Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005863

Physical Location & Seq

Genomic Coordinates Forward (+)

27488217 .. 27490831

Gene Structure 2615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G73090.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 921 bp

ATGAAGATAGGGGCGGTTCAGGAGAGTTGGCTTATACGGACTCCGGTACTTAGGCCGGCGGTTCAAGGCTCAATTCGCCGGAATGGAAAGCCGCAGCTTGAGTTTCCTCTCTCGAACAGGTTGTCTCGTTGTGTGGTTATGGCTGTTCAAGGAGGGAGAGGATATGAATCTCCATGGGATGAAAAACCCTATGAAACTCTTCCTACTGGTAAAAGGGTTTATGTTGATGAATCTGATGTTGTGACGTTTCTTGATCCCCCCAAGGAGTTGATTCCATTGGACCCTGCTTCATATAACCCGGCTGCTTATCTCTGGAAAAAGATTGAAGACATCCCCGAAGAGAGGCGCCACCATTTGCTGCAATTATTAGAGCCAAGGCTTATATCTAGAGCATGGGAAATAGCAAGCACTCGGTATGAAGATCCAAAGTTAGCTAAAATGACTGCATCCAAGATATTCTCTGCTGGAAATGCGGAAATTCCAGTTGAATACTTCAGCTGCCGAACAAGTCAGGGTCCACTAATCATATCTTGGATAAATTTCTTCAAGATGGCTTTGTTTCGCTCCTACAACGGCCAAATCTATGGGCGAGTTTGTGGTGGACCGGTAGTTTCAACCCTTGCCAATGCTTTCAGTCCACTATACTTTGAGGTCACAGAAGCAATGGAAGTAATGGCCACAGAAGAACCCTGCGATGTAGCGTGCAAATTCGGCGATGGGCTTCTTGCTATTGAAGATTACCCACAAGGCTTCCCTCGACCAGCAAAACATCCTTATCCATTCAACGACAGTGTCGTCATTTACATACGGCACATCGGTCCAGGTGTATGCGTAGGACAGGCATGGCAAGAAGGTAGAGAACTGCAACAAGTTCCTCAACGATTATGCTCGGACATTCTTATGGTCAAACAATACAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

306

Amino Acids

34.69

Weight (kDa)

6.9

Isoelectric Point (pI)

53.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73090 AT1G73090
fragaria_vesca	FvH4_6g37290 FvH4_6g37290 FvH4_6g37290 FvH4_6g37290 FvH4_6g37290
malus_domestica	MD09G1158700.v1.1
prunus_persica	Prupe.3G167100_v2.0.a1 Prupe.3G167100_v2.0.a1
pyrus_communis	pycom09g07730
rosa_chinensis	RchiOBHm_Chr1g0381181 RchiOBHm_Chr2g0150121
rosa_laevigata	RLG00000020468
rosa_multiflora	Rmu_sc0000156.1_g000009 Rmu_sc0009445.1_g000003
rosa_roxburghii	Rroxscaffold_2G00097430
rosa_rugosa	Rorug02G0419300
rosa_samantha	Rh1AG306600 Rh1CG035500 Rh2AG477900 Rh2BG490500 Rh2CG464100 Rh2DG499300 Rh4AG247100 Rh5DG267800
rosa_wichuraiana	Rw2G039010 Rw5G000910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	794
AccB1I	GGYRCC	1 cut(s)	345
AciI	CCGC	4 cut(s)	14, 59, 92, 473
AclWI	GGATC	2 cut(s)	248, 416
AcoI	YGGCCR	2 cut(s)	574, 675
AcsI	RAATTY	3 cut(s)	477, 538, 707
AcuI	CTGAAG	1 cut(s)	478
AcyI	GRCGYC	1 cut(s)	346
AfaI	GTAC	1 cut(s)	48
AfiI	CCNNNNNNNGG	1 cut(s)	342
AgeI	ACCGGT	1 cut(s)	604
AgsI	TTSAA	8 cut(s)	65, 149, 326, 488, 547, 615, 734, 784
AjnI	CCWGG	1 cut(s)	820
AluBI	AGCT	3 cut(s)	97, 434, 498
AluI	AGCT	3 cut(s)	97, 434, 498
Alw26I	GTCTC	1 cut(s)	129
AlwI	GGATC	2 cut(s)	248, 416
AoxI	GGCC	3 cut(s)	53, 574, 675
ApeKI	GCWGC	4 cut(s)	94, 302, 358, 498
ApoI	RAATTY	3 cut(s)	477, 538, 707
ArsI	GACNNNNNNTTYG	2 cut(s)	107, 139
AsiGI	ACCGGT	1 cut(s)	604
Asp700I	GAANNNNTTC	1 cut(s)	198
AspLEI	GCGC	1 cut(s)	348
AspS9I	GGNCC	4 cut(s)	280, 515, 602, 818
AsuC2I	CCSGG	1 cut(s)	299
AvaII	GGWCC	4 cut(s)	280, 515, 602, 818
BalI	TGGCCA	1 cut(s)	677
BanI	GGYRCC	1 cut(s)	345
BbsI	GAAGAC	1 cut(s)	333
BbvI	GCAGC	4 cut(s)	106, 289, 345, 485
BccI	CCATC	2 cut(s)	544, 710
BceAI	ACGGC	2 cut(s)	589, 824
BciT130I	CCWGG	1 cut(s)	822
BcnI	CCSGG	1 cut(s)	299
BcoDI	GTCTC	1 cut(s)	129
BfaI	CTAG	1 cut(s)	387
BfoI	RGCGCY	1 cut(s)	349
BisI	GCNGC	5 cut(s)	92, 95, 303, 359, 499
BlsI	GCNGC	5 cut(s)	93, 96, 304, 360, 500
Bme1390I	CCNGG	2 cut(s)	299, 822
Bme18I	GGWCC	4 cut(s)	280, 515, 602, 818
BmgT120I	GGNCC	4 cut(s)	280, 515, 602, 818
BmiI	GGNNCC	3 cut(s)	282, 347, 516
BmrFI	CCNGG	2 cut(s)	299, 822
BmsI	GCATC	1 cut(s)	455
BpiI	GAAGAC	1 cut(s)	333
BpuEI	CTTGAG	1 cut(s)	119
BpuMI	CCSGG	1 cut(s)	299
BsaBI	GATNNNNATC	1 cut(s)	166
BsaHI	GRCGYC	1 cut(s)	346
BsaJI	CCNNGG	3 cut(s)	173, 261, 374
BsaWI	WCCGGW	2 cut(s)	43, 604
Bsc4I	CCNNNNNNNGG	1 cut(s)	342
Bse118I	RCCGGY	2 cut(s)	55, 604
Bse1I	ACTGG	2 cut(s)	211, 482
Bse3DI	GCAATG	1 cut(s)	669
Bse8I	GATNNNNATC	1 cut(s)	166
BseBI	CCWGG	1 cut(s)	822
BseDI	CCNNGG	3 cut(s)	173, 261, 374
BseGI	GGATG	4 cut(s)	184, 330, 446, 769
BseJI	GATNNNNATC	1 cut(s)	166
BseLI	CCNNNNNNNGG	1 cut(s)	342
BseMI	GCAATG	1 cut(s)	669
BseNI	ACTGG	2 cut(s)	211, 482
BseXI	GCAGC	4 cut(s)	106, 289, 345, 485
BshFI	GGCC	3 cut(s)	55, 576, 677
BshNI	GGYRCC	1 cut(s)	345
BshTI	ACCGGT	1 cut(s)	604
BsiSI	CCGG	5 cut(s)	44, 56, 79, 299, 605
BslI	CCNNNNNNNGG	1 cut(s)	342
BsmAI	GTCTC	1 cut(s)	129
BsnI	GGCC	3 cut(s)	55, 576, 677
Bsp143I	GATC	2 cut(s)	253, 421
Bsp19I	CCATGG	1 cut(s)	173
BspACI	CCGC	4 cut(s)	14, 59, 92, 473
BspANI	GGCC	3 cut(s)	55, 576, 677
BspLI	GGNNCC	3 cut(s)	282, 347, 516
BspPI	GGATC	2 cut(s)	248, 416
BspT107I	GGYRCC	1 cut(s)	345
BsrDI	GCAATG	1 cut(s)	669
BsrFI	RCCGGY	2 cut(s)	55, 604
BsrI	ACTGG	2 cut(s)	211, 482
BssAI	RCCGGY	2 cut(s)	55, 604
BssECI	CCNNGG	3 cut(s)	173, 261, 374
BssMI	GATC	2 cut(s)	253, 421
BssNI	GRCGYC	1 cut(s)	346
BssT1I	CCWWGG	3 cut(s)	173, 261, 374
Bst2UI	CCWGG	1 cut(s)	822
Bst4CI	ACNGT	1 cut(s)	791
Bst6I	CTCTTC	2 cut(s)	204, 333
BstACI	GRCGYC	1 cut(s)	346
BstC8I	GCNNGC	3 cut(s)	57, 406, 703
BstDEI	CTNAG	1 cut(s)	50
BstDSI	CCRYGG	1 cut(s)	173
BstF5I	GGATG	4 cut(s)	184, 330, 446, 769
BstH2I	RGCGCY	1 cut(s)	349
BstHHI	GCGC	1 cut(s)	348
BstKTI	GATC	2 cut(s)	256, 424
BstMAI	GTCTC	1 cut(s)	129
BstMBI	GATC	2 cut(s)	253, 421
BstMWI	GCNNNNNNNGC	3 cut(s)	75, 470, 711
BstNI	CCWGG	1 cut(s)	822
BstSCI	CCNGG	2 cut(s)	297, 820
BstV1I	GCAGC	4 cut(s)	106, 289, 345, 485
BstV2I	GAAGAC	1 cut(s)	333
BstX2I	RGATCY	1 cut(s)	421
BstXI	CCANNNNNNTGG	1 cut(s)	584
BstYI	RGATCY	1 cut(s)	421
BsuRI	GGCC	3 cut(s)	55, 576, 677
BtgI	CCRYGG	1 cut(s)	173
BtgZI	GCGATG	2 cut(s)	708, 729
BtsCI	GGATG	4 cut(s)	184, 330, 446, 769
BtsIMutI	CAGTG	1 cut(s)	796
Cac8I	GCNNGC	3 cut(s)	57, 406, 703
CfoI	GCGC	1 cut(s)	348
Cfr10I	RCCGGY	2 cut(s)	55, 604
Cfr13I	GGNCC	4 cut(s)	280, 515, 602, 818
Csp6I	GTAC	1 cut(s)	47
CspAI	ACCGGT	1 cut(s)	604
CviAII	CATG	3 cut(s)	174, 393, 843
CviQI	GTAC	1 cut(s)	47
DdeI	CTNAG	1 cut(s)	50
DinI	GGCGCC	1 cut(s)	347
DpnI	GATC	2 cut(s)	255, 423
DpnII	GATC	2 cut(s)	253, 421
DrdI	GACNNNNNNGTC	1 cut(s)	794
DseDI	GACNNNNNNGTC	1 cut(s)	794
EaeI	YGGCCR	2 cut(s)	574, 675
Eam1104I	CTCTTC	2 cut(s)	204, 333
EarI	CTCTTC	2 cut(s)	204, 333
Eco130I	CCWWGG	3 cut(s)	173, 261, 374
Eco47I	GGWCC	4 cut(s)	280, 515, 602, 818
Eco57I	CTGAAG	1 cut(s)	478
EcoRII	CCWGG	1 cut(s)	820
EcoT14I	CCWWGG	3 cut(s)	173, 261, 374
EgeI	GGCGCC	1 cut(s)	347
EheI	GGCGCC	1 cut(s)	347
ErhI	CCWWGG	3 cut(s)	173, 261, 374
FaeI	CATG	3 cut(s)	177, 396, 846
FatI	CATG	3 cut(s)	173, 392, 842
Fnu4HI	GCNGC	5 cut(s)	92, 95, 303, 359, 499
FokI	GGATG	4 cut(s)	191, 317, 433, 756
Fsp4HI	GCNGC	5 cut(s)	92, 95, 303, 359, 499
FspBI	CTAG	1 cut(s)	387
GlaI	GCGC	1 cut(s)	347
GluI	GCNGC	5 cut(s)	92, 95, 303, 359, 499
HaeII	RGCGCY	1 cut(s)	349
HaeIII	GGCC	3 cut(s)	55, 576, 677
HapII	CCGG	5 cut(s)	44, 56, 79, 299, 605
HhaI	GCGC	1 cut(s)	348
Hin1I	GRCGYC	1 cut(s)	346
Hin1II	CATG	3 cut(s)	177, 396, 846
Hin6I	GCGC	1 cut(s)	346
HinP1I	GCGC	1 cut(s)	346
HinfI	GANTC	4 cut(s)	40, 167, 230, 271
HpaII	CCGG	5 cut(s)	44, 56, 79, 299, 605
Hpy166II	GTNNAC	3 cut(s)	518, 602, 638
Hpy188I	TCNGA	2 cut(s)	235, 892
Hpy188III	TCNNGA	6 cut(s)	20, 112, 251, 313, 387, 547
Hpy8I	GTNNAC	3 cut(s)	518, 602, 638
HpyAV	CCTTC	1 cut(s)	845
HpyCH4III	ACNGT	1 cut(s)	791
HpyCH4IV	ACGT	1 cut(s)	245
HpyCH4V	TGCA	4 cut(s)	361, 446, 705, 865
HpyF10VI	GCNNNNNNNGC	3 cut(s)	75, 470, 711
HpyF3I	CTNAG	1 cut(s)	50
HpySE526I	ACGT	1 cut(s)	245
Hsp92I	GRCGYC	1 cut(s)	346
Hsp92II	CATG	3 cut(s)	177, 396, 846
HspAI	GCGC	1 cut(s)	346
KasI	GGCGCC	1 cut(s)	345
KroI	GCCGGC	1 cut(s)	55
KroNI	GCCGGC	1 cut(s)	57
Kzo9I	GATC	2 cut(s)	253, 421
LmnI	GCTCC	1 cut(s)	569
Lsp1109I	GCAGC	4 cut(s)	106, 289, 345, 485
LweI	GCATC	1 cut(s)	455
MaeI	CTAG	1 cut(s)	387
MaeII	ACGT	1 cut(s)	245
MaeIII	GTNAC	2 cut(s)	241, 652
MalI	GATC	2 cut(s)	255, 423
MboI	GATC	2 cut(s)	253, 421
MboII	GAAGA	8 cut(s)	16, 191, 338, 350, 431, 535, 695, 746
MflI	RGATCY	1 cut(s)	421
MlsI	TGGCCA	1 cut(s)	677
MluCI	AATT	5 cut(s)	72, 362, 477, 538, 707
MluNI	TGGCCA	1 cut(s)	677
Mly113I	GGCGCC	1 cut(s)	346
MlyI	GAGTC	1 cut(s)	34
MnlI	CCTC	7 cut(s)	117, 146, 152, 336, 643, 765, 885
Mox20I	TGGCCA	1 cut(s)	677
MroNI	GCCGGC	1 cut(s)	55
MroXI	GAANNNNTTC	1 cut(s)	198
MscI	TGGCCA	1 cut(s)	677
MslI	CAYNNNNRTG	1 cut(s)	899
Msp20I	TGGCCA	1 cut(s)	677
MspA1I	CMGCKG	1 cut(s)	498
MspI	CCGG	5 cut(s)	44, 56, 79, 299, 605
MspR9I	CCNGG	2 cut(s)	299, 822
MvaI	CCWGG	1 cut(s)	822
MwoI	GCNNNNNNNGC	3 cut(s)	75, 470, 711
NaeI	GCCGGC	1 cut(s)	57
NarI	GGCGCC	1 cut(s)	346
NciI	CCSGG	1 cut(s)	299
NcoI	CCATGG	1 cut(s)	173
NdeII	GATC	2 cut(s)	253, 421
NgoMIV	GCCGGC	1 cut(s)	55
NlaIII	CATG	3 cut(s)	177, 396, 846
NlaIV	GGNNCC	3 cut(s)	282, 347, 516
NmuCI	GTSAC	2 cut(s)	241, 652
PcsI	WCGNNNNNNNCGW	1 cut(s)	792
PdiI	GCCGGC	1 cut(s)	57
PdmI	GAANNNNTTC	1 cut(s)	198
PfeI	GAWTC	3 cut(s)	167, 230, 271
PflFI	GACNNNGTC	1 cut(s)	791
PinAI	ACCGGT	1 cut(s)	604
PkrI	GCNGC	5 cut(s)	93, 96, 304, 360, 500
PleI	GAGTC	1 cut(s)	34
PluTI	GGCGCC	1 cut(s)	349
PpsI	GAGTC	1 cut(s)	34
Psp6I	CCWGG	1 cut(s)	820
PspGI	CCWGG	1 cut(s)	820
PspN4I	GGNNCC	3 cut(s)	282, 347, 516
PspPI	GGNCC	4 cut(s)	280, 515, 602, 818
PsuI	RGATCY	1 cut(s)	421
PsyI	GACNNNGTC	1 cut(s)	791
PvuII	CAGCTG	1 cut(s)	498
RsaI	GTAC	1 cut(s)	48
RsaNI	GTAC	1 cut(s)	47
RseI	CAYNNNNRTG	1 cut(s)	899
SatI	GCNGC	5 cut(s)	92, 95, 303, 359, 499
Sau3AI	GATC	2 cut(s)	253, 421
Sau96I	GGNCC	4 cut(s)	280, 515, 602, 818
SchI	GAGTC	1 cut(s)	34
ScrFI	CCNGG	2 cut(s)	299, 822
SetI	ASST	8 cut(s)	99, 122, 248, 436, 500, 654, 826, 856
SfaNI	GCATC	1 cut(s)	455
SfoI	GGCGCC	1 cut(s)	347
SinI	GGWCC	4 cut(s)	280, 515, 602, 818
SmiMI	CAYNNNNRTG	1 cut(s)	899
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
Sse9I	AATT	5 cut(s)	72, 362, 477, 538, 707
SsiI	CCGC	4 cut(s)	14, 59, 92, 473
SspDI	GGCGCC	1 cut(s)	345
SspMI	CTAG	1 cut(s)	387
StyD4I	CCNGG	2 cut(s)	297, 820
StyI	CCWWGG	3 cut(s)	173, 261, 374
TaaI	ACNGT	1 cut(s)	791
TaiI	ACGT	1 cut(s)	248
TaqI	TCGA	2 cut(s)	113, 757
TaqII	GACCGA	1 cut(s)	806
TasI	AATT	5 cut(s)	72, 362, 477, 538, 707
TauI	GCSGC	1 cut(s)	94
TfiI	GAWTC	3 cut(s)	167, 230, 271
TscAI	CASTG	1 cut(s)	796
TseFI	GTSAC	2 cut(s)	241, 652
TseI	GCWGC	4 cut(s)	94, 302, 358, 498
Tsp45I	GTSAC	2 cut(s)	241, 652
TspDTI	ATGAA	7 cut(s)	17, 180, 195, 207, 243, 279, 432
TspGWI	ACGGA	1 cut(s)	52
TspRI	CASTG	1 cut(s)	796
Tth111I	GACNNNGTC	1 cut(s)	791
VpaK11BI	GGWCC	4 cut(s)	280, 515, 602, 818
XapI	RAATTY	3 cut(s)	477, 538, 707
XbaI	TCTAGA	1 cut(s)	386
XmnI	GAANNNNTTC	1 cut(s)	198
XspI	CTAG	1 cut(s)	387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.