Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009771

Physical Location & Seq

Genomic Coordinates Reverse (-)

28720328 .. 28722550

Gene Structure 2223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G76540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 942 bp

ATGGACGAGGGAGTTATAGCAGTTTCCGCCATGGATGCTTTCGAGAAGCTTGAGAAAGTTGGTGAAGGGACATACGGGAAAGTTTACAGAGCCAGAGAGAAAGCTACCGGGAAAATCGTCGCTCTAAAGAAGACGCGTCTCCATGAGGACGAAGAAGGCGTTCCTTCCACCACTCTCCGCGAGATCTCCATTTTGCGAATGCTCGCTCGTGATCCTCACGTCGTCAGGTTAATGGATGTTAAGCAAGGACTAAGCAAAGAAGGCAAAACTGTACTGTACCTGGTTTTTGAATACATGGACACTGATGTCAAGAAATTCATCAGAAGTTTCCGTAGCACTGGCAAGAACATTCCAACCCAAACTATCAAGAGCTTGATGTATCAACTATGCAAAGGTATGGCATTCTGCCATGGTCACGGGATATTGCACAGAGATCTCAAGCCTCACAATCTCTTGATGGATCCCAAGACAATGAGGCTCAAAATAGCAGATCTTGGTTTAGCCAGAGCCTTCACTCTGCCAATGAAGAAGTATACCCATGAGATATTAACTCTTTGGTATAGAGCTCCAGAGGTTCTTCTTGGTGCCACCCATTACTCTACAGCTGTGGATATGTGGTCTGTTGGCTGCATATTTGCTGAACTTGTGACCAACCAAGCAATCTTTCAGGGAGACTCTGAGCTCCAACAGCTCCTCCATATTTTCAAGTTGTTTGGGACACCCAATGAAGAAATGTGGCCAGGAGTGAGCACACTCAAGAACTGGCATGAATACCCACAGTGGAAACCATCGACTCTATCCTCTGCTGTTCCAAACCTCGACGAGGCTGGAGTTGATCTTCTATCTAAAATGCTGCAGTACGAGCCAGCGAAACGAATCTCAGCAAAGATGGCTATGGAGCATCCTTACTTTGATGATCTGCCAGAAAAGTCCTCTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000082 GO:0000086 GO:0000278 GO:0000307 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009719 GO:0009725 GO:0009755 GO:0009934 GO:0009987 GO:0010033 GO:0010389 GO:0010468 GO:0010564 GO:0016043 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0023052 GO:0030332 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0036211 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044839 GO:0044843 GO:0046777 GO:0048509 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071495 GO:0071704 GO:0071840 GO:0097472 GO:0140096 GO:1901564 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902911 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

313

Amino Acids

35.59

Weight (kDa)

8.54

Isoelectric Point (pI)

31.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	14 - 304	7e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	16 - 221	7.7e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20930 AT1G76540
fragaria_vesca	FvH4_5g26360
malus_domestica	MD00G1064000.v1.1 MD06G1002500.v1.1
prunus_persica	Prupe.5G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0408111 RchiOBHm_Chr6g0250951 RchiOBHm_Chr7g0217191
rosa_laevigata	RLG00000002503 RLG00000008290
rosa_multiflora	Rmu_sc0007586.1_g000005 Rmu_sc0022408.1_g000012 Rmu_sc0025101.1_g000002
rosa_roxburghii	Rroxscaffold_3G00242510
rosa_rugosa	Rorug07G0167200
rosa_samantha	Rh7AG306000 Rh7BG297400 Rh7CG325100 Rh7DG305900
rosa_wichuraiana	Rw7G026000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	305
AccB1I	GGYRCC	1 cut(s)	584
AccI	GTMKAC	1 cut(s)	533
AccII	CGCG	2 cut(s)	136, 180
AciI	CCGC	2 cut(s)	27, 178
AclWI	GGATC	3 cut(s)	206, 455, 468
AcoI	YGGCCR	1 cut(s)	737
AcsI	RAATTY	1 cut(s)	314
AfaI	GTAC	3 cut(s)	273, 278, 860
AfiI	CCNNNNNNNGG	1 cut(s)	823
AflIII	ACRYGT	1 cut(s)	134
AgsI	TTSAA	2 cut(s)	290, 706
AjiI	CACGTC	1 cut(s)	220
AjnI	CCWGG	2 cut(s)	279, 739
AjuI	GAANNNNNNNTTGG	2 cut(s)	648, 680
AluBI	AGCT	7 cut(s)	49, 104, 372, 566, 605, 682, 691
AluI	AGCT	7 cut(s)	49, 104, 372, 566, 605, 682, 691
Alw21I	GWGCWC	3 cut(s)	568, 684, 752
Alw26I	GTCTC	2 cut(s)	143, 666
AlwI	GGATC	3 cut(s)	206, 455, 468
AoxI	GGCC	1 cut(s)	737
ApeKI	GCWGC	2 cut(s)	627, 853
ApoI	RAATTY	1 cut(s)	314
Asp700I	GAANNNNTTC	1 cut(s)	159
AsuC2I	CCSGG	1 cut(s)	109
AsuHPI	GGTGA	1 cut(s)	74
BalI	TGGCCA	1 cut(s)	739
BamHI	GGATCC	1 cut(s)	460
BanI	GGYRCC	1 cut(s)	584
BanII	GRGCYC	2 cut(s)	568, 684
BauI	CACGAG	1 cut(s)	207
BbsI	GAAGAC	1 cut(s)	137
Bbv12I	GWGCWC	3 cut(s)	568, 684, 752
BbvI	GCAGC	2 cut(s)	614, 840
BccI	CCATC	3 cut(s)	451, 796, 883
BciT130I	CCWGG	2 cut(s)	281, 741
BcnI	CCSGG	1 cut(s)	109
BcoDI	GTCTC	2 cut(s)	143, 666
BfmI	CTRYAG	2 cut(s)	600, 854
BglII	AGATCT	3 cut(s)	183, 433, 490
BisI	GCNGC	2 cut(s)	628, 854
BlsI	GCNGC	2 cut(s)	629, 855
Bme1390I	CCNGG	3 cut(s)	109, 281, 741
BmgBI	CACGTC	1 cut(s)	220
BmiI	GGNNCC	2 cut(s)	462, 586
BmrFI	CCNGG	3 cut(s)	109, 281, 741
BmsI	GCATC	2 cut(s)	25, 910
BpiI	GAAGAC	1 cut(s)	137
BpmI	CTGGAG	2 cut(s)	552, 849
BpuEI	CTTGAG	3 cut(s)	71, 422, 740
BpuMI	CCSGG	1 cut(s)	109
BsaJI	CCNNGG	2 cut(s)	30, 409
BsaXI	ACNNNNNCTCC	2 cut(s)	678, 708
Bsc4I	CCNNNNNNNGG	1 cut(s)	823
Bse1I	ACTGG	2 cut(s)	343, 767
BseBI	CCWGG	2 cut(s)	281, 741
BseDI	CCNNGG	2 cut(s)	30, 409
BseGI	GGATG	3 cut(s)	40, 241, 901
BseLI	CCNNNNNNNGG	1 cut(s)	823
BseMII	CTCAG	2 cut(s)	669, 894
BseNI	ACTGG	2 cut(s)	343, 767
BseRI	GAGGAG	1 cut(s)	683
BseXI	GCAGC	2 cut(s)	614, 840
Bsh1236I	CGCG	2 cut(s)	136, 180
BshFI	GGCC	1 cut(s)	739
BshNI	GGYRCC	1 cut(s)	584
BsiHKAI	GWGCWC	3 cut(s)	568, 684, 752
BsiSI	CCGG	1 cut(s)	108
BslFI	GGGAC	2 cut(s)	82, 730
BslI	CCNNNNNNNGG	1 cut(s)	823
BsmAI	GTCTC	2 cut(s)	143, 666
BsmBI	CGTCTC	1 cut(s)	143
BsmFI	GGGAC	2 cut(s)	82, 730
BsmI	GAATGC	2 cut(s)	204, 401
BsnI	GGCC	1 cut(s)	739
Bsp1286I	GDGCHC	3 cut(s)	568, 684, 752
Bsp143I	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
Bsp19I	CCATGG	2 cut(s)	30, 409
BspACI	CCGC	2 cut(s)	27, 178
BspANI	GGCC	1 cut(s)	739
BspCNI	CTCAG	2 cut(s)	670, 893
BspFNI	CGCG	2 cut(s)	136, 180
BspLI	GGNNCC	2 cut(s)	462, 586
BspMAI	CTGCAG	1 cut(s)	858
BspPI	GGATC	3 cut(s)	206, 455, 468
BspT107I	GGYRCC	1 cut(s)	584
BsrI	ACTGG	2 cut(s)	343, 767
BssECI	CCNNGG	2 cut(s)	30, 409
BssMI	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
BssNAI	GTATAC	1 cut(s)	534
BssSI	CACGAG	1 cut(s)	207
BssT1I	CCWWGG	2 cut(s)	30, 409
Bst1107I	GTATAC	1 cut(s)	534
Bst2BI	CACGAG	1 cut(s)	207
Bst2UI	CCWGG	2 cut(s)	281, 741
Bst4CI	ACNGT	3 cut(s)	271, 276, 780
BstC8I	GCNNGC	2 cut(s)	204, 867
BstDEI	CTNAG	3 cut(s)	251, 678, 880
BstDSI	CCRYGG	2 cut(s)	30, 409
BstENI	CCTNNNNNAGG	1 cut(s)	821
BstF5I	GGATG	3 cut(s)	40, 241, 901
BstFNI	CGCG	2 cut(s)	136, 180
BstKTI	GATC	7 cut(s)	186, 214, 436, 463, 493, 838, 919
BstMAI	GTCTC	2 cut(s)	143, 666
BstMBI	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 35, 261, 688, 862, 890
BstNI	CCWGG	2 cut(s)	281, 741
BstSCI	CCNGG	3 cut(s)	107, 279, 739
BstSFI	CTRYAG	2 cut(s)	600, 854
BstUI	CGCG	2 cut(s)	136, 180
BstV1I	GCAGC	2 cut(s)	614, 840
BstV2I	GAAGAC	1 cut(s)	137
BstX2I	RGATCY	4 cut(s)	183, 433, 460, 490
BstYI	RGATCY	4 cut(s)	183, 433, 460, 490
BstZ17I	GTATAC	1 cut(s)	534
BsuRI	GGCC	1 cut(s)	739
BtgI	CCRYGG	2 cut(s)	30, 409
BtrI	CACGTC	1 cut(s)	220
BtsCI	GGATG	3 cut(s)	40, 241, 901
BtsIMutI	CAGTG	3 cut(s)	300, 336, 785
Cac8I	GCNNGC	2 cut(s)	204, 867
CseI	GACGC	2 cut(s)	125, 142
CsiI	ACCWGGT	1 cut(s)	279
Csp6I	GTAC	3 cut(s)	272, 277, 859
CviAII	CATG	6 cut(s)	31, 143, 295, 410, 539, 767
CviQI	GTAC	3 cut(s)	272, 277, 859
DdeI	CTNAG	3 cut(s)	251, 678, 880
DpnI	GATC	7 cut(s)	185, 213, 435, 462, 492, 837, 918
DpnII	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
DrdI	GACNNNNNNGTC	1 cut(s)	305
DseDI	GACNNNNNNGTC	1 cut(s)	305
EaeI	YGGCCR	1 cut(s)	737
EciI	GGCGGA	1 cut(s)	16
Ecl136II	GAGCTC	2 cut(s)	566, 682
Eco130I	CCWWGG	2 cut(s)	30, 409
Eco24I	GRGCYC	2 cut(s)	568, 684
Eco53kI	GAGCTC	2 cut(s)	566, 682
EcoICRI	GAGCTC	2 cut(s)	566, 682
EcoNI	CCTNNNNNAGG	1 cut(s)	821
EcoRII	CCWGG	2 cut(s)	279, 739
EcoT14I	CCWWGG	2 cut(s)	30, 409
EcoT38I	GRGCYC	2 cut(s)	568, 684
ErhI	CCWWGG	2 cut(s)	30, 409
Esp3I	CGTCTC	1 cut(s)	143
FaeI	CATG	6 cut(s)	34, 146, 298, 413, 542, 770
FaqI	GGGAC	2 cut(s)	82, 730
FatI	CATG	6 cut(s)	30, 142, 294, 409, 538, 766
FblI	GTMKAC	1 cut(s)	533
Fnu4HI	GCNGC	2 cut(s)	628, 854
FokI	GGATG	3 cut(s)	47, 248, 888
FriOI	GRGCYC	2 cut(s)	568, 684
Fsp4HI	GCNGC	2 cut(s)	628, 854
GluI	GCNGC	2 cut(s)	628, 854
GsuI	CTGGAG	2 cut(s)	552, 849
HaeIII	GGCC	1 cut(s)	739
HapII	CCGG	1 cut(s)	108
HgaI	GACGC	2 cut(s)	125, 142
Hin1II	CATG	6 cut(s)	34, 146, 298, 413, 542, 770
HindIII	AAGCTT	1 cut(s)	47
HinfI	GANTC	3 cut(s)	674, 793, 876
HpaII	CCGG	1 cut(s)	108
HphI	GGTGA	1 cut(s)	74
Hpy166II	GTNNAC	2 cut(s)	85, 534
Hpy188I	TCNGA	2 cut(s)	323, 679
Hpy188III	TCNNGA	7 cut(s)	43, 209, 310, 367, 454, 569, 757
Hpy8I	GTNNAC	2 cut(s)	85, 534
Hpy99I	CGWCG	3 cut(s)	122, 224, 824
HpyAV	CCTTC	5 cut(s)	59, 149, 174, 254, 520
HpyCH4III	ACNGT	3 cut(s)	271, 276, 780
HpyCH4IV	ACGT	1 cut(s)	219
HpyCH4V	TGCA	4 cut(s)	390, 427, 630, 856
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 35, 261, 688, 862, 890
HpyF3I	CTNAG	3 cut(s)	251, 678, 880
HpySE526I	ACGT	1 cut(s)	219
Hsp92II	CATG	6 cut(s)	34, 146, 298, 413, 542, 770
Kzo9I	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
LmnI	GCTCC	4 cut(s)	571, 687, 696, 898
Lsp1109I	GCAGC	2 cut(s)	614, 840
LweI	GCATC	2 cut(s)	25, 910
MabI	ACCWGGT	1 cut(s)	279
MaeII	ACGT	1 cut(s)	219
MaeIII	GTNAC	2 cut(s)	413, 646
MalI	GATC	7 cut(s)	185, 213, 435, 462, 492, 837, 918
MboI	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
MboII	GAAGA	6 cut(s)	142, 164, 538, 569, 740, 830
MflI	RGATCY	4 cut(s)	183, 433, 460, 490
MhlI	GDGCHC	3 cut(s)	568, 684, 752
MlsI	TGGCCA	1 cut(s)	739
MluCI	AATT	1 cut(s)	314
MluI	ACGCGT	1 cut(s)	134
MluNI	TGGCCA	1 cut(s)	739
MlyI	GAGTC	2 cut(s)	668, 787
MmeI	TCCRAC	2 cut(s)	377, 709
MnlI	CCTC	9 cut(s)	139, 225, 453, 468, 565, 704, 811, 817, 827
Mox20I	TGGCCA	1 cut(s)	739
MroXI	GAANNNNTTC	1 cut(s)	159
MscI	TGGCCA	1 cut(s)	739
MseI	TTAA	3 cut(s)	230, 240, 548
Msp20I	TGGCCA	1 cut(s)	739
MspA1I	CMGCKG	1 cut(s)	605
MspI	CCGG	1 cut(s)	108
MspR9I	CCNGG	3 cut(s)	109, 281, 741
Mva1269I	GAATGC	2 cut(s)	204, 401
MvaI	CCWGG	2 cut(s)	281, 741
MvnI	CGCG	2 cut(s)	136, 180
MwoI	GCNNNNNNNGC	6 cut(s)	26, 35, 261, 688, 862, 890
NciI	CCSGG	1 cut(s)	109
NcoI	CCATGG	2 cut(s)	30, 409
NdeII	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
NlaIII	CATG	6 cut(s)	34, 146, 298, 413, 542, 770
NlaIV	GGNNCC	2 cut(s)	462, 586
NmuCI	GTSAC	2 cut(s)	413, 646
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PctI	GAATGC	2 cut(s)	204, 401
PdmI	GAANNNNTTC	1 cut(s)	159
PfeI	GAWTC	1 cut(s)	876
PkrI	GCNGC	2 cut(s)	629, 855
PleI	GAGTC	2 cut(s)	668, 787
PpsI	GAGTC	2 cut(s)	668, 787
Psp124BI	GAGCTC	2 cut(s)	568, 684
Psp6I	CCWGG	2 cut(s)	279, 739
PspGI	CCWGG	2 cut(s)	279, 739
PspN4I	GGNNCC	2 cut(s)	462, 586
PstI	CTGCAG	1 cut(s)	858
PsuI	RGATCY	4 cut(s)	183, 433, 460, 490
PvuII	CAGCTG	1 cut(s)	605
RsaI	GTAC	3 cut(s)	273, 278, 860
RsaNI	GTAC	3 cut(s)	272, 277, 859
SacI	GAGCTC	2 cut(s)	568, 684
SaqAI	TTAA	3 cut(s)	230, 240, 548
SatI	GCNGC	2 cut(s)	628, 854
Sau3AI	GATC	7 cut(s)	183, 211, 433, 460, 490, 835, 916
SchI	GAGTC	2 cut(s)	668, 787
ScrFI	CCNGG	3 cut(s)	109, 281, 741
SduI	GDGCHC	3 cut(s)	568, 684, 752
SexAI	ACCWGGT	1 cut(s)	279
SfaNI	GCATC	2 cut(s)	25, 910
SfcI	CTRYAG	2 cut(s)	600, 854
SmlI	CTYRAG	3 cut(s)	50, 437, 755
SmoI	CTYRAG	3 cut(s)	50, 437, 755
Sse9I	AATT	1 cut(s)	314
SsiI	CCGC	2 cut(s)	27, 178
SstI	GAGCTC	2 cut(s)	568, 684
StyD4I	CCNGG	3 cut(s)	107, 279, 739
StyI	CCWWGG	2 cut(s)	30, 409
TaaI	ACNGT	3 cut(s)	271, 276, 780
TaiI	ACGT	1 cut(s)	222
TaqI	TCGA	3 cut(s)	42, 791, 819
TasI	AATT	1 cut(s)	314
TatI	WGTACW	1 cut(s)	271
TfiI	GAWTC	1 cut(s)	876
Tru1I	TTAA	3 cut(s)	230, 240, 548
Tru9I	TTAA	3 cut(s)	230, 240, 548
TscAI	CASTG	3 cut(s)	307, 343, 785
TseFI	GTSAC	2 cut(s)	413, 646
TseI	GCWGC	2 cut(s)	627, 853
Tsp45I	GTSAC	2 cut(s)	413, 646
TspDTI	ATGAA	4 cut(s)	307, 539, 741, 783
TspGWI	ACGGA	1 cut(s)	320
TspRI	CASTG	3 cut(s)	307, 343, 785
XagI	CCTNNNNNAGG	1 cut(s)	821
XapI	RAATTY	1 cut(s)	314
XmiI	GTMKAC	1 cut(s)	533
XmnI	GAANNNNTTC	1 cut(s)	159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.