI	GTATCC	4 cut(s)	804, 1105, 2895, 3593
BglII	AGATCT	2 cut(s)	28, 3629
BisI	GCNGC	9 cut(s)	784, 1092, 1126, 1761, 1944, 2310, 2679, 2916, 3943
BlnI	CCTAGG	3 cut(s)	1670, 1678, 4630
BlpI	GCTNAGC	1 cut(s)	2919
BlsI	GCNGC	9 cut(s)	785, 1093, 1127, 1762, 1945, 2311, 2680, 2917, 3944
BmcAI	AGTACT	2 cut(s)	1552, 4352
Bme18I	GGWCC	5 cut(s)	558, 1495, 3670, 4838, 4938
BmeRI	GACNNNNNGTC	1 cut(s)	4185
BmeT110I	CYCGRG	4 cut(s)	306, 361, 1139, 4757
BmgBI	CACGTC	1 cut(s)	4143
BmgT120I	GGNCC	6 cut(s)	558, 1495, 3670, 3817, 4838, 4938
BpiI	GAAGAC	2 cut(s)	84, 2031
BplI	GAGNNNNNCTC	2 cut(s)	2288, 2320
Bpu10I	CCTNAGC	3 cut(s)	261, 1977, 4929
Bpu1102I	GCTNAGC	1 cut(s)	2919
Bpu14I	TTCGAA	3 cut(s)	964, 2117, 2723
BpuEI	CTTGAG	6 cut(s)	1310, 2891, 3212, 4029, 4237, 4511
BpuMI	CCSGG	4 cut(s)	1051, 1140, 1141, 4384
Bsa29I	ATCGAT	1 cut(s)	3157
BsaAI	YACGTR	1 cut(s)	1013
BsaBI	GATNNNNATC	4 cut(s)	480, 663, 2013, 3852
BsaHI	GRCGYC	2 cut(s)	1675, 2554
BsaI	GGTCTC	2 cut(s)	2341, 4432
BsaWI	WCCGGW	5 cut(s)	805, 1581, 3385, 3519, 4565
BsaXI	ACNNNNNCTCC	4 cut(s)	1888, 1918, 3383, 3413
Bsc4I	CCNNNNNNNGG	6 cut(s)	419, 707, 1056, 3404, 3815, 4448
Bse1I	ACTGG	5 cut(s)	561, 1519, 3256, 3547, 3720
Bse3DI	GCAATG	4 cut(s)	958, 1487, 4264, 4715
Bse8I	GATNNNNATC	4 cut(s)	480, 663, 2013, 3852
BseAI	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
BseBI	CCWGG	6 cut(s)	702, 1839, 2577, 3405, 3532, 4424
BseCI	ATCGAT	1 cut(s)	3157
BseJI	GATNNNNATC	4 cut(s)	480, 663, 2013, 3852
BseLI	CCNNNNNNNGG	6 cut(s)	419, 707, 1056, 3404, 3815, 4448
BseMI	GCAATG	4 cut(s)	958, 1487, 4264, 4715
BseNI	ACTGG	5 cut(s)	561, 1519, 3256, 3547, 3720
BseRI	GAGGAG	7 cut(s)	749, 1034, 1730, 2843, 3125, 3258, 4900
BseSI	GKGCMC	2 cut(s)	2629, 3796
BseX3I	CGGCCG	1 cut(s)	781
BseXI	GCAGC	7 cut(s)	1078, 1772, 1930, 2296, 2690, 2927, 3954
BseYI	CCCAGC	2 cut(s)	554, 1434
BsgI	GTGCAG	4 cut(s)	1140, 1929, 4224, 4521
Bsh1236I	CGCG	3 cut(s)	623, 4028, 4092
Bsh1285I	CGRYCG	2 cut(s)	784, 4090
BshFI	GGCC	6 cut(s)	783, 1311, 3535, 3819, 4643, 4901
BshNI	GGYRCC	1 cut(s)	1674
BshVI	ATCGAT	1 cut(s)	3157
BsiEI	CGRYCG	2 cut(s)	784, 4090
BsiHKAI	GWGCWC	5 cut(s)	994, 1473, 2629, 3172, 3187
BsiHKCI	CYCGRG	4 cut(s)	306, 361, 1139, 4757
BsiSI	CCGG	9 cut(s)	806, 1050, 1109, 1140, 1582, 3386, 3520, 4383, 4566
BslFI	GGGAC	5 cut(s)	887, 1369, 2627, 3683, 4805
BslI	CCNNNNNNNGG	6 cut(s)	419, 707, 1056, 3404, 3815, 4448
BsmBI	CGTCTC	3 cut(s)	2561, 3157, 3479
BsmFI	GGGAC	5 cut(s)	887, 1369, 2627, 3683, 4805
BsmI	GAATGC	4 cut(s)	1191, 2813, 3318, 4852
BsnI	GGCC	6 cut(s)	783, 1311, 3535, 3819, 4643, 4901
Bso31I	GGTCTC	2 cut(s)	2341, 4432
BsoBI	CYCGRG	4 cut(s)	306, 361, 1139, 4757
Bsp119I	TTCGAA	3 cut(s)	964, 2117, 2723
Bsp1286I	GDGCHC	8 cut(s)	994, 1473, 2629, 3172, 3187, 3449, 3796, 4391
Bsp13I	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
Bsp1407I	TGTACA	1 cut(s)	613
Bsp1720I	GCTNAGC	1 cut(s)	2919
Bsp19I	CCATGG	1 cut(s)	4934
BspANI	GGCC	6 cut(s)	783, 1311, 3535, 3819, 4643, 4901
BspDI	ATCGAT	1 cut(s)	3157
BspEI	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
BspFNI	CGCG	3 cut(s)	623, 4028, 4092
BspHI	TCATGA	3 cut(s)	142, 3174, 4773
BspMI	ACCTGC	1 cut(s)	2656
BspQI	GCTCTTC	1 cut(s)	4731
BspT104I	TTCGAA	3 cut(s)	964, 2117, 2723
BspT107I	GGYRCC	1 cut(s)	1674
BspTI	CTTAAG	2 cut(s)	2155, 2617
BspTNI	GGTCTC	2 cut(s)	2341, 4432
BsrBI	CCGCTC	1 cut(s)	4741
BsrDI	GCAATG	4 cut(s)	958, 1487, 4264, 4715
BsrGI	TGTACA	1 cut(s)	613
BsrI	ACTGG	5 cut(s)	561, 1519, 3256, 3547, 3720
BssNAI	GTATAC	2 cut(s)	2949, 3844
BssNI	GRCGYC	2 cut(s)	1675, 2554
BssSI	CACGAG	2 cut(s)	731, 1116
BssT1I	CCWWGG	5 cut(s)	1262, 1670, 1678, 4630, 4934
Bst1107I	GTATAC	2 cut(s)	2949, 3844
Bst2BI	CACGAG	2 cut(s)	731, 1116
Bst2UI	CCWGG	6 cut(s)	702, 1839, 2577, 3405, 3532, 4424
Bst6I	CTCTTC	8 cut(s)	219, 426, 735, 966, 2220, 3772, 4496, 4731
BstACI	GRCGYC	2 cut(s)	1675, 2554
BstAFI	CTTAAG	2 cut(s)	2155, 2617
BstAUI	TGTACA	1 cut(s)	613
BstBAI	YACGTR	1 cut(s)	1013
BstBI	TTCGAA	3 cut(s)	964, 2117, 2723
BstC8I	GCNNGC	6 cut(s)	621, 1089, 1123, 1309, 1615, 3528
BstDSI	CCRYGG	2 cut(s)	969, 4934
BstFNI	CGCG	3 cut(s)	623, 4028, 4092
BstH2I	RGCGCY	3 cut(s)	610, 1678, 3755
BstHHI	GCGC	6 cut(s)	609, 1677, 2503, 3754, 4094, 4614
BstMCI	CGRYCG	2 cut(s)	784, 4090
BstMWI	GCNNNNNNNGC	9 cut(s)	414, 912, 998, 1088, 1370, 1683, 1757, 3532, 3791
BstNI	CCWGG	6 cut(s)	702, 1839, 2577, 3405, 3532, 4424
BstNSI	RCATGY	4 cut(s)	1739, 2507, 2633, 3024
BstSFI	CTRYAG	2 cut(s)	1908, 4860
BstSLI	GKGCMC	2 cut(s)	2629, 3796
BstUI	CGCG	3 cut(s)	623, 4028, 4092
BstV1I	GCAGC	7 cut(s)	1078, 1772, 1930, 2296, 2690, 2927, 3954
BstV2I	GAAGAC	2 cut(s)	84, 2031
BstXI	CCANNNNNNTGG	4 cut(s)	2095, 3644, 4279, 4687
BstZ17I	GTATAC	2 cut(s)	2949, 3844
BstZI	CGGCCG	1 cut(s)	781
Bsu15I	ATCGAT	1 cut(s)	3157
BsuI	GTATCC	4 cut(s)	804, 1105, 2895, 3593
BsuRI	GGCC	6 cut(s)	783, 1311, 3535, 3819, 4643, 4901
BsuTUI	ATCGAT	1 cut(s)	3157
BtgI	CCRYGG	2 cut(s)	969, 4934
BtrI	CACGTC	1 cut(s)	4143
BtsI	GCAGTG	5 cut(s)	20, 1051, 1071, 3092, 4607
BveI	ACCTGC	1 cut(s)	2656
Cac8I	GCNNGC	6 cut(s)	621, 1089, 1123, 1309, 1615, 3528
CciI	TCATGA	3 cut(s)	142, 3174, 4773
CfoI	GCGC	6 cut(s)	609, 1677, 2503, 3754, 4094, 4614
Cfr13I	GGNCC	6 cut(s)	558, 1495, 3670, 3817, 4838, 4938
Cfr9I	CCCGGG	1 cut(s)	1139
ClaI	ATCGAT	1 cut(s)	3157
CsiI	ACCWGGT	1 cut(s)	4422
CspCI	CAANNNNNGTGG	2 cut(s)	2879, 2914
DinI	GGCGCC	1 cut(s)	1676
DraI	TTTAAA	1 cut(s)	3247
DraIII	CACNNNGTG	2 cut(s)	2151, 4030
DriI	GACNNNNNGTC	1 cut(s)	4185
EaeI	YGGCCR	1 cut(s)	781
EagI	CGGCCG	1 cut(s)	781
Eam1104I	CTCTTC	8 cut(s)	219, 426, 735, 966, 2220, 3772, 4496, 4731
Eam1105I	GACNNNNNGTC	1 cut(s)	4185
EarI	CTCTTC	8 cut(s)	219, 426, 735, 966, 2220, 3772, 4496, 4731
EciI	GGCGGA	2 cut(s)	312, 3964
Ecl136II	GAGCTC	1 cut(s)	992
EclXI	CGGCCG	1 cut(s)	781
Eco130I	CCWWGG	5 cut(s)	1262, 1670, 1678, 4630, 4934
Eco24I	GRGCYC	3 cut(s)	994, 3449, 4391
Eco31I	GGTCTC	2 cut(s)	2341, 4432
Eco32I	GATATC	4 cut(s)	1245, 2958, 3142, 3829
Eco47I	GGWCC	5 cut(s)	558, 1495, 3670, 4838, 4938
Eco52I	CGGCCG	1 cut(s)	781
Eco53kI	GAGCTC	1 cut(s)	992
Eco57I	CTGAAG	5 cut(s)	1850, 2064, 3036, 4137, 4806
Eco88I	CYCGRG	4 cut(s)	306, 361, 1139, 4757
EcoICRI	GAGCTC	1 cut(s)	992
EcoO109I	RGGNCCY	2 cut(s)	3670, 3817
EcoRII	CCWGG	6 cut(s)	700, 1837, 2575, 3403, 3530, 4422
EcoRV	GATATC	4 cut(s)	1245, 2958, 3142, 3829
EcoT14I	CCWWGG	5 cut(s)	1262, 1670, 1678, 4630, 4934
EcoT22I	ATGCAT	1 cut(s)	3288
EcoT38I	GRGCYC	3 cut(s)	994, 3449, 4391
EgeI	GGCGCC	1 cut(s)	1676
EheI	GGCGCC	1 cut(s)	1676
ErhI	CCWWGG	5 cut(s)	1262, 1670, 1678, 4630, 4934
Esp3I	CGTCTC	3 cut(s)	2561, 3157, 3479
FaqI	GGGAC	5 cut(s)	887, 1369, 2627, 3683, 4805
FauNDI	CATATG	3 cut(s)	1356, 1429, 3874
FblI	GTMKAC	2 cut(s)	2948, 3843
Fnu4HI	GCNGC	9 cut(s)	784, 1092, 1126, 1761, 1944, 2310, 2679, 2916, 3943
FriOI	GRGCYC	3 cut(s)	994, 3449, 4391
Fsp4HI	GCNGC	9 cut(s)	784, 1092, 1126, 1761, 1944, 2310, 2679, 2916, 3943
FspAI	RTGCGCAY	1 cut(s)	2502
FspI	TGCGCA	2 cut(s)	2502, 4613
GlaI	GCGC	6 cut(s)	608, 1676, 2502, 3753, 4093, 4613
GluI	GCNGC	9 cut(s)	784, 1092, 1126, 1761, 1944, 2310, 2679, 2916, 3943
GsaI	CCCAGC	2 cut(s)	558, 1438
HaeII	RGCGCY	3 cut(s)	610, 1678, 3755
HaeIII	GGCC	6 cut(s)	783, 1311, 3535, 3819, 4643, 4901
HapII	CCGG	9 cut(s)	806, 1050, 1109, 1140, 1582, 3386, 3520, 4383, 4566
HhaI	GCGC	6 cut(s)	609, 1677, 2503, 3754, 4094, 4614
Hin1I	GRCGYC	2 cut(s)	1675, 2554
Hin6I	GCGC	6 cut(s)	607, 1675, 2501, 3752, 4092, 4612
HinP1I	GCGC	6 cut(s)	607, 1675, 2501, 3752, 4092, 4612
HincII	GTYRAC	1 cut(s)	3913
HindII	GTYRAC	1 cut(s)	3913
HindIII	AAGCTT	4 cut(s)	1926, 2570, 4651, 4818
HpaI	GTTAAC	1 cut(s)	3913
HpaII	CCGG	9 cut(s)	806, 1050, 1109, 1140, 1582, 3386, 3520, 4383, 4566
HphI	GGTGA	9 cut(s)	1279, 2210, 2231, 2591, 3266, 3383, 3676, 4489, 4860
Hpy99I	CGWCG	2 cut(s)	2866, 4736
HpyCH4IV	ACGT	6 cut(s)	1012, 1331, 2380, 2554, 3580, 4142
HpyF10VI	GCNNNNNNNGC	9 cut(s)	414, 912, 998, 1088, 1370, 1683, 1757, 3532, 3791
HpySE526I	ACGT	6 cut(s)	1012, 1331, 2380, 2554, 3580, 4142
Hsp92I	GRCGYC	2 cut(s)	1675, 2554
HspAI	GCGC	6 cut(s)	607, 1675, 2501, 3752, 4092, 4612
KasI	GGCGCC	1 cut(s)	1674
KflI	GGGWCCC	1 cut(s)	3670
Kpn2I	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
KspAI	GTTAAC	1 cut(s)	3913
LguI	GCTCTTC	1 cut(s)	4731
LmnI	GCTCC	8 cut(s)	1021, 1600, 1717, 1972, 2488, 3271, 4386, 4568
Lsp1109I	GCAGC	7 cut(s)	1078, 1772, 1930, 2296, 2690, 2927, 3954
MabI	ACCWGGT	1 cut(s)	4422
MaeII	ACGT	6 cut(s)	1012, 1331, 2380, 2554, 3580, 4142
MaeIII	GTNAC	5 cut(s)	1069, 1565, 2098, 2801, 4138
MbiI	CCGCTC	1 cut(s)	4741
MhlI	GDGCHC	8 cut(s)	994, 1473, 2629, 3172, 3187, 3449, 3796, 4391
Mly113I	GGCGCC	1 cut(s)	1675
MmeI	TCCRAC	5 cut(s)	744, 1578, 1758, 4705, 4880
Mph1103I	ATGCAT	1 cut(s)	3288
MroI	TCCGGA	4 cut(s)	1581, 3385, 3519, 4565
MroXI	GAANNNNTTC	4 cut(s)	960, 3393, 4490, 4752
MslI	CAYNNNNRTG	6 cut(s)	147, 849, 1691, 1953, 2526, 2634
MspA1I	CMGCKG	3 cut(s)	1943, 2918, 3503
MspCI	CTTAAG	2 cut(s)	2155, 2617
MspI	CCGG	9 cut(s)	806, 1050, 1109, 1140, 1582, 3386, 3520, 4383, 4566
Mva1269I	GAATGC	4 cut(s)	1191, 2813, 3318, 4852
MvaI	CCWGG	6 cut(s)	702, 1839, 2577, 3405, 3532, 4424
MvnI	CGCG	3 cut(s)	623, 4028, 4092
MwoI	GCNNNNNNNGC	9 cut(s)	414, 912, 998, 1088, 1370, 1683, 1757, 3532, 3791
NarI	GGCGCC	1 cut(s)	1675
NciI	CCSGG	4 cut(s)	1051, 1140, 1141, 4384
NcoI	CCATGG	1 cut(s)	4934
NdeI	CATATG	3 cut(s)	1356, 1429, 3874
NmeAIII	GCCGAG	2 cut(s)	2217, 3496
NmuCI	GTSAC	3 cut(s)	1069, 1565, 4138
NsbI	TGCGCA	2 cut(s)	2502, 4613
NsiI	ATGCAT	1 cut(s)	3288
NspI	RCATGY	4 cut(s)	1739, 2507, 2633, 3024
NspV	TTCGAA	3 cut(s)	964, 2117, 2723
OliI	CACNNNNGTG	1 cut(s)	1691
PaeR7I	CTCGAG	1 cut(s)	361
PagI	TCATGA	3 cut(s)	142, 3174, 4773
PaqCI	CACCTGC	1 cut(s)	2656
PciI	ACATGT	2 cut(s)	1735, 2629
PciSI	GCTCTTC	1 cut(s)	4731
PcsI	WCGNNNNNNNCGW	5 cut(s)	861, 3163, 3645, 4314, 4764
PctI	GAATGC	4 cut(s)	1191, 2813, 3318, 4852
PdmI	GAANNNNTTC	4 cut(s)	960, 3393, 4490, 4752
PfoI	TCCNGGA	1 cut(s)	4382
PkrI	GCNGC	9 cut(s)	785, 1093, 1127, 1762, 1945, 2311, 2680, 2917, 3944
PluTI	GGCGCC	1 cut(s)	1678
Ppu21I	YACGTR	1 cut(s)	1013
PpuMI	RGGWCCY	1 cut(s)	3670
PscI	ACATGT	2 cut(s)	1735, 2629
PshBI	ATTAAT	1 cut(s)	3050
Psp124BI	GAGCTC	1 cut(s)	994
Psp1406I	AACGTT	1 cut(s)	2380
Psp5II	RGGWCCY	1 cut(s)	3670
Psp6I	CCWGG	6 cut(s)	700, 1837, 2575, 3403, 3530, 4422
PspFI	CCCAGC	2 cut(s)	554, 1434
PspGI	CCWGG	6 cut(s)	700, 1837, 2575, 3403, 3530, 4422
PspPI	GGNCC	6 cut(s)	558, 1495, 3670, 3817, 4838, 4938
PspPPI	RGGWCCY	1 cut(s)	3670
PspXI	VCTCGAGB	1 cut(s)	361
PvuII	CAGCTG	3 cut(s)	1943, 2918, 3503
RseI	CAYNNNNRTG	6 cut(s)	147, 849, 1691, 1953, 2526, 2634
SacI	GAGCTC	1 cut(s)	994
SapI	GCTCTTC	1 cut(s)	4731
SatI	GCNGC	9 cut(s)	784, 1092, 1126, 1761, 1944, 2310, 2679, 2916, 3943
Sau96I	GGNCC	6 cut(s)	558, 1495, 3670, 3817, 4838, 4938
ScaI	AGTACT	2 cut(s)	1552, 4352
SduI	GDGCHC	8 cut(s)	994, 1473, 2629, 3172, 3187, 3449, 3796, 4391
SexAI	ACCWGGT	1 cut(s)	4422
SfcI	CTRYAG	2 cut(s)	1908, 4860
SfoI	GGCGCC	1 cut(s)	1676
Sfr274I	CTCGAG	1 cut(s)	361
SfuI	TTCGAA	3 cut(s)	964, 2117, 2723
SinI	GGWCC	5 cut(s)	558, 1495, 3670, 4838, 4938
SlaI	CTCGAG	1 cut(s)	361
SmaI	CCCGGG	1 cut(s)	1141
SmiMI	CAYNNNNRTG	6 cut(s)	147, 849, 1691, 1953, 2526, 2634
SmlI	CTYRAG	9 cut(s)	361, 1289, 2155, 2617, 2870, 3227, 4044, 4216, 4526
SmoI	CTYRAG	9 cut(s)	361, 1289, 2155, 2617, 2870, 3227, 4044, 4216, 4526
SpeI	ACTAGT	1 cut(s)	4750
SspDI	GGCGCC	1 cut(s)	1674
SspI	AATATT	1 cut(s)	4361
SstI	GAGCTC	1 cut(s)	994
StyI	CCWWGG	5 cut(s)	1262, 1670, 1678, 4630, 4934
TaiI	ACGT	6 cut(s)	1015, 1334, 2383, 2557, 3583, 4145
TauI	GCSGC	2 cut(s)	786, 1128
TseFI	GTSAC	3 cut(s)	1069, 1565, 4138
TseI	GCWGC	7 cut(s)	1091, 1760, 1943, 2309, 2678, 2915, 3942
Tsp45I	GTSAC	3 cut(s)	1069, 1565, 4138
TspGWI	ACGGA	4 cut(s)	365, 2966, 3503, 3811
TspMI	CCCGGG	1 cut(s)	1139
Vha464I	CTTAAG	2 cut(s)	2155, 2617
VneI	GTGCAC	1 cut(s)	2625
VpaK11BI	GGWCC	5 cut(s)	558, 1495, 3670, 4838, 4938
VspI	ATTAAT	1 cut(s)	3050
XapI	RAATTY	4 cut(s)	1096, 1458, 2166, 3123
XbaI	TCTAGA	2 cut(s)	1447, 3460
XceI	RCATGY	4 cut(s)	1739, 2507, 2633, 3024
XcmI	CCANNNNNNNNNTGG	2 cut(s)	934, 4651
XhoI	CTCGAG	1 cut(s)	361
XmaI	CCCGGG	1 cut(s)	1139
XmaJI	CCTAGG	3 cut(s)	1670, 1678, 4630
XmiI	GTMKAC	2 cut(s)	2948, 3843
XmnI	GAANNNNTTC	4 cut(s)	960, 3393, 4490, 4752
ZraI	GACGTC	1 cut(s)	2555
ZrmI	AGTACT	2 cut(s)	1552, 4352
Zsp2I	ATGCAT	1 cut(s)	3288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.