RLG00000002503
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
35351318 .. 35353029
1712 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002503

Sequence Viewer

Length: 873 bp
ATGGAGAAGGCAGGAGGAGCGATCGCAGTGTCGGCTATGGACGCGTTCGAGAAACTGGAGAAGGTCGGAGAAGGGACCTACGGCAAGGTTTACAGAGCCAGAGAGAAGGCCACCGGCAAGATCGTCGCCCTCAAAAAGACTCGTCTCCATGAGGACGAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTCTCCATTTTGCGCATGCTCTCCCGCGACCCGCACGTCGTCAGGTTGATGGATGTGAAGCAAGGCACGAATAAGGAAGGCAAGACTGTGCTCTACTTGGTGTTTGAGTACATGGAAACTGATGTCAAGAAATACATTCGCAGTTTCCGTCAAACTGGAGAAATGATTCCTGCTCCCGTCGTTAAGCCTCACAATCTTCTGATGGACCGCAAGAGTATGATCCTTAAGATTGCGGATCTTGGACTGGCTCGAGCATTTACTCTGCCCATCAAGAAGTATACGCATGAGATATTGACCCTTTGGTATAGGGCACCTGAAGTTCTTCTGGGATCCACACATTACTCAACTGCAGTGGATATTTGGTCTGTCGGCTGCATATTTGCTGAACTTGTCACAAAGCAAGCACTCTTCCCTGGGGATTCTGAACTGCAGCAGCTCCTACATATATTCAGGTTGTTGGGTACTCCAAATGAGACAGTGTGGCCAGGTGTAAGCAAACTCATGAACTGGCATGAGTACCCCCAGTGGAGCCCTCAGAGTTTGTCCAAAGCTGTTCCGAATTTGGATTCTGATGGGTTGCATCTGTTGTCGGAAATGTTGCAATATGAGCCTGGAAAACGCATTTCGGCAAAGAAGGCTATGGAACACCCTTACTTTGATGATTTGAACAAAGCTGGTCTCTGA

Protein Analysis

291

Amino Acids

32.82

Weight (kDa)

8.89

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 110 5.7e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 111 4.8e-08 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 124 - 282 3.2e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 127 - 196 2e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
Acc16I TGCGCA 1 cut(s) 203
AccB1I GGYRCC 1 cut(s) 499
AccI GTMKAC 1 cut(s) 467
AccII CGCG 3 cut(s) 44, 186, 216
AciI CCGC 5 cut(s) 184, 214, 221, 397, 422
AclWI GGATC 4 cut(s) 403, 432, 513, 526
AcoI YGGCCR 1 cut(s) 671
AcsI RAATTY 1 cut(s) 748
AcuI CTGAAG 1 cut(s) 525
AcyI GRCGYC 1 cut(s) 165
AfaI GTAC 3 cut(s) 299, 652, 707
AflII CTTAAG 1 cut(s) 413
AflIII ACRYGT 1 cut(s) 42
AgsI TTSAA 1 cut(s) 856
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 3 cut(s) 601, 673, 799
AluBI AGCT 3 cut(s) 625, 740, 863
AluI AGCT 3 cut(s) 625, 740, 863
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 3 cut(s) 149, 196, 656
AlwI GGATC 4 cut(s) 403, 432, 513, 526
Ama87I CYCGRG 1 cut(s) 438
AoxI GGCC 2 cut(s) 108, 671
ApeKI GCWGC 3 cut(s) 561, 619, 622
ApoI RAATTY 1 cut(s) 748
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
AsiSI GCGATCGC 1 cut(s) 24
Asp700I GAANNNNTTC 2 cut(s) 354, 510
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 2 cut(s) 75, 394
AvaI CYCGRG 1 cut(s) 438
AvaII GGWCC 2 cut(s) 75, 394
BaeGI GKGCMC 1 cut(s) 502
BalI TGGCCA 1 cut(s) 673
BamHI GGATCC 1 cut(s) 518
BanI GGYRCC 1 cut(s) 499
BanII GRGCYC 1 cut(s) 722
Bbv12I GWGCWC 1 cut(s) 282
BbvI GCAGC 3 cut(s) 548, 631, 634
BccI CCATC 4 cut(s) 232, 385, 464, 755
BceAI ACGGC 1 cut(s) 97
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 3 cut(s) 603, 675, 801
BcoDI GTCTC 3 cut(s) 149, 196, 656
BfmI CTRYAG 2 cut(s) 537, 617
BfrI CTTAAG 1 cut(s) 413
BisI GCNGC 3 cut(s) 562, 620, 623
BlsI GCNGC 3 cut(s) 563, 621, 624
Bme1390I CCNGG 3 cut(s) 603, 675, 801
Bme18I GGWCC 2 cut(s) 75, 394
BmeT110I CYCGRG 1 cut(s) 438
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 2 cut(s) 75, 394
BmiI GGNNCC 4 cut(s) 76, 501, 520, 719
BmrFI CCNGG 3 cut(s) 603, 675, 801
BmrI ACTGGG 1 cut(s) 706
BmsI GCATC 1 cut(s) 778
BmuI ACTGGG 1 cut(s) 706
BpmI CTGGAG 2 cut(s) 77, 366
BsaHI GRCGYC 1 cut(s) 165
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 2 cut(s) 601, 602
Bse118I RCCGGY 1 cut(s) 113
Bse1I ACTGG 5 cut(s) 60, 349, 438, 701, 712
BseBI CCWGG 3 cut(s) 603, 675, 801
BseDI CCNNGG 2 cut(s) 601, 602
BseGI GGATG 1 cut(s) 247
BseMII CTCAG 1 cut(s) 737
BseNI ACTGG 5 cut(s) 60, 349, 438, 701, 712
BseRI GAGGAG 1 cut(s) 30
BseSI GKGCMC 1 cut(s) 502
BseXI GCAGC 3 cut(s) 548, 631, 634
Bsh1236I CGCG 3 cut(s) 44, 186, 216
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 2 cut(s) 110, 673
BshNI GGYRCC 1 cut(s) 499
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 282
BsiHKCI CYCGRG 1 cut(s) 438
BsiSI CCGG 1 cut(s) 114
BslFI GGGAC 2 cut(s) 88, 152
BsmAI GTCTC 3 cut(s) 149, 196, 656
BsmBI CGTCTC 1 cut(s) 149
BsmFI GGGAC 2 cut(s) 88, 152
BsnI GGCC 2 cut(s) 110, 673
Bso31I GGTCTC 1 cut(s) 196
BsoBI CYCGRG 1 cut(s) 438
Bsp1286I GDGCHC 3 cut(s) 282, 502, 722
Bsp143I GATC 5 cut(s) 21, 120, 408, 424, 518
BspACI CCGC 5 cut(s) 184, 214, 221, 397, 422
BspANI GGCC 2 cut(s) 110, 673
BspCNI CTCAG 1 cut(s) 736
BspFNI CGCG 3 cut(s) 44, 186, 216
BspHI TCATGA 1 cut(s) 690
BspLI GGNNCC 4 cut(s) 76, 501, 520, 719
BspMAI CTGCAG 2 cut(s) 541, 621
BspPI GGATC 4 cut(s) 403, 432, 513, 526
BspT107I GGYRCC 1 cut(s) 499
BspTI CTTAAG 1 cut(s) 413
BspTNI GGTCTC 1 cut(s) 196
BsrFI RCCGGY 1 cut(s) 113
BsrI ACTGG 5 cut(s) 60, 349, 438, 701, 712
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 2 cut(s) 601, 602
BssMI GATC 5 cut(s) 21, 120, 408, 424, 518
BssNAI GTATAC 1 cut(s) 468
BssNI GRCGYC 1 cut(s) 165
Bst1107I GTATAC 1 cut(s) 468
Bst2UI CCWGG 3 cut(s) 603, 675, 801
Bst4CI ACNGT 2 cut(s) 277, 667
Bst6I CTCTTC 1 cut(s) 602
BstACI GRCGYC 1 cut(s) 165
BstAFI CTTAAG 1 cut(s) 413
BstC8I GCNNGC 2 cut(s) 206, 591
BstDEI CTNAG 1 cut(s) 723
BstF5I GGATG 1 cut(s) 247
BstFNI CGCG 3 cut(s) 44, 186, 216
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 5 cut(s) 24, 123, 411, 427, 521
BstMAI GTCTC 3 cut(s) 149, 196, 656
BstMBI GATC 5 cut(s) 21, 120, 408, 424, 518
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 5 cut(s) 17, 32, 41, 796, 824
BstNI CCWGG 3 cut(s) 603, 675, 801
BstNSI RCATGY 1 cut(s) 208
BstSCI CCNGG 3 cut(s) 601, 673, 799
BstSFI CTRYAG 2 cut(s) 537, 617
BstSLI GKGCMC 1 cut(s) 502
BstUI CGCG 3 cut(s) 44, 186, 216
BstV1I GCAGC 3 cut(s) 548, 631, 634
BstX2I RGATCY 2 cut(s) 424, 518
BstYI RGATCY 2 cut(s) 424, 518
BstZ17I GTATAC 1 cut(s) 468
BsuRI GGCC 2 cut(s) 110, 673
BtrI CACGTC 1 cut(s) 226
BtsCI GGATG 1 cut(s) 247
BtsI GCAGTG 2 cut(s) 33, 546
BtsIMutI CAGTG 4 cut(s) 33, 546, 672, 719
Cac8I GCNNGC 2 cut(s) 206, 591
CciI TCATGA 1 cut(s) 690
CfoI GCGC 1 cut(s) 204
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 2 cut(s) 75, 394
CseI GACGC 2 cut(s) 50, 154
Csp6I GTAC 3 cut(s) 298, 651, 706
CspCI CAANNNNNGTGG 2 cut(s) 522, 557
CviAII CATG 6 cut(s) 149, 205, 301, 473, 691, 701
CviQI GTAC 3 cut(s) 298, 651, 706
DdeI CTNAG 1 cut(s) 723
DpnI GATC 5 cut(s) 23, 122, 410, 426, 520
DpnII GATC 5 cut(s) 21, 120, 408, 424, 518
DrdI GACNNNNNNGTC 1 cut(s) 224
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 671
Eam1104I CTCTTC 1 cut(s) 602
EarI CTCTTC 1 cut(s) 602
Eco24I GRGCYC 1 cut(s) 722
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 2 cut(s) 75, 394
Eco57I CTGAAG 1 cut(s) 525
Eco88I CYCGRG 1 cut(s) 438
EcoO109I RGGNCCY 1 cut(s) 75
EcoRII CCWGG 3 cut(s) 601, 673, 799
EcoT38I GRGCYC 1 cut(s) 722
Esp3I CGTCTC 1 cut(s) 149
FaeI CATG 6 cut(s) 152, 208, 304, 476, 694, 704
FaqI GGGAC 2 cut(s) 88, 152
FatI CATG 6 cut(s) 148, 204, 300, 472, 690, 700
FauI CCCGC 2 cut(s) 221, 228
FblI GTMKAC 1 cut(s) 467
Fnu4HI GCNGC 3 cut(s) 562, 620, 623
FokI GGATG 1 cut(s) 254
FriOI GRGCYC 1 cut(s) 722
Fsp4HI GCNGC 3 cut(s) 562, 620, 623
FspI TGCGCA 1 cut(s) 203
GlaI GCGC 1 cut(s) 203
GluI GCNGC 3 cut(s) 562, 620, 623
GsuI CTGGAG 2 cut(s) 77, 366
HaeIII GGCC 2 cut(s) 110, 673
HapII CCGG 1 cut(s) 114
HgaI GACGC 2 cut(s) 50, 154
HhaI GCGC 1 cut(s) 204
Hin1I GRCGYC 1 cut(s) 165
Hin1II CATG 6 cut(s) 152, 208, 304, 476, 694, 704
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HinfI GANTC 4 cut(s) 139, 355, 608, 755
HpaII CCGG 1 cut(s) 114
Hpy166II GTNNAC 2 cut(s) 91, 468
Hpy188I TCNGA 8 cut(s) 68, 390, 613, 726, 747, 760, 781, 872
Hpy188III TCNNGA 4 cut(s) 49, 316, 460, 691
Hpy8I GTNNAC 2 cut(s) 91, 468
Hpy99I CGWCG 3 cut(s) 128, 230, 371
HpyAV CCTTC 6 cut(s) 55, 65, 100, 155, 260, 817
HpyCH4III ACNGT 2 cut(s) 277, 667
HpyCH4IV ACGT 1 cut(s) 225
HpyCH4V TGCA 5 cut(s) 539, 564, 619, 769, 790
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 32, 41, 796, 824
HpyF3I CTNAG 1 cut(s) 723
HpySE526I ACGT 1 cut(s) 225
Hsp92I GRCGYC 1 cut(s) 165
Hsp92II CATG 6 cut(s) 152, 208, 304, 476, 694, 704
HspAI GCGC 1 cut(s) 202
Kzo9I GATC 5 cut(s) 21, 120, 408, 424, 518
LmnI GCTCC 4 cut(s) 17, 367, 630, 717
Lsp1109I GCAGC 3 cut(s) 548, 631, 634
LweI GCATC 1 cut(s) 778
MaeII ACGT 1 cut(s) 225
MaeIII GTNAC 1 cut(s) 580
MalI GATC 5 cut(s) 23, 122, 410, 426, 520
MboI GATC 5 cut(s) 21, 120, 408, 424, 518
MboII GAAGA 4 cut(s) 170, 377, 503, 589
MflI RGATCY 2 cut(s) 424, 518
MhlI GDGCHC 3 cut(s) 282, 502, 722
MlsI TGGCCA 1 cut(s) 673
MluCI AATT 1 cut(s) 748
MluI ACGCGT 1 cut(s) 42
MluNI TGGCCA 1 cut(s) 673
MlyI GAGTC 1 cut(s) 133
MmeI TCCRAC 2 cut(s) 46, 759
MnlI CCTC 7 cut(s) 8, 140, 145, 180, 181, 387, 732
Mox20I TGGCCA 1 cut(s) 673
MroXI GAANNNNTTC 2 cut(s) 354, 510
MscI TGGCCA 1 cut(s) 673
MseI TTAA 2 cut(s) 372, 414
Msp20I TGGCCA 1 cut(s) 673
MspCI CTTAAG 1 cut(s) 413
MspI CCGG 1 cut(s) 114
MspR9I CCNGG 3 cut(s) 603, 675, 801
MvaI CCWGG 3 cut(s) 603, 675, 801
MvnI CGCG 3 cut(s) 44, 186, 216
MwoI GCNNNNNNNGC 5 cut(s) 17, 32, 41, 796, 824
NdeII GATC 5 cut(s) 21, 120, 408, 424, 518
NlaIII CATG 6 cut(s) 152, 208, 304, 476, 694, 704
NlaIV GGNNCC 4 cut(s) 76, 501, 520, 719
NmuCI GTSAC 1 cut(s) 580
NsbI TGCGCA 1 cut(s) 203
NspI RCATGY 1 cut(s) 208
PaeI GCATGC 1 cut(s) 208
PaeR7I CTCGAG 1 cut(s) 438
PagI TCATGA 1 cut(s) 690
PasI CCCWGGG 1 cut(s) 602
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 334
PdmI GAANNNNTTC 2 cut(s) 354, 510
PfeI GAWTC 3 cut(s) 355, 608, 755
PkrI GCNGC 3 cut(s) 563, 621, 624
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 1 cut(s) 133
PpsI GAGTC 1 cut(s) 133
PpuMI RGGWCCY 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 75
Psp6I CCWGG 3 cut(s) 601, 673, 799
PspGI CCWGG 3 cut(s) 601, 673, 799
PspN4I GGNNCC 4 cut(s) 76, 501, 520, 719
PspPI GGNCC 2 cut(s) 75, 394
PspPPI RGGWCCY 1 cut(s) 75
PspXI VCTCGAGB 1 cut(s) 438
PstI CTGCAG 2 cut(s) 541, 621
PsuI RGATCY 2 cut(s) 424, 518
PvuI CGATCG 1 cut(s) 24
RgaI GCGATCGC 1 cut(s) 24
RsaI GTAC 3 cut(s) 299, 652, 707
RsaNI GTAC 3 cut(s) 298, 651, 706
SaqAI TTAA 2 cut(s) 372, 414
SatI GCNGC 3 cut(s) 562, 620, 623
Sau3AI GATC 5 cut(s) 21, 120, 408, 424, 518
Sau96I GGNCC 2 cut(s) 75, 394
SchI GAGTC 1 cut(s) 133
ScrFI CCNGG 3 cut(s) 603, 675, 801
SduI GDGCHC 3 cut(s) 282, 502, 722
SfaAI GCGATCGC 1 cut(s) 24
SfaNI GCATC 1 cut(s) 778
SfcI CTRYAG 2 cut(s) 537, 617
Sfr274I CTCGAG 1 cut(s) 438
SgfI GCGATCGC 1 cut(s) 24
SinI GGWCC 2 cut(s) 75, 394
SlaI CTCGAG 1 cut(s) 438
SmlI CTYRAG 2 cut(s) 413, 438
SmoI CTYRAG 2 cut(s) 413, 438
SphI GCATGC 1 cut(s) 208
Sse9I AATT 1 cut(s) 748
SsiI CCGC 5 cut(s) 184, 214, 221, 397, 422
StyD4I CCNGG 3 cut(s) 601, 673, 799
TaaI ACNGT 2 cut(s) 277, 667
TaiI ACGT 1 cut(s) 228
TaqI TCGA 2 cut(s) 48, 439
TasI AATT 1 cut(s) 748
TatI WGTACW 1 cut(s) 297
TfiI GAWTC 3 cut(s) 355, 608, 755
Tru1I TTAA 2 cut(s) 372, 414
Tru9I TTAA 2 cut(s) 372, 414
TscAI CASTG 4 cut(s) 33, 546, 672, 719
TseFI GTSAC 1 cut(s) 580
TseI GCWGC 3 cut(s) 561, 619, 622
Tsp45I GTSAC 1 cut(s) 580
TspDTI ATGAA 1 cut(s) 707
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 4 cut(s) 33, 546, 672, 719
Vha464I CTTAAG 1 cut(s) 413
VpaK11BI GGWCC 2 cut(s) 75, 394
XapI RAATTY 1 cut(s) 748
XceI RCATGY 1 cut(s) 208
XhoI CTCGAG 1 cut(s) 438
XmiI GTMKAC 1 cut(s) 467
XmnI GAANNNNTTC 2 cut(s) 354, 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.