Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009771

Physical Location & Seq

Genomic Coordinates Forward (+)

483417 .. 485958

Gene Structure 2542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G003700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 948 bp

ATGGAGTCGAAGGCAGCGAATACAACAACAGTGTCGGCGATGGATGCGTTCGAGAAGCTTGAGAAGGTGGGAGAAGGAACGTACGGGAAGGTTTACAGAGCGAGGGAGAAGGCGACTGGGAAGATCGTGGCCCTCAAGAAGACTCGTCTCCATGAGGACGAGGAAGGCGTCCCTCCCACCACTCTTCGTGAGGTCTCCATTTTGCGCATGCTCTCCAGAGACCCCCACATCGTCAGGTTGATGGATGTGAAACAAGGACAGAACAAGGAAGGCAAGACTGTGCTTTACTTGGTGTTTGAGTATATGGACACTGATCTTAAGAAGTACATCCGCACCTTCCGTCAATCTGGAGAATACATACCTTCCCCCATCGTTAAGAGCCTGATGTACCAACTTTGCAAAGGTGTTGCCTTTTGCCATGGTCATGGAATCTTACACAGGGATCTTAAGCCTCACAATCTCCTCATGGACCGCAAGACAATGATGCTTAAAATTGCTGATCTTGGACTAGCTCGAGCTTTTACTGTACCACTCAGGAAGTATACTCATGAGATATTGACCCTGTGGTATAGGGCTCCTGAAGTCCTTCTGGGAGCTACACATTACTCAACTGCAGTGGATATCTGGTCTGTTGGCTGTATATTTGCTGAACTTGTCACGAAGCAAGCACTCTTCCCGGGGGATTCTGAACTGCAGCAGCTCCTACATATATTCAGGTTGTTAGGTACTCCAAATGAAGAAGTGTGGCCAGGTGTAAGCAAACTCATGAACTGGCATGAATACCCCCAGTGGAACCCTCAAAGTTTGTCCAAGGCTGTTCCCAATTTGGATGCGATGGGGTTGGATTTGTTATTGCAAATGTTGCAATATGAGCCTGCAAAACGCATTTCAGCAAAGAAAGCTATGGAACACCCTTACTTTGATGATCTGAACAAGGCTTCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000082 GO:0000086 GO:0000278 GO:0000307 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009719 GO:0009725 GO:0009755 GO:0009934 GO:0009987 GO:0010033 GO:0010389 GO:0010468 GO:0010564 GO:0016043 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0023052 GO:0030332 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0036211 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044839 GO:0044843 GO:0046777 GO:0048509 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071495 GO:0071704 GO:0071840 GO:0097472 GO:0140096 GO:1901564 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902911 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

316

Amino Acids

35.97

Weight (kDa)

9.0

Isoelectric Point (pI)

37.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20930 AT1G76540
fragaria_vesca	FvH4_5g26360
malus_domestica	MD00G1064000.v1.1 MD06G1002500.v1.1
prunus_persica	Prupe.5G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0408111 RchiOBHm_Chr6g0250951 RchiOBHm_Chr7g0217191
rosa_laevigata	RLG00000002503 RLG00000008290
rosa_multiflora	Rmu_sc0007586.1_g000005 Rmu_sc0022408.1_g000012 Rmu_sc0025101.1_g000002
rosa_roxburghii	Rroxscaffold_3G00242510
rosa_rugosa	Rorug07G0167200
rosa_samantha	Rh7AG306000 Rh7BG297400 Rh7CG325100 Rh7DG305900
rosa_wichuraiana	Rw7G026000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	206
AccI	GTMKAC	1 cut(s)	542
AciI	CCGC	2 cut(s)	331, 472
AclWI	GGATC	1 cut(s)	450
AcoI	YGGCCR	1 cut(s)	746
AcuI	CTGAAG	1 cut(s)	600
AcyI	GRCGYC	1 cut(s)	168
AfaI	GTAC	5 cut(s)	83, 326, 389, 528, 727
AflII	CTTAAG	2 cut(s)	317, 446
AjnI	CCWGG	1 cut(s)	748
AluBI	AGCT	6 cut(s)	58, 512, 518, 596, 700, 902
AluI	AGCT	6 cut(s)	58, 512, 518, 596, 700, 902
Alw26I	GTCTC	3 cut(s)	152, 199, 213
AlwI	GGATC	1 cut(s)	450
Ama87I	CYCGRG	2 cut(s)	513, 676
AoxI	GGCC	2 cut(s)	129, 746
ApeKI	GCWGC	3 cut(s)	14, 694, 697
Asp700I	GAANNNNTTC	1 cut(s)	585
AspLEI	GCGC	1 cut(s)	207
AspS9I	GGNCC	2 cut(s)	130, 469
AsuC2I	CCSGG	2 cut(s)	677, 678
AvaI	CYCGRG	2 cut(s)	513, 676
AvaII	GGWCC	1 cut(s)	469
BalI	TGGCCA	1 cut(s)	748
BanII	GRGCYC	1 cut(s)	577
BbsI	GAAGAC	1 cut(s)	146
BbvI	GCAGC	3 cut(s)	26, 706, 709
BccI	CCATC	4 cut(s)	34, 235, 377, 829
BciT130I	CCWGG	1 cut(s)	750
BcnI	CCSGG	2 cut(s)	677, 678
BcoDI	GTCTC	3 cut(s)	152, 199, 213
BfaI	CTAG	1 cut(s)	509
BfmI	CTRYAG	2 cut(s)	612, 692
BfrI	CTTAAG	2 cut(s)	317, 446
BisI	GCNGC	3 cut(s)	15, 695, 698
BlsI	GCNGC	3 cut(s)	16, 696, 699
Bme1390I	CCNGG	3 cut(s)	677, 678, 750
Bme18I	GGWCC	1 cut(s)	469
BmeT110I	CYCGRG	2 cut(s)	513, 676
BmgT120I	GGNCC	2 cut(s)	130, 469
BmiI	GGNNCC	2 cut(s)	576, 794
BmrFI	CCNGG	3 cut(s)	677, 678, 750
BmrI	ACTGGG	2 cut(s)	126, 781
BmsI	GCATC	3 cut(s)	34, 474, 820
BmuI	ACTGGG	2 cut(s)	126, 781
BpiI	GAAGAC	1 cut(s)	146
BpmI	CTGGAG	2 cut(s)	199, 369
BpuEI	CTTGAG	2 cut(s)	80, 119
BpuMI	CCSGG	2 cut(s)	677, 678
BsaHI	GRCGYC	1 cut(s)	168
BsaI	GGTCTC	2 cut(s)	199, 213
BsaJI	CCNNGG	4 cut(s)	418, 676, 677, 810
Bse1I	ACTGG	3 cut(s)	121, 776, 787
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	4 cut(s)	418, 676, 677, 810
BseGI	GGATG	4 cut(s)	49, 250, 327, 835
BseMII	CTCAG	1 cut(s)	547
BseNI	ACTGG	3 cut(s)	121, 776, 787
BseRI	GAGGAG	1 cut(s)	452
BseXI	GCAGC	3 cut(s)	26, 706, 709
BshFI	GGCC	2 cut(s)	131, 748
BsiHKCI	CYCGRG	2 cut(s)	513, 676
BsiSI	CCGG	1 cut(s)	677
BsiWI	CGTACG	1 cut(s)	81
BslFI	GGGAC	1 cut(s)	155
BsmAI	GTCTC	3 cut(s)	152, 199, 213
BsmBI	CGTCTC	1 cut(s)	152
BsmFI	GGGAC	1 cut(s)	155
BsnI	GGCC	2 cut(s)	131, 748
Bso31I	GGTCTC	2 cut(s)	199, 213
BsoBI	CYCGRG	2 cut(s)	513, 676
Bsp1286I	GDGCHC	1 cut(s)	577
Bsp143I	GATC	5 cut(s)	123, 313, 442, 499, 925
Bsp19I	CCATGG	1 cut(s)	418
BspACI	CCGC	2 cut(s)	331, 472
BspANI	GGCC	2 cut(s)	131, 748
BspCNI	CTCAG	1 cut(s)	546
BspHI	TCATGA	2 cut(s)	547, 765
BspLI	GGNNCC	2 cut(s)	576, 794
BspMAI	CTGCAG	2 cut(s)	616, 696
BspPI	GGATC	1 cut(s)	450
BspTI	CTTAAG	2 cut(s)	317, 446
BspTNI	GGTCTC	2 cut(s)	199, 213
BsrI	ACTGG	3 cut(s)	121, 776, 787
BssECI	CCNNGG	4 cut(s)	418, 676, 677, 810
BssMI	GATC	5 cut(s)	123, 313, 442, 499, 925
BssNAI	GTATAC	1 cut(s)	543
BssNI	GRCGYC	1 cut(s)	168
BssT1I	CCWWGG	2 cut(s)	418, 810
Bst1107I	GTATAC	1 cut(s)	543
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	3 cut(s)	31, 280, 526
Bst6I	CTCTTC	2 cut(s)	189, 677
BstACI	GRCGYC	1 cut(s)	168
BstAFI	CTTAAG	2 cut(s)	317, 446
BstAPI	GCANNNNNTGC	1 cut(s)	862
BstC8I	GCNNGC	3 cut(s)	209, 666, 876
BstDEI	CTNAG	1 cut(s)	533
BstDSI	CCRYGG	1 cut(s)	418
BstF5I	GGATG	4 cut(s)	49, 250, 327, 835
BstHHI	GCGC	1 cut(s)	207
BstKTI	GATC	5 cut(s)	126, 316, 445, 502, 928
BstMAI	GTCTC	3 cut(s)	152, 199, 213
BstMBI	GATC	5 cut(s)	123, 313, 442, 499, 925
BstMWI	GCNNNNNNNGC	4 cut(s)	44, 862, 871, 899
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	1 cut(s)	211
BstSCI	CCNGG	3 cut(s)	675, 676, 748
BstSFI	CTRYAG	2 cut(s)	612, 692
BstV1I	GCAGC	3 cut(s)	26, 706, 709
BstV2I	GAAGAC	1 cut(s)	146
BstX2I	RGATCY	1 cut(s)	442
BstXI	CCANNNNNNTGG	1 cut(s)	425
BstYI	RGATCY	1 cut(s)	442
BstZ17I	GTATAC	1 cut(s)	543
BsuRI	GGCC	2 cut(s)	131, 748
BtgI	CCRYGG	1 cut(s)	418
BtgZI	GCGATG	2 cut(s)	53, 848
BtsCI	GGATG	4 cut(s)	49, 250, 327, 835
BtsI	GCAGTG	1 cut(s)	621
BtsIMutI	CAGTG	4 cut(s)	36, 309, 621, 794
Cac8I	GCNNGC	3 cut(s)	209, 666, 876
CciI	TCATGA	2 cut(s)	547, 765
CfoI	GCGC	1 cut(s)	207
Cfr13I	GGNCC	2 cut(s)	130, 469
Cfr9I	CCCGGG	1 cut(s)	676
CseI	GACGC	1 cut(s)	157
Csp6I	GTAC	5 cut(s)	82, 325, 388, 527, 726
CspCI	CAANNNNNGTGG	2 cut(s)	597, 632
CviAII	CATG	8 cut(s)	152, 208, 419, 425, 466, 548, 766, 776
CviQI	GTAC	5 cut(s)	82, 325, 388, 527, 726
DdeI	CTNAG	1 cut(s)	533
DpnI	GATC	5 cut(s)	125, 315, 444, 501, 927
DpnII	GATC	5 cut(s)	123, 313, 442, 499, 925
EaeI	YGGCCR	1 cut(s)	746
Eam1104I	CTCTTC	2 cut(s)	189, 677
EarI	CTCTTC	2 cut(s)	189, 677
Eco130I	CCWWGG	2 cut(s)	418, 810
Eco24I	GRGCYC	1 cut(s)	577
Eco31I	GGTCTC	2 cut(s)	199, 213
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	1 cut(s)	469
Eco57I	CTGAAG	1 cut(s)	600
Eco88I	CYCGRG	2 cut(s)	513, 676
EcoRII	CCWGG	1 cut(s)	748
EcoRV	GATATC	1 cut(s)	622
EcoT14I	CCWWGG	2 cut(s)	418, 810
EcoT38I	GRGCYC	1 cut(s)	577
ErhI	CCWWGG	2 cut(s)	418, 810
Esp3I	CGTCTC	1 cut(s)	152
FaeI	CATG	8 cut(s)	155, 211, 422, 428, 469, 551, 769, 779
FaqI	GGGAC	1 cut(s)	155
FatI	CATG	8 cut(s)	151, 207, 418, 424, 465, 547, 765, 775
FblI	GTMKAC	1 cut(s)	542
Fnu4HI	GCNGC	3 cut(s)	15, 695, 698
FokI	GGATG	4 cut(s)	56, 257, 314, 842
FriOI	GRGCYC	1 cut(s)	577
Fsp4HI	GCNGC	3 cut(s)	15, 695, 698
FspBI	CTAG	1 cut(s)	509
FspI	TGCGCA	1 cut(s)	206
GlaI	GCGC	1 cut(s)	206
GluI	GCNGC	3 cut(s)	15, 695, 698
GsuI	CTGGAG	2 cut(s)	199, 369
HaeIII	GGCC	2 cut(s)	131, 748
HapII	CCGG	1 cut(s)	677
HgaI	GACGC	1 cut(s)	157
HhaI	GCGC	1 cut(s)	207
Hin1I	GRCGYC	1 cut(s)	168
Hin1II	CATG	8 cut(s)	155, 211, 422, 428, 469, 551, 769, 779
Hin6I	GCGC	1 cut(s)	205
HinP1I	GCGC	1 cut(s)	205
HindIII	AAGCTT	1 cut(s)	56
HinfI	GANTC	4 cut(s)	5, 142, 429, 683
HpaII	CCGG	1 cut(s)	677
Hpy166II	GTNNAC	2 cut(s)	94, 543
Hpy188I	TCNGA	2 cut(s)	688, 930
Hpy8I	GTNNAC	2 cut(s)	94, 543
HpyCH4III	ACNGT	3 cut(s)	31, 280, 526
HpyCH4IV	ACGT	1 cut(s)	80
HpyCH4V	TGCA	6 cut(s)	399, 614, 694, 856, 865, 878
HpyF10VI	GCNNNNNNNGC	4 cut(s)	44, 862, 871, 899
HpyF3I	CTNAG	1 cut(s)	533
HpySE526I	ACGT	1 cut(s)	80
Hsp92I	GRCGYC	1 cut(s)	168
Hsp92II	CATG	8 cut(s)	155, 211, 422, 428, 469, 551, 769, 779
HspAI	GCGC	1 cut(s)	205
Kzo9I	GATC	5 cut(s)	123, 313, 442, 499, 925
LmnI	GCTCC	3 cut(s)	580, 593, 705
Lsp1109I	GCAGC	3 cut(s)	26, 706, 709
LweI	GCATC	3 cut(s)	34, 474, 820
MaeI	CTAG	1 cut(s)	509
MaeII	ACGT	1 cut(s)	80
MaeIII	GTNAC	1 cut(s)	655
MalI	GATC	5 cut(s)	125, 315, 444, 501, 927
MboI	GATC	5 cut(s)	123, 313, 442, 499, 925
MboII	GAAGA	5 cut(s)	133, 151, 176, 664, 749
MflI	RGATCY	1 cut(s)	442
MhlI	GDGCHC	1 cut(s)	577
MlsI	TGGCCA	1 cut(s)	748
MluCI	AATT	2 cut(s)	492, 823
MluNI	TGGCCA	1 cut(s)	748
MlyI	GAGTC	2 cut(s)	14, 136
MmeI	TCCRAC	1 cut(s)	822
MnlI	CCTC	9 cut(s)	96, 143, 148, 154, 183, 184, 462, 473, 807
Mox20I	TGGCCA	1 cut(s)	748
MroXI	GAANNNNTTC	1 cut(s)	585
MscI	TGGCCA	1 cut(s)	748
MseI	TTAA	4 cut(s)	318, 375, 447, 489
MslI	CAYNNNNRTG	1 cut(s)	423
Msp20I	TGGCCA	1 cut(s)	748
MspCI	CTTAAG	2 cut(s)	317, 446
MspI	CCGG	1 cut(s)	677
MspR9I	CCNGG	3 cut(s)	677, 678, 750
MvaI	CCWGG	1 cut(s)	750
MwoI	GCNNNNNNNGC	4 cut(s)	44, 862, 871, 899
NciI	CCSGG	2 cut(s)	677, 678
NcoI	CCATGG	1 cut(s)	418
NdeII	GATC	5 cut(s)	123, 313, 442, 499, 925
NlaIII	CATG	8 cut(s)	155, 211, 422, 428, 469, 551, 769, 779
NlaIV	GGNNCC	2 cut(s)	576, 794
NmuCI	GTSAC	1 cut(s)	655
NsbI	TGCGCA	1 cut(s)	206
NspI	RCATGY	1 cut(s)	211
PaeI	GCATGC	1 cut(s)	211
PaeR7I	CTCGAG	1 cut(s)	513
PagI	TCATGA	2 cut(s)	547, 765
PcsI	WCGNNNNNNNCGW	2 cut(s)	14, 165
PdmI	GAANNNNTTC	1 cut(s)	585
PfeI	GAWTC	2 cut(s)	429, 683
Pfl23II	CGTACG	1 cut(s)	81
PkrI	GCNGC	3 cut(s)	16, 696, 699
PleI	GAGTC	2 cut(s)	13, 136
PpsI	GAGTC	2 cut(s)	13, 136
Psp6I	CCWGG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	748
PspLI	CGTACG	1 cut(s)	81
PspN4I	GGNNCC	2 cut(s)	576, 794
PspPI	GGNCC	2 cut(s)	130, 469
PspXI	VCTCGAGB	1 cut(s)	513
PstI	CTGCAG	2 cut(s)	616, 696
PsuI	RGATCY	1 cut(s)	442
RsaI	GTAC	5 cut(s)	83, 326, 389, 528, 727
RsaNI	GTAC	5 cut(s)	82, 325, 388, 527, 726
RseI	CAYNNNNRTG	1 cut(s)	423
SaqAI	TTAA	4 cut(s)	318, 375, 447, 489
SatI	GCNGC	3 cut(s)	15, 695, 698
Sau3AI	GATC	5 cut(s)	123, 313, 442, 499, 925
Sau96I	GGNCC	2 cut(s)	130, 469
SchI	GAGTC	2 cut(s)	14, 136
ScrFI	CCNGG	3 cut(s)	677, 678, 750
SduI	GDGCHC	1 cut(s)	577
SfaNI	GCATC	3 cut(s)	34, 474, 820
SfcI	CTRYAG	2 cut(s)	612, 692
Sfr274I	CTCGAG	1 cut(s)	513
SinI	GGWCC	1 cut(s)	469
SlaI	CTCGAG	1 cut(s)	513
SmaI	CCCGGG	1 cut(s)	678
SmiMI	CAYNNNNRTG	1 cut(s)	423
SmlI	CTYRAG	5 cut(s)	59, 134, 317, 446, 513
SmoI	CTYRAG	5 cut(s)	59, 134, 317, 446, 513
SphI	GCATGC	1 cut(s)	211
Sse9I	AATT	2 cut(s)	492, 823
SsiI	CCGC	2 cut(s)	331, 472
SspMI	CTAG	1 cut(s)	509
StyD4I	CCNGG	3 cut(s)	675, 676, 748
StyI	CCWWGG	2 cut(s)	418, 810
TaaI	ACNGT	3 cut(s)	31, 280, 526
TaiI	ACGT	1 cut(s)	83
TaqI	TCGA	3 cut(s)	8, 51, 514
TasI	AATT	2 cut(s)	492, 823
TatI	WGTACW	1 cut(s)	324
TfiI	GAWTC	2 cut(s)	429, 683
Tru1I	TTAA	4 cut(s)	318, 375, 447, 489
Tru9I	TTAA	4 cut(s)	318, 375, 447, 489
TscAI	CASTG	4 cut(s)	36, 316, 621, 794
TseFI	GTSAC	1 cut(s)	655
TseI	GCWGC	3 cut(s)	14, 694, 697
Tsp45I	GTSAC	1 cut(s)	655
TspDTI	ATGAA	3 cut(s)	750, 782, 792
TspGWI	ACGGA	1 cut(s)	329
TspMI	CCCGGG	1 cut(s)	676
TspRI	CASTG	4 cut(s)	36, 316, 621, 794
Vha464I	CTTAAG	2 cut(s)	317, 446
VpaK11BI	GGWCC	1 cut(s)	469
XceI	RCATGY	1 cut(s)	211
XhoI	CTCGAG	1 cut(s)	513
XmaI	CCCGGG	1 cut(s)	676
XmiI	GTMKAC	1 cut(s)	542
XmnI	GAANNNNTTC	1 cut(s)	585
XspI	CTAG	1 cut(s)	509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.