Rh4BG396600
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
54794904 .. 54802797
7894 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG396600.1

Sequence Viewer

Length: 5082 bp
ATGGGAATACCTGATCGTTCCCTACCAGATCTAATAGACAAAGTGAGGTCCTGGAATTCTAGGGGAACAACTGAGTTAAGGTCTTTGTCTGGAGAGTTGGATATGCCCGGTAACGGTAACGGTAACGGTTGCAAGATGTGTTGTGATTGCCATACAGACACTTGTGGAGTTGGTCATAGATATCACTGCCAAAGCTGTGGGCGGTGGATTTGTGGCAAGTGTATTCAGGGTGGTGAATGGGATGGTTTGACGAGCAGTGATGAGAAGTTCTGCAAGTTTTGTTCTGAGGTTAGATTAAGGAGGGAAGGTGGAAGAAAGTGTAGTGAGAAAGTGCATCCTTCTGCCTCTCCTGAAGAAAGCCCTGAACCACCATCCCCGTGTTTTAGCAGCGAAACTATCAGGTGTTGTGCGGATGATGAATCCACTCGGACTGATCATCTGTCAAAGTATCTTGAAGCCCGGGATATTGGCTATTCTCCCCATGCTGTCAAGAGTATGACTTCATTTAGTTCTTACCCATCTCCAGTAGCTGTTCATCGCTCTCATAGTAGGAGTGATGAAGAAGAGGCAGAAGATTCGGCAAAGAACTTTTGCAGCCCTTCAAGTGAATATTGTGATGACAATTTGGATATAGATTTAAATAGTGTTAGTGCTAGAAGTGAGTTATACAGTTTGAGGTCACTGGGATCAAGTCAGTTTGATTGCTCATCTAGAATTTACTATACTTCTAGTAAAGGGCATCCAGTACAGCATAGGCATGAAGGCATCCCAGCGACTCAGAGTGATGAACCCTTTGGTCGACAGACTAAGGCTGTTTTAAAAAGGCCTGAGAGACGGACCGAGGATCCAGATATTACTGATGATTGCTCTGATGACTTGTCAGCGTTCCGCAGCCAATATGAGAAACCATTGGATTTTGATAATAATGGTCTCATCTGGTATCCACCTCCTCCCGATGATGAGAATGATGAGGCAGAGAGTAATTTCTTTTCCTATGATGATGAAGATGATGATATTGGAGATTCAGGTGCAATGTTTTCTTCCAGTAGTAGCCTTTCAAGCATGTTTCCTGCAAAGGATAAACAGAATGAGGGTAACAAGGAACCTCTTAGAGCTGTGGTTCAGGGGCATTTTAGAGCGCTTGTATCACAACTCTTACAAGGTGAGGGTTTCATGAGCAAAGAGGATGGAGACGAAGACTGGCTTGACATAGTAACAACAATAGCATGGCAAGCTGCAAATTTTGTTAAACCGGATACTAGCCGAGGAGGTAGTATGGATCCTGGTGATTATGTGAAAGTTAAATGTATTCCATCAGGAAGTCCAAGCGACAGCACCCTTGTAAAAGGAGTAGTTTGTACAAAGAATATAAAGCACAAGCGCATGACATCACAGTACAAAAATCCTAGATTACTTATTTTAGGGGGAGCACTTGAATATCAGAAAGTTCCAAACCAGTTGGCCTCTTTTGACACGTTACTGCATCAGGAAAACGATCATCTTAGAGCGGTTATCTCAAAGATAGAAGCTCTTCGTCCAAATGTTCTGCTGGTAGAGAAAAGCGTATCTTCATATGCTCAAGACCATCTGCTAGCAAAGGAAATATCATTAGTTCTGAATGTTAAAAGGCCAGTCCTAGAGCGCATAGCTCGGTGCACTGGCGCCCTTATTACTCCATCAATCGATGATATCCCTAGAAGCCGCTTGGGACATTGTGAATTGTTTCGGTTGGAAAAAATTTCTGAACAGCATGAGCCAGCTAATCAGTTCAACAAGAAACCAGTGAAAACCTTGATGTTTTTTGAAGGGTGTCCAAGGCGTCTTTGTTGCACAGTCCTGCTTAAAGGTGCATGTGTTGAACAACTGAAGAAGATCAAACATGTTGTTCAGTATGCAGTGTTTGCAGCTTATCATTTATCCCTAGAAACATCATTCCTTGTTGATGAGGGTGCTACTCTGCCCAAGATACCTAGACAGTCAATTTCAGCTAATTCTCTTACTTCGAGCAATTCCAAAGCTGTAGCTGATGCTTCTGCTCAAGATGATGATATTTTGGGTTTGATCCCAGAAATTGAAGGATCAGAATCTTTGTCTGGCCATCTTGTTCCTGACCATAGTTTTTCGTTATCTAATGGTTCTGTGGACTTTGAGGTTGGAAATGCATTTTCTGATCCCTATAATGATGATTTAGCATCTCATGTGTTTTCGGACACTTCTTCACATCAATACAAGGATATAAAGGCACTGATTGCACATTCTGCTGAGACAAAAAACATTTCCCGACTGGAGTTGCAAGAAACATTGCCTCATGTCGGGAGTCAACACGAGGATATTCATGAATTGACGAGCTCTGAGAGGATTGATCAGAATGAGCCTTCCAGTGAGTACTTCTCTACTGCTGACACTCATCAGAGCATTTTGGTATCCTTTTCAAGCCACTGTGTACTGAAAGGAACTGTTTGTGAACGCTCCCGACTTCTGCGAATAAAGTTCTATGGCTGCTTCGATAAGCCACTTGGAAGATATCTTCGTGATGACCTATTTGATCAGACATCTTTCTGTCGATCTTGTAAAGAGCCAGCCGAGGCCCATGTTCTATGTTACACCCATCAACAAGGAAACCTTACCATTAATGTGAGATGCCTTCCTTCACTGAAGCTACCTGGGGAAAGAGATGGTAAAATATGGATGTGGCACCGTTGTCTGAGGTGCGCACATATAGATGGAGTTCCGCCGGCAACACGTAGAGTAGTCATGTCAGATGCTGCCTGGGGACTTTCTTTTGGAAAGTTCTTGGAACTTAGCTTTTCAAACCATGCAACTGCTAATCGCGTAGCTACTTGTGGCCATTCATTGCAACGAGACTGTCTCCGTTACTACGGATTTGGGAGCATGGTGGCATTCTTCAGATATTCCCCCATTGATATTCTTTCTGTCCATTTGCCGCCTTCAGTGCTTGAATTCAATGGCCAAGTTCAACCAGATTGGATAAGAAAAGAGGCAACAGAGCTCATGGGAAAGATGGAAACCTTATATGCAGAGATATCTGATATACTTGACTGTATGGAAGAGAAAAATAGATCTTTTGGATGTGAAATGTCAGGGGCAGGTGGATTACAGAACCACATTGTGGAGCTGAAAGATCAGCTTAAAAAGGAAAGGAATGACTACATTGGTTTTCTGCAACCTGCTTTTGTGGAGACTTCTGAACTGGGCCAAATGGCTGTAGTAGACGTTTTGGAGCTAAATCGCTTGAGACGGTCTCTTTTAATTGGTTCTCATGTTTGGGATCGCCAGCTTTATTCATTGGATTCACTTATTCAGAAGAATCCAGTTTCCAGGGCTACAGATGGGGTTGTATCTGTTGGCTACCTGCAAGAGTTGAGTACTGATCCATCTAGTAAGGATGGCAGGCTTGATTTTGCCCATGAAGGTAATAATGTGTCTGAATGTCCAAAATTTGTGGTGCCTTCTGGAAATGATTTGCTGCCAGACAAAGAACCTAGCGCACCGATGTTCGAACGTTCTGAGGAGGATATGCATTCAGATAGGGAAATTGTTGTTGGTGAGACATCCTATGAAAGCTTCCCCTCGCATGTTTCTACTCTTTCTGAGAGAATAGATTCTGCATGGACTGGAACTGATCAACTTCTGGCGAAAGCTCAACCACTTCATGCATCACAGGCAGATGGAGTCCAACCTGCTGCTGTTAGGCTGACGAGCCAAAATGATGATCCTCCTTTTAGAAGGTTAGTGTCACCAATGAGAGTTCACTCTTTTGATTCTGCAGTAAGATTCCAAGAAAGGATTAGGAAAGGGTTGCCACCTTCTTCGTTGCATTTGTCGACACTAAGATCATTTCATACTTCTGGAGATTACAGGAGTATGGTTAGAGATCCTCTTTCTAGTGTAACAAGGACTTATTCTCAGGCATTGCCGTTAGAGGCTCAGAAGTTAAACGTAATACTAAGTTCCACACCCTCATTTATCTCCTCTGCATCTCAAATAGCTGATGGAGTCAGGTTGCTACTCTCTCAGACAACCAACAATAATGTAGTTGTTGGTGTTTATGACAGCGAGCCCACAAGCATAATTTCGTATGCCCTTAGTTCTAAGGATTACGAGGACTGGGTTGGTGATAAGTTGAATGAGCATGAGGGGGCATGGAGCATCCATGAAAGCTACAAAGAAGATTCAGCAGCTCCCACCTTTTCACCATGGCAATCTTTTGGTTCTATGGACTTGGAGTATATCCACTATGGAAGTTATGGATCTGAAGATGCTTCATCCTCTATGAGTAACTTGTTTGCAGATCCCAAGAAATCTCCACACTTAAGGATTTCCTTTGGGGACGAGTCCTCAAATGCTGGAGGCAAAGTGAAGTTTTCTGTGACTTGTTATTTTGCAAAGCATTTTGACTCTCTTAGGAAGATATGCTGCCCTAATGAAGTGGATTTTGTACGATCCTTGAGCCGCTGCCAGAGATGGAGTGCACAAGGGGGAAAAAGCAATGTATATTTTGCCAAATCATTGGATGATAGATTTATCATAAAGCAAGTTACAAAGACAGAGTTGGAATCTTTTCAGGAATTTGCACCTGAGTATTTTAAATATTTGACAGATTCTCTTAGCTCTGGAAGCCCAACTTGTCTTGCAAAAATTCTTGGTATATATCAGGTCACTGTCAAACACCTAAAAGGTGGGAAGGAAACTAAAATGGATTTGATGGTGATGGAGAACCTTTTCTTTAAAAGAAATATATCAAGGGTATATGATCTCAAGGGGTCTGCTCGATCACGTTACAATTCTGATACTACAGGCACAAACAAAGTACTGTTGGACATGAATTTGTTGGAATCATTACGTACAAAACCCATATTTCTTGGAAGCAAAGCAAAGAGAAGCCTGGAAAGATCAATTTGGAATGATACATCCTTTTTAGCGGTATGCCTTCACCCCCTTCCCTTTCTCTTGCATCTCACGGACTCATATCTTGGATGCATTGGGATTTCGAAAATTATTTTCAAAGGTTTCACAGCTTCTCCTGTGCTTAGAATGGACACACTCATTTCATGTGATTAA

Protein Analysis

1693

Amino Acids

188.83

Weight (kDa)

5.72

Isoelectric Point (pI)

50.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 398 - 641 1.1e-30 TCP-1/cpn60 chaperonin family
PIP5K PF01504 1499 - 1648 4.5e-26 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3098
Acc16I TGCGCA 1 cut(s) 2713
Acc36I ACCTGC 4 cut(s) 3098, 3196, 3381, 3709
AccB1I GGYRCC 3 cut(s) 1661, 2694, 3466
AccB7I CCANNNNNTGG 1 cut(s) 3130
AccBSI CCGCTC 1 cut(s) 1508
AccI GTMKAC 3 cut(s) 799, 3231, 3845
AccII CGCG 1 cut(s) 2832
AciI CCGC 9 cut(s) 202, 410, 889, 1508, 1702, 2732, 2945, 4474, 4943
AclI AACGTT 1 cut(s) 3523
AcoI YGGCCR 3 cut(s) 2095, 2845, 2968
AcsI RAATTY 9 cut(s) 55, 714, 1240, 1737, 2960, 3458, 4589, 4659, 4846
AcuI CTGAAG 6 cut(s) 372, 1886, 2675, 2890, 2934, 4296
AcyI GRCGYC 2 cut(s) 1662, 1819
AdeI CACNNNGTG 1 cut(s) 3130
AfaI GTAC 9 cut(s) 747, 1360, 1397, 2387, 2445, 3388, 4461, 4833, 4867
AfeI AGCGCT 1 cut(s) 1140
AfiI CCNNNNNNNGG 3 cut(s) 113, 2312, 3130
AflII CTTAAG 1 cut(s) 4333
AflIII ACRYGT 3 cut(s) 1473, 1879, 2741
AjnI CCWGG 6 cut(s) 50, 1282, 2662, 2768, 3338, 4905
AjuI GAANNNNNNNTTGG 2 cut(s) 3546, 3578
Alw21I GWGCWC 5 cut(s) 1432, 1658, 2351, 3012, 4495
Alw44I GTGCAC 2 cut(s) 1654, 4491
AlwNI CAGNNNCTG 2 cut(s) 530, 2765
Ama87I CYCGRG 1 cut(s) 459
Aor51HI AGCGCT 1 cut(s) 1140
AoxI GGCC 8 cut(s) 824, 1461, 1628, 2095, 2586, 2845, 2968, 3214
ApaLI GTGCAC 2 cut(s) 1654, 4491
ApoI RAATTY 9 cut(s) 55, 714, 1240, 1737, 2960, 3458, 4589, 4659, 4846
AseI ATTAAT 1 cut(s) 2631
Asp700I GAANNNNTTC 5 cut(s) 1530, 1722, 3622, 4581, 4742
AspLEI GCGC 6 cut(s) 1141, 1383, 1644, 1664, 2714, 3509
AspS9I GGNCC 4 cut(s) 48, 837, 2587, 3214
AsuC2I CCSGG 3 cut(s) 108, 460, 461
AsuHPI GGTGA 9 cut(s) 245, 1175, 1298, 3578, 3750, 4148, 4206, 4741, 4946
AsuII TTCGAA 2 cut(s) 3519, 5012
AsuNHI GCTAGC 1 cut(s) 1591
AvaI CYCGRG 1 cut(s) 459
AvaII GGWCC 2 cut(s) 48, 837
BaeGI GKGCMC 2 cut(s) 1658, 4495
BalI TGGCCA 3 cut(s) 2097, 2847, 2970
BamHI GGATCC 2 cut(s) 844, 1279
BanI GGYRCC 3 cut(s) 1661, 2694, 3466
BanII GRGCYC 3 cut(s) 2351, 3012, 4083
BauI CACGAG 1 cut(s) 2324
BbsI GAAGAC 1 cut(s) 1203
Bbv12I GWGCWC 5 cut(s) 1432, 1658, 2351, 3012, 4495
BceAI ACGGC 1 cut(s) 3922
BcgI CGANNNNNNTGC 2 cut(s) 558, 592
BciT130I CCWGG 6 cut(s) 52, 1284, 2664, 2770, 3340, 4907
BciVI GTATCC 3 cut(s) 951, 1249, 2434
BclI TGATCA 4 cut(s) 433, 2362, 2545, 3643
BcnI CCSGG 3 cut(s) 108, 460, 461
BfmI CTRYAG 5 cut(s) 2019, 3225, 3345, 3786, 4815
BfoI RGCGCY 2 cut(s) 1142, 1665
BfrI CTTAAG 1 cut(s) 4333
BfuAI ACCTGC 4 cut(s) 3098, 3196, 3381, 3709
BfuI GTATCC 3 cut(s) 951, 1249, 2434
BglII AGATCT 2 cut(s) 28, 3080
BmcAI AGTACT 3 cut(s) 2387, 3388, 4833
Bme1390I CCNGG 9 cut(s) 52, 108, 460, 461, 1284, 2664, 2770, 3340, 4907
Bme18I GGWCC 2 cut(s) 48, 837
BmeT110I CYCGRG 1 cut(s) 459
BmgT120I GGNCC 4 cut(s) 48, 837, 2587, 3214
BmiI GGNNCC 6 cut(s) 846, 1104, 1281, 1663, 2696, 3468
BmrFI CCNGG 9 cut(s) 52, 108, 460, 461, 1284, 2664, 2770, 3340, 4907
BmrI ACTGGG 3 cut(s) 692, 3221, 4138
BmtI GCTAGC 1 cut(s) 1595
BmuI ACTGGG 3 cut(s) 692, 3221, 4138
BpiI GAAGAC 1 cut(s) 1203
BplI GAGNNNNNCTC 6 cut(s) 2375, 2407, 2853, 2885, 3247, 3279
BpmI CTGGAG 5 cut(s) 111, 507, 2306, 3891, 4389
Bpu14I TTCGAA 2 cut(s) 3519, 5012
BpuEI CTTGAG 5 cut(s) 1563, 2022, 3274, 4489, 4763
BpuMI CCSGG 3 cut(s) 108, 460, 461
Bsa29I ATCGAT 1 cut(s) 1683
BsaAI YACGTR 2 cut(s) 2744, 4865
BsaBI GATNNNNATC 1 cut(s) 2083
BsaHI GRCGYC 2 cut(s) 1662, 1819
BsaI GGTCTC 2 cut(s) 935, 3267
BsaJI CCNNGG 9 cut(s) 459, 840, 1264, 1814, 2583, 2663, 2769, 3339, 4217
BsaWI WCCGGW 1 cut(s) 1252
BsaXI ACNNNNNCTCC 6 cut(s) 292, 322, 4362, 4392, 5026, 5056
Bsc4I CCNNNNNNNGG 3 cut(s) 113, 2312, 3130
Bse118I RCCGGY 1 cut(s) 2734
Bse3DI GCAATG 5 cut(s) 1038, 2300, 2852, 3932, 4516
Bse8I GATNNNNATC 1 cut(s) 2083
BseBI CCWGG 6 cut(s) 52, 1284, 2664, 2770, 3340, 4907
BseCI ATCGAT 1 cut(s) 1683
BseDI CCNNGG 9 cut(s) 459, 840, 1264, 1814, 2583, 2663, 2769, 3339, 4217
BseJI GATNNNNATC 1 cut(s) 2083
BseLI CCNNNNNNNGG 3 cut(s) 113, 2312, 3130
BseMI GCAATG 5 cut(s) 1038, 2300, 2852, 3932, 4516
BseRI GAGGAG 4 cut(s) 939, 1281, 3545, 3982
BseSI GKGCMC 2 cut(s) 1658, 4495
BseYI CCCAGC 1 cut(s) 769
Bsh1236I CGCG 1 cut(s) 2832
BshFI GGCC 8 cut(s) 826, 1463, 1630, 2097, 2588, 2847, 2970, 3216
BshNI GGYRCC 3 cut(s) 1661, 2694, 3466
BshVI ATCGAT 1 cut(s) 1683
BsiHKAI GWGCWC 5 cut(s) 1432, 1658, 2351, 3012, 4495
BsiHKCI CYCGRG 1 cut(s) 459
BsiSI CCGG 4 cut(s) 108, 460, 1253, 2735
BslFI GGGAC 3 cut(s) 1722, 2787, 4364
BslI CCNNNNNNNGG 3 cut(s) 113, 2312, 3130
BsmBI CGTCTC 3 cut(s) 826, 1185, 3250
BsmFI GGGAC 3 cut(s) 1722, 2787, 4364
BsmI GAATGC 2 cut(s) 2900, 3541
BsnI GGCC 8 cut(s) 826, 1463, 1630, 2097, 2588, 2847, 2970, 3216
Bso31I GGTCTC 2 cut(s) 935, 3267
BsoBI CYCGRG 1 cut(s) 459
Bsp119I TTCGAA 2 cut(s) 3519, 5012
Bsp1286I GDGCHC 6 cut(s) 1432, 1658, 2351, 3012, 4083, 4495
Bsp1407I TGTACA 1 cut(s) 1358
Bsp19I CCATGG 1 cut(s) 4217
BspACI CCGC 9 cut(s) 202, 410, 889, 1508, 1702, 2732, 2945, 4474, 4943
BspANI GGCC 8 cut(s) 826, 1463, 1630, 2097, 2588, 2847, 2970, 3216
BspDI ATCGAT 1 cut(s) 1683
BspFNI CGCG 1 cut(s) 2832
BspHI TCATGA 2 cut(s) 1173, 2335
BspLI GGNNCC 6 cut(s) 846, 1104, 1281, 1663, 2696, 3468
BspMAI CTGCAG 1 cut(s) 3790
BspMI ACCTGC 4 cut(s) 3098, 3196, 3381, 3709
BspOI GCTAGC 1 cut(s) 1595
BspQI GCTCTTC 1 cut(s) 1536
BspT104I TTCGAA 2 cut(s) 3519, 5012
BspT107I GGYRCC 3 cut(s) 1661, 2694, 3466
BspTI CTTAAG 1 cut(s) 4333
BspTNI GGTCTC 2 cut(s) 935, 3267
BsrBI CCGCTC 1 cut(s) 1508
BsrDI GCAATG 5 cut(s) 1038, 2300, 2852, 3932, 4516
BsrFI RCCGGY 1 cut(s) 2734
BsrGI TGTACA 1 cut(s) 1358
BssAI RCCGGY 1 cut(s) 2734
BssECI CCNNGG 9 cut(s) 459, 840, 1264, 1814, 2583, 2663, 2769, 3339, 4217
BssNI GRCGYC 2 cut(s) 1662, 1819
BssSI CACGAG 1 cut(s) 2324
BssT1I CCWWGG 2 cut(s) 1814, 4217
Bst2BI CACGAG 1 cut(s) 2324
Bst2UI CCWGG 6 cut(s) 52, 1284, 2664, 2770, 3340, 4907
Bst6I CTCTTC 3 cut(s) 558, 1536, 3063
BstACI GRCGYC 2 cut(s) 1662, 1819
BstAFI CTTAAG 1 cut(s) 4333
BstAPI GCANNNNNTGC 3 cut(s) 1901, 2249, 2258
BstAUI TGTACA 1 cut(s) 1358
BstBAI YACGTR 2 cut(s) 2744, 4865
BstBI TTCGAA 2 cut(s) 3519, 5012
BstC8I GCNNGC 8 cut(s) 1233, 1593, 1758, 2580, 2736, 3296, 3413, 4079
BstDSI CCRYGG 1 cut(s) 4217
BstFNI CGCG 1 cut(s) 2832
BstH2I RGCGCY 2 cut(s) 1142, 1665
BstHHI GCGC 6 cut(s) 1141, 1383, 1644, 1664, 2714, 3509
BstMWI GCNNNNNNNGC 8 cut(s) 1059, 1232, 1901, 2249, 2258, 2953, 3683, 4638
BstNI CCWGG 6 cut(s) 52, 1284, 2664, 2770, 3340, 4907
BstNSI RCATGY 4 cut(s) 1066, 1854, 1883, 3599
BstSCI CCNGG 9 cut(s) 50, 106, 458, 459, 1282, 2662, 2768, 3338, 4905
BstSFI CTRYAG 5 cut(s) 2019, 3225, 3345, 3786, 4815
BstSLI GKGCMC 2 cut(s) 1658, 4495
BstSNI TACGTA 1 cut(s) 4865
BstUI CGCG 1 cut(s) 2832
BstV2I GAAGAC 1 cut(s) 1203
BstX2I RGATCY 7 cut(s) 28, 844, 1279, 3080, 3895, 4271, 4312
BstXI CCANNNNNNTGG 2 cut(s) 197, 4531
BstYI RGATCY 7 cut(s) 28, 844, 1279, 3080, 3895, 4271, 4312
Bsu15I ATCGAT 1 cut(s) 1683
BsuI GTATCC 3 cut(s) 951, 1249, 2434
BsuRI GGCC 8 cut(s) 826, 1463, 1630, 2097, 2588, 2847, 2970, 3216
BsuTUI ATCGAT 1 cut(s) 1683
BtgI CCRYGG 1 cut(s) 4217
BtgZI GCGATG 1 cut(s) 521
BtsI GCAGTG 3 cut(s) 184, 262, 1902
BveI ACCTGC 4 cut(s) 3098, 3196, 3381, 3709
Cac8I GCNNGC 8 cut(s) 1233, 1593, 1758, 2580, 2736, 3296, 3413, 4079
CaiI CAGNNNCTG 2 cut(s) 530, 2765
CciI TCATGA 2 cut(s) 1173, 2335
CfoI GCGC 6 cut(s) 1141, 1383, 1644, 1664, 2714, 3509
Cfr10I RCCGGY 1 cut(s) 2734
Cfr13I GGNCC 4 cut(s) 48, 837, 2587, 3214
Cfr9I CCCGGG 1 cut(s) 459
ClaI ATCGAT 1 cut(s) 1683
CpoI CGGWCCG 1 cut(s) 837
CseI GACGC 1 cut(s) 1808
Csp6I GTAC 9 cut(s) 746, 1359, 1396, 2386, 2444, 3387, 4460, 4832, 4866
CspCI CAANNNNNGTGG 2 cut(s) 3444, 3479
CspI CGGWCCG 1 cut(s) 837
CviQI GTAC 9 cut(s) 746, 1359, 1396, 2386, 2444, 3387, 4460, 4832, 4866
DinI GGCGCC 1 cut(s) 1663
DraI TTTAAA 4 cut(s) 639, 819, 4609, 4750
DraIII CACNNNGTG 1 cut(s) 3130
EaeI YGGCCR 3 cut(s) 2095, 2845, 2968
Eam1104I CTCTTC 3 cut(s) 558, 1536, 3063
EarI CTCTTC 3 cut(s) 558, 1536, 3063
EciI GGCGGA 1 cut(s) 2721
Ecl136II GAGCTC 2 cut(s) 2349, 3010
Eco105I TACGTA 1 cut(s) 4865
Eco130I CCWWGG 2 cut(s) 1814, 4217
Eco147I AGGCCT 1 cut(s) 826
Eco24I GRGCYC 3 cut(s) 2351, 3012, 4083
Eco31I GGTCTC 2 cut(s) 935, 3267
Eco32I GATATC 4 cut(s) 182, 1690, 2525, 3045
Eco47I GGWCC 2 cut(s) 48, 837
Eco47III AGCGCT 1 cut(s) 1140
Eco53kI GAGCTC 2 cut(s) 2349, 3010
Eco57I CTGAAG 6 cut(s) 372, 1886, 2675, 2890, 2934, 4296
Eco88I CYCGRG 1 cut(s) 459
EcoICRI GAGCTC 2 cut(s) 2349, 3010
EcoO109I RGGNCCY 1 cut(s) 48
EcoRI GAATTC 2 cut(s) 55, 2960
EcoRII CCWGG 6 cut(s) 50, 1282, 2662, 2768, 3338, 4905
EcoRV GATATC 4 cut(s) 182, 1690, 2525, 3045
EcoT14I CCWWGG 2 cut(s) 1814, 4217
EcoT22I ATGCAT 4 cut(s) 2164, 3543, 3679, 5003
EcoT38I GRGCYC 3 cut(s) 2351, 3012, 4083
EgeI GGCGCC 1 cut(s) 1663
EheI GGCGCC 1 cut(s) 1663
ErhI CCWWGG 2 cut(s) 1814, 4217
Esp3I CGTCTC 3 cut(s) 826, 1185, 3250
FaqI GGGAC 3 cut(s) 1722, 2787, 4364
FauNDI CATATG 1 cut(s) 1573
FbaI TGATCA 4 cut(s) 433, 2362, 2545, 3643
FblI GTMKAC 3 cut(s) 799, 3231, 3845
FriOI GRGCYC 3 cut(s) 2351, 3012, 4083
FspAI RTGCGCAY 1 cut(s) 2713
FspI TGCGCA 1 cut(s) 2713
GlaI GCGC 6 cut(s) 1140, 1382, 1643, 1663, 2713, 3508
GsaI CCCAGC 1 cut(s) 773
GsuI CTGGAG 5 cut(s) 111, 507, 2306, 3891, 4389
HaeII RGCGCY 2 cut(s) 1142, 1665
HaeIII GGCC 8 cut(s) 826, 1463, 1630, 2097, 2588, 2847, 2970, 3216
HapII CCGG 4 cut(s) 108, 460, 1253, 2735
HgaI GACGC 1 cut(s) 1808
HhaI GCGC 6 cut(s) 1141, 1383, 1644, 1664, 2714, 3509
Hin1I GRCGYC 2 cut(s) 1662, 1819
Hin6I GCGC 6 cut(s) 1139, 1381, 1642, 1662, 2712, 3507
HinP1I GCGC 6 cut(s) 1139, 1381, 1642, 1662, 2712, 3507
HincII GTYRAC 3 cut(s) 800, 2321, 3846
HindII GTYRAC 3 cut(s) 800, 2321, 3846
HindIII AAGCTT 1 cut(s) 3583
HpaII CCGG 4 cut(s) 108, 460, 1253, 2735
HphI GGTGA 9 cut(s) 245, 1175, 1298, 3578, 3750, 4148, 4206, 4741, 4946
HpyCH4IV ACGT 7 cut(s) 1475, 2743, 3234, 3523, 3960, 4798, 4864
HpyF10VI GCNNNNNNNGC 8 cut(s) 1059, 1232, 1901, 2249, 2258, 2953, 3683, 4638
HpySE526I ACGT 7 cut(s) 1475, 2743, 3234, 3523, 3960, 4798, 4864
Hsp92I GRCGYC 2 cut(s) 1662, 1819
HspAI GCGC 6 cut(s) 1139, 1381, 1642, 1662, 2712, 3507
KasI GGCGCC 1 cut(s) 1661
KroI GCCGGC 1 cut(s) 2734
KroNI GCCGGC 1 cut(s) 2736
Ksp22I TGATCA 4 cut(s) 433, 2362, 2545, 3643
LguI GCTCTTC 1 cut(s) 1536
LmnI GCTCC 7 cut(s) 1427, 2474, 2889, 3133, 3241, 4167, 4207
MaeII ACGT 7 cut(s) 1475, 2743, 3234, 3523, 3960, 4798, 4864
MbiI CCGCTC 1 cut(s) 1508
MflI RGATCY 7 cut(s) 28, 844, 1279, 3080, 3895, 4271, 4312
MhlI GDGCHC 6 cut(s) 1432, 1658, 2351, 3012, 4083, 4495
MlsI TGGCCA 3 cut(s) 2097, 2847, 2970
MluNI TGGCCA 3 cut(s) 2097, 2847, 2970
Mly113I GGCGCC 1 cut(s) 1662
MlyI GAGTC 7 cut(s) 769, 2326, 3702, 4026, 4364, 4412, 4979
MmeI TCCRAC 7 cut(s) 78, 1710, 2134, 3721, 4554, 4818, 4833
Mox20I TGGCCA 3 cut(s) 2097, 2847, 2970
Mph1103I ATGCAT 4 cut(s) 2164, 3543, 3679, 5003
MroNI GCCGGC 1 cut(s) 2734
MroXI GAANNNNTTC 5 cut(s) 1530, 1722, 3622, 4581, 4742
MscI TGGCCA 3 cut(s) 2097, 2847, 2970
MslI CAYNNNNRTG 4 cut(s) 376, 756, 2633, 2721
Msp20I TGGCCA 3 cut(s) 2097, 2847, 2970
MspA1I CMGCKG 1 cut(s) 4476
MspCI CTTAAG 1 cut(s) 4333
MspI CCGG 4 cut(s) 108, 460, 1253, 2735
MspR9I CCNGG 9 cut(s) 52, 108, 460, 461, 1284, 2664, 2770, 3340, 4907
Mva1269I GAATGC 2 cut(s) 2900, 3541
MvaI CCWGG 6 cut(s) 52, 1284, 2664, 2770, 3340, 4907
MvnI CGCG 1 cut(s) 2832
MwoI GCNNNNNNNGC 8 cut(s) 1059, 1232, 1901, 2249, 2258, 2953, 3683, 4638
NaeI GCCGGC 1 cut(s) 2736
NarI GGCGCC 1 cut(s) 1662
NciI CCSGG 3 cut(s) 108, 460, 461
NcoI CCATGG 1 cut(s) 4217
NdeI CATATG 1 cut(s) 1573
NgoMIV GCCGGC 1 cut(s) 2734
NheI GCTAGC 1 cut(s) 1591
NlaIV GGNNCC 6 cut(s) 846, 1104, 1281, 1663, 2696, 3468
NmeAIII GCCGAG 2 cut(s) 1289, 2608
NmuCI GTSAC 4 cut(s) 678, 3756, 4390, 4678
NsbI TGCGCA 1 cut(s) 2713
NsiI ATGCAT 4 cut(s) 2164, 3543, 3679, 5003
NspI RCATGY 4 cut(s) 1066, 1854, 1883, 3599
NspV TTCGAA 2 cut(s) 3519, 5012
PagI TCATGA 2 cut(s) 1173, 2335
PaqCI CACCTGC 1 cut(s) 3098
PceI AGGCCT 1 cut(s) 826
PciI ACATGT 1 cut(s) 1879
PciSI GCTCTTC 1 cut(s) 1536
PctI GAATGC 2 cut(s) 2900, 3541
PdiI GCCGGC 1 cut(s) 2736
PdmI GAANNNNTTC 5 cut(s) 1530, 1722, 3622, 4581, 4742
PflMI CCANNNNNTGG 1 cut(s) 3130
PfoI TCCNGGA 1 cut(s) 50
PleI GAGTC 7 cut(s) 769, 2325, 3701, 4025, 4363, 4412, 4979
PluTI GGCGCC 1 cut(s) 1665
PpsI GAGTC 7 cut(s) 769, 2325, 3701, 4025, 4363, 4412, 4979
Ppu21I YACGTR 2 cut(s) 2744, 4865
PpuMI RGGWCCY 1 cut(s) 48
PscI ACATGT 1 cut(s) 1879
PshBI ATTAAT 1 cut(s) 2631
Psp124BI GAGCTC 2 cut(s) 2351, 3012
Psp1406I AACGTT 1 cut(s) 3523
Psp5II RGGWCCY 1 cut(s) 48
Psp6I CCWGG 6 cut(s) 50, 1282, 2662, 2768, 3338, 4905
PspFI CCCAGC 1 cut(s) 769
PspGI CCWGG 6 cut(s) 50, 1282, 2662, 2768, 3338, 4905
PspN4I GGNNCC 6 cut(s) 846, 1104, 1281, 1663, 2696, 3468
PspPI GGNCC 4 cut(s) 48, 837, 2587, 3214
PspPPI RGGWCCY 1 cut(s) 48
PstI CTGCAG 1 cut(s) 3790
PstNI CAGNNNCTG 2 cut(s) 530, 2765
PsuI RGATCY 7 cut(s) 28, 844, 1279, 3080, 3895, 4271, 4312
RsaI GTAC 9 cut(s) 747, 1360, 1397, 2387, 2445, 3388, 4461, 4833, 4867
RsaNI GTAC 9 cut(s) 746, 1359, 1396, 2386, 2444, 3387, 4460, 4832, 4866
RseI CAYNNNNRTG 4 cut(s) 376, 756, 2633, 2721
Rsr2I CGGWCCG 1 cut(s) 837
RsrII CGGWCCG 1 cut(s) 837
SacI GAGCTC 2 cut(s) 2351, 3012
SalI GTCGAC 2 cut(s) 798, 3844
SapI GCTCTTC 1 cut(s) 1536
Sau96I GGNCC 4 cut(s) 48, 837, 2587, 3214
ScaI AGTACT 3 cut(s) 2387, 3388, 4833
SchI GAGTC 7 cut(s) 769, 2326, 3702, 4026, 4364, 4412, 4979
ScrFI CCNGG 9 cut(s) 52, 108, 460, 461, 1284, 2664, 2770, 3340, 4907
SduI GDGCHC 6 cut(s) 1432, 1658, 2351, 3012, 4083, 4495
SfcI CTRYAG 5 cut(s) 2019, 3225, 3345, 3786, 4815
SfoI GGCGCC 1 cut(s) 1663
SfuI TTCGAA 2 cut(s) 3519, 5012
SinI GGWCC 2 cut(s) 48, 837
SmaI CCCGGG 1 cut(s) 461
SmiI ATTTAAAT 1 cut(s) 639
SmiMI CAYNNNNRTG 4 cut(s) 376, 756, 2633, 2721
SmlI CTYRAG 6 cut(s) 1578, 2037, 3253, 4333, 4468, 4778
SmoI CTYRAG 6 cut(s) 1578, 2037, 3253, 4333, 4468, 4778
SnaBI TACGTA 1 cut(s) 4865
SseBI AGGCCT 1 cut(s) 826
SsiI CCGC 9 cut(s) 202, 410, 889, 1508, 1702, 2732, 2945, 4474, 4943
SspDI GGCGCC 1 cut(s) 1661
SspI AATATT 2 cut(s) 611, 4613
SstI GAGCTC 2 cut(s) 2351, 3012
StuI AGGCCT 1 cut(s) 826
StyD4I CCNGG 9 cut(s) 50, 106, 458, 459, 1282, 2662, 2768, 3338, 4905
StyI CCWWGG 2 cut(s) 1814, 4217
SwaI ATTTAAAT 1 cut(s) 639
TaiI ACGT 7 cut(s) 1478, 2746, 3237, 3526, 3963, 4801, 4867
TaqI TCGA 9 cut(s) 799, 1683, 2003, 2505, 2563, 3519, 3845, 4792, 5012
TaqII GACCGA 1 cut(s) 854
TatI WGTACW 7 cut(s) 745, 1358, 1395, 2385, 2443, 3386, 4831
TauI GCSGC 3 cut(s) 1704, 2947, 4476
TseFI GTSAC 4 cut(s) 678, 3756, 4390, 4678
Tsp45I GTSAC 4 cut(s) 678, 3756, 4390, 4678
TspGWI ACGGA 4 cut(s) 850, 2861, 2895, 4997
TspMI CCCGGG 1 cut(s) 459
Van91I CCANNNNNTGG 1 cut(s) 3130
Vha464I CTTAAG 1 cut(s) 4333
VneI GTGCAC 2 cut(s) 1654, 4491
VpaK11BI GGWCC 2 cut(s) 48, 837
VspI ATTAAT 1 cut(s) 2631
XapI RAATTY 9 cut(s) 55, 714, 1240, 1737, 2960, 3458, 4589, 4659, 4846
XbaI TCTAGA 1 cut(s) 710
XceI RCATGY 4 cut(s) 1066, 1854, 1883, 3599
XmaI CCCGGG 1 cut(s) 459
XmiI GTMKAC 3 cut(s) 799, 3231, 3845
XmnI GAANNNNTTC 5 cut(s) 1530, 1722, 3622, 4581, 4742
ZrmI AGTACT 3 cut(s) 2387, 3388, 4833
Zsp2I ATGCAT 4 cut(s) 2164, 3543, 3679, 5003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.