Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011742

Physical Location & Seq

Genomic Coordinates Forward (+)

17671337 .. 17672849

Gene Structure 1513 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G231900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 810 bp

ATGGCCACCTTCTCTGGTTCTTCCCCATTTCTCTCCCACTCCCTAACAAGACCAAGCCACTTTTCTTCTTCTTCTTCATCATCACAAACGCCTCCTCCTGTTCCTCCACAAAATCTGCCTTCACAACCACATTCTCCAACACCAATTCAGCAGCTCAGCACAGCTTCATCGGAGCAGCCGAAAACGCCAGTCTCAGTAAAAGCAGAGCAACAGAAAGCTGCCTCTTCTAGCAGCACCACCAAGAGCACCAAGACCAAGGCTGACTCTACAGATTGGATAGCTTCCACGTTAACCAGGCGGTTTGGGATTGGAGCTGGCCTTGCCTGGGCTGCCTTTCTCACAGTGGGCGTGGTCTCTGAACAAATTAAGACCCGCCTTGAAGTCTCCCAACAAGAATCAAACACAAGAAATGTTGAGAAAGAAGAAGAGGTGGTGCTACCTAATGGCATAAGATACTACGAGTTAAGAGTTGGTGGGGGGGCTTCTCCAAGGGCAGGAGACTTGGTGGTGATCGAGCTCAAGGGGAAAGTGGAAGGCAGTGGACAAGTGTTTGTGGATACATTTGAGAGAGAGAAGAAGCCTTTGGCTCTGGTAGTTGGGTCCAGGCAGCCCTACAGCAAGGGAGTGTGTGAAGGGATAGAATATGTGCTCAGATCCATGAAGGCAGGGGGCAAAAGAAGAGTGCTTGTTCCTCCAAGCTTGGGCTTCGGTGAGAATGGTGCAGACTTAGGTCCTGGTCTGCAAATTCCTTCGTTTGCAACTCTAGACTACATTATTGAGGTCGATAGAGTCTCTATTGCACCCGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0036211 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

270

Amino Acids

28.64

Weight (kDa)

9.14

Isoelectric Point (pI)

58.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18170 AT1G73655
malus_domestica	MD06G1230600.v1.1 MD14G1235200.v1.1
prunus_persica	Prupe.5G231900_v2.0.a1
pyrus_communis	pycom06g20180 pycom14g19620 pycom17g14050
rosa_chinensis	RchiOBHm_Chr7g0178601
rosa_laevigata	RLG00000005433
rosa_multiflora	Rmu_co8510969.1_g000001 Rmu_sc0002320.1_g000004
rosa_roxburghii	Rroxscaffold_3G00274770
rosa_rugosa	Rorug06G0418300
rosa_samantha	Rh7AG017000 Rh7BG016500 Rh7CG017200 Rh7DG017100
rosa_wichuraiana	Rw7G001370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	298, 373, 804
AclWI	GGATC	1 cut(s)	648
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	744
AfiI	CCNNNNNNNGG	3 cut(s)	325, 494, 701
AgsI	TTSAA	1 cut(s)	380
AjnI	CCWGG	4 cut(s)	293, 323, 602, 733
AjuI	GAANNNNNNNTTGG	4 cut(s)	46, 78, 566, 598
AluBI	AGCT	7 cut(s)	154, 164, 218, 281, 314, 517, 699
AluI	AGCT	7 cut(s)	154, 164, 218, 281, 314, 517, 699
Alw21I	GWGCWC	3 cut(s)	248, 519, 651
Alw26I	GTCTC	5 cut(s)	196, 358, 388, 492, 796
AlwI	GGATC	1 cut(s)	648
AoxI	GGCC	2 cut(s)	3, 316
ApeKI	GCWGC	6 cut(s)	151, 175, 218, 231, 329, 607
ApoI	RAATTY	1 cut(s)	744
AspS9I	GGNCC	2 cut(s)	600, 731
AsuHPI	GGTGA	2 cut(s)	520, 722
AvaII	GGWCC	2 cut(s)	600, 731
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	519
Bbv12I	GWGCWC	3 cut(s)	248, 519, 651
BbvI	GCAGC	6 cut(s)	163, 187, 205, 243, 316, 619
BciT130I	CCWGG	4 cut(s)	295, 325, 604, 735
BciVI	GTATCC	1 cut(s)	550
BcoDI	GTCTC	5 cut(s)	196, 358, 388, 492, 796
BfaI	CTAG	2 cut(s)	228, 764
BfmI	CTRYAG	2 cut(s)	267, 613
BfuI	GTATCC	1 cut(s)	550
BisI	GCNGC	6 cut(s)	152, 176, 219, 232, 330, 608
BlpI	GCTNAGC	1 cut(s)	155
BlsI	GCNGC	6 cut(s)	153, 177, 220, 233, 331, 609
Bme1390I	CCNGG	4 cut(s)	295, 325, 604, 735
Bme18I	GGWCC	2 cut(s)	600, 731
BmgT120I	GGNCC	2 cut(s)	600, 731
BmiI	GGNNCC	1 cut(s)	601
BmrFI	CCNGG	4 cut(s)	295, 325, 604, 735
BoxI	GACNNNNGTC	1 cut(s)	729
Bpu1102I	GCTNAGC	1 cut(s)	155
BpuEI	CTTGAG	1 cut(s)	503
BsaI	GGTCTC	1 cut(s)	358
BsaJI	CCNNGG	3 cut(s)	255, 324, 488
BsaXI	ACNNNNNCTCC	4 cut(s)	79, 109, 489, 519
Bsc4I	CCNNNNNNNGG	3 cut(s)	325, 494, 701
Bse1I	ACTGG	1 cut(s)	188
BseBI	CCWGG	4 cut(s)	295, 325, 604, 735
BseDI	CCNNGG	3 cut(s)	255, 324, 488
BseLI	CCNNNNNNNGG	3 cut(s)	325, 494, 701
BseMII	CTCAG	3 cut(s)	169, 207, 664
BseNI	ACTGG	1 cut(s)	188
BseRI	GAGGAG	1 cut(s)	84
BseXI	GCAGC	6 cut(s)	163, 187, 205, 243, 316, 619
BsgI	GTGCAG	1 cut(s)	741
BshFI	GGCC	2 cut(s)	5, 318
BsiHKAI	GWGCWC	3 cut(s)	248, 519, 651
BslI	CCNNNNNNNGG	3 cut(s)	325, 494, 701
BsmAI	GTCTC	5 cut(s)	196, 358, 388, 492, 796
BsnI	GGCC	2 cut(s)	5, 318
Bso31I	GGTCTC	1 cut(s)	358
Bsp1286I	GDGCHC	3 cut(s)	248, 519, 651
Bsp143I	GATC	2 cut(s)	510, 653
Bsp1720I	GCTNAGC	1 cut(s)	155
BspACI	CCGC	3 cut(s)	298, 373, 804
BspANI	GGCC	2 cut(s)	5, 318
BspCNI	CTCAG	3 cut(s)	168, 206, 663
BspLI	GGNNCC	1 cut(s)	601
BspPI	GGATC	1 cut(s)	648
BspTNI	GGTCTC	1 cut(s)	358
BsrI	ACTGG	1 cut(s)	188
BssECI	CCNNGG	3 cut(s)	255, 324, 488
BssMI	GATC	2 cut(s)	510, 653
BssT1I	CCWWGG	2 cut(s)	255, 488
Bst2UI	CCWGG	4 cut(s)	295, 325, 604, 735
Bst4CI	ACNGT	1 cut(s)	343
Bst6I	CTCTTC	3 cut(s)	229, 420, 673
BstC8I	GCNNGC	1 cut(s)	316
BstDEI	CTNAG	4 cut(s)	155, 193, 650, 727
BstKTI	GATC	2 cut(s)	513, 656
BstMAI	GTCTC	5 cut(s)	196, 358, 388, 492, 796
BstMBI	GATC	2 cut(s)	510, 653
BstMWI	GCNNNNNNNGC	3 cut(s)	184, 320, 329
BstNI	CCWGG	4 cut(s)	295, 325, 604, 735
BstPAI	GACNNNNGTC	1 cut(s)	729
BstSCI	CCNGG	4 cut(s)	293, 323, 602, 733
BstSFI	CTRYAG	2 cut(s)	267, 613
BstV1I	GCAGC	6 cut(s)	163, 187, 205, 243, 316, 619
BstX2I	RGATCY	1 cut(s)	653
BstYI	RGATCY	1 cut(s)	653
BsuI	GTATCC	1 cut(s)	550
BsuRI	GGCC	2 cut(s)	5, 318
BtsI	GCAGTG	1 cut(s)	544
BtsIMutI	CAGTG	2 cut(s)	348, 544
Cac8I	GCNNGC	1 cut(s)	316
Cfr13I	GGNCC	2 cut(s)	600, 731
CviAII	CATG	2 cut(s)	658, 807
DdeI	CTNAG	4 cut(s)	155, 193, 650, 727
DpnI	GATC	2 cut(s)	512, 655
DpnII	GATC	2 cut(s)	510, 653
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	229, 420, 673
EarI	CTCTTC	3 cut(s)	229, 420, 673
Ecl136II	GAGCTC	1 cut(s)	517
Eco130I	CCWWGG	2 cut(s)	255, 488
Eco24I	GRGCYC	1 cut(s)	519
Eco31I	GGTCTC	1 cut(s)	358
Eco47I	GGWCC	2 cut(s)	600, 731
Eco53kI	GAGCTC	1 cut(s)	517
EcoICRI	GAGCTC	1 cut(s)	517
EcoO109I	RGGNCCY	1 cut(s)	731
EcoRII	CCWGG	4 cut(s)	293, 323, 602, 733
EcoT14I	CCWWGG	2 cut(s)	255, 488
EcoT38I	GRGCYC	1 cut(s)	519
ErhI	CCWWGG	2 cut(s)	255, 488
FaeI	CATG	2 cut(s)	661, 810
FaiI	YATR	4 cut(s)	449, 645, 659, 808
FatI	CATG	2 cut(s)	657, 806
FauI	CCCGC	1 cut(s)	380
Fnu4HI	GCNGC	6 cut(s)	152, 176, 219, 232, 330, 608
FriOI	GRGCYC	1 cut(s)	519
Fsp4HI	GCNGC	6 cut(s)	152, 176, 219, 232, 330, 608
FspBI	CTAG	2 cut(s)	228, 764
GluI	GCNGC	6 cut(s)	152, 176, 219, 232, 330, 608
HaeIII	GGCC	2 cut(s)	5, 318
Hin1II	CATG	2 cut(s)	661, 810
HincII	GTYRAC	1 cut(s)	291
HindII	GTYRAC	1 cut(s)	291
HindIII	AAGCTT	1 cut(s)	697
HinfI	GANTC	3 cut(s)	263, 395, 789
HpaI	GTTAAC	1 cut(s)	291
HphI	GGTGA	2 cut(s)	520, 722
Hpy166II	GTNNAC	2 cut(s)	291, 542
Hpy188I	TCNGA	3 cut(s)	172, 358, 653
Hpy188III	TCNNGA	1 cut(s)	764
Hpy8I	GTNNAC	2 cut(s)	291, 542
HpyAV	CCTTC	6 cut(s)	19, 129, 527, 626, 655, 759
HpyCH4III	ACNGT	1 cut(s)	343
HpyCH4IV	ACGT	1 cut(s)	287
HpyCH4V	TGCA	4 cut(s)	722, 742, 758, 800
HpyF10VI	GCNNNNNNNGC	3 cut(s)	184, 320, 329
HpyF3I	CTNAG	4 cut(s)	155, 193, 650, 727
HpySE526I	ACGT	1 cut(s)	287
Hsp92II	CATG	2 cut(s)	661, 810
KspAI	GTTAAC	1 cut(s)	291
Kzo9I	GATC	2 cut(s)	510, 653
LmnI	GCTCC	2 cut(s)	172, 311
Lsp1109I	GCAGC	6 cut(s)	163, 187, 205, 243, 316, 619
MaeI	CTAG	2 cut(s)	228, 764
MaeII	ACGT	1 cut(s)	287
MalI	GATC	2 cut(s)	512, 655
MboI	GATC	2 cut(s)	510, 653
MflI	RGATCY	1 cut(s)	653
MhlI	GDGCHC	3 cut(s)	248, 519, 651
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	144, 363, 744
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	257, 798
MmeI	TCCRAC	1 cut(s)	161
MnlI	CCTC	7 cut(s)	102, 105, 114, 232, 421, 702, 772
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	290, 366, 464
MslI	CAYNNNNRTG	1 cut(s)	805
Msp20I	TGGCCA	1 cut(s)	5
MspR9I	CCNGG	4 cut(s)	295, 325, 604, 735
MvaI	CCWGG	4 cut(s)	295, 325, 604, 735
MwoI	GCNNNNNNNGC	3 cut(s)	184, 320, 329
NdeII	GATC	2 cut(s)	510, 653
NlaIII	CATG	2 cut(s)	661, 810
NlaIV	GGNNCC	1 cut(s)	601
PcsI	WCGNNNNNNNCGW	1 cut(s)	176
PfeI	GAWTC	1 cut(s)	395
PkrI	GCNGC	6 cut(s)	153, 177, 220, 233, 331, 609
PleI	GAGTC	2 cut(s)	257, 797
PpsI	GAGTC	2 cut(s)	257, 797
PpuMI	RGGWCCY	1 cut(s)	731
PshAI	GACNNNNGTC	1 cut(s)	729
Psp124BI	GAGCTC	1 cut(s)	519
Psp5II	RGGWCCY	1 cut(s)	731
Psp6I	CCWGG	4 cut(s)	293, 323, 602, 733
PspGI	CCWGG	4 cut(s)	293, 323, 602, 733
PspN4I	GGNNCC	1 cut(s)	601
PspPI	GGNCC	2 cut(s)	600, 731
PspPPI	RGGWCCY	1 cut(s)	731
PsuI	RGATCY	1 cut(s)	653
RseI	CAYNNNNRTG	1 cut(s)	805
SacI	GAGCTC	1 cut(s)	519
SaqAI	TTAA	3 cut(s)	290, 366, 464
SatI	GCNGC	6 cut(s)	152, 176, 219, 232, 330, 608
Sau3AI	GATC	2 cut(s)	510, 653
Sau96I	GGNCC	2 cut(s)	600, 731
SchI	GAGTC	2 cut(s)	257, 798
ScrFI	CCNGG	4 cut(s)	295, 325, 604, 735
SduI	GDGCHC	3 cut(s)	248, 519, 651
SfcI	CTRYAG	2 cut(s)	267, 613
SinI	GGWCC	2 cut(s)	600, 731
SmiMI	CAYNNNNRTG	1 cut(s)	805
SmlI	CTYRAG	1 cut(s)	518
SmoI	CTYRAG	1 cut(s)	518
Sse9I	AATT	3 cut(s)	144, 363, 744
SsiI	CCGC	3 cut(s)	298, 373, 804
SspMI	CTAG	2 cut(s)	228, 764
SstI	GAGCTC	1 cut(s)	519
StyD4I	CCNGG	4 cut(s)	293, 323, 602, 733
StyI	CCWWGG	2 cut(s)	255, 488
TaaI	ACNGT	1 cut(s)	343
TaiI	ACGT	1 cut(s)	290
TaqI	TCGA	2 cut(s)	513, 783
TasI	AATT	3 cut(s)	144, 363, 744
TfiI	GAWTC	1 cut(s)	395
Tru1I	TTAA	3 cut(s)	290, 366, 464
Tru9I	TTAA	3 cut(s)	290, 366, 464
TscAI	CASTG	2 cut(s)	348, 544
TseI	GCWGC	6 cut(s)	151, 175, 218, 231, 329, 607
TspDTI	ATGAA	3 cut(s)	66, 156, 674
TspRI	CASTG	2 cut(s)	348, 544
VpaK11BI	GGWCC	2 cut(s)	600, 731
XapI	RAATTY	1 cut(s)	744
XbaI	TCTAGA	1 cut(s)	763
XspI	CTAG	2 cut(s)	228, 764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.