Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011742

Physical Location & Seq

Genomic Coordinates Forward (+)

55729581 .. 55731012

Gene Structure 1432 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0418300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGTGGTGCTCAAAGGAAAACTTGCCGTCCCCACAAACCATTCTCTCGGTGGCGGCCTCCGTCGCCGCCTCAGCCGTTCTCATCAAAAGTGTCGCAAACGACCTCGTCCCCGATGCCATCCACTCCTTCTTCTCCACCCGCATCAAAAAGCTGTCGTCCCAACTCACCGTCGTCGTCGACGAGTTTGACGGCCTCACCCCCAACCAGATGTTCGAGGCCGCCAACGTCTACTTGGGCACCAAGCTCTCTTTCTCAACGCAGAGAATCAAGGTCAACAAACCCGAAAAGGAGAAGCAGCTGCAGGTCAATATAGACAGGAACCAAGAGCTCGTTGATTGTTTCAATGGTGTGAAACTCAAGTGGGTTTTGGTGACGGAAAAGCCACCGGCGTCAGCTAACAACAACCGTGACCAGGTCTCGGAGGTTCGACACTTCGAGATCATTTTCCATAAGAAGCATAGGGACATGGTGCTCAGCTCTTACTTGCCCTATGTGTTAAAGAAGCATAGAGAAATCAAGGAGGAGAGAAAGGTGGTGAAGCTTCATACCGTTGATTACAATGGCACTGACTATTGGGGCTCCATAAACCTTGACCACCCTGCGAATTTCGATACCATGGCAATGGAGCCGGAGATGAAGAAGACATTGATTGAGGACCTAGATAGGTTTAGGGAGAGGAAGGAGTACTATAAGAGAGTAGGGAAGGCATGGAAACGTGGGTATTTGCTGTACGGACCACCCGGCACTGGAAAATCAAGCTTGGTTGCAGCCATGGCTAATTATCTGAAGTTTGATATTTTTGACTTGGATTTGAAGGAGGTTCAATGCAATTCTGATTTGAGAAGGTTGCTGATCGGCACGAAAAGTAGATCGATATTGGTGATCGAGGATATTGATTGCTCGGTTGAGTTGCAGAACAGAGACTCAGATCAAAATGAACCCAAAACTGTTGAGGATGATAAGGTGAGCCTCTCTGGTCTACTAAACTTCATTGATGGGTTGTGGTCAAGCTGTGGAGAGGAGAGAATCATTGTGTTCACGACGAATCACAAGGACCGACTTGATCAGGCCTTGCTCCGACCTGGTCGGATGGACTTGCACCTGCATATGTCCTACTGCACCTTCAGTGGCTTCAAGACATTAGCTTACAATTACTTGCAGATTAAAGAGCACCCACTTTTTGCAGACATTGAAGCATTATTGCTAAATCACAAGTTAGTTACACCTGCTGAAGTTGCTGGAGAGCTAATGAAGAGTGATGATGCTCGAGTCTCCCTTCAAGGTCTTGTCGAATTCCTCCAAAGCAAGAACATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0036211 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

438

Amino Acids

50.04

Weight (kDa)

6.88

Isoelectric Point (pI)

35.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	38 - 124	2.7e-23	Domain associated at C-terminal with AAA
AAA	PF00004	241 - 371	8e-20	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	373 - 436	2.3e-20	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18170 AT1G73655
malus_domestica	MD06G1230600.v1.1 MD14G1235200.v1.1
prunus_persica	Prupe.5G231900_v2.0.a1
pyrus_communis	pycom06g20180 pycom14g19620 pycom17g14050
rosa_chinensis	RchiOBHm_Chr7g0178601
rosa_laevigata	RLG00000005433
rosa_multiflora	Rmu_co8510969.1_g000001 Rmu_sc0002320.1_g000004
rosa_roxburghii	Rroxscaffold_3G00274770
rosa_rugosa	Rorug06G0418300
rosa_samantha	Rh7AG017000 Rh7BG016500 Rh7CG017200 Rh7DG017100
rosa_wichuraiana	Rw7G001370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1110, 1234
Acc36I	ACCTGC	3 cut(s)	292, 1110, 1234
AccB1I	GGYRCC	1 cut(s)	236
AccI	GTMKAC	3 cut(s)	177, 228, 979
AciI	CCGC	4 cut(s)	53, 66, 139, 219
AcsI	RAATTY	2 cut(s)	604, 1292
AcuI	CTGAAG	3 cut(s)	806, 1108, 1251
AcyI	GRCGYC	1 cut(s)	389
AfaI	GTAC	2 cut(s)	686, 731
AfiI	CCNNNNNNNGG	3 cut(s)	412, 418, 746
AgsI	TTSAA	6 cut(s)	343, 814, 824, 1135, 1193, 1280
AjnI	CCWGG	2 cut(s)	411, 1081
AjuI	GAANNNNNNNTTGG	4 cut(s)	194, 226, 233, 265
Alw21I	GWGCWC	4 cut(s)	11, 330, 474, 1173
Alw26I	GTCTC	3 cut(s)	421, 915, 1276
Ama87I	CYCGRG	1 cut(s)	1266
AoxI	GGCC	4 cut(s)	54, 190, 216, 1068
ApeKI	GCWGC	3 cut(s)	295, 298, 767
ApoI	RAATTY	2 cut(s)	604, 1292
AspS9I	GGNCC	3 cut(s)	655, 734, 1054
AsuC2I	CCSGG	1 cut(s)	741
AsuHPI	GGTGA	6 cut(s)	157, 187, 382, 547, 892, 976
AvaI	CYCGRG	1 cut(s)	1266
AvaII	GGWCC	3 cut(s)	655, 734, 1054
BaeGI	GKGCMC	1 cut(s)	239
BanI	GGYRCC	1 cut(s)	236
BanII	GRGCYC	2 cut(s)	330, 581
BbsI	GAAGAC	1 cut(s)	647
Bbv12I	GWGCWC	4 cut(s)	11, 330, 474, 1173
BbvCI	CCTCAGC	1 cut(s)	70
BbvI	GCAGC	3 cut(s)	285, 307, 779
BccI	CCATC	3 cut(s)	125, 989, 1084
BceAI	ACGGC	3 cut(s)	10, 59, 205
BciT130I	CCWGG	2 cut(s)	413, 1083
BclI	TGATCA	1 cut(s)	1063
BcnI	CCSGG	1 cut(s)	741
BcoDI	GTCTC	3 cut(s)	421, 915, 1276
BfaI	CTAG	2 cut(s)	659, 1315
BfmI	CTRYAG	1 cut(s)	299
BfuAI	ACCTGC	3 cut(s)	292, 1110, 1234
BisI	GCNGC	6 cut(s)	54, 66, 219, 296, 299, 768
BlpI	GCTNAGC	1 cut(s)	473
BlsI	GCNGC	6 cut(s)	55, 67, 220, 297, 300, 769
BmcAI	AGTACT	1 cut(s)	686
Bme1390I	CCNGG	3 cut(s)	413, 741, 1083
Bme18I	GGWCC	3 cut(s)	655, 734, 1054
BmeT110I	CYCGRG	1 cut(s)	1266
BmgT120I	GGNCC	3 cut(s)	655, 734, 1054
BmiI	GGNNCC	4 cut(s)	238, 320, 580, 627
BmrFI	CCNGG	3 cut(s)	413, 741, 1083
BmsI	GCATC	3 cut(s)	103, 150, 1252
BpiI	GAAGAC	1 cut(s)	647
BpmI	CTGGAG	1 cut(s)	1260
Bpu10I	CCTNAGC	1 cut(s)	70
Bpu1102I	GCTNAGC	1 cut(s)	473
BpuEI	CTTGAG	1 cut(s)	341
BpuMI	CCSGG	1 cut(s)	741
Bsa29I	ATCGAT	1 cut(s)	872
BsaHI	GRCGYC	1 cut(s)	389
BsaI	GGTCTC	1 cut(s)	421
BsaJI	CCNNGG	2 cut(s)	615, 771
Bsc4I	CCNNNNNNNGG	3 cut(s)	412, 418, 746
Bse118I	RCCGGY	1 cut(s)	385
Bse1I	ACTGG	1 cut(s)	751
Bse3DI	GCAATG	1 cut(s)	627
BseBI	CCWGG	2 cut(s)	413, 1083
BseCI	ATCGAT	1 cut(s)	872
BseDI	CCNNGG	2 cut(s)	615, 771
BseGI	GGATG	3 cut(s)	117, 961, 1095
BseLI	CCNNNNNNNGG	3 cut(s)	412, 418, 746
BseMI	GCAATG	1 cut(s)	627
BseMII	CTCAG	3 cut(s)	84, 487, 939
BseNI	ACTGG	1 cut(s)	751
BseRI	GAGGAG	2 cut(s)	536, 1034
BseSI	GKGCMC	1 cut(s)	239
BseXI	GCAGC	3 cut(s)	285, 307, 779
BsgI	GTGCAG	1 cut(s)	1102
BshFI	GGCC	4 cut(s)	56, 192, 218, 1070
BshNI	GGYRCC	1 cut(s)	236
BshVI	ATCGAT	1 cut(s)	872
BsiHKAI	GWGCWC	4 cut(s)	11, 330, 474, 1173
BsiHKCI	CYCGRG	1 cut(s)	1266
BsiSI	CCGG	3 cut(s)	386, 629, 741
BslFI	GGGAC	4 cut(s)	13, 92, 142, 476
BslI	CCNNNNNNNGG	3 cut(s)	412, 418, 746
BsmAI	GTCTC	3 cut(s)	421, 915, 1276
BsmFI	GGGAC	4 cut(s)	13, 92, 142, 476
BsnI	GGCC	4 cut(s)	56, 192, 218, 1070
Bso31I	GGTCTC	1 cut(s)	421
BsoBI	CYCGRG	1 cut(s)	1266
Bsp1286I	GDGCHC	6 cut(s)	11, 239, 330, 474, 581, 1173
Bsp143I	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
Bsp1720I	GCTNAGC	1 cut(s)	473
Bsp19I	CCATGG	2 cut(s)	615, 771
BspACI	CCGC	4 cut(s)	53, 66, 139, 219
BspANI	GGCC	4 cut(s)	56, 192, 218, 1070
BspCNI	CTCAG	3 cut(s)	83, 486, 938
BspDI	ATCGAT	1 cut(s)	872
BspLI	GGNNCC	4 cut(s)	238, 320, 580, 627
BspMAI	CTGCAG	1 cut(s)	303
BspMI	ACCTGC	3 cut(s)	292, 1110, 1234
BspT107I	GGYRCC	1 cut(s)	236
BspTNI	GGTCTC	1 cut(s)	421
BsrDI	GCAATG	1 cut(s)	627
BsrFI	RCCGGY	1 cut(s)	385
BsrI	ACTGG	1 cut(s)	751
BssAI	RCCGGY	1 cut(s)	385
BssECI	CCNNGG	2 cut(s)	615, 771
BssMI	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
BssNI	GRCGYC	1 cut(s)	389
BssT1I	CCWWGG	2 cut(s)	615, 771
Bst2UI	CCWGG	2 cut(s)	413, 1083
Bst4CI	ACNGT	4 cut(s)	169, 407, 550, 949
Bst6I	CTCTTC	1 cut(s)	1247
BstACI	GRCGYC	1 cut(s)	389
BstDEI	CTNAG	3 cut(s)	70, 473, 925
BstDSI	CCRYGG	2 cut(s)	615, 771
BstF5I	GGATG	3 cut(s)	117, 961, 1095
BstKTI	GATC	6 cut(s)	441, 855, 872, 885, 931, 1066
BstMAI	GTCTC	3 cut(s)	421, 915, 1276
BstMBI	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 71, 773, 1235
BstNI	CCWGG	2 cut(s)	413, 1083
BstSCI	CCNGG	3 cut(s)	411, 739, 1081
BstSFI	CTRYAG	1 cut(s)	299
BstSLI	GKGCMC	1 cut(s)	239
BstV1I	GCAGC	3 cut(s)	285, 307, 779
BstV2I	GAAGAC	1 cut(s)	647
BstXI	CCANNNNNNTGG	1 cut(s)	622
Bsu15I	ATCGAT	1 cut(s)	872
BsuRI	GGCC	4 cut(s)	56, 192, 218, 1070
BsuTUI	ATCGAT	1 cut(s)	872
BtgI	CCRYGG	2 cut(s)	615, 771
BtsCI	GGATG	3 cut(s)	117, 961, 1095
BtsIMutI	CAGTG	3 cut(s)	564, 744, 1132
BveI	ACCTGC	3 cut(s)	292, 1110, 1234
Cfr10I	RCCGGY	1 cut(s)	385
Cfr13I	GGNCC	3 cut(s)	655, 734, 1054
ClaI	ATCGAT	1 cut(s)	872
CseI	GACGC	1 cut(s)	378
CsiI	ACCWGGT	2 cut(s)	411, 1081
Csp6I	GTAC	2 cut(s)	685, 730
CviAII	CATG	4 cut(s)	466, 616, 708, 772
CviQI	GTAC	2 cut(s)	685, 730
DdeI	CTNAG	3 cut(s)	70, 473, 925
DpnI	GATC	6 cut(s)	440, 854, 871, 884, 930, 1065
DpnII	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
Eam1104I	CTCTTC	1 cut(s)	1247
EarI	CTCTTC	1 cut(s)	1247
Ecl136II	GAGCTC	1 cut(s)	328
Eco130I	CCWWGG	2 cut(s)	615, 771
Eco147I	AGGCCT	1 cut(s)	1070
Eco24I	GRGCYC	2 cut(s)	330, 581
Eco31I	GGTCTC	1 cut(s)	421
Eco47I	GGWCC	3 cut(s)	655, 734, 1054
Eco53kI	GAGCTC	1 cut(s)	328
Eco57I	CTGAAG	3 cut(s)	806, 1108, 1251
Eco88I	CYCGRG	1 cut(s)	1266
EcoICRI	GAGCTC	1 cut(s)	328
EcoO109I	RGGNCCY	1 cut(s)	655
EcoRI	GAATTC	1 cut(s)	1292
EcoRII	CCWGG	2 cut(s)	411, 1081
EcoT14I	CCWWGG	2 cut(s)	615, 771
EcoT38I	GRGCYC	2 cut(s)	330, 581
ErhI	CCWWGG	2 cut(s)	615, 771
FaeI	CATG	4 cut(s)	469, 619, 711, 775
FalI	AAGNNNNNCTT	1 cut(s)	37
FaqI	GGGAC	4 cut(s)	13, 92, 142, 476
FatI	CATG	4 cut(s)	465, 615, 707, 771
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	1 cut(s)	1107
FbaI	TGATCA	1 cut(s)	1063
FblI	GTMKAC	3 cut(s)	177, 228, 979
Fnu4HI	GCNGC	6 cut(s)	54, 66, 219, 296, 299, 768
FokI	GGATG	3 cut(s)	104, 968, 1102
FriOI	GRGCYC	2 cut(s)	330, 581
Fsp4HI	GCNGC	6 cut(s)	54, 66, 219, 296, 299, 768
FspBI	CTAG	2 cut(s)	659, 1315
GluI	GCNGC	6 cut(s)	54, 66, 219, 296, 299, 768
GsuI	CTGGAG	1 cut(s)	1260
HaeIII	GGCC	4 cut(s)	56, 192, 218, 1070
HapII	CCGG	3 cut(s)	386, 629, 741
HgaI	GACGC	1 cut(s)	378
Hin1I	GRCGYC	1 cut(s)	389
Hin1II	CATG	4 cut(s)	469, 619, 711, 775
HincII	GTYRAC	2 cut(s)	178, 274
HindII	GTYRAC	2 cut(s)	178, 274
HindIII	AAGCTT	2 cut(s)	539, 757
HinfI	GANTC	5 cut(s)	264, 923, 1026, 1045, 1269
HpaII	CCGG	3 cut(s)	386, 629, 741
HphI	GGTGA	6 cut(s)	157, 187, 382, 547, 892, 976
Hpy166II	GTNNAC	5 cut(s)	178, 229, 274, 980, 1038
Hpy188I	TCNGA	6 cut(s)	421, 786, 835, 928, 1079, 1089
Hpy188III	TCNNGA	3 cut(s)	436, 1039, 1135
Hpy8I	GTNNAC	5 cut(s)	178, 229, 274, 980, 1038
Hpy99I	CGWCG	6 cut(s)	65, 173, 176, 179, 182, 1045
HpyAV	CCTTC	7 cut(s)	136, 673, 697, 808, 837, 1132, 1286
HpyCH4III	ACNGT	4 cut(s)	169, 407, 550, 949
HpyCH4IV	ACGT	2 cut(s)	225, 715
HpyCH4V	TGCA	9 cut(s)	301, 767, 828, 913, 1099, 1105, 1119, 1159, 1184
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 71, 773, 1235
HpyF3I	CTNAG	3 cut(s)	70, 473, 925
HpySE526I	ACGT	2 cut(s)	225, 715
Hsp92I	GRCGYC	1 cut(s)	389
Hsp92II	CATG	4 cut(s)	469, 619, 711, 775
Ksp22I	TGATCA	1 cut(s)	1063
Kzo9I	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
LmnI	GCTCC	3 cut(s)	584, 625, 1080
Lsp1109I	GCAGC	3 cut(s)	285, 307, 779
LweI	GCATC	3 cut(s)	103, 150, 1252
MabI	ACCWGGT	2 cut(s)	411, 1081
MaeI	CTAG	2 cut(s)	659, 1315
MaeII	ACGT	2 cut(s)	225, 715
MaeIII	GTNAC	3 cut(s)	370, 407, 1219
MalI	GATC	6 cut(s)	440, 854, 871, 884, 930, 1065
MboI	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
MboII	GAAGA	4 cut(s)	121, 649, 652, 1264
MhlI	GDGCHC	6 cut(s)	11, 239, 330, 474, 581, 1173
MluCI	AATT	5 cut(s)	604, 778, 829, 1150, 1292
MlyI	GAGTC	2 cut(s)	917, 1278
MmeI	TCCRAC	2 cut(s)	1067, 1102
MseI	TTAA	2 cut(s)	497, 1164
MslI	CAYNNNNRTG	1 cut(s)	620
MspA1I	CMGCKG	1 cut(s)	298
MspI	CCGG	3 cut(s)	386, 629, 741
MspR9I	CCNGG	3 cut(s)	413, 741, 1083
MvaI	CCWGG	2 cut(s)	413, 1083
MwoI	GCNNNNNNNGC	4 cut(s)	62, 71, 773, 1235
NciI	CCSGG	1 cut(s)	741
NcoI	CCATGG	2 cut(s)	615, 771
NdeI	CATATG	1 cut(s)	1107
NdeII	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
NlaIII	CATG	4 cut(s)	469, 619, 711, 775
NlaIV	GGNNCC	4 cut(s)	238, 320, 580, 627
NmuCI	GTSAC	2 cut(s)	370, 407
PaeR7I	CTCGAG	1 cut(s)	1266
PaqCI	CACCTGC	2 cut(s)	1110, 1234
PceI	AGGCCT	1 cut(s)	1070
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PfeI	GAWTC	3 cut(s)	264, 1026, 1045
PflFI	GACNNNGTC	3 cut(s)	104, 413, 1083
PkrI	GCNGC	6 cut(s)	55, 67, 220, 297, 300, 769
PleI	GAGTC	2 cut(s)	917, 1277
PpsI	GAGTC	2 cut(s)	917, 1277
PpuMI	RGGWCCY	1 cut(s)	655
Psp124BI	GAGCTC	1 cut(s)	330
Psp5II	RGGWCCY	1 cut(s)	655
Psp6I	CCWGG	2 cut(s)	411, 1081
PspGI	CCWGG	2 cut(s)	411, 1081
PspN4I	GGNNCC	4 cut(s)	238, 320, 580, 627
PspPI	GGNCC	3 cut(s)	655, 734, 1054
PspPPI	RGGWCCY	1 cut(s)	655
PspXI	VCTCGAGB	1 cut(s)	1266
PstI	CTGCAG	1 cut(s)	303
PsyI	GACNNNGTC	3 cut(s)	104, 413, 1083
PvuII	CAGCTG	1 cut(s)	298
RsaI	GTAC	2 cut(s)	686, 731
RsaNI	GTAC	2 cut(s)	685, 730
RseI	CAYNNNNRTG	1 cut(s)	620
SacI	GAGCTC	1 cut(s)	330
SalI	GTCGAC	1 cut(s)	176
SaqAI	TTAA	2 cut(s)	497, 1164
SatI	GCNGC	6 cut(s)	54, 66, 219, 296, 299, 768
Sau3AI	GATC	6 cut(s)	438, 852, 869, 882, 928, 1063
Sau96I	GGNCC	3 cut(s)	655, 734, 1054
ScaI	AGTACT	1 cut(s)	686
SchI	GAGTC	2 cut(s)	917, 1278
ScrFI	CCNGG	3 cut(s)	413, 741, 1083
SduI	GDGCHC	6 cut(s)	11, 239, 330, 474, 581, 1173
SexAI	ACCWGGT	2 cut(s)	411, 1081
SfaNI	GCATC	3 cut(s)	103, 150, 1252
SfcI	CTRYAG	1 cut(s)	299
Sfr274I	CTCGAG	1 cut(s)	1266
SgrAI	CRCCGGYG	1 cut(s)	385
SgrDI	CGTCGACG	1 cut(s)	176
SinI	GGWCC	3 cut(s)	655, 734, 1054
SlaI	CTCGAG	1 cut(s)	1266
SmiMI	CAYNNNNRTG	1 cut(s)	620
SmlI	CTYRAG	2 cut(s)	356, 1266
SmoI	CTYRAG	2 cut(s)	356, 1266
Sse9I	AATT	5 cut(s)	604, 778, 829, 1150, 1292
SseBI	AGGCCT	1 cut(s)	1070
SsiI	CCGC	4 cut(s)	53, 66, 139, 219
SspMI	CTAG	2 cut(s)	659, 1315
SstI	GAGCTC	1 cut(s)	330
StuI	AGGCCT	1 cut(s)	1070
StyD4I	CCNGG	3 cut(s)	411, 739, 1081
StyI	CCWWGG	2 cut(s)	615, 771
TaaI	ACNGT	4 cut(s)	169, 407, 550, 949
TaiI	ACGT	2 cut(s)	228, 718
TaqI	TCGA	9 cut(s)	177, 213, 427, 435, 609, 872, 885, 1267, 1290
TaqII	GACCGA	1 cut(s)	1071
TasI	AATT	5 cut(s)	604, 778, 829, 1150, 1292
TatI	WGTACW	1 cut(s)	684
TauI	GCSGC	3 cut(s)	56, 68, 221
TfiI	GAWTC	3 cut(s)	264, 1026, 1045
Tru1I	TTAA	2 cut(s)	497, 1164
Tru9I	TTAA	2 cut(s)	497, 1164
TscAI	CASTG	3 cut(s)	571, 751, 1132
TseFI	GTSAC	2 cut(s)	370, 407
TseI	GCWGC	3 cut(s)	295, 298, 767
Tsp45I	GTSAC	2 cut(s)	370, 407
TspDTI	ATGAA	5 cut(s)	533, 650, 951, 979, 1265
TspGWI	ACGGA	3 cut(s)	49, 389, 747
TspRI	CASTG	3 cut(s)	571, 751, 1132
Tth111I	GACNNNGTC	3 cut(s)	104, 413, 1083
VpaK11BI	GGWCC	3 cut(s)	655, 734, 1054
XapI	RAATTY	2 cut(s)	604, 1292
XcmI	CCANNNNNNNNNTGG	2 cut(s)	46, 229
XhoI	CTCGAG	1 cut(s)	1266
XmiI	GTMKAC	3 cut(s)	177, 228, 979
XspI	CTAG	2 cut(s)	659, 1315
ZrmI	AGTACT	1 cut(s)	686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.