FvH4_5g26360
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
17870919 .. 17873338
2420 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g26360.t1

Sequence Viewer

Length: 945 bp
ATGGAGGATCCAGGAGCGACGATCGCAGCGTCGGCGATGGACGCGTTCGAGAAACTGGAGAAGGTCGGAGAAGGTACCTACGGGAAGGTCTACAGAGCCAGAGTGAAGGCCACCGGCAAGATCGTCGCTCTCAAAAAGACTCGTCTCCACGAAGACGAAGAAGGCGTCCCTCCCACTACCCTCCGCGAGGTCTCCATCCTGCGCATGCTCTCCCGCGACCCTCACGTCGTCAGGTTGATGGATGTGAAGCAAGGCACGAACAAGGAAGGCAAGACTGTGCTCTACTTGGTGTTTGAGTACATGGAGACTGATGTCAAGAAATACATTCGCACTTTTCGTCAGTCTGGACAATCCATTCCTGCTCCTATTGTTAAGAGTCTGATGTACCAACTGTGCAAAGGTGTGGCCTTCTGCCACGGTCATGGGATCTTACACAGGGATCTTAAGCCTCACAATCTTCTGATGGACCCCAAGACTTTGACACTTAAGATTGCGGATCTTGGACTGGCTCGTGCTTATACTCTGCCCATCAAGAAGTATACTCATGAGATTTTGACCCTTTGGTATAGGGCACCTGAAGTCCTTCTAGGATCCACACATTACTCGACTGCAGTAGATATTTGGTCTGTTGGCTGCATATTTGCTGAACTTGTCACAAAGCAAGCACTCTTCCCTGGGGATTCTGAACTGCAACAGCTCCTACATATATTCAGGTTGTTGGGTACTCCCAATGAAACCATGTGGCCAGGTGTAAGCAAGCTCATGAACTGGCATGAGTACCCCCAGTGGAGCCCTCAGCGTTTGTCCAAGGCTGTTCCAAATTTGGATGCCGATGGGTTGCATCTGTTGTCGGAAATGTTGCAATATGAGCCTGGAAAACGCATTTCAGCAAAGAAGGCCATGGAACACCCTTACTTTGATGATTTGAACAAGGCTGGTCTGTGA

Protein Analysis

315

Amino Acids

35.53

Weight (kDa)

9.0

Isoelectric Point (pI)

33.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 306 1.4e-67 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 220 1.4e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
Acc16I TGCGCA 1 cut(s) 203
Acc65I GGTACC 1 cut(s) 74
AccB1I GGYRCC 2 cut(s) 74, 571
AccI GTMKAC 2 cut(s) 90, 539
AccII CGCG 3 cut(s) 44, 186, 216
AciI CCGC 3 cut(s) 184, 214, 494
AclWI GGATC 7 cut(s) 2, 15, 434, 447, 504, 585, 598
AcoI YGGCCR 1 cut(s) 743
AcsI RAATTY 1 cut(s) 820
AcuI CTGAAG 1 cut(s) 597
AcyI GRCGYC 1 cut(s) 165
AfaI GTAC 5 cut(s) 76, 299, 386, 724, 779
AfiI CCNNNNNNNGG 1 cut(s) 187
AflII CTTAAG 2 cut(s) 443, 485
AflIII ACRYGT 1 cut(s) 42
AgsI TTSAA 1 cut(s) 928
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 4 cut(s) 10, 673, 745, 871
AluBI AGCT 2 cut(s) 697, 760
AluI AGCT 2 cut(s) 697, 760
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 3 cut(s) 149, 196, 299
AlwI GGATC 7 cut(s) 2, 15, 434, 447, 504, 585, 598
AoxI GGCC 4 cut(s) 108, 405, 743, 897
ApeKI GCWGC 2 cut(s) 26, 633
ApoI RAATTY 1 cut(s) 820
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
Asp700I GAANNNNTTC 1 cut(s) 582
Asp718I GGTACC 1 cut(s) 74
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 1 cut(s) 466
AvaII GGWCC 1 cut(s) 466
BaeGI GKGCMC 1 cut(s) 574
BalI TGGCCA 1 cut(s) 745
BamHI GGATCC 2 cut(s) 7, 590
BanI GGYRCC 2 cut(s) 74, 571
BanII GRGCYC 1 cut(s) 794
BauI CACGAG 1 cut(s) 510
BbsI GAAGAC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 282
BbvCI CCTCAGC 1 cut(s) 795
BbvI GCAGC 2 cut(s) 38, 620
BccI CCATC 6 cut(s) 31, 203, 232, 457, 536, 827
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 4 cut(s) 12, 675, 747, 873
BcoDI GTCTC 3 cut(s) 149, 196, 299
BfaI CTAG 1 cut(s) 587
BfmI CTRYAG 2 cut(s) 91, 609
BfrI CTTAAG 2 cut(s) 443, 485
BisI GCNGC 2 cut(s) 27, 634
BlsI GCNGC 2 cut(s) 28, 635
Bme1390I CCNGG 4 cut(s) 12, 675, 747, 873
Bme18I GGWCC 1 cut(s) 466
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 1 cut(s) 466
BmiI GGNNCC 6 cut(s) 9, 76, 468, 573, 592, 791
BmrFI CCNGG 4 cut(s) 12, 675, 747, 873
BmrI ACTGGG 1 cut(s) 778
BmsI GCATC 2 cut(s) 817, 850
BmuI ACTGGG 1 cut(s) 778
BoxI GACNNNNGTC 1 cut(s) 311
BpiI GAAGAC 1 cut(s) 159
BpmI CTGGAG 1 cut(s) 77
Bpu10I CCTNAGC 1 cut(s) 795
BsaHI GRCGYC 1 cut(s) 165
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 5 cut(s) 415, 673, 674, 807, 900
Bsc4I CCNNNNNNNGG 1 cut(s) 187
Bse118I RCCGGY 1 cut(s) 113
Bse1I ACTGG 4 cut(s) 60, 510, 773, 784
BseBI CCWGG 4 cut(s) 12, 675, 747, 873
BseDI CCNNGG 5 cut(s) 415, 673, 674, 807, 900
BseGI GGATG 3 cut(s) 195, 247, 832
BseLI CCNNNNNNNGG 1 cut(s) 187
BseMII CTCAG 1 cut(s) 809
BseNI ACTGG 4 cut(s) 60, 510, 773, 784
BseSI GKGCMC 1 cut(s) 574
BseXI GCAGC 2 cut(s) 38, 620
Bsh1236I CGCG 3 cut(s) 44, 186, 216
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 4 cut(s) 110, 407, 745, 899
BshNI GGYRCC 2 cut(s) 74, 571
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 282
BsiSI CCGG 1 cut(s) 114
BslFI GGGAC 1 cut(s) 152
BslI CCNNNNNNNGG 1 cut(s) 187
BsmAI GTCTC 3 cut(s) 149, 196, 299
BsmBI CGTCTC 1 cut(s) 149
BsmFI GGGAC 1 cut(s) 152
BsnI GGCC 4 cut(s) 110, 407, 745, 899
Bso31I GGTCTC 1 cut(s) 196
Bsp1286I GDGCHC 3 cut(s) 282, 574, 794
Bsp143I GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
Bsp19I CCATGG 1 cut(s) 900
BspACI CCGC 3 cut(s) 184, 214, 494
BspANI GGCC 4 cut(s) 110, 407, 745, 899
BspCNI CTCAG 1 cut(s) 808
BspFNI CGCG 3 cut(s) 44, 186, 216
BspHI TCATGA 2 cut(s) 544, 762
BspLI GGNNCC 6 cut(s) 9, 76, 468, 573, 592, 791
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 7 cut(s) 2, 15, 434, 447, 504, 585, 598
BspT107I GGYRCC 2 cut(s) 74, 571
BspTI CTTAAG 2 cut(s) 443, 485
BspTNI GGTCTC 1 cut(s) 196
BsrFI RCCGGY 1 cut(s) 113
BsrI ACTGG 4 cut(s) 60, 510, 773, 784
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 5 cut(s) 415, 673, 674, 807, 900
BssMI GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
BssNAI GTATAC 1 cut(s) 540
BssNI GRCGYC 1 cut(s) 165
BssSI CACGAG 1 cut(s) 510
BssT1I CCWWGG 2 cut(s) 807, 900
Bst1107I GTATAC 1 cut(s) 540
Bst2BI CACGAG 1 cut(s) 510
Bst2UI CCWGG 4 cut(s) 12, 675, 747, 873
Bst4CI ACNGT 3 cut(s) 277, 393, 419
Bst6I CTCTTC 1 cut(s) 674
BstACI GRCGYC 1 cut(s) 165
BstAFI CTTAAG 2 cut(s) 443, 485
BstC8I GCNNGC 3 cut(s) 206, 663, 758
BstDEI CTNAG 1 cut(s) 795
BstDSI CCRYGG 2 cut(s) 415, 900
BstENI CCTNNNNNAGG 1 cut(s) 185
BstF5I GGATG 3 cut(s) 195, 247, 832
BstFNI CGCG 3 cut(s) 44, 186, 216
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 7 cut(s) 10, 24, 123, 429, 442, 499, 593
BstMAI GTCTC 3 cut(s) 149, 196, 299
BstMBI GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 41, 868, 896
BstNI CCWGG 4 cut(s) 12, 675, 747, 873
BstNSI RCATGY 1 cut(s) 208
BstPAI GACNNNNGTC 1 cut(s) 311
BstSCI CCNGG 4 cut(s) 10, 673, 745, 871
BstSFI CTRYAG 2 cut(s) 91, 609
BstSLI GKGCMC 1 cut(s) 574
BstUI CGCG 3 cut(s) 44, 186, 216
BstV1I GCAGC 2 cut(s) 38, 620
BstV2I GAAGAC 1 cut(s) 159
BstX2I RGATCY 5 cut(s) 7, 426, 439, 496, 590
BstXI CCANNNNNNTGG 1 cut(s) 422
BstYI RGATCY 5 cut(s) 7, 426, 439, 496, 590
BstZ17I GTATAC 1 cut(s) 540
BsuRI GGCC 4 cut(s) 110, 407, 745, 899
BtgI CCRYGG 2 cut(s) 415, 900
BtgZI GCGATG 1 cut(s) 50
BtrI CACGTC 1 cut(s) 226
BtsCI GGATG 3 cut(s) 195, 247, 832
BtsIMutI CAGTG 1 cut(s) 791
Cac8I GCNNGC 3 cut(s) 206, 663, 758
CciI TCATGA 2 cut(s) 544, 762
CfoI GCGC 1 cut(s) 204
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 466
CseI GACGC 3 cut(s) 18, 50, 154
Csp6I GTAC 5 cut(s) 75, 298, 385, 723, 778
CviAII CATG 8 cut(s) 205, 301, 422, 545, 739, 763, 773, 901
CviQI GTAC 5 cut(s) 75, 298, 385, 723, 778
DdeI CTNAG 1 cut(s) 795
DpnI GATC 7 cut(s) 9, 23, 122, 428, 441, 498, 592
DpnII GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
DrdI GACNNNNNNGTC 1 cut(s) 224
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 743
Eam1104I CTCTTC 1 cut(s) 674
EarI CTCTTC 1 cut(s) 674
Eco130I CCWWGG 2 cut(s) 807, 900
Eco24I GRGCYC 1 cut(s) 794
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 1 cut(s) 466
Eco57I CTGAAG 1 cut(s) 597
EcoNI CCTNNNNNAGG 1 cut(s) 185
EcoRII CCWGG 4 cut(s) 10, 673, 745, 871
EcoT14I CCWWGG 2 cut(s) 807, 900
EcoT38I GRGCYC 1 cut(s) 794
ErhI CCWWGG 2 cut(s) 807, 900
Esp3I CGTCTC 1 cut(s) 149
FaeI CATG 8 cut(s) 208, 304, 425, 548, 742, 766, 776, 904
FaqI GGGAC 1 cut(s) 152
FatI CATG 8 cut(s) 204, 300, 421, 544, 738, 762, 772, 900
FauI CCCGC 1 cut(s) 221
FblI GTMKAC 2 cut(s) 90, 539
Fnu4HI GCNGC 2 cut(s) 27, 634
FokI GGATG 3 cut(s) 182, 254, 839
FriOI GRGCYC 1 cut(s) 794
Fsp4HI GCNGC 2 cut(s) 27, 634
FspBI CTAG 1 cut(s) 587
FspI TGCGCA 1 cut(s) 203
GlaI GCGC 1 cut(s) 203
GluI GCNGC 2 cut(s) 27, 634
GsuI CTGGAG 1 cut(s) 77
HaeIII GGCC 4 cut(s) 110, 407, 745, 899
HapII CCGG 1 cut(s) 114
HgaI GACGC 3 cut(s) 18, 50, 154
HhaI GCGC 1 cut(s) 204
Hin1I GRCGYC 1 cut(s) 165
Hin1II CATG 8 cut(s) 208, 304, 425, 548, 742, 766, 776, 904
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HinfI GANTC 3 cut(s) 139, 376, 680
HpaII CCGG 1 cut(s) 114
Hpy166II GTNNAC 2 cut(s) 91, 540
Hpy188I TCNGA 5 cut(s) 68, 381, 462, 685, 853
Hpy188III TCNNGA 6 cut(s) 49, 316, 345, 532, 545, 763
Hpy8I GTNNAC 2 cut(s) 91, 540
Hpy99I CGWCG 4 cut(s) 22, 34, 128, 230
HpyAV CCTTC 9 cut(s) 55, 65, 79, 100, 155, 260, 418, 593, 889
HpyCH4III ACNGT 3 cut(s) 277, 393, 419
HpyCH4IV ACGT 1 cut(s) 225
HpyCH4V TGCA 6 cut(s) 396, 611, 636, 691, 841, 862
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 41, 868, 896
HpyF3I CTNAG 1 cut(s) 795
HpySE526I ACGT 1 cut(s) 225
Hsp92I GRCGYC 1 cut(s) 165
Hsp92II CATG 8 cut(s) 208, 304, 425, 548, 742, 766, 776, 904
HspAI GCGC 1 cut(s) 202
KpnI GGTACC 1 cut(s) 78
Kzo9I GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
LmnI GCTCC 4 cut(s) 14, 367, 702, 789
Lsp1109I GCAGC 2 cut(s) 38, 620
LweI GCATC 2 cut(s) 817, 850
MaeI CTAG 1 cut(s) 587
MaeII ACGT 1 cut(s) 225
MaeIII GTNAC 1 cut(s) 652
MalI GATC 7 cut(s) 9, 23, 122, 428, 441, 498, 592
MboI GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
MboII GAAGA 4 cut(s) 164, 170, 449, 661
MflI RGATCY 5 cut(s) 7, 426, 439, 496, 590
MhlI GDGCHC 3 cut(s) 282, 574, 794
MlsI TGGCCA 1 cut(s) 745
MluCI AATT 1 cut(s) 820
MluI ACGCGT 1 cut(s) 42
MluNI TGGCCA 1 cut(s) 745
MlyI GAGTC 2 cut(s) 133, 385
MmeI TCCRAC 2 cut(s) 46, 831
MnlI CCTC 6 cut(s) 180, 181, 191, 231, 459, 804
Mox20I TGGCCA 1 cut(s) 745
MroXI GAANNNNTTC 1 cut(s) 582
MscI TGGCCA 1 cut(s) 745
MseI TTAA 3 cut(s) 372, 444, 486
MslI CAYNNNNRTG 1 cut(s) 420
Msp20I TGGCCA 1 cut(s) 745
MspCI CTTAAG 2 cut(s) 443, 485
MspI CCGG 1 cut(s) 114
MspR9I CCNGG 4 cut(s) 12, 675, 747, 873
MvaI CCWGG 4 cut(s) 12, 675, 747, 873
MvnI CGCG 3 cut(s) 44, 186, 216
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 41, 868, 896
NcoI CCATGG 1 cut(s) 900
NdeII GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
NlaIII CATG 8 cut(s) 208, 304, 425, 548, 742, 766, 776, 904
NlaIV GGNNCC 6 cut(s) 9, 76, 468, 573, 592, 791
NmuCI GTSAC 1 cut(s) 652
NsbI TGCGCA 1 cut(s) 203
NspI RCATGY 1 cut(s) 208
PaeI GCATGC 1 cut(s) 208
PagI TCATGA 2 cut(s) 544, 762
PasI CCCWGGG 1 cut(s) 674
PcsI WCGNNNNNNNCGW 3 cut(s) 26, 162, 334
PdmI GAANNNNTTC 1 cut(s) 582
PfeI GAWTC 1 cut(s) 680
PfoI TCCNGGA 1 cut(s) 10
PkrI GCNGC 2 cut(s) 28, 635
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 2 cut(s) 133, 384
PpsI GAGTC 2 cut(s) 133, 384
PshAI GACNNNNGTC 1 cut(s) 311
Psp6I CCWGG 4 cut(s) 10, 673, 745, 871
PspGI CCWGG 4 cut(s) 10, 673, 745, 871
PspN4I GGNNCC 6 cut(s) 9, 76, 468, 573, 592, 791
PspPI GGNCC 1 cut(s) 466
PstI CTGCAG 1 cut(s) 613
PsuI RGATCY 5 cut(s) 7, 426, 439, 496, 590
PvuI CGATCG 1 cut(s) 24
RsaI GTAC 5 cut(s) 76, 299, 386, 724, 779
RsaNI GTAC 5 cut(s) 75, 298, 385, 723, 778
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 3 cut(s) 372, 444, 486
SatI GCNGC 2 cut(s) 27, 634
Sau3AI GATC 7 cut(s) 7, 21, 120, 426, 439, 496, 590
Sau96I GGNCC 1 cut(s) 466
SchI GAGTC 2 cut(s) 133, 385
ScrFI CCNGG 4 cut(s) 12, 675, 747, 873
SduI GDGCHC 3 cut(s) 282, 574, 794
SfaNI GCATC 2 cut(s) 817, 850
SfcI CTRYAG 2 cut(s) 91, 609
SinI GGWCC 1 cut(s) 466
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 2 cut(s) 443, 485
SmoI CTYRAG 2 cut(s) 443, 485
SphI GCATGC 1 cut(s) 208
Sse9I AATT 1 cut(s) 820
SsiI CCGC 3 cut(s) 184, 214, 494
SspMI CTAG 1 cut(s) 587
StyD4I CCNGG 4 cut(s) 10, 673, 745, 871
StyI CCWWGG 2 cut(s) 807, 900
TaaI ACNGT 3 cut(s) 277, 393, 419
TaiI ACGT 1 cut(s) 228
TaqI TCGA 2 cut(s) 48, 605
TasI AATT 1 cut(s) 820
TatI WGTACW 1 cut(s) 297
TfiI GAWTC 1 cut(s) 680
Tru1I TTAA 3 cut(s) 372, 444, 486
Tru9I TTAA 3 cut(s) 372, 444, 486
TscAI CASTG 1 cut(s) 791
TseFI GTSAC 1 cut(s) 652
TseI GCWGC 2 cut(s) 26, 633
Tsp45I GTSAC 1 cut(s) 652
TspDTI ATGAA 2 cut(s) 747, 779
TspRI CASTG 1 cut(s) 791
Vha464I CTTAAG 2 cut(s) 443, 485
VpaK11BI GGWCC 1 cut(s) 466
XagI CCTNNNNNAGG 1 cut(s) 185
XapI RAATTY 1 cut(s) 820
XceI RCATGY 1 cut(s) 208
XmiI GTMKAC 2 cut(s) 90, 539
XmnI GAANNNNTTC 1 cut(s) 582
XspI CTAG 1 cut(s) 587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.