FvH4_4g32320
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1C

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
31018387 .. 31028129
9743 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g32320.t3

Sequence Viewer

Length: 5160 bp
ATGGGAATACCTGATCGTTCCCTGCCAGATCTAATAGAGAAAGCTAGGTGCTGGATTACTAGGGGAGGAACTGAATTGAGGTCTTTGGATATGCCGAGTAACGGTTGCAAGATGTGTTGTGATTGCCATAAGGACACCAGTGGTGTTGGCCATAGATATCACTGCCAAAGCTGTGGGAGGTGGATTTGTGGGGAGTGTGTTCAGGGTGGTGAATGGGATGGTTTGAAGAGCAGTGATGGGGTTGGAGAGGAGACGATCAAGTTCTGCAAGTTTTGTTCTTTGGTTAGTTTAAGGAGGGAAGGTGGAAGAAAGTGTAGTGAGAAAGTACACCCTTCTGTTTCTCCTCGAGAAAGCCCTGAACCACCATCCCCGTGTTTTAGCAATGAAACAATCAAGTGTTCTGCAGATGATGAATCCACTGTGACTGATCATCTGTCAAAGTATCTTGAAGTACCGGATATTGGCTGTTCTCCCCGTGCTGTCAGGAGTATGCCTTCATTGGGTTCTTACCCTTCTCCAGTAGCTGTTCGTCGCTCTCACAGTAGGAGTGATGAAGAAGAGGCAGAAGATTCGGCAAAGAACTTTTGCAGCCCTTTAAGTGAATATTGTGATGACCATTTGGATATAGATAGTGTTAGTGCTAGGAGTGAGTTTTACAGTGTGAGGTCTCTGGGATCCAGTCAGTTTGATTGCTCATCTAGAATTTACTACACTTCTAATAGAGGGCATTCAGTACAGCAGAGGCAGCAAGAAATCCCAGTGACTCAGAGTGATGGCCCCTTGGGTCAACAGACTAAGGCTGTTTTTAAAAGGCCTGAGACAAGGACTGAGGATCCAGATATGACTGATGATTGCTCTGATGACTTGTCAGCTTTCCGCAGCCAATATGAGAAGCCATTGGATTTTGAAAACAATGGGATCTGGTATCCCCCTCCTCCCGATGATGCGAATGATGAGGCAGAGAGTAATTTCTTTTCCTATGATGATGAAGATGATGATATTGGAGATTCAGGTGCAATGTTTTCTTCCAGTAGTAGCTTTTCAAGCATGTTTCCTACAAAGGACAAGCAGAATGAGGGTAACAAGGAACCTCTTAGAGCTGTGGTTCAGGGGCACTTTAGAGCGCTTGTGTCACAGCTATTACAAGGTGAGGGTTTCATGAGCAAAGAGGATGGAGATGAAGACTGGCTTGACATAGTAACAACAATAGCATGGCAAGCTGCAAATTTTGTTAAACCAGATACTAGCCGAGGAGGGAGTATGGATCCTGGTGATTATGTGAGAATTAAATGTATTCCATCAGGAAGTCCAAGTGAGAGCACCCTCATAAAAGGAGTGGTTTGTACAAAGAATATAAAGCACAAGCGCATGACCTCACAGTACAAAAATCCTAGATTACTTATCTTAGGGGGAGCACTTGAATATCAGAAAGTTCCGAACCAGTTGGCCTCTTTTAACACGTTACTGCATCAGGAAAACGATCATCTTAGGATGATTATCTCAAAGATAGAGGCCCTTCGTCCAAATGTTTTGCTGGTAGAGAAAAGTGTATCTTCATATGCTCAAGAACATCTGCTAGCAAAGGAAATATCATTAGTTCTGAATGTTAAAAGGCCAGTACTAGAGCGCATAGCTCGGTGCACTGGGGCCCTTATTACTCCATCAATCGATGATATCCCTAAGTCCCGGTTGGGACATTGTGAATTGTTCCGGTTGGAAAAAATTTCTGAACAGCATGAGCCAACTAATCAGTTCAACAAGAAACCAGTGAAAACCTTGATGTTTTTTGAAGGGTGCCCAAGGCGTCTTAGTTGCACGGTCCTACTGAAAGGTGCGTGTGTTGAACAACTGAAGAAGATCAAACATGTTGTTCAGTATGCAGTGTTTGCAGCTTATCATTTGTCCCTGGAAACATCATTCCTTGTTGATGAGGGTGCTACTCTGCCCAAGATGACACCTAGACACTCAATTTCAGCTAATTCTCTAGCTTCGAGCAATTCCAAAGCTGTAGCTGATGCTTCTACTCCAGATGATGATATTTTGGGCTTGATCCCAGAAATTGATAGATCAGATTCTTTGTCTGGGCATCTTGTTCCTGACCATAGTTTTCCTTTATCTATTGGTTCTGTGGACTTTGAGGTTGGAAACGCATTTTCTGATCCATATAATGATGATTTAGCATCTCACATGTTTTCAGACACTTCTTCACATCAATACAAGGATATATCGTCACTGATTGCACAGTCTGCTGCAACAAAATGTATTTCCCAACTGGAGTTGCAAGATACCTTGCCTCATGTTGAGAGTCAACATGAGGATATTCATGAATTGACGAGCTCTGAGAAGATTGATCAGAATGAGCCTTCCAGTGAGTACTTCTCTACTGCTGACACTCATCAAAGCATATTGGTATCCTTTTCAAGCCATTGTGTGAAAGGAACTGTTTGTGAACGCTCCCGACTTCTGCGAATAAAGTTCTATGGCTGCTTTGATAAGCCACTGGGCAGATACCTTCGTGATGACCTATTTGATCAGACATCTTTCTGTCGATCTTGTAAAGAGCCAACCGAGGCCCATGTTTCATGTTACACCCATCAACAAGGAAACCTTACCATTAATGTGAGACGCCTTCCTTCAATGAAGCTACCTGGGGAAAGAGATGGTAAAATATGGATGTGGCACCGTTGTCTGAGGTGTGCCCATATAGATGGAGTTCCACCGGCAACACGTAGAGTAGTCATGTCAGATGCTGCCTGGGGACTTTCTTTTGGAAAGTTCTTGGAACTTAGCTTTTCAAACCATGCAACTGCTAATCGTGTTGCTACTTGTGGTCATTCATTGCAACGAGACTGTCTCCGTTACTATGGATTCGGGAGCATGGTGGCATTCTTCAGATATTCCCCCATTGACATTCTTTCTGTCCATTTGCCACCTTCGGTGCTTGAATTCAATGGCCAAGTTCAACCAGATTGGATAAGAAAAGAGGCAACAGAGCTCATGGGAAAGATGGAAACCTTATATGCGGAGATATCTGATGTACTTGACCACATGGAAGAAAAGAATAGATCTTTTGGATGTGAAATGTCAGGTGCAGGTGGATTACAGAACCACATTGTGGAGCTGAAAGATCAGCTTAAAAAGGAGAGGAATGACTACATTGGTTTTCTGCAACCTGCTATCGTGGAGACTTCTGACCCTGGACAAATGGCTGTAGTAGACGTTCTGGAGTTAAATCGCTTAAGAAGATCTCTTTTAATTGGTTCTCATGTTTGGGATCGCCAGCTTTATTCGTTGGATTCACTTATTCAGAAGAATCCAGTTTCCAGGGCTACAAATGGGGTTGTATCTGCTGGCTACCTGCAAGAATTGAGTACTGATCCATCTAGTAAGGATGACAGACTTGATTTTGCCCATGAAGGTAGTGATGTGTCTGAATCTCCAAAATTTCTGGTGCCTCCTGGAAATGATTTGCTGTCAGACAAAGAACCTGAGGAGGATATGCATTCAGATAGGGATATTGTTGTTGATGAGACATCCTTTGAAAGCTTACCCTCTCATAATTCTACTCTTTCTGAGAGAATAGATTCTGCATGGACGGGAACTGATCAACTTTTGGTGAAAGCTCAACCACTTCATGCATCACAGGCAGATGTAGTCCAACCTGCTGCTGTTAGGCCAACGAGCCAATTTGATGATCCTCCTTTCAGAAAGCTGGTGTCACCAATGAGAGTTCACTCGTTTGATTCAGCTGTAAGATTTCAAGAAAGGATAAGGAAAGGGTTGCCACCTTCTTCGTTGCATTTGTCAACACTACGATCATTTCATGCTTCTGGAGATTACAGGAGTATGATGAGAGATCCTCTTTATAGTGTAACAAGGACTTATTCTCAGGCATTGCCGTCAGAGGCTCAGAAGTTAAACGTAATACTAAGTTCCACACCCTCATTTATCTCCTCTGCATCTCAAATAGCTGATGGAGTCCGGTTGCTGCTTTCTCAGACAACCAACAATAATGTAGTTGTTGGTGTTTATGACAGTGAGCCCACAAGCATTATATCGTATGCCCTTAGTTCTAAGGATTACGAGGACTGGATTGGTGATAAGTTGAATGAGCATGAGGGCACTTGGAACATTCATGAAAGCTTCAAAGAAGATTCAGCAGCTCCCACCTTTTCACCATGGCAATCTTTTGGTTCTATGGACTTGGATTATATCCACCATGGAAGTTATGGATCTGAAGATGCTTCATCATCTATGAGTAACTTGTTTGCAGATCCCAAGAAATCTCCACACTTAAGGATTTCCTTTGGGGACGAGTCCTCAAATGCGGGAGGCAAAGTGAAGTTTTCTGTGACTTGTTATTTTGCAAAGCATTTTGACTCTCTTAGGAAGATATGCTGCCCTAATGAAGTGGATTTTGTACGATCCTTGAGCCGCTGCCAAAGATGGAGTGCACAAGGGGGGAAAAGCAATGTATATTTTGCCAAATCATTGGATGATAGATTCATCATAAAGCAGGTTACAAAGACGGAGTTGGAATCCTTTCAGGAATTTGCACCCGAGTATTTCAAATATTTGACAGATTCTCTTGGCTCTGGAAGCCCTACTTGTCTTGCAAAAATTCTTGGTATATATCAGGTCACTGTTAAACACCTGAAAGGTGGGAAGGAAACTAAAATGGATTTGATGGTGATGGAGAACCTTTTCTTTAAAAGAAATATATCAAGGGTATATGATCTCAAGGGGTCTGCTCGATCACGTTACAATTCTGATACTACAGGCGCAAACAAAGTACTGTTGGACATGAATTTGTTGGAATCACTCCGTACAAAACCCATATTTCTTGGAAGCAAAGCGAAGAGAAGCCTGGAAAGATCAATTTGGAATGACACAAACTTTTTAGCGTCTGTTGATGTAATGGACTACTCGCTGCTGGTTGGGGTAGACGATGAGCGGAAGGAACTGGTTTTGGGGATCATTGATTTCATGAGACAATATACGTGGGACAAGCATTTGGAGACCTGGGTCAAGGCATCTGGCATACTTGGTGGTCCGAAGAATTCTTCCCCAACAATAATCTCTCCCAAGCAATACAAGAAAAGATTCCGTAAGGCAATGACTACCTATTTTCTCACTGTACCTGATCAATGGTCTTCCTGA

Protein Analysis

1720

Amino Acids

192.36

Weight (kDa)

5.75

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIP5K PF01504 836 - 1002 3.2e-36 Phosphatidylinositol-4-phosphate 5-Kinase
PIP5K PF01504 1000 - 1058 4.6e-08 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3083
Acc36I ACCTGC 5 cut(s) 3083, 3181, 3366, 3670, 4507
AccB1I GGYRCC 3 cut(s) 1794, 2679, 3451
AccB7I CCANNNNNTGG 1 cut(s) 3115
AccBSI CCGCTC 1 cut(s) 4954
AccI GTMKAC 2 cut(s) 3216, 4944
AciI CCGC 5 cut(s) 877, 3023, 4328, 4435, 4954
AcoI YGGCCR 2 cut(s) 148, 2953
AcsI RAATTY 9 cut(s) 702, 1225, 1722, 2945, 3443, 4550, 4620, 4807, 5059
AcuI CTGAAG 3 cut(s) 1871, 2875, 4257
AcyI GRCGYC 2 cut(s) 1804, 2626
AdeI CACNNNGTG 1 cut(s) 3115
AfeI AGCGCT 1 cut(s) 1125
AfiI CCNNNNNNNGG 4 cut(s) 101, 461, 500, 3115
AflII CTTAAG 2 cut(s) 3238, 4294
AflIII ACRYGT 4 cut(s) 1458, 1864, 2187, 2726
AjnI CCWGG 9 cut(s) 1267, 1905, 2647, 2753, 3196, 3323, 3457, 4866, 5021
Alw21I GWGCWC 6 cut(s) 1322, 1417, 1643, 2339, 2997, 4456
Alw44I GTGCAC 2 cut(s) 1639, 4452
AlwNI CAGNNNCTG 2 cut(s) 524, 2750
Ama87I CYCGRG 2 cut(s) 345, 4559
Aor51HI AGCGCT 1 cut(s) 1125
ApaI GGGCCC 1 cut(s) 1651
ApaLI GTGCAC 2 cut(s) 1639, 4452
ApoI RAATTY 9 cut(s) 702, 1225, 1722, 2945, 3443, 4550, 4620, 4807, 5059
AseI ATTAAT 1 cut(s) 2616
Asp700I GAANNNNTTC 4 cut(s) 3583, 4542, 4703, 5102
AspLEI GCGC 4 cut(s) 1126, 1368, 1629, 4784
AspS9I GGNCC 7 cut(s) 776, 1513, 1647, 1648, 1819, 2572, 5051
AsuC2I CCSGG 1 cut(s) 1687
AsuHPI GGTGA 8 cut(s) 221, 1160, 1283, 3628, 3711, 4109, 4167, 4702
AsuNHI GCTAGC 1 cut(s) 1576
AvaI CYCGRG 2 cut(s) 345, 4559
AvaII GGWCC 2 cut(s) 1819, 5051
AxyI CCTNAGG 1 cut(s) 3489
BaeGI GKGCMC 7 cut(s) 1116, 1643, 1651, 1799, 2701, 4124, 4456
BaeI ACNNNNGTAYC 2 cut(s) 2500, 2533
BalI TGGCCA 2 cut(s) 150, 2955
BamHI GGATCC 3 cut(s) 674, 832, 1264
BanI GGYRCC 3 cut(s) 1794, 2679, 3451
BanII GRGCYC 4 cut(s) 1651, 2339, 2997, 4044
BbsI GAAGAC 2 cut(s) 1188, 5145
Bbv12I GWGCWC 6 cut(s) 1322, 1417, 1643, 2339, 2997, 4456
BceAI ACGGC 1 cut(s) 3883
BcgI CGANNNNNNTGC 2 cut(s) 552, 586
BciT130I CCWGG 9 cut(s) 1269, 1907, 2649, 2755, 3198, 3325, 3459, 4868, 5023
BciVI GTATCC 2 cut(s) 936, 2422
BclI TGATCA 5 cut(s) 427, 2350, 2530, 3604, 5143
BcnI CCSGG 1 cut(s) 1687
BfmI CTRYAG 4 cut(s) 402, 2007, 3210, 4776
BfoI RGCGCY 1 cut(s) 1127
BfrI CTTAAG 2 cut(s) 3238, 4294
BfuAI ACCTGC 5 cut(s) 3083, 3181, 3366, 3670, 4507
BfuI GTATCC 2 cut(s) 936, 2422
BglII AGATCT 3 cut(s) 28, 3065, 3245
BmcAI AGTACT 4 cut(s) 1620, 2375, 3373, 4794
Bme18I GGWCC 2 cut(s) 1819, 5051
BmeT110I CYCGRG 2 cut(s) 345, 4559
BmgT120I GGNCC 7 cut(s) 776, 1513, 1647, 1648, 1819, 2572, 5051
BmrI ACTGGG 3 cut(s) 752, 1653, 2510
BmtI GCTAGC 1 cut(s) 1580
BmuI ACTGGG 3 cut(s) 752, 1653, 2510
BoxI GACNNNNGTC 1 cut(s) 5024
BpiI GAAGAC 2 cut(s) 1188, 5145
BplI GAGNNNNNCTC 6 cut(s) 2363, 2395, 2838, 2870, 3844, 3876
BpmI CTGGAG 5 cut(s) 501, 2010, 2294, 3245, 3852
BpuEI CTTGAG 3 cut(s) 1548, 4450, 4724
BpuMI CCSGG 1 cut(s) 1687
Bsa29I ATCGAT 1 cut(s) 1668
BsaAI YACGTR 2 cut(s) 2729, 5001
BsaBI GATNNNNATC 1 cut(s) 1496
BsaHI GRCGYC 2 cut(s) 1804, 2626
BsaI GGTCTC 2 cut(s) 672, 5012
BsaWI WCCGGW 3 cut(s) 454, 1710, 3981
BsaXI ACNNNNNCTCC 4 cut(s) 286, 316, 4323, 4353
Bsc4I CCNNNNNNNGG 4 cut(s) 101, 461, 500, 3115
Bse118I RCCGGY 1 cut(s) 2719
Bse21I CCTNAGG 1 cut(s) 3489
Bse3DI GCAATG 6 cut(s) 388, 1023, 2837, 3893, 4477, 5121
Bse8I GATNNNNATC 1 cut(s) 1496
BseBI CCWGG 9 cut(s) 1269, 1907, 2649, 2755, 3198, 3325, 3459, 4868, 5023
BseCI ATCGAT 1 cut(s) 1668
BseGI GGATG 9 cut(s) 223, 365, 1177, 1497, 2679, 3080, 3397, 3533, 4501
BseJI GATNNNNATC 1 cut(s) 1496
BseLI CCNNNNNNNGG 4 cut(s) 101, 461, 500, 3115
BseMI GCAATG 6 cut(s) 388, 1023, 2837, 3893, 4477, 5121
BseRI GAGGAG 6 cut(s) 263, 333, 924, 1266, 3506, 3943
BseSI GKGCMC 7 cut(s) 1116, 1643, 1651, 1799, 2701, 4124, 4456
BsgI GTGCAG 1 cut(s) 3111
BshNI GGYRCC 3 cut(s) 1794, 2679, 3451
BshVI ATCGAT 1 cut(s) 1668
BsiHKAI GWGCWC 6 cut(s) 1322, 1417, 1643, 2339, 2997, 4456
BsiHKCI CYCGRG 2 cut(s) 345, 4559
BsiSI CCGG 5 cut(s) 455, 1687, 1711, 2720, 3982
BslFI GGGAC 6 cut(s) 1669, 1707, 1888, 2772, 4325, 5018
BslI CCNNNNNNNGG 4 cut(s) 101, 461, 500, 3115
BsmBI CGTCTC 2 cut(s) 245, 2617
BsmFI GGGAC 6 cut(s) 1669, 1707, 1888, 2772, 4325, 5018
BsmI GAATGC 3 cut(s) 727, 2885, 3502
Bso31I GGTCTC 2 cut(s) 672, 5012
BsoBI CYCGRG 2 cut(s) 345, 4559
Bsp120I GGGCCC 1 cut(s) 1647
Bsp1407I TGTACA 1 cut(s) 1343
Bsp19I CCATGG 2 cut(s) 4178, 4219
BspACI CCGC 5 cut(s) 877, 3023, 4328, 4435, 4954
BspDI ATCGAT 1 cut(s) 1668
BspHI TCATGA 4 cut(s) 1158, 2323, 4135, 4986
BspMAI CTGCAG 1 cut(s) 406
BspMI ACCTGC 5 cut(s) 3083, 3181, 3366, 3670, 4507
BspOI GCTAGC 1 cut(s) 1580
BspQI GCTCTTC 1 cut(s) 221
BspT107I GGYRCC 3 cut(s) 1794, 2679, 3451
BspTI CTTAAG 2 cut(s) 3238, 4294
BspTNI GGTCTC 2 cut(s) 672, 5012
BsrBI CCGCTC 1 cut(s) 4954
BsrDI GCAATG 6 cut(s) 388, 1023, 2837, 3893, 4477, 5121
BsrFI RCCGGY 1 cut(s) 2719
BsrGI TGTACA 1 cut(s) 1343
BssAI RCCGGY 1 cut(s) 2719
BssNI GRCGYC 2 cut(s) 1804, 2626
BssT1I CCWWGG 4 cut(s) 780, 1799, 4178, 4219
Bst2UI CCWGG 9 cut(s) 1269, 1907, 2649, 2755, 3198, 3325, 3459, 4868, 5023
Bst6I CTCTTC 3 cut(s) 221, 552, 4853
BstACI GRCGYC 2 cut(s) 1804, 2626
BstAFI CTTAAG 2 cut(s) 3238, 4294
BstAPI GCANNNNNTGC 2 cut(s) 1886, 2246
BstAUI TGTACA 1 cut(s) 1343
BstBAI YACGTR 2 cut(s) 2729, 5001
BstC8I GCNNGC 4 cut(s) 1218, 1578, 3281, 3352
BstDSI CCRYGG 2 cut(s) 4178, 4219
BstF5I GGATG 9 cut(s) 223, 365, 1177, 1497, 2679, 3080, 3397, 3533, 4501
BstH2I RGCGCY 1 cut(s) 1127
BstHHI GCGC 4 cut(s) 1126, 1368, 1629, 4784
BstMWI GCNNNNNNNGC 7 cut(s) 745, 1044, 1217, 1886, 2246, 3644, 4599
BstNI CCWGG 9 cut(s) 1269, 1907, 2649, 2755, 3198, 3325, 3459, 4868, 5023
BstNSI RCATGY 3 cut(s) 1051, 1868, 2191
BstPAI GACNNNNGTC 1 cut(s) 5024
BstSFI CTRYAG 4 cut(s) 402, 2007, 3210, 4776
BstSLI GKGCMC 7 cut(s) 1116, 1643, 1651, 1799, 2701, 4124, 4456
BstV2I GAAGAC 2 cut(s) 1188, 5145
BstXI CCANNNNNNTGG 3 cut(s) 173, 2708, 4492
Bsu15I ATCGAT 1 cut(s) 1668
Bsu36I CCTNAGG 1 cut(s) 3489
BsuI GTATCC 2 cut(s) 936, 2422
BsuTUI ATCGAT 1 cut(s) 1668
BtgI CCRYGG 2 cut(s) 4178, 4219
BtsCI GGATG 9 cut(s) 223, 365, 1177, 1497, 2679, 3080, 3397, 3533, 4501
BtsI GCAGTG 3 cut(s) 160, 238, 1887
BveI ACCTGC 5 cut(s) 3083, 3181, 3366, 3670, 4507
Cac8I GCNNGC 4 cut(s) 1218, 1578, 3281, 3352
CaiI CAGNNNCTG 2 cut(s) 524, 2750
CciI TCATGA 4 cut(s) 1158, 2323, 4135, 4986
CfoI GCGC 4 cut(s) 1126, 1368, 1629, 4784
Cfr10I RCCGGY 1 cut(s) 2719
Cfr13I GGNCC 7 cut(s) 776, 1513, 1647, 1648, 1819, 2572, 5051
ClaI ATCGAT 1 cut(s) 1668
CseI GACGC 3 cut(s) 1793, 2634, 4893
CspCI CAANNNNNGTGG 2 cut(s) 4982, 5017
DraI TTTAAA 2 cut(s) 808, 4711
DraIII CACNNNGTG 1 cut(s) 3115
EaeI YGGCCR 2 cut(s) 148, 2953
Eam1104I CTCTTC 3 cut(s) 221, 552, 4853
EarI CTCTTC 3 cut(s) 221, 552, 4853
Ecl136II GAGCTC 2 cut(s) 2337, 2995
Eco130I CCWWGG 4 cut(s) 780, 1799, 4178, 4219
Eco147I AGGCCT 1 cut(s) 814
Eco24I GRGCYC 4 cut(s) 1651, 2339, 2997, 4044
Eco31I GGTCTC 2 cut(s) 672, 5012
Eco32I GATATC 3 cut(s) 158, 1675, 3030
Eco47I GGWCC 2 cut(s) 1819, 5051
Eco47III AGCGCT 1 cut(s) 1125
Eco53kI GAGCTC 2 cut(s) 2337, 2995
Eco57I CTGAAG 3 cut(s) 1871, 2875, 4257
Eco81I CCTNAGG 1 cut(s) 3489
Eco88I CYCGRG 2 cut(s) 345, 4559
EcoICRI GAGCTC 2 cut(s) 2337, 2995
EcoO109I RGGNCCY 3 cut(s) 1513, 1647, 1648
EcoRI GAATTC 2 cut(s) 2945, 5059
EcoRII CCWGG 9 cut(s) 1267, 1905, 2647, 2753, 3196, 3323, 3457, 4866, 5021
EcoRV GATATC 3 cut(s) 158, 1675, 3030
EcoT14I CCWWGG 4 cut(s) 780, 1799, 4178, 4219
EcoT22I ATGCAT 2 cut(s) 3504, 3640
EcoT38I GRGCYC 4 cut(s) 1651, 2339, 2997, 4044
ErhI CCWWGG 4 cut(s) 780, 1799, 4178, 4219
Esp3I CGTCTC 2 cut(s) 245, 2617
FaqI GGGAC 6 cut(s) 1669, 1707, 1888, 2772, 4325, 5018
FauI CCCGC 1 cut(s) 4321
FauNDI CATATG 1 cut(s) 1558
FbaI TGATCA 5 cut(s) 427, 2350, 2530, 3604, 5143
FblI GTMKAC 2 cut(s) 3216, 4944
FokI GGATG 9 cut(s) 230, 352, 1184, 1504, 2686, 3087, 3404, 3520, 4508
FriOI GRGCYC 4 cut(s) 1651, 2339, 2997, 4044
GlaI GCGC 4 cut(s) 1125, 1367, 1628, 4783
GsuI CTGGAG 5 cut(s) 501, 2010, 2294, 3245, 3852
HaeII RGCGCY 1 cut(s) 1127
HapII CCGG 5 cut(s) 455, 1687, 1711, 2720, 3982
HgaI GACGC 3 cut(s) 1793, 2634, 4893
HhaI GCGC 4 cut(s) 1126, 1368, 1629, 4784
Hin1I GRCGYC 2 cut(s) 1804, 2626
Hin6I GCGC 4 cut(s) 1124, 1366, 1627, 4782
HinP1I GCGC 4 cut(s) 1124, 1366, 1627, 4782
HincII GTYRAC 3 cut(s) 788, 2309, 3807
HindII GTYRAC 3 cut(s) 788, 2309, 3807
HindIII AAGCTT 2 cut(s) 3544, 4141
HpaII CCGG 5 cut(s) 455, 1687, 1711, 2720, 3982
HphI GGTGA 8 cut(s) 221, 1160, 1283, 3628, 3711, 4109, 4167, 4702
Hpy99I CGWCG 1 cut(s) 534
HpyCH4IV ACGT 6 cut(s) 1460, 2728, 3219, 3921, 4759, 5000
HpyF10VI GCNNNNNNNGC 7 cut(s) 745, 1044, 1217, 1886, 2246, 3644, 4599
HpySE526I ACGT 6 cut(s) 1460, 2728, 3219, 3921, 4759, 5000
Hsp92I GRCGYC 2 cut(s) 1804, 2626
HspAI GCGC 4 cut(s) 1124, 1366, 1627, 4782
Ksp22I TGATCA 5 cut(s) 427, 2350, 2530, 3604, 5143
LguI GCTCTTC 1 cut(s) 221
LmnI GCTCC 5 cut(s) 1412, 2459, 2874, 3118, 4168
MaeII ACGT 6 cut(s) 1460, 2728, 3219, 3921, 4759, 5000
MbiI CCGCTC 1 cut(s) 4954
MlsI TGGCCA 2 cut(s) 150, 2955
MluNI TGGCCA 2 cut(s) 150, 2955
MlyI GAGTC 5 cut(s) 757, 2314, 3987, 4325, 4373
MmeI TCCRAC 8 cut(s) 223, 1695, 2122, 3273, 3682, 4515, 4779, 4794
Mox20I TGGCCA 2 cut(s) 150, 2955
Mph1103I ATGCAT 2 cut(s) 3504, 3640
MroXI GAANNNNTTC 4 cut(s) 3583, 4542, 4703, 5102
MscI TGGCCA 2 cut(s) 150, 2955
MslI CAYNNNNRTG 3 cut(s) 370, 2618, 2706
Msp20I TGGCCA 2 cut(s) 150, 2955
MspA1I CMGCKG 2 cut(s) 3749, 4437
MspCI CTTAAG 2 cut(s) 3238, 4294
MspI CCGG 5 cut(s) 455, 1687, 1711, 2720, 3982
Mva1269I GAATGC 3 cut(s) 727, 2885, 3502
MvaI CCWGG 9 cut(s) 1269, 1907, 2649, 2755, 3198, 3325, 3459, 4868, 5023
MwoI GCNNNNNNNGC 7 cut(s) 745, 1044, 1217, 1886, 2246, 3644, 4599
NciI CCSGG 1 cut(s) 1687
NcoI CCATGG 2 cut(s) 4178, 4219
NdeI CATATG 1 cut(s) 1558
NheI GCTAGC 1 cut(s) 1576
NmeAIII GCCGAG 2 cut(s) 120, 1274
NmuCI GTSAC 7 cut(s) 421, 760, 1131, 2229, 3717, 4351, 4639
NsiI ATGCAT 2 cut(s) 3504, 3640
NspI RCATGY 3 cut(s) 1051, 1868, 2191
PaeR7I CTCGAG 1 cut(s) 345
PagI TCATGA 4 cut(s) 1158, 2323, 4135, 4986
PaqCI CACCTGC 1 cut(s) 3083
PceI AGGCCT 1 cut(s) 814
PciI ACATGT 2 cut(s) 1864, 2187
PciSI GCTCTTC 1 cut(s) 221
PctI GAATGC 3 cut(s) 727, 2885, 3502
PdmI GAANNNNTTC 4 cut(s) 3583, 4542, 4703, 5102
PflMI CCANNNNNTGG 1 cut(s) 3115
PfoI TCCNGGA 1 cut(s) 3457
PleI GAGTC 5 cut(s) 757, 2313, 3986, 4324, 4373
PpsI GAGTC 5 cut(s) 757, 2313, 3986, 4324, 4373
Ppu21I YACGTR 2 cut(s) 2729, 5001
PscI ACATGT 2 cut(s) 1864, 2187
PshAI GACNNNNGTC 1 cut(s) 5024
PshBI ATTAAT 1 cut(s) 2616
Psp124BI GAGCTC 2 cut(s) 2339, 2997
Psp6I CCWGG 9 cut(s) 1267, 1905, 2647, 2753, 3196, 3323, 3457, 4866, 5021
PspGI CCWGG 9 cut(s) 1267, 1905, 2647, 2753, 3196, 3323, 3457, 4866, 5021
PspOMI GGGCCC 1 cut(s) 1647
PspPI GGNCC 7 cut(s) 776, 1513, 1647, 1648, 1819, 2572, 5051
PsrI GAACNNNNNNTAC 2 cut(s) 3204, 3236
PstI CTGCAG 1 cut(s) 406
PstNI CAGNNNCTG 2 cut(s) 524, 2750
PvuII CAGCTG 1 cut(s) 3749
RseI CAYNNNNRTG 3 cut(s) 370, 2618, 2706
SacI GAGCTC 2 cut(s) 2339, 2997
SapI GCTCTTC 1 cut(s) 221
Sau96I GGNCC 7 cut(s) 776, 1513, 1647, 1648, 1819, 2572, 5051
ScaI AGTACT 4 cut(s) 1620, 2375, 3373, 4794
SchI GAGTC 5 cut(s) 757, 2314, 3987, 4325, 4373
SfcI CTRYAG 4 cut(s) 402, 2007, 3210, 4776
Sfr274I CTCGAG 1 cut(s) 345
SinI GGWCC 2 cut(s) 1819, 5051
SlaI CTCGAG 1 cut(s) 345
SmiMI CAYNNNNRTG 3 cut(s) 370, 2618, 2706
SmlI CTYRAG 6 cut(s) 345, 1563, 3238, 4294, 4429, 4739
SmoI CTYRAG 6 cut(s) 345, 1563, 3238, 4294, 4429, 4739
SseBI AGGCCT 1 cut(s) 814
SsiI CCGC 5 cut(s) 877, 3023, 4328, 4435, 4954
SspI AATATT 2 cut(s) 605, 4574
SstI GAGCTC 2 cut(s) 2339, 2997
StuI AGGCCT 1 cut(s) 814
StyI CCWWGG 4 cut(s) 780, 1799, 4178, 4219
TaiI ACGT 6 cut(s) 1463, 2731, 3222, 3924, 4762, 5003
TaqI TCGA 5 cut(s) 346, 1668, 1991, 2548, 4753
TatI WGTACW 9 cut(s) 325, 733, 1343, 1380, 1618, 2373, 3037, 3371, 4792
TauI GCSGC 1 cut(s) 4437
TseFI GTSAC 7 cut(s) 421, 760, 1131, 2229, 3717, 4351, 4639
Tsp45I GTSAC 7 cut(s) 421, 760, 1131, 2229, 3717, 4351, 4639
TspGWI ACGGA 4 cut(s) 2846, 4544, 4814, 5096
Van91I CCANNNNNTGG 1 cut(s) 3115
Vha464I CTTAAG 2 cut(s) 3238, 4294
VneI GTGCAC 2 cut(s) 1639, 4452
VpaK11BI GGWCC 2 cut(s) 1819, 5051
VspI ATTAAT 1 cut(s) 2616
XapI RAATTY 9 cut(s) 702, 1225, 1722, 2945, 3443, 4550, 4620, 4807, 5059
XbaI TCTAGA 1 cut(s) 698
XceI RCATGY 3 cut(s) 1051, 1868, 2191
XcmI CCANNNNNNNNNTGG 1 cut(s) 4226
XhoI CTCGAG 1 cut(s) 345
XmiI GTMKAC 2 cut(s) 3216, 4944
XmnI GAANNNNTTC 4 cut(s) 3583, 4542, 4703, 5102
ZrmI AGTACT 4 cut(s) 1620, 2375, 3373, 4794
Zsp2I ATGCAT 2 cut(s) 3504, 3640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.