RchiOBHm_Chr7g0217191
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
35066928 .. 35069099
2172 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19436

Sequence Viewer

Length: 945 bp
ATGGAGAAGGCAGGAGGAGCGATCGCAGTGTCGGCGATGGACGCGTTCGAGAAACTGGAGAAGGTCGGAGAAGGGACCTACGGCAAGGTTTACAGAGCCAGAGAGAAGGCCACCGGCAAGATCGTCGCCCTCAAAAAGACTCGCCTCCATGAGGACGAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTCTCCATTTTGCGCATGCTCTCCCGCGACCCGCACGTCGTCAGGTTGATGGACGTGAAGCAAGGCACGAATAAGGAAGGCAAGACTGTGCTCTACTTGGTGTTTGAGTACATGGAAACTGATGTCAAGAAATACATTCGCAGTTTCCGTCAAACTGGAGAAATGATTCCTGCCCCCGTCGTTAAGAGTCTGATGTACCAACTATGCAAAGGTGTTGCCTTCTGCCATGGTCATGGAATCTTACACAGGGATCTTAAGCCTCACAATCTCCTGATGGACCGCAAGAGTATGATCCTTAAGATTGCGGATCTTGGACTGGCTCGAGCATTTACTCTGCCCATCAAGAAGTATACGCATGAGATATTGACCCTTTGGTATAGGGCACCTGAAGTCCTTCTGGGATCCACACATTACTCAACTGCAGTGGACATTTGGTCTGTTGGCTGCATATTTGCTGAACTTGTCACAAAGCAAGCACTCTTCCCTGGGGATTCTGAACTGCAGCAGCTCCTACATATATTCAGGTTGTTGGGTACTCCAAATGAAACAGTGTGGCCAGGTGTAAGCAAACTCATGAACTGGCATGAGTACCCCCAGTGGAGCCCTCAGAGTTTGTCCAAGGCTGTTCCAAATTTGGATGCTGATGGGTTGCATCTGTTGTCGGAAATGTTGCAATATGAGCCTGGAAAACGCATTTCAGCAAAGAAGGCTATGGAACACCCTTACTTTGATGATTTGAACAAAGCTGGCCTCTGA

Protein Analysis

314

Amino Acids

35.52

Weight (kDa)

9.0

Isoelectric Point (pI)

33.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 306 2.9e-68 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 220 3.7e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
Acc16I TGCGCA 1 cut(s) 203
AccB1I GGYRCC 1 cut(s) 571
AccI GTMKAC 1 cut(s) 539
AccII CGCG 3 cut(s) 44, 186, 216
AciI CCGC 5 cut(s) 184, 214, 221, 469, 494
AclWI GGATC 5 cut(s) 447, 475, 504, 585, 598
AcoI YGGCCR 1 cut(s) 743
AcsI RAATTY 1 cut(s) 820
AcuI CTGAAG 1 cut(s) 597
AcyI GRCGYC 1 cut(s) 165
AfaI GTAC 4 cut(s) 299, 386, 724, 779
AfiI CCNNNNNNNGG 1 cut(s) 151
AflII CTTAAG 2 cut(s) 443, 485
AflIII ACRYGT 1 cut(s) 42
AgsI TTSAA 1 cut(s) 928
AhdI GACNNNNNGTC 1 cut(s) 622
AjiI CACGTC 2 cut(s) 226, 244
AjnI CCWGG 3 cut(s) 673, 745, 871
AluBI AGCT 2 cut(s) 697, 935
AluI AGCT 2 cut(s) 697, 935
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 5 cut(s) 447, 475, 504, 585, 598
Ama87I CYCGRG 1 cut(s) 510
AoxI GGCC 3 cut(s) 108, 743, 937
ApeKI GCWGC 3 cut(s) 633, 691, 694
ApoI RAATTY 1 cut(s) 820
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
AsiSI GCGATCGC 1 cut(s) 24
Asp700I GAANNNNTTC 2 cut(s) 354, 582
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 2 cut(s) 75, 466
AvaI CYCGRG 1 cut(s) 510
AvaII GGWCC 2 cut(s) 75, 466
BaeGI GKGCMC 1 cut(s) 574
BalI TGGCCA 1 cut(s) 745
BamHI GGATCC 1 cut(s) 590
BanI GGYRCC 1 cut(s) 571
BanII GRGCYC 1 cut(s) 794
Bbv12I GWGCWC 1 cut(s) 282
BbvI GCAGC 3 cut(s) 620, 703, 706
BccI CCATC 5 cut(s) 31, 232, 457, 536, 827
BceAI ACGGC 1 cut(s) 97
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 3 cut(s) 675, 747, 873
BcoDI GTCTC 1 cut(s) 196
BfmI CTRYAG 2 cut(s) 609, 689
BfrI CTTAAG 2 cut(s) 443, 485
BisI GCNGC 3 cut(s) 634, 692, 695
BlsI GCNGC 3 cut(s) 635, 693, 696
Bme1390I CCNGG 3 cut(s) 675, 747, 873
Bme18I GGWCC 2 cut(s) 75, 466
BmeRI GACNNNNNGTC 1 cut(s) 622
BmeT110I CYCGRG 1 cut(s) 510
BmgBI CACGTC 2 cut(s) 226, 244
BmgT120I GGNCC 2 cut(s) 75, 466
BmiI GGNNCC 4 cut(s) 76, 573, 592, 791
BmrFI CCNGG 3 cut(s) 675, 747, 873
BmrI ACTGGG 1 cut(s) 778
BmsI GCATC 2 cut(s) 817, 850
BmuI ACTGGG 1 cut(s) 778
BpmI CTGGAG 2 cut(s) 77, 366
BsaHI GRCGYC 1 cut(s) 165
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 4 cut(s) 415, 673, 674, 807
Bsc4I CCNNNNNNNGG 1 cut(s) 151
Bse118I RCCGGY 1 cut(s) 113
Bse1I ACTGG 5 cut(s) 60, 349, 510, 773, 784
BseBI CCWGG 3 cut(s) 675, 747, 873
BseDI CCNNGG 4 cut(s) 415, 673, 674, 807
BseGI GGATG 1 cut(s) 832
BseLI CCNNNNNNNGG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 809
BseNI ACTGG 5 cut(s) 60, 349, 510, 773, 784
BseRI GAGGAG 1 cut(s) 30
BseSI GKGCMC 1 cut(s) 574
BseXI GCAGC 3 cut(s) 620, 703, 706
Bsh1236I CGCG 3 cut(s) 44, 186, 216
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 3 cut(s) 110, 745, 939
BshNI GGYRCC 1 cut(s) 571
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 282
BsiHKCI CYCGRG 1 cut(s) 510
BsiSI CCGG 1 cut(s) 114
BslFI GGGAC 2 cut(s) 88, 152
BslI CCNNNNNNNGG 1 cut(s) 151
BsmAI GTCTC 1 cut(s) 196
BsmFI GGGAC 2 cut(s) 88, 152
BsnI GGCC 3 cut(s) 110, 745, 939
Bso31I GGTCTC 1 cut(s) 196
BsoBI CYCGRG 1 cut(s) 510
Bsp1286I GDGCHC 3 cut(s) 282, 574, 794
Bsp143I GATC 6 cut(s) 21, 120, 439, 480, 496, 590
Bsp19I CCATGG 1 cut(s) 415
BspACI CCGC 5 cut(s) 184, 214, 221, 469, 494
BspANI GGCC 3 cut(s) 110, 745, 939
BspCNI CTCAG 1 cut(s) 808
BspFNI CGCG 3 cut(s) 44, 186, 216
BspHI TCATGA 1 cut(s) 762
BspLI GGNNCC 4 cut(s) 76, 573, 592, 791
BspMAI CTGCAG 2 cut(s) 613, 693
BspPI GGATC 5 cut(s) 447, 475, 504, 585, 598
BspT107I GGYRCC 1 cut(s) 571
BspTI CTTAAG 2 cut(s) 443, 485
BspTNI GGTCTC 1 cut(s) 196
BsrFI RCCGGY 1 cut(s) 113
BsrI ACTGG 5 cut(s) 60, 349, 510, 773, 784
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 4 cut(s) 415, 673, 674, 807
BssMI GATC 6 cut(s) 21, 120, 439, 480, 496, 590
BssNAI GTATAC 1 cut(s) 540
BssNI GRCGYC 1 cut(s) 165
BssT1I CCWWGG 2 cut(s) 415, 807
Bst1107I GTATAC 1 cut(s) 540
Bst2UI CCWGG 3 cut(s) 675, 747, 873
Bst4CI ACNGT 2 cut(s) 277, 739
Bst6I CTCTTC 1 cut(s) 674
BstACI GRCGYC 1 cut(s) 165
BstAFI CTTAAG 2 cut(s) 443, 485
BstC8I GCNNGC 3 cut(s) 206, 663, 937
BstDEI CTNAG 1 cut(s) 795
BstDSI CCRYGG 1 cut(s) 415
BstENI CCTNNNNNAGG 1 cut(s) 149
BstF5I GGATG 1 cut(s) 832
BstFNI CGCG 3 cut(s) 44, 186, 216
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 6 cut(s) 24, 123, 442, 483, 499, 593
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 6 cut(s) 21, 120, 439, 480, 496, 590
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 5 cut(s) 17, 32, 41, 868, 896
BstNI CCWGG 3 cut(s) 675, 747, 873
BstNSI RCATGY 1 cut(s) 208
BstSCI CCNGG 3 cut(s) 673, 745, 871
BstSFI CTRYAG 2 cut(s) 609, 689
BstSLI GKGCMC 1 cut(s) 574
BstUI CGCG 3 cut(s) 44, 186, 216
BstV1I GCAGC 3 cut(s) 620, 703, 706
BstX2I RGATCY 3 cut(s) 439, 496, 590
BstXI CCANNNNNNTGG 1 cut(s) 422
BstYI RGATCY 3 cut(s) 439, 496, 590
BstZ17I GTATAC 1 cut(s) 540
BsuRI GGCC 3 cut(s) 110, 745, 939
BtgI CCRYGG 1 cut(s) 415
BtgZI GCGATG 1 cut(s) 50
BtrI CACGTC 2 cut(s) 226, 244
BtsCI GGATG 1 cut(s) 832
BtsI GCAGTG 2 cut(s) 33, 618
BtsIMutI CAGTG 4 cut(s) 33, 618, 744, 791
Cac8I GCNNGC 3 cut(s) 206, 663, 937
CciI TCATGA 1 cut(s) 762
CfoI GCGC 1 cut(s) 204
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 2 cut(s) 75, 466
CseI GACGC 2 cut(s) 50, 154
Csp6I GTAC 4 cut(s) 298, 385, 723, 778
CspCI CAANNNNNGTGG 2 cut(s) 594, 629
CviAII CATG 8 cut(s) 149, 205, 301, 416, 422, 545, 763, 773
CviQI GTAC 4 cut(s) 298, 385, 723, 778
DdeI CTNAG 1 cut(s) 795
DpnI GATC 6 cut(s) 23, 122, 441, 482, 498, 592
DpnII GATC 6 cut(s) 21, 120, 439, 480, 496, 590
DrdI GACNNNNNNGTC 1 cut(s) 224
DriI GACNNNNNGTC 1 cut(s) 622
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 743
Eam1104I CTCTTC 1 cut(s) 674
Eam1105I GACNNNNNGTC 1 cut(s) 622
EarI CTCTTC 1 cut(s) 674
Eco130I CCWWGG 2 cut(s) 415, 807
Eco24I GRGCYC 1 cut(s) 794
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 2 cut(s) 75, 466
Eco57I CTGAAG 1 cut(s) 597
Eco88I CYCGRG 1 cut(s) 510
EcoNI CCTNNNNNAGG 1 cut(s) 149
EcoO109I RGGNCCY 1 cut(s) 75
EcoRII CCWGG 3 cut(s) 673, 745, 871
EcoT14I CCWWGG 2 cut(s) 415, 807
EcoT38I GRGCYC 1 cut(s) 794
ErhI CCWWGG 2 cut(s) 415, 807
FaeI CATG 8 cut(s) 152, 208, 304, 419, 425, 548, 766, 776
FaqI GGGAC 2 cut(s) 88, 152
FatI CATG 8 cut(s) 148, 204, 300, 415, 421, 544, 762, 772
FauI CCCGC 2 cut(s) 221, 228
FblI GTMKAC 1 cut(s) 539
Fnu4HI GCNGC 3 cut(s) 634, 692, 695
FokI GGATG 1 cut(s) 839
FriOI GRGCYC 1 cut(s) 794
Fsp4HI GCNGC 3 cut(s) 634, 692, 695
FspI TGCGCA 1 cut(s) 203
GlaI GCGC 1 cut(s) 203
GluI GCNGC 3 cut(s) 634, 692, 695
GsuI CTGGAG 2 cut(s) 77, 366
HaeIII GGCC 3 cut(s) 110, 745, 939
HapII CCGG 1 cut(s) 114
HgaI GACGC 2 cut(s) 50, 154
HhaI GCGC 1 cut(s) 204
Hin1I GRCGYC 1 cut(s) 165
Hin1II CATG 8 cut(s) 152, 208, 304, 419, 425, 548, 766, 776
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HinfI GANTC 5 cut(s) 139, 355, 376, 426, 680
HpaII CCGG 1 cut(s) 114
Hpy166II GTNNAC 3 cut(s) 91, 540, 616
Hpy188I TCNGA 6 cut(s) 68, 381, 685, 798, 853, 944
Hpy188III TCNNGA 5 cut(s) 49, 316, 460, 532, 763
Hpy8I GTNNAC 3 cut(s) 91, 540, 616
Hpy99I CGWCG 3 cut(s) 128, 230, 371
HpyAV CCTTC 8 cut(s) 55, 65, 100, 155, 260, 418, 593, 889
HpyCH4III ACNGT 2 cut(s) 277, 739
HpyCH4IV ACGT 2 cut(s) 225, 243
HpyCH4V TGCA 6 cut(s) 396, 611, 636, 691, 841, 862
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 32, 41, 868, 896
HpyF3I CTNAG 1 cut(s) 795
HpySE526I ACGT 2 cut(s) 225, 243
Hsp92I GRCGYC 1 cut(s) 165
Hsp92II CATG 8 cut(s) 152, 208, 304, 419, 425, 548, 766, 776
HspAI GCGC 1 cut(s) 202
Kzo9I GATC 6 cut(s) 21, 120, 439, 480, 496, 590
LmnI GCTCC 3 cut(s) 17, 702, 789
Lsp1109I GCAGC 3 cut(s) 620, 703, 706
LweI GCATC 2 cut(s) 817, 850
MaeII ACGT 2 cut(s) 225, 243
MaeIII GTNAC 1 cut(s) 652
MalI GATC 6 cut(s) 23, 122, 441, 482, 498, 592
MboI GATC 6 cut(s) 21, 120, 439, 480, 496, 590
MboII GAAGA 2 cut(s) 170, 661
MflI RGATCY 3 cut(s) 439, 496, 590
MhlI GDGCHC 3 cut(s) 282, 574, 794
MlsI TGGCCA 1 cut(s) 745
MluCI AATT 1 cut(s) 820
MluI ACGCGT 1 cut(s) 42
MluNI TGGCCA 1 cut(s) 745
MlyI GAGTC 2 cut(s) 133, 385
MmeI TCCRAC 2 cut(s) 46, 831
MnlI CCTC 8 cut(s) 8, 140, 145, 155, 180, 181, 459, 804
Mox20I TGGCCA 1 cut(s) 745
MroXI GAANNNNTTC 2 cut(s) 354, 582
MscI TGGCCA 1 cut(s) 745
MseI TTAA 3 cut(s) 372, 444, 486
MslI CAYNNNNRTG 1 cut(s) 420
Msp20I TGGCCA 1 cut(s) 745
MspCI CTTAAG 2 cut(s) 443, 485
MspI CCGG 1 cut(s) 114
MspR9I CCNGG 3 cut(s) 675, 747, 873
MvaI CCWGG 3 cut(s) 675, 747, 873
MvnI CGCG 3 cut(s) 44, 186, 216
MwoI GCNNNNNNNGC 5 cut(s) 17, 32, 41, 868, 896
NcoI CCATGG 1 cut(s) 415
NdeII GATC 6 cut(s) 21, 120, 439, 480, 496, 590
NlaIII CATG 8 cut(s) 152, 208, 304, 419, 425, 548, 766, 776
NlaIV GGNNCC 4 cut(s) 76, 573, 592, 791
NmuCI GTSAC 1 cut(s) 652
NsbI TGCGCA 1 cut(s) 203
NspI RCATGY 1 cut(s) 208
PaeI GCATGC 1 cut(s) 208
PaeR7I CTCGAG 1 cut(s) 510
PagI TCATGA 1 cut(s) 762
PasI CCCWGGG 1 cut(s) 674
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 334
PdmI GAANNNNTTC 2 cut(s) 354, 582
PfeI GAWTC 3 cut(s) 355, 426, 680
PkrI GCNGC 3 cut(s) 635, 693, 696
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 2 cut(s) 133, 384
PpsI GAGTC 2 cut(s) 133, 384
PpuMI RGGWCCY 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 75
Psp6I CCWGG 3 cut(s) 673, 745, 871
PspGI CCWGG 3 cut(s) 673, 745, 871
PspN4I GGNNCC 4 cut(s) 76, 573, 592, 791
PspPI GGNCC 2 cut(s) 75, 466
PspPPI RGGWCCY 1 cut(s) 75
PspXI VCTCGAGB 1 cut(s) 510
PstI CTGCAG 2 cut(s) 613, 693
PsuI RGATCY 3 cut(s) 439, 496, 590
PvuI CGATCG 1 cut(s) 24
RgaI GCGATCGC 1 cut(s) 24
RsaI GTAC 4 cut(s) 299, 386, 724, 779
RsaNI GTAC 4 cut(s) 298, 385, 723, 778
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 3 cut(s) 372, 444, 486
SatI GCNGC 3 cut(s) 634, 692, 695
Sau3AI GATC 6 cut(s) 21, 120, 439, 480, 496, 590
Sau96I GGNCC 2 cut(s) 75, 466
SchI GAGTC 2 cut(s) 133, 385
ScrFI CCNGG 3 cut(s) 675, 747, 873
SduI GDGCHC 3 cut(s) 282, 574, 794
SfaAI GCGATCGC 1 cut(s) 24
SfaNI GCATC 2 cut(s) 817, 850
SfcI CTRYAG 2 cut(s) 609, 689
Sfr274I CTCGAG 1 cut(s) 510
SgfI GCGATCGC 1 cut(s) 24
SinI GGWCC 2 cut(s) 75, 466
SlaI CTCGAG 1 cut(s) 510
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 3 cut(s) 443, 485, 510
SmoI CTYRAG 3 cut(s) 443, 485, 510
SphI GCATGC 1 cut(s) 208
Sse9I AATT 1 cut(s) 820
SsiI CCGC 5 cut(s) 184, 214, 221, 469, 494
StyD4I CCNGG 3 cut(s) 673, 745, 871
StyI CCWWGG 2 cut(s) 415, 807
TaaI ACNGT 2 cut(s) 277, 739
TaiI ACGT 2 cut(s) 228, 246
TaqI TCGA 2 cut(s) 48, 511
TasI AATT 1 cut(s) 820
TatI WGTACW 1 cut(s) 297
TfiI GAWTC 3 cut(s) 355, 426, 680
Tru1I TTAA 3 cut(s) 372, 444, 486
Tru9I TTAA 3 cut(s) 372, 444, 486
TscAI CASTG 4 cut(s) 33, 618, 744, 791
TseFI GTSAC 1 cut(s) 652
TseI GCWGC 3 cut(s) 633, 691, 694
Tsp45I GTSAC 1 cut(s) 652
TspDTI ATGAA 2 cut(s) 747, 779
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 4 cut(s) 33, 618, 744, 791
Vha464I CTTAAG 2 cut(s) 443, 485
VpaK11BI GGWCC 2 cut(s) 75, 466
XagI CCTNNNNNAGG 1 cut(s) 149
XapI RAATTY 1 cut(s) 820
XceI RCATGY 1 cut(s) 208
XhoI CTCGAG 1 cut(s) 510
XmiI GTMKAC 1 cut(s) 539
XmnI GAANNNNTTC 2 cut(s) 354, 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.