Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011742

Physical Location & Seq

Genomic Coordinates Reverse (-)

27690350 .. 27691819

Gene Structure 1470 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G73655.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 705 bp

ATGGCGACTCTCTTCACTGCGACGGTTCCTTCTCACCACCGTTTCGTCTCTCCATCCCAACATCCGAAACAGAGTCTTCTATCGCAGTCGCTAAGCGTCACATTCACGGAGAATCCACAACCAACGGCGGTGGTCACATTGCAGGAGCAGCAATTGACGGATTGGATTACTTCTCCGGTGACGCGACGGTTCGGAATCGGCGCCGGGTTTACCTGGGCTGGGTTTTTAGCTTTCGGTGTTGTCTCCGAGCAGATGAAGAAGTCACGACTCGATGTGTTTCAGGAAGAGGATAACACAAGAGGTTTAGAAAAGCAAGAAGAGATCATCTTACCAAACGGCATAAGGTACTATGATCTACAAGTTGGAAGTGGAGCTACTCCAAGCTCAGGATACTTGGTAGTGTTTGATGTAAAGGGACAAGTACATGGCACTGAACAAGTGTTCGTGGACACATTTGGAGGCAAAGGCAAGTCACTAGCGATGGTAATGGACTCAAGACCGTATAGCAAGGGACTATGCCAAGGTATAGAGCATGTTCTCAGGTCAATGAAGGCTGGAGGTAAACGTAGAGTGATAATTCCACCGTCCTTAGGATTTGGAGACAGAAATGTCGAATTTGGACAGGGTTTGGAGATTCCTCCATCTGCAACACTTGACTATATCATCGAGGTTGATACAGTTTATTGTTTCCAAACTATTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0036211 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

234

Amino Acids

25.75

Weight (kDa)

6.21

Isoelectric Point (pI)

54.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	126 - 224	9.4e-16	FKBP-type peptidyl-prolyl cis-trans isomerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18170 AT1G73655
malus_domestica	MD06G1230600.v1.1 MD14G1235200.v1.1
prunus_persica	Prupe.5G231900_v2.0.a1
pyrus_communis	pycom06g20180 pycom14g19620 pycom17g14050
rosa_chinensis	RchiOBHm_Chr7g0178601
rosa_laevigata	RLG00000005433
rosa_multiflora	Rmu_co8510969.1_g000001 Rmu_sc0002320.1_g000004
rosa_roxburghii	Rroxscaffold_3G00274770
rosa_rugosa	Rorug06G0418300
rosa_samantha	Rh7AG017000 Rh7BG016500 Rh7CG017200 Rh7DG017100
rosa_wichuraiana	Rw7G001370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	608
AccB1I	GGYRCC	1 cut(s)	200
AccII	CGCG	1 cut(s)	184
AciI	CCGC	1 cut(s)	128
AcsI	RAATTY	1 cut(s)	614
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	2 cut(s)	347, 423
AfiI	CCNNNNNNNGG	3 cut(s)	219, 386, 590
AjnI	CCWGG	1 cut(s)	212
AluBI	AGCT	3 cut(s)	230, 374, 384
AluI	AGCT	3 cut(s)	230, 374, 384
Alw26I	GTCTC	3 cut(s)	52, 247, 594
ApeKI	GCWGC	1 cut(s)	148
ApoI	RAATTY	1 cut(s)	614
AspLEI	GCGC	1 cut(s)	203
AsuC2I	CCSGG	1 cut(s)	205
AsuHPI	GGTGA	2 cut(s)	26, 190
AxyI	CCTNAGG	1 cut(s)	589
BanI	GGYRCC	1 cut(s)	200
BarI	GAAGNNNNNNTAC	2 cut(s)	358, 390
BbsI	GAAGAC	1 cut(s)	68
BbvI	GCAGC	1 cut(s)	160
BccI	CCATC	3 cut(s)	61, 475, 649
BceAI	ACGGC	2 cut(s)	141, 352
BciT130I	CCWGG	1 cut(s)	214
BciVI	GTATCC	1 cut(s)	383
BcnI	CCSGG	1 cut(s)	205
BcoDI	GTCTC	3 cut(s)	52, 247, 594
BfaI	CTAG	1 cut(s)	476
BfoI	RGCGCY	1 cut(s)	204
BfuI	GTATCC	1 cut(s)	383
BisI	GCNGC	1 cut(s)	149
BlpI	GCTNAGC	1 cut(s)	92
BlsI	GCNGC	1 cut(s)	150
Bme1390I	CCNGG	2 cut(s)	205, 214
BmiI	GGNNCC	2 cut(s)	27, 202
BmrFI	CCNGG	2 cut(s)	205, 214
BpiI	GAAGAC	1 cut(s)	68
BpmI	CTGGAG	1 cut(s)	576
Bpu10I	CCTNAGC	1 cut(s)	385
Bpu1102I	GCTNAGC	1 cut(s)	92
BpuEI	CTTGAG	1 cut(s)	478
BpuMI	CCSGG	1 cut(s)	205
BsaHI	GRCGYC	1 cut(s)	201
BsaJI	CCNNGG	2 cut(s)	213, 520
BsaWI	WCCGGW	1 cut(s)	175
Bsc4I	CCNNNNNNNGG	3 cut(s)	219, 386, 590
Bse21I	CCTNAGG	1 cut(s)	589
Bse3DI	GCAATG	1 cut(s)	137
BseBI	CCWGG	1 cut(s)	214
BseDI	CCNNGG	2 cut(s)	213, 520
BseGI	GGATG	2 cut(s)	53, 61
BseLI	CCNNNNNNNGG	3 cut(s)	219, 386, 590
BseMI	GCAATG	1 cut(s)	137
BseMII	CTCAG	2 cut(s)	399, 553
BseXI	GCAGC	1 cut(s)	160
BseYI	CCCAGC	1 cut(s)	218
Bsh1236I	CGCG	1 cut(s)	184
BshNI	GGYRCC	1 cut(s)	200
BsiSI	CCGG	2 cut(s)	176, 204
BslFI	GGGAC	2 cut(s)	429, 525
BslI	CCNNNNNNNGG	3 cut(s)	219, 386, 590
BsmAI	GTCTC	3 cut(s)	52, 247, 594
BsmBI	CGTCTC	1 cut(s)	52
BsmFI	GGGAC	2 cut(s)	429, 525
Bsp143I	GATC	2 cut(s)	321, 352
Bsp1720I	GCTNAGC	1 cut(s)	92
BspACI	CCGC	1 cut(s)	128
BspCNI	CTCAG	2 cut(s)	398, 552
BspFNI	CGCG	1 cut(s)	184
BspLI	GGNNCC	2 cut(s)	27, 202
BspT107I	GGYRCC	1 cut(s)	200
BsrDI	GCAATG	1 cut(s)	137
BssECI	CCNNGG	2 cut(s)	213, 520
BssMI	GATC	2 cut(s)	321, 352
BssNI	GRCGYC	1 cut(s)	201
BssT1I	CCWWGG	1 cut(s)	520
Bst2UI	CCWGG	1 cut(s)	214
Bst4CI	ACNGT	6 cut(s)	25, 41, 189, 501, 585, 679
Bst6I	CTCTTC	3 cut(s)	17, 279, 312
BstACI	GRCGYC	1 cut(s)	201
BstDEI	CTNAG	4 cut(s)	92, 385, 539, 589
BstF5I	GGATG	2 cut(s)	53, 61
BstFNI	CGCG	1 cut(s)	184
BstH2I	RGCGCY	1 cut(s)	204
BstHHI	GCGC	1 cut(s)	203
BstKTI	GATC	2 cut(s)	324, 355
BstMAI	GTCTC	3 cut(s)	52, 247, 594
BstMBI	GATC	2 cut(s)	321, 352
BstMWI	GCNNNNNNNGC	1 cut(s)	148
BstNI	CCWGG	1 cut(s)	214
BstNSI	RCATGY	1 cut(s)	536
BstSCI	CCNGG	2 cut(s)	203, 212
BstUI	CGCG	1 cut(s)	184
BstV1I	GCAGC	1 cut(s)	160
BstV2I	GAAGAC	1 cut(s)	68
Bsu36I	CCTNAGG	1 cut(s)	589
BsuI	GTATCC	1 cut(s)	383
BtgZI	GCGATG	1 cut(s)	494
BtsCI	GGATG	2 cut(s)	53, 61
BtsI	GCAGTG	1 cut(s)	15
BtsIMutI	CAGTG	2 cut(s)	15, 429
CfoI	GCGC	1 cut(s)	203
CseI	GACGC	2 cut(s)	85, 190
Csp6I	GTAC	2 cut(s)	346, 422
CspCI	CAANNNNNGTGG	2 cut(s)	111, 146
CviAII	CATG	2 cut(s)	425, 533
CviJI	RGCY	5 cut(s)	218, 230, 374, 384, 554
CviKI_1	RGCY	5 cut(s)	218, 230, 374, 384, 554
CviQI	GTAC	2 cut(s)	346, 422
DdeI	CTNAG	4 cut(s)	92, 385, 539, 589
DinI	GGCGCC	1 cut(s)	202
DpnI	GATC	2 cut(s)	323, 354
DpnII	GATC	2 cut(s)	321, 352
DrdI	GACNNNNNNGTC	1 cut(s)	608
DseDI	GACNNNNNNGTC	1 cut(s)	608
Eam1104I	CTCTTC	3 cut(s)	17, 279, 312
EarI	CTCTTC	3 cut(s)	17, 279, 312
Eco130I	CCWWGG	1 cut(s)	520
Eco81I	CCTNAGG	1 cut(s)	589
EcoRII	CCWGG	1 cut(s)	212
EcoT14I	CCWWGG	1 cut(s)	520
EgeI	GGCGCC	1 cut(s)	202
EheI	GGCGCC	1 cut(s)	202
ErhI	CCWWGG	1 cut(s)	520
Esp3I	CGTCTC	1 cut(s)	52
FaeI	CATG	2 cut(s)	428, 536
FaiI	YATR	9 cut(s)	341, 351, 426, 504, 517, 527, 534, 660, 703
FaqI	GGGAC	2 cut(s)	429, 525
FatI	CATG	2 cut(s)	424, 532
Fnu4HI	GCNGC	1 cut(s)	149
FokI	GGATG	2 cut(s)	40, 48
Fsp4HI	GCNGC	1 cut(s)	149
FspBI	CTAG	1 cut(s)	476
GlaI	GCGC	1 cut(s)	202
GluI	GCNGC	1 cut(s)	149
GsaI	CCCAGC	1 cut(s)	222
GsuI	CTGGAG	1 cut(s)	576
HaeII	RGCGCY	1 cut(s)	204
HapII	CCGG	2 cut(s)	176, 204
HgaI	GACGC	2 cut(s)	85, 190
HhaI	GCGC	1 cut(s)	203
Hin1I	GRCGYC	1 cut(s)	201
Hin1II	CATG	2 cut(s)	428, 536
Hin6I	GCGC	1 cut(s)	201
HinP1I	GCGC	1 cut(s)	201
HinfI	GANTC	7 cut(s)	7, 73, 112, 195, 267, 491, 634
HpaII	CCGG	2 cut(s)	176, 204
HphI	GGTGA	2 cut(s)	26, 190
Hpy166II	GTNNAC	3 cut(s)	210, 448, 563
Hpy188I	TCNGA	3 cut(s)	66, 194, 247
Hpy188III	TCNNGA	4 cut(s)	264, 281, 387, 495
Hpy8I	GTNNAC	3 cut(s)	210, 448, 563
Hpy99I	CGWCG	2 cut(s)	25, 189
HpyAV	CCTTC	2 cut(s)	39, 544
HpyCH4III	ACNGT	6 cut(s)	25, 41, 189, 501, 585, 679
HpyCH4IV	ACGT	1 cut(s)	565
HpyCH4V	TGCA	2 cut(s)	142, 647
HpyF10VI	GCNNNNNNNGC	1 cut(s)	148
HpyF3I	CTNAG	4 cut(s)	92, 385, 539, 589
HpySE526I	ACGT	1 cut(s)	565
Hsp92I	GRCGYC	1 cut(s)	201
Hsp92II	CATG	2 cut(s)	428, 536
HspAI	GCGC	1 cut(s)	201
KasI	GGCGCC	1 cut(s)	200
Kzo9I	GATC	2 cut(s)	321, 352
LmnI	GCTCC	2 cut(s)	145, 371
Lsp1109I	GCAGC	1 cut(s)	160
MaeI	CTAG	1 cut(s)	476
MaeII	ACGT	1 cut(s)	565
MaeIII	GTNAC	5 cut(s)	97, 133, 178, 261, 471
MalI	GATC	2 cut(s)	323, 354
MboI	GATC	2 cut(s)	321, 352
MboII	GAAGA	5 cut(s)	4, 68, 268, 296, 329
MfeI	CAATTG	1 cut(s)	152
MluCI	AATT	3 cut(s)	152, 576, 614
Mly113I	GGCGCC	1 cut(s)	201
MlyI	GAGTC	3 cut(s)	82, 261, 485
MmeI	TCCRAC	1 cut(s)	343
MnlI	CCTC	6 cut(s)	280, 293, 452, 551, 648, 661
MspI	CCGG	2 cut(s)	176, 204
MspR9I	CCNGG	2 cut(s)	205, 214
MunI	CAATTG	1 cut(s)	152
MvaI	CCWGG	1 cut(s)	214
MvnI	CGCG	1 cut(s)	184
MwoI	GCNNNNNNNGC	1 cut(s)	148
NarI	GGCGCC	1 cut(s)	201
NciI	CCSGG	1 cut(s)	205
NdeII	GATC	2 cut(s)	321, 352
NlaIII	CATG	2 cut(s)	428, 536
NlaIV	GGNNCC	2 cut(s)	27, 202
NmuCI	GTSAC	5 cut(s)	97, 133, 178, 261, 471
NspI	RCATGY	1 cut(s)	536
PfeI	GAWTC	3 cut(s)	112, 195, 634
PkrI	GCNGC	1 cut(s)	150
PleI	GAGTC	3 cut(s)	81, 261, 485
PluTI	GGCGCC	1 cut(s)	204
PpsI	GAGTC	3 cut(s)	81, 261, 485
Psp6I	CCWGG	1 cut(s)	212
PspFI	CCCAGC	1 cut(s)	218
PspGI	CCWGG	1 cut(s)	212
PspN4I	GGNNCC	2 cut(s)	27, 202
RsaI	GTAC	2 cut(s)	347, 423
RsaNI	GTAC	2 cut(s)	346, 422
SatI	GCNGC	1 cut(s)	149
Sau3AI	GATC	2 cut(s)	321, 352
SchI	GAGTC	3 cut(s)	82, 261, 485
ScrFI	CCNGG	2 cut(s)	205, 214
SfoI	GGCGCC	1 cut(s)	202
SmlI	CTYRAG	1 cut(s)	493
SmoI	CTYRAG	1 cut(s)	493
Sse9I	AATT	3 cut(s)	152, 576, 614
SsiI	CCGC	1 cut(s)	128
SspDI	GGCGCC	1 cut(s)	200
SspMI	CTAG	1 cut(s)	476
StyD4I	CCNGG	2 cut(s)	203, 212
StyI	CCWWGG	1 cut(s)	520
TaaI	ACNGT	6 cut(s)	25, 41, 189, 501, 585, 679
TaiI	ACGT	1 cut(s)	568
TaqI	TCGA	3 cut(s)	270, 612, 666
TasI	AATT	3 cut(s)	152, 576, 614
TatI	WGTACW	1 cut(s)	421
TfiI	GAWTC	3 cut(s)	112, 195, 634
TscAI	CASTG	2 cut(s)	22, 436
TseFI	GTSAC	5 cut(s)	97, 133, 178, 261, 471
TseI	GCWGC	1 cut(s)	148
Tsp45I	GTSAC	5 cut(s)	97, 133, 178, 261, 471
TspDTI	ATGAA	2 cut(s)	269, 563
TspGWI	ACGGA	2 cut(s)	122, 173
TspRI	CASTG	2 cut(s)	22, 436
XapI	RAATTY	1 cut(s)	614
XceI	RCATGY	1 cut(s)	536
XspI	CTAG	1 cut(s)	476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.