AT1G80680

Nuclear protein 96

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004174
Physical Location & Seq
Forward (+)
30323882 .. 30328880
4999 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G80680.1

Sequence Viewer

Length: 3141 bp
ATGACGTCTCTTTCTATTCAACCATTTCCAGAGATTTCAAGGATGGCTAGAGATTTGGACTCGCGAAAGAAAAGAAGGATCTCTTTAGATGGAATTGCTGCCTTGTGTGAGCATTCCAAAGAGATCATTGATTCATTGCCTATGTTGAATTCTCCTGACTACTTCTTGAAGCCATGTATAAACGAGCTGGTTGAGCGAGAAATTGAAAGCCCTGATTATTGCAGCCGGGTTCCTGATTTTACTATTGGCAGGATTGGTTACGGTTATATTAGGTTTCTTGGAAACACGGATGTTAGAAGGTTGGACCTGGATCACATAGTTAAGTTTCATAGGCACGAGGTTATTGTTTATGATGATGAGAGCTCCAAGCCGGTTGTTGGTGAGGGACTTAACAAGGCTGCTGAGGTGACTCTGGTCGTAAACATACCAGATCTAACTTGGGGAAAACAGCAAGTTAACCATATTGCTTATAAATTGAAACAGAGCACGGAAAGACAAGGAGCAACTTTCATCTCATTTGATCCCGATAATGGTTTATGGAAGTTCTTCGTTCCTCATTTCAGCAGATTTGGGTTGAGTGATGATGAGGCAGAAGATATTGCAATGGATGATGCGCCAGGTTTGGGAGATCCCGTAGGACTGGATGGTAAAAAGGTAGCTGACATTGATGAAGAAGATCAGATGGAAACTTCGGAGCTAGAGCTTTCTCATTCTCTCCCAGCTCATTTAGGACTTGATCCTGAAAAGATGAAAGAAATGAGAATGCTGATGTTTCCTAATGAAGATGAAGACGAAAGTGAGGACTTTAGAGAGCAAACTTCCCATCTTATGACATCCTTGACTAAACGAAATGTAAGACCTTCGCAGAAAATTGCTCAAAGAAATAGTCATCAAGACCCTCCACCGGTCGTGCGCAAAACTCCGCTTGCTTTGCTGGAGTATAACCCTGGTAATGATAAAAGCTCCCCAGGTAGTATCCTGATGGTACAACAAAATAAGAATTTGGCAGTGAGAAAGTCGAAAACGGGAGGTTTCGAGCTGGACATCAGCCATGTCACACCGTTAACTGATAACTATTCCCGCAATGTTGTTGATGCAGCATTATTCATGGGAAGATCGTTCCGAGCAGGTTGGGGCCCAAATGGCGTTCTTTTTCACACTGGTAAGCCAATATGTAGCTCCAGTTCCCAGATGGTATTGTCTTCTGTGATCAATAAAGAAAAGATAGCAATTGACAAAGTGGTTTGGGATAGAAAGGGAAAAGTTCAGAAAGAACTTATTGATTCTGCGTTTGAGGCTCCCTTAAGTCTCCACAAGGAATTGAATCATGTAGAAGAAGAAGTTAGGTTTGGCTCTTTCAGTCTTAAACTTCAGAATGTTGTCACCGATCGTGTAGTTCTTTCAGATATCTGCCGAAGTTATATTGGTATAATCGAGAAACAGCTGGAAGTTGCTGGGTTGTCCACATCTGCGAAGCTGTTTTTAATGCACCAAGTCATGGTCTGGGAACTCATAAAAGTTCTCTTTTCTGAGAGACAGAGTACTGAACGTTTGATGTATGCAGCTTCTGATAACGAGGAAGACGTGATGCAGGATGTGAAGGAAGATTCTGCAAAAATTGATACAGAAGCTCTTCCGCTTATCCGAAGAGCAGAATTCAGTTGTTGGCTCCAAGAAAGTGTCAGTCACCGTGTACAAGAAGATGTGAGTGATCTAAATGGTTCTAGCTACCTTGAGCACTTATTCTTTCTTCTAACTGGACGAGAGCTTGATTCAGCTGTGGAACTTGCCATATCTAAGGGAGATGTTAGACTTGCTTGTTTGTTGAGCCAGGCTGGTGGATCAACTGTAAACCGCAATGATATCTTGCAGCAGCTTCACCTTTGGAGAAGGAATGGGCTGGATTTTAATTTCATTGAGAAGGAGAGAATTAAGCTTTACGAATTGCTTGCTGGTAATATCCATGATGCGTTACAAGATTTTACAATTGACTGGAAGAGATTCCTAGGGTTGTTAATGTGGCATCATCTACCTCCCGACAGTTCATTACCTATCATCTTCAGAAGCTATCAGCTCCTACTAAATCAGGCAAAAGCTCCGTGGCCCGTCCCAATATATATTGATGAAGGACCTGCAGATGGGTTTGTAAGCGACAACAAGCATTCTGACATCTTGTATTATCTTATGCTTCTACACAGCAAAGAAGAGGAAGAATTTGGTTTCCTGCAGACTATGTTCAGTGCCTTCTCTTCAACTGATGATCCACTTGACTATCATATGATCTGGCACCACCGAGGAATTCTAGAAGCAGTTGGAGCTTTCACTTCAGATGATCTTCACACTCTAGATATGGGATTTGTTGCACAGCTTCTCTCTCAGGGCCTTTGTCATTGGGCTATCTACGTTGTTCTTCACATACCCTTCCGTGAAGATCATCCATATCTACACGTCACTGTCATTCGGGAAATCCTGTTTCAATACTGTGAAACTTGGAGTTCTATGGAATCACAACGGCAATTTATCAAGGACTTGGGTATCCCTTCTGAATGGATGCACGAAGCTCTGGCAGTTTATTACAATTACCATGGAGATTTCGTAAAGGCTCTTGACCAGTTTATTGAATGCGCAAACTGGCAAAGAGCTCATTCCATTTTTATGACGTCAGTTGCTCATTCATTGTTTTTGTCAGCTAACCATTCAGAAATCTGGAGAATTGCTACTTCAATGGATGATCGCAAGTCTGAGATTGAAAACTGGGATTTGGGTGCTGGGATTTACATGTCATTCTATTTACTAAAGAGTTCACTGCAAGAAGATGCTGATACGATGGTAGAACTGGAACCCCTTGATAGCACAAACGAGTCTTGCAGAAATTTTGTCGGTCGTTTAAACGAATCATTGGCTGTTTGGGGTGACAGATTACCAGTTGAAGCAAGAGTCGCATACTCAAAGATGGCTGAGGAAATATGCGATTTACTTCTGTCAGATCTGAGTAAGAATCCAAGCCGAGAGACTCAGCTAACATGCTTTGAGACAGCCTTTGATGCCCCTTTGCCAGAAGATGTAAGATCAACACATCTGCAAGACGCTGTGTCACTCTTCTCTCTATATCTCTCAGAGACGGGCCAAATCTCAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0007154 GO:0007165 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009733 GO:0009870 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015267 GO:0015288 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0022803 GO:0022829 GO:0022857 GO:0023052 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045088 GO:0045089 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0055085 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2 Nup96

Protein Analysis

1046

Amino Acids

119.15

Weight (kDa)

5.03

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoporin2 PF04096 52 - 192 1.7e-37 Nup98-96 autopeptidase S59
Nup96 PF12110 579 - 858 2.1e-75 Nuclear protein 96
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 471
AatII GACGTC 2 cut(s) 8, 2663
Acc16I TGCGCA 2 cut(s) 914, 2626
Acc36I ACCTGC 2 cut(s) 1118, 2140
AccB1I GGYRCC 1 cut(s) 2286
AccB7I CCANNNNNTGG 1 cut(s) 1498
AccII CGCG 1 cut(s) 64
AciI CCGC 4 cut(s) 923, 1081, 1637, 1855
AclI AACGTT 1 cut(s) 1549
AclWI GGATC 7 cut(s) 86, 318, 515, 623, 731, 1849, 2255
AcsI RAATTY 6 cut(s) 148, 1000, 1655, 2213, 2298, 2872
AcuI CTGAAG 3 cut(s) 1355, 2044, 2310
AcyI GRCGYC 2 cut(s) 5, 2660
AfaI GTAC 3 cut(s) 987, 1543, 1695
AfiI CCNNNNNNNGG 6 cut(s) 377, 530, 623, 904, 1498, 2138
AflII CTTAAG 1 cut(s) 1303
AflIII ACRYGT 2 cut(s) 2446, 2778
AgeI ACCGGT 1 cut(s) 904
AhdI GACNNNNNGTC 1 cut(s) 3091
AjiI CACGTC 2 cut(s) 1585, 2449
AjnI CCWGG 5 cut(s) 306, 616, 946, 967, 1830
AjuI GAANNNNNNNTTGG 2 cut(s) 1332, 1364
Alw21I GWGCWC 4 cut(s) 365, 488, 1740, 2644
Alw26I GTCTC 6 cut(s) 12, 1313, 1528, 3005, 3026, 3113
AlwI GGATC 7 cut(s) 86, 318, 515, 623, 731, 1849, 2255
AlwNI CAGNNNCTG 1 cut(s) 1568
AoxI GGCC 4 cut(s) 1135, 2102, 2380, 3124
ApaI GGGCCC 1 cut(s) 1139
ApeKI GCWGC 7 cut(s) 98, 222, 398, 1097, 1562, 1870, 1873
ApoI RAATTY 6 cut(s) 148, 1000, 1655, 2213, 2298, 2872
ArsI GACNNNNNNTTYG 2 cut(s) 871, 903
AsiGI ACCGGT 1 cut(s) 904
Asp700I GAANNNNTTC 3 cut(s) 545, 1632, 2000
AspA2I CCTAGG 1 cut(s) 2005
AspLEI GCGC 3 cut(s) 616, 915, 2627
AspS9I GGNCC 7 cut(s) 304, 1135, 1136, 2103, 2129, 2380, 3124
AsuC2I CCSGG 1 cut(s) 227
AsuHPI GGTGA 6 cut(s) 392, 418, 1375, 1679, 1871, 2924
AvaII GGWCC 2 cut(s) 304, 2129
AvrII CCTAGG 1 cut(s) 2005
BaeGI GKGCMC 1 cut(s) 1139
BaeI ACNNNNGTAYC 4 cut(s) 2518, 2551, 2814, 2847
BanI GGYRCC 1 cut(s) 2286
BanII GRGCYC 3 cut(s) 365, 1139, 2644
BauI CACGAG 1 cut(s) 335
BbsI GAAGAC 3 cut(s) 795, 1194, 1587
Bbv12I GWGCWC 4 cut(s) 365, 488, 1740, 2644
BbvCI CCTCAGC 2 cut(s) 402, 2958
BbvI GCAGC 7 cut(s) 85, 234, 385, 1109, 1574, 1882, 1885
BceAI ACGGC 1 cut(s) 2528
BcgI CGANNNNNNTGC 2 cut(s) 1931, 1965
BciT130I CCWGG 5 cut(s) 308, 618, 948, 969, 1832
BciVI GTATCC 2 cut(s) 986, 2546
BclI TGATCA 1 cut(s) 1209
BcnI CCSGG 1 cut(s) 227
BcoDI GTCTC 6 cut(s) 12, 1313, 1528, 3005, 3026, 3113
BfaI CTAG 6 cut(s) 48, 698, 1725, 2006, 2303, 2345
BfmI CTRYAG 2 cut(s) 2133, 2225
BfrI CTTAAG 1 cut(s) 1303
BfuAI ACCTGC 2 cut(s) 1118, 2140
BfuI GTATCC 2 cut(s) 986, 2546
BglI GCCNNNNNGGC 1 cut(s) 1143
BglII AGATCT 2 cut(s) 430, 2986
BisI GCNGC 7 cut(s) 99, 223, 399, 1098, 1563, 1871, 1874
BlnI CCTAGG 1 cut(s) 2005
BlsI GCNGC 7 cut(s) 100, 224, 400, 1099, 1564, 1872, 1875
BmcAI AGTACT 1 cut(s) 1543
Bme1390I CCNGG 6 cut(s) 227, 308, 618, 948, 969, 1832
Bme18I GGWCC 2 cut(s) 304, 2129
BmeRI GACNNNNNGTC 1 cut(s) 3091
BmgBI CACGTC 2 cut(s) 1585, 2449
BmgT120I GGNCC 7 cut(s) 304, 1135, 1136, 2103, 2129, 2380, 3124
BmiI GGNNCC 7 cut(s) 231, 1136, 1137, 1299, 1670, 2288, 2841
BmrFI CCNGG 6 cut(s) 227, 308, 618, 948, 969, 1832
BmrI ACTGGG 1 cut(s) 2764
BmsI GCATC 8 cut(s) 601, 1084, 1578, 1957, 2032, 2541, 2806, 3034
BmuI ACTGGG 1 cut(s) 2764
BoxI GACNNNNGTC 1 cut(s) 413
BpiI GAAGAC 3 cut(s) 795, 1194, 1587
BpmI CTGGAG 3 cut(s) 956, 1165, 2728
Bpu10I CCTNAGC 2 cut(s) 402, 2958
BpuEI CTTGAG 1 cut(s) 1754
BpuMI CCSGG 1 cut(s) 227
BsaHI GRCGYC 2 cut(s) 5, 2660
BsaJI CCNNGG 6 cut(s) 946, 967, 2005, 2099, 2293, 2584
BsaWI WCCGGW 1 cut(s) 904
BsaXI ACNNNNNCTCC 4 cut(s) 618, 648, 2580, 2610
Bsc4I CCNNNNNNNGG 6 cut(s) 377, 530, 623, 904, 1498, 2138
Bse118I RCCGGY 2 cut(s) 370, 904
Bse3DI GCAATG 4 cut(s) 134, 609, 1090, 1864
BseBI CCWGG 5 cut(s) 308, 618, 948, 969, 1832
BseDI CCNNGG 6 cut(s) 946, 967, 2005, 2099, 2293, 2584
BseGI GGATG 9 cut(s) 48, 295, 613, 649, 833, 1600, 2434, 2556, 2734
BseLI CCNNNNNNNGG 6 cut(s) 377, 530, 623, 904, 1498, 2138
BseMI GCAATG 4 cut(s) 134, 609, 1090, 1864
BseMII CTCAG 8 cut(s) 393, 1521, 2390, 2733, 2949, 2981, 3029, 3129
BseSI GKGCMC 1 cut(s) 1139
BseXI GCAGC 7 cut(s) 85, 234, 385, 1109, 1574, 1882, 1885
BseYI CCCAGC 3 cut(s) 718, 1454, 2768
Bsh1236I CGCG 1 cut(s) 64
Bsh1285I CGRYCG 3 cut(s) 909, 1390, 2884
BshFI GGCC 4 cut(s) 1137, 2104, 2382, 3126
BshNI GGYRCC 1 cut(s) 2286
BshTI ACCGGT 1 cut(s) 904
BsiEI CGRYCG 3 cut(s) 909, 1390, 2884
BsiHKAI GWGCWC 4 cut(s) 365, 488, 1740, 2644
BsiSI CCGG 3 cut(s) 226, 371, 905
BslFI GGGAC 2 cut(s) 399, 2093
BslI CCNNNNNNNGG 6 cut(s) 377, 530, 623, 904, 1498, 2138
BsmAI GTCTC 6 cut(s) 12, 1313, 1528, 3005, 3026, 3113
BsmBI CGTCTC 2 cut(s) 12, 3113
BsmFI GGGAC 2 cut(s) 399, 2093
BsmI GAATGC 4 cut(s) 112, 768, 2161, 2627
BsnI GGCC 4 cut(s) 1137, 2104, 2382, 3126
Bsp120I GGGCCC 1 cut(s) 1135
Bsp1286I GDGCHC 5 cut(s) 365, 488, 1139, 1740, 2644
Bsp1407I TGTACA 1 cut(s) 1693
Bsp19I CCATGG 1 cut(s) 2584
Bsp68I TCGCGA 1 cut(s) 64
BspACI CCGC 4 cut(s) 923, 1081, 1637, 1855
BspANI GGCC 4 cut(s) 1137, 2104, 2382, 3126
BspCNI CTCAG 8 cut(s) 394, 1522, 2389, 2734, 2950, 2982, 3028, 3128
BspFNI CGCG 1 cut(s) 64
BspLI GGNNCC 7 cut(s) 231, 1136, 1137, 1299, 1670, 2288, 2841
BspMAI CTGCAG 2 cut(s) 2137, 2229
BspMI ACCTGC 2 cut(s) 1118, 2140
BspPI GGATC 7 cut(s) 86, 318, 515, 623, 731, 1849, 2255
BspQI GCTCTTC 2 cut(s) 1638, 1642
BspT107I GGYRCC 1 cut(s) 2286
BspTI CTTAAG 1 cut(s) 1303
BsrDI GCAATG 4 cut(s) 134, 609, 1090, 1864
BsrFI RCCGGY 2 cut(s) 370, 904
BsrGI TGTACA 1 cut(s) 1693
BssAI RCCGGY 2 cut(s) 370, 904
BssECI CCNNGG 6 cut(s) 946, 967, 2005, 2099, 2293, 2584
BssNI GRCGYC 2 cut(s) 5, 2660
BssSI CACGAG 1 cut(s) 335
BssT1I CCWWGG 2 cut(s) 2005, 2584
Bst2BI CACGAG 1 cut(s) 335
Bst2UI CCWGG 5 cut(s) 308, 618, 948, 969, 1832
Bst4CI ACNGT 7 cut(s) 263, 1062, 1691, 1849, 2042, 2455, 2483
Bst6I CTCTTC 6 cut(s) 1638, 1642, 1991, 2199, 2254, 3104
BstACI GRCGYC 2 cut(s) 5, 2660
BstAFI CTTAAG 1 cut(s) 1303
BstAUI TGTACA 1 cut(s) 1693
BstC8I GCNNGC 2 cut(s) 927, 1950
BstDSI CCRYGG 2 cut(s) 2099, 2584
BstF5I GGATG 9 cut(s) 48, 295, 613, 649, 833, 1600, 2434, 2556, 2734
BstFNI CGCG 1 cut(s) 64
BstHHI GCGC 3 cut(s) 616, 915, 2627
BstMAI GTCTC 6 cut(s) 12, 1313, 1528, 3005, 3026, 3113
BstMCI CGRYCG 3 cut(s) 909, 1390, 2884
BstMWI GCNNNNNNNGC 7 cut(s) 193, 931, 1143, 1295, 2315, 2939, 3044
BstNI CCWGG 5 cut(s) 308, 618, 948, 969, 1832
BstNSI RCATGY 2 cut(s) 2782, 3027
BstPAI GACNNNNGTC 1 cut(s) 413
BstSCI CCNGG 6 cut(s) 225, 306, 616, 946, 967, 1830
BstSFI CTRYAG 2 cut(s) 2133, 2225
BstSLI GKGCMC 1 cut(s) 1139
BstUI CGCG 1 cut(s) 64
BstV1I GCAGC 7 cut(s) 85, 234, 385, 1109, 1574, 1882, 1885
BstV2I GAAGAC 3 cut(s) 795, 1194, 1587
BstX2I RGATCY 4 cut(s) 78, 430, 628, 2986
BstXI CCANNNNNNTGG 1 cut(s) 1838
BstYI RGATCY 4 cut(s) 78, 430, 628, 2986
BsuI GTATCC 2 cut(s) 986, 2546
BsuRI GGCC 4 cut(s) 1137, 2104, 2382, 3126
BtgI CCRYGG 2 cut(s) 2099, 2584
BtrI CACGTC 2 cut(s) 1585, 2449
BtsCI GGATG 9 cut(s) 48, 295, 613, 649, 833, 1600, 2434, 2556, 2734
BtsI GCAGTG 2 cut(s) 1014, 2804
BtsIMutI CAGTG 5 cut(s) 1014, 1158, 2245, 2451, 2804
BtuMI TCGCGA 1 cut(s) 64
BveI ACCTGC 2 cut(s) 1118, 2140
Cac8I GCNNGC 2 cut(s) 927, 1950
CaiI CAGNNNCTG 1 cut(s) 1568
CfoI GCGC 3 cut(s) 616, 915, 2627
Cfr10I RCCGGY 2 cut(s) 370, 904
Cfr13I GGNCC 7 cut(s) 304, 1135, 1136, 2103, 2129, 2380, 3124
CseI GACGC 1 cut(s) 3095
Csp6I GTAC 3 cut(s) 986, 1542, 1694
CspAI ACCGGT 1 cut(s) 904
CviAII CATG 9 cut(s) 174, 1052, 1108, 1328, 1498, 1964, 2585, 2779, 3024
CviQI GTAC 3 cut(s) 986, 1542, 1694
DraI TTTAAA 1 cut(s) 2889
DriI GACNNNNNGTC 1 cut(s) 3091
Eam1104I CTCTTC 6 cut(s) 1638, 1642, 1991, 2199, 2254, 3104
Eam1105I GACNNNNNGTC 1 cut(s) 3091
EarI CTCTTC 6 cut(s) 1638, 1642, 1991, 2199, 2254, 3104
Ecl136II GAGCTC 2 cut(s) 363, 2642
Eco130I CCWWGG 2 cut(s) 2005, 2584
Eco24I GRGCYC 3 cut(s) 365, 1139, 2644
Eco32I GATATC 2 cut(s) 1408, 1864
Eco47I GGWCC 2 cut(s) 304, 2129
Eco53kI GAGCTC 2 cut(s) 363, 2642
Eco57I CTGAAG 3 cut(s) 1355, 2044, 2310
EcoICRI GAGCTC 2 cut(s) 363, 2642
EcoO109I RGGNCCY 3 cut(s) 1135, 2129, 2380
EcoRI GAATTC 3 cut(s) 148, 1655, 2298
EcoRII CCWGG 5 cut(s) 306, 616, 946, 967, 1830
EcoRV GATATC 2 cut(s) 1408, 1864
EcoT14I CCWWGG 2 cut(s) 2005, 2584
EcoT38I GRGCYC 3 cut(s) 365, 1139, 2644
ErhI CCWWGG 2 cut(s) 2005, 2584
Esp3I CGTCTC 2 cut(s) 12, 3113
FaeI CATG 9 cut(s) 177, 1055, 1111, 1331, 1501, 1967, 2588, 2782, 3027
FalI AAGNNNNNCTT 2 cut(s) 67, 99
FaqI GGGAC 2 cut(s) 399, 2093
FatI CATG 9 cut(s) 173, 1051, 1107, 1327, 1497, 1963, 2584, 2778, 3023
FauI CCCGC 1 cut(s) 1088
FauNDI CATATG 1 cut(s) 2277
FbaI TGATCA 1 cut(s) 1209
Fnu4HI GCNGC 7 cut(s) 99, 223, 399, 1098, 1563, 1871, 1874
FokI GGATG 9 cut(s) 55, 302, 620, 656, 820, 1607, 2421, 2563, 2741
FriOI GRGCYC 3 cut(s) 365, 1139, 2644
Fsp4HI GCNGC 7 cut(s) 99, 223, 399, 1098, 1563, 1871, 1874
FspBI CTAG 6 cut(s) 48, 698, 1725, 2006, 2303, 2345
FspI TGCGCA 2 cut(s) 914, 2626
GlaI GCGC 3 cut(s) 615, 914, 2626
GluI GCNGC 7 cut(s) 99, 223, 399, 1098, 1563, 1871, 1874
GsaI CCCAGC 3 cut(s) 722, 1458, 2772
GsuI CTGGAG 3 cut(s) 956, 1165, 2728
HaeIII GGCC 4 cut(s) 1137, 2104, 2382, 3126
HapII CCGG 3 cut(s) 226, 371, 905
HgaI GACGC 1 cut(s) 3095
HhaI GCGC 3 cut(s) 616, 915, 2627
Hin1I GRCGYC 2 cut(s) 5, 2660
Hin1II CATG 9 cut(s) 177, 1055, 1111, 1331, 1501, 1967, 2588, 2782, 3027
Hin6I GCGC 3 cut(s) 614, 913, 2625
HinP1I GCGC 3 cut(s) 614, 913, 2625
HincII GTYRAC 2 cut(s) 457, 1065
HindII GTYRAC 2 cut(s) 457, 1065
HindIII AAGCTT 1 cut(s) 1934
HpaI GTTAAC 2 cut(s) 457, 1065
HpaII CCGG 3 cut(s) 226, 371, 905
HphI GGTGA 6 cut(s) 392, 418, 1375, 1679, 1871, 2924
Hpy166II GTNNAC 7 cut(s) 421, 457, 1065, 1464, 1694, 1852, 2804
Hpy8I GTNNAC 7 cut(s) 421, 457, 1065, 1464, 1694, 1852, 2804
HpyCH4III ACNGT 7 cut(s) 263, 1062, 1691, 1849, 2042, 2455, 2483
HpyCH4IV ACGT 6 cut(s) 5, 1549, 1584, 2403, 2448, 2660
HpyF10VI GCNNNNNNNGC 7 cut(s) 193, 931, 1143, 1295, 2315, 2939, 3044
HpySE526I ACGT 6 cut(s) 5, 1549, 1584, 2403, 2448, 2660
Hsp92I GRCGYC 2 cut(s) 5, 2660
Hsp92II CATG 9 cut(s) 177, 1055, 1111, 1331, 1501, 1967, 2588, 2782, 3027
HspAI GCGC 3 cut(s) 614, 913, 2625
Ksp22I TGATCA 1 cut(s) 1209
KspAI GTTAAC 2 cut(s) 457, 1065
LguI GCTCTTC 2 cut(s) 1638, 1642
Lsp1109I GCAGC 7 cut(s) 85, 234, 385, 1109, 1574, 1882, 1885
LweI GCATC 8 cut(s) 601, 1084, 1578, 1957, 2032, 2541, 2806, 3034
MaeI CTAG 6 cut(s) 48, 698, 1725, 2006, 2303, 2345
MaeII ACGT 6 cut(s) 5, 1549, 1584, 2403, 2448, 2660
MaeIII GTNAC 9 cut(s) 257, 406, 1054, 1381, 1685, 1971, 2449, 2912, 3093
MfeI CAATTG 2 cut(s) 1230, 1986
MflI RGATCY 4 cut(s) 78, 430, 628, 2986
MhlI GDGCHC 5 cut(s) 365, 488, 1139, 1740, 2644
MlyI GAGTC 5 cut(s) 53, 403, 2870, 2946, 3007
MmeI TCCRAC 2 cut(s) 282, 2293
MroXI GAANNNNTTC 3 cut(s) 545, 1632, 2000
MslI CAYNNNNRTG 1 cut(s) 2654
MspA1I CMGCKG 2 cut(s) 1444, 1778
MspCI CTTAAG 1 cut(s) 1303
MspI CCGG 3 cut(s) 226, 371, 905
MspR9I CCNGG 6 cut(s) 227, 308, 618, 948, 969, 1832
MssI GTTTAAAC 1 cut(s) 2889
MunI CAATTG 2 cut(s) 1230, 1986
Mva1269I GAATGC 4 cut(s) 112, 768, 2161, 2627
MvaI CCWGG 5 cut(s) 308, 618, 948, 969, 1832
MvnI CGCG 1 cut(s) 64
MwoI GCNNNNNNNGC 7 cut(s) 193, 931, 1143, 1295, 2315, 2939, 3044
NciI CCSGG 1 cut(s) 227
NcoI CCATGG 1 cut(s) 2584
NdeI CATATG 1 cut(s) 2277
NlaIII CATG 9 cut(s) 177, 1055, 1111, 1331, 1501, 1967, 2588, 2782, 3027
NlaIV GGNNCC 7 cut(s) 231, 1136, 1137, 1299, 1670, 2288, 2841
NmeAIII GCCGAG 1 cut(s) 3032
NmuCI GTSAC 7 cut(s) 406, 1054, 1381, 1685, 2449, 2912, 3093
NruI TCGCGA 1 cut(s) 64
NsbI TGCGCA 2 cut(s) 914, 2626
NspI RCATGY 2 cut(s) 2782, 3027
PciI ACATGT 1 cut(s) 2778
PciSI GCTCTTC 2 cut(s) 1638, 1642
PcsI WCGNNNNNNNCGW 1 cut(s) 1581
PctI GAATGC 4 cut(s) 112, 768, 2161, 2627
PdmI GAANNNNTTC 3 cut(s) 545, 1632, 2000
PfeI GAWTC 9 cut(s) 131, 1283, 1324, 1607, 1772, 2001, 2504, 2894, 2998
PflMI CCANNNNNTGG 1 cut(s) 1498
PinAI ACCGGT 1 cut(s) 904
PkrI GCNGC 7 cut(s) 100, 224, 400, 1099, 1564, 1872, 1875
Ple19I CGATCG 1 cut(s) 1390
PleI GAGTC 5 cut(s) 53, 403, 2869, 2945, 3007
PmeI GTTTAAAC 1 cut(s) 2889
PpsI GAGTC 5 cut(s) 53, 403, 2869, 2945, 3007
PpuMI RGGWCCY 1 cut(s) 2129
PscI ACATGT 1 cut(s) 2778
PshAI GACNNNNGTC 1 cut(s) 413
PsiI TTATAA 1 cut(s) 471
Psp124BI GAGCTC 2 cut(s) 365, 2644
Psp1406I AACGTT 1 cut(s) 1549
Psp5II RGGWCCY 1 cut(s) 2129
Psp6I CCWGG 5 cut(s) 306, 616, 946, 967, 1830
PspFI CCCAGC 3 cut(s) 718, 1454, 2768
PspGI CCWGG 5 cut(s) 306, 616, 946, 967, 1830
PspN4I GGNNCC 7 cut(s) 231, 1136, 1137, 1299, 1670, 2288, 2841
PspOMI GGGCCC 1 cut(s) 1135
PspPI GGNCC 7 cut(s) 304, 1135, 1136, 2103, 2129, 2380, 3124
PspPPI RGGWCCY 1 cut(s) 2129
PsrI GAACNNNNNNTAC 2 cut(s) 1168, 1200
PstI CTGCAG 2 cut(s) 2137, 2229
PstNI CAGNNNCTG 1 cut(s) 1568
PsuI RGATCY 4 cut(s) 78, 430, 628, 2986
PvuI CGATCG 1 cut(s) 1390
PvuII CAGCTG 2 cut(s) 1444, 1778
RruI TCGCGA 1 cut(s) 64
RsaI GTAC 3 cut(s) 987, 1543, 1695
RsaNI GTAC 3 cut(s) 986, 1542, 1694
RseI CAYNNNNRTG 1 cut(s) 2654
SacI GAGCTC 2 cut(s) 365, 2644
SapI GCTCTTC 2 cut(s) 1638, 1642
SatI GCNGC 7 cut(s) 99, 223, 399, 1098, 1563, 1871, 1874
Sau96I GGNCC 7 cut(s) 304, 1135, 1136, 2103, 2129, 2380, 3124
ScaI AGTACT 1 cut(s) 1543
SchI GAGTC 5 cut(s) 53, 403, 2870, 2946, 3007
ScrFI CCNGG 6 cut(s) 227, 308, 618, 948, 969, 1832
SduI GDGCHC 5 cut(s) 365, 488, 1139, 1740, 2644
SfaNI GCATC 8 cut(s) 601, 1084, 1578, 1957, 2032, 2541, 2806, 3034
SfcI CTRYAG 2 cut(s) 2133, 2225
SinI GGWCC 2 cut(s) 304, 2129
SmiMI CAYNNNNRTG 1 cut(s) 2654
SmlI CTYRAG 2 cut(s) 1303, 1733
SmoI CTYRAG 2 cut(s) 1303, 1733
SsiI CCGC 4 cut(s) 923, 1081, 1637, 1855
SspMI CTAG 6 cut(s) 48, 698, 1725, 2006, 2303, 2345
SstI GAGCTC 2 cut(s) 365, 2644
StyD4I CCNGG 6 cut(s) 225, 306, 616, 946, 967, 1830
StyI CCWWGG 2 cut(s) 2005, 2584
TaaI ACNGT 7 cut(s) 263, 1062, 1691, 1849, 2042, 2455, 2483
TaiI ACGT 6 cut(s) 8, 1552, 1587, 2406, 2451, 2663
TaqI TCGA 3 cut(s) 1019, 1035, 1434
TaqII GACCGA 1 cut(s) 2870
TatI WGTACW 2 cut(s) 1541, 1693
TfiI GAWTC 9 cut(s) 131, 1283, 1324, 1607, 1772, 2001, 2504, 2894, 2998
TscAI CASTG 5 cut(s) 1014, 1165, 2245, 2458, 2811
TseFI GTSAC 7 cut(s) 406, 1054, 1381, 1685, 2449, 2912, 3093
TseI GCWGC 7 cut(s) 98, 222, 398, 1097, 1562, 1870, 1873
Tsp45I GTSAC 7 cut(s) 406, 1054, 1381, 1685, 2449, 2912, 3093
TspGWI ACGGA 4 cut(s) 302, 503, 2088, 2414
TspRI CASTG 5 cut(s) 1014, 1165, 2245, 2458, 2811
Van91I CCANNNNNTGG 1 cut(s) 1498
Vha464I CTTAAG 1 cut(s) 1303
VpaK11BI GGWCC 2 cut(s) 304, 2129
XapI RAATTY 6 cut(s) 148, 1000, 1655, 2213, 2298, 2872
XbaI TCTAGA 2 cut(s) 2302, 2344
XceI RCATGY 2 cut(s) 2782, 3027
XcmI CCANNNNNNNNNTGG 2 cut(s) 435, 1189
XmaJI CCTAGG 1 cut(s) 2005
XmnI GAANNNNTTC 3 cut(s) 545, 1632, 2000
XspI CTAG 6 cut(s) 48, 698, 1725, 2006, 2303, 2345
ZraI GACGTC 2 cut(s) 6, 2661
ZrmI AGTACT 1 cut(s) 1543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.