Rh1AG150100

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0004174
Physical Location & Seq
Forward (+)
28240863 .. 28245928
5066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG150100.1

Sequence Viewer

Length: 2715 bp
ATGCTACAAACAAGGGTATCGTGTGTTGACCAGAGACAGAAAGAGAATATCGTGAAAATATTGAGACAAAGTGTGGAGGGACAAGGAGCTCATTTTGTTTCGTTTAATCCAGAAAATGGGGAATGGAAATTCTTTGTTAACCATTTTAGCAGATTTGGGTTGACTGAAGAAGATGAAGAAGATATGATGATGGAAGATACTGCTGTAGCTGAAGATCCTCCGGAATTGAACCATGATGAGATCTCTGATGCTGATGAAGAAAACCAAATGGATCCTACTGGAATTGTGCTCTCGCATTCTCTTCCTGCTCATCTTGGGCTTGACCCCATCAAGATGCAAGAAATGAGAATGTTGATGTTTTCTGATTTGGATGAGGAAGCCGAGGATATGAAAGAATTACCTGCACATTATAATCCATCATTTGGTAAAGAATACTCAAGATCTCCTTTAGAAAATGCTCAAAGGATGAGTTATCGATCTACTCCACCAGCCGTGCGAAAGACCCCTCTAGCATTGCTTGAGTACAAGCATGGTAGTTTTGACTCAAACTCTCCTGGAGCCATTCTAATGGCCCACGAAAATAAAGCCTTGCCATTGAAGACACTAAAAGAAGGTTTTAAGCTTGATCTCAGTAGTGAAACACCAGTAACTAGAAAAGATCCTCGCAACATAGTTGATGCAGGTTTGTTAATGGGTAGGTCTTTTCGAGTAGGATGGGGCCCAAATGGAATTCTTGTCCATGCTGGCACACCAATAGGCAGTAATGGTTCCCAAAGGGTGCTGTCATCTGTAATTAATATAGAGAAGGTTGCTATTGACAATGTTGTCAGAGATAAAAATAACAAGGTTAGAGCAGAACTTGTTGAAACGGCTATCACTTCTCCATTGGAGCTTCACAAGGGACTGTTTCATGAAACAAAAGAAGTTGAAGTTGGATCCTTCAGTCTGAGACTTCAGAAACTTGTCTCGAATCGGTTTATGCTATCAGATATTTGCAGGAGTTATGTAGATATTATTGAGAGGCAGCTGGAGGTTCCTGGTTTATCTTCCTCTGCATGTTTGGTTTTGCCACATCAAATTATGATTTGGGAATTGATAAAAGTTCTTTTCTCTGAAAGGGAAAATGGCGAGAAAATGGAATCTTTTGGTGCTGATGATGAGGTAGAAATGGTGCAGGATGAGAAGCTCCCTTCACAGGAAACTGACCCGGAAGCATTACCTCTAATTAGGAGGGCCGAGTTCAGTTACTGGTTGCAAGAAAATGTGCACCATCGAGTAGAAGAAATCATCTCCTTGAATGAGTCCAATTATCTGCAATCCATATTATTACTTCTGAGTGGGCGGCAGCTGGATGAAGCTGTGGAACTGGCTGCTTCTCAGGGAGACGTGAGATTGGCTTGTTTGTTAAGTCAGTCTGGTGGGTCCATAGTTAATCGTTCTGACATGGCACAGCAGCTTGAGCTTTGGAGGATCAATGGACTGGATTTCAGTTTCATTGAGAAAGATAGGATAAGGCTTTATGAGTTGCTTGCGGGTAATGTCCACGGTGCTTTTCATGATATTGAAGTTGATTGGAAGAGGTTTCTTGGGTTATTGATGTGGTATCACTTACCACCTAATATTCCATTACCCATTGTTTTCCGCACATATCATGATCTTCTTAATGAGAATAAGGCTCCATATCCTGTTCCTGTTTACATGGATGGACGTGTAGAAGAGACTGTGGATCGGAGTGCAGAGAAACGTTATGACATATCATATTACCTTATGATGCTACATGGAAGTGAAGATAGTGAAGTTGATTTCCTGAAGACCATGTTCAGTGCTTTCTCGTCAACATATGATCCACTTGATTACCATATGATCTGGCATCAGCGTGCTGTGTTGGAAGCAGTTGGGGTCATCAGTGCCAATGACCTTCATGTTCTTGACATGGGATTTGTTTCCCAGTTGTTGTGTCTTGGGCAATGTCATTGGGCCATCTATGTGGTCCTTCACATGGCCCATTGTGAAGACTTTCCATATCTTCATGCTAATCTTATTCGGGAAATTTTGTTCCAATATTGTGATTCTTGGAGCTCACAAATATCACAACGGCAATTCATTGAGGACTTGGGTATTCCTAAAGCATGGCTTCATGAGGCTATGGCAGTTTATTTCAATTATTATGGGGATCTTTCAAAGGCACTTGAACACTTCATTGAATGTGCAAACTGGCAGAAAGCGCATTCTATTTTCGTAATTTCTGTTGCTCACACATTATTCTTGTCAGCCAAACACTCAGAGATATGGAGGTTAGCAACTTCCATGGAGGACCACAAATCAGAAATTGAAAATTGGGACTTGGGAGCTGGCATCTACATTTCATTCTATCTAGCAAGAAGTTCATTGCAGGGAGCTGACGATGCCATGAGTGAACTGGGTTCTGTTGAAAGCAAAAATGCTGCTTCCAGAGAGTTTCTTGGTCAGTTAAACTTGTCTTTGGCTGTTTGGGGTGCCAAGCTACCAATGGATGTGAGAGTCGTCTATTCGAAGATGGCGGATGAAATATGCAACTTGCTTTTGTCTGATATTAGCGAGGGCCCAACACGAGATGTTCAGTTAAGTTGCTTTGACACCGTTTTCAGTGCGCCCATACCTCAGGACCTTCGCTCAAATCATTTGCAAGATGTAGTGTCTCTCTTCACATGCTTTCTATCCGAAGTTGCTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0007154 GO:0007165 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009733 GO:0009870 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015267 GO:0015288 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0022803 GO:0022829 GO:0022857 GO:0023052 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045088 GO:0045089 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0055085 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2 Nup96

Protein Analysis

904

Amino Acids

102.71

Weight (kDa)

4.94

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoporin2 PF04096 10 - 54 2.9e-08 Nup98-96 autopeptidase S59
Nup96 PF12110 440 - 719 2e-76 Nuclear protein 96
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
AasI GACNNNNNNGTC 1 cut(s) 824
Acc36I ACCTGC 2 cut(s) 409, 671
AccB1I GGYRCC 1 cut(s) 2495
AccB7I CCANNNNNTGG 2 cut(s) 116, 422
AccIII TCCGGA 1 cut(s) 220
AciI CCGC 4 cut(s) 1342, 1532, 1642, 2540
AclI AACGTT 1 cut(s) 1744
AcsI RAATTY 3 cut(s) 128, 729, 2049
AcuI CTGAAG 5 cut(s) 186, 231, 925, 938, 1829
AfaI GTAC 1 cut(s) 524
AfiI CCNNNNNNNGG 4 cut(s) 116, 422, 1195, 1999
AflIII ACRYGT 1 cut(s) 1708
AjiI CACGTC 2 cut(s) 1387, 1709
AjnI CCWGG 2 cut(s) 553, 1036
AjuI GAANNNNNNNTTGG 2 cut(s) 915, 947
AloI GAACNNNNNNTCC 2 cut(s) 2039, 2071
Alw21I GWGCWC 4 cut(s) 91, 291, 1269, 2081
Alw26I GTCTC 7 cut(s) 28, 58, 943, 970, 1377, 1712, 2682
Alw44I GTGCAC 1 cut(s) 1265
AlwNI CAGNNNCTG 1 cut(s) 1248
Aor13HI TCCGGA 1 cut(s) 220
AoxI GGCC 6 cut(s) 570, 718, 1233, 1977, 2001, 2581
ApaI GGGCCC 2 cut(s) 722, 2585
ApaLI GTGCAC 1 cut(s) 1265
ApeKI GCWGC 5 cut(s) 1024, 1345, 1370, 1453, 2444
ApoI RAATTY 3 cut(s) 128, 729, 2049
ArsI GACNNNNNNTTYG 2 cut(s) 1922, 1954
AseI ATTAAT 1 cut(s) 795
Asp700I GAANNNNTTC 1 cut(s) 2016
AspLEI GCGC 2 cut(s) 2227, 2632
AsuC2I CCSGG 1 cut(s) 1208
AsuII TTCGAA 1 cut(s) 2531
AvaII GGWCC 4 cut(s) 1422, 1990, 2314, 2644
AxyI CCTNAGG 1 cut(s) 2640
BaeGI GKGCMC 3 cut(s) 722, 1269, 2585
BaeI ACNNNNGTAYC 3 cut(s) 33, 189, 222
BamHI GGATCC 2 cut(s) 271, 935
BanI GGYRCC 1 cut(s) 2495
BanII GRGCYC 4 cut(s) 91, 722, 2081, 2585
BauI CACGAG 1 cut(s) 2589
BbsI GAAGAC 3 cut(s) 605, 1817, 2019
Bbv12I GWGCWC 4 cut(s) 91, 291, 1269, 2081
BbvI GCAGC 5 cut(s) 1036, 1357, 1357, 1465, 2431
BccI CCATC 8 cut(s) 184, 335, 424, 708, 1278, 1697, 1988, 2530
BceAI ACGGC 3 cut(s) 476, 885, 2111
BciT130I CCWGG 2 cut(s) 555, 1038
BcnI CCSGG 1 cut(s) 1208
BcoDI GTCTC 7 cut(s) 28, 58, 943, 970, 1377, 1712, 2682
BfaI CTAG 3 cut(s) 509, 651, 2375
BfmI CTRYAG 1 cut(s) 204
BfuAI ACCTGC 2 cut(s) 409, 671
BglII AGATCT 2 cut(s) 240, 440
BisI GCNGC 6 cut(s) 1025, 1343, 1346, 1371, 1454, 2445
BlsI GCNGC 6 cut(s) 1026, 1344, 1347, 1372, 1455, 2446
Bme1390I CCNGG 3 cut(s) 555, 1038, 1208
Bme18I GGWCC 4 cut(s) 1422, 1990, 2314, 2644
BmgBI CACGTC 2 cut(s) 1387, 1709
BmrFI CCNGG 3 cut(s) 555, 1038, 1208
BmrI ACTGGG 2 cut(s) 1942, 2429
BmsI GCATC 7 cut(s) 238, 324, 667, 1761, 1879, 2364, 2395
BmuI ACTGGG 2 cut(s) 1942, 2429
BpiI GAAGAC 3 cut(s) 605, 1817, 2019
BpmI CTGGAG 2 cut(s) 576, 1049
Bpu14I TTCGAA 1 cut(s) 2531
BpuEI CTTGAG 3 cut(s) 421, 539, 1478
BpuMI CCSGG 1 cut(s) 1208
Bsa29I ATCGAT 1 cut(s) 475
BsaJI CCNNGG 3 cut(s) 381, 1543, 2307
BsaWI WCCGGW 1 cut(s) 220
Bsc4I CCNNNNNNNGG 4 cut(s) 116, 422, 1195, 1999
Bse1I ACTGG 8 cut(s) 283, 644, 1253, 1371, 1485, 1948, 2219, 2424
Bse21I CCTNAGG 1 cut(s) 2640
Bse3DI GCAATG 3 cut(s) 512, 1973, 2387
BseAI TCCGGA 1 cut(s) 220
BseBI CCWGG 2 cut(s) 555, 1038
BseCI ATCGAT 1 cut(s) 475
BseDI CCNNGG 3 cut(s) 381, 1543, 2307
BseGI GGATG 8 cut(s) 376, 471, 719, 1183, 1357, 1708, 2518, 2548
BseLI CCNNNNNNNGG 4 cut(s) 116, 422, 1195, 1999
BseMI GCAATG 3 cut(s) 512, 1973, 2387
BseMII CTCAG 6 cut(s) 643, 938, 1325, 1391, 2295, 2654
BseNI ACTGG 8 cut(s) 283, 644, 1253, 1371, 1485, 1948, 2219, 2424
BseSI GKGCMC 3 cut(s) 722, 1269, 2585
BseXI GCAGC 5 cut(s) 1036, 1357, 1357, 1465, 2431
BsgI GTGCAG 3 cut(s) 387, 1193, 1755
BshFI GGCC 6 cut(s) 572, 720, 1235, 1979, 2003, 2583
BshNI GGYRCC 1 cut(s) 2495
BshVI ATCGAT 1 cut(s) 475
BsiHKAI GWGCWC 4 cut(s) 91, 291, 1269, 2081
BsiSI CCGG 2 cut(s) 221, 1208
BslFI GGGAC 3 cut(s) 93, 915, 2354
BslI CCNNNNNNNGG 4 cut(s) 116, 422, 1195, 1999
BsmAI GTCTC 7 cut(s) 28, 58, 943, 970, 1377, 1712, 2682
BsmBI CGTCTC 1 cut(s) 1377
BsmFI GGGAC 3 cut(s) 93, 915, 2354
BsmI GAATGC 2 cut(s) 295, 2227
BsnI GGCC 6 cut(s) 572, 720, 1235, 1979, 2003, 2583
Bsp119I TTCGAA 1 cut(s) 2531
Bsp120I GGGCCC 2 cut(s) 718, 2581
Bsp1286I GDGCHC 6 cut(s) 91, 291, 722, 1269, 2081, 2585
Bsp13I TCCGGA 1 cut(s) 220
Bsp19I CCATGG 1 cut(s) 2307
BspACI CCGC 4 cut(s) 1342, 1532, 1642, 2540
BspANI GGCC 6 cut(s) 572, 720, 1235, 1979, 2003, 2583
BspCNI CTCAG 6 cut(s) 642, 939, 1326, 1390, 2294, 2653
BspDI ATCGAT 1 cut(s) 475
BspEI TCCGGA 1 cut(s) 220
BspHI TCATGA 4 cut(s) 910, 1555, 1651, 2137
BspMI ACCTGC 2 cut(s) 409, 671
BspT104I TTCGAA 1 cut(s) 2531
BspT107I GGYRCC 1 cut(s) 2495
BsrDI GCAATG 3 cut(s) 512, 1973, 2387
BsrI ACTGG 8 cut(s) 283, 644, 1253, 1371, 1485, 1948, 2219, 2424
BssECI CCNNGG 3 cut(s) 381, 1543, 2307
BssSI CACGAG 1 cut(s) 2589
BssT1I CCWWGG 1 cut(s) 2307
Bst2BI CACGAG 1 cut(s) 2589
Bst2UI CCWGG 2 cut(s) 555, 1038
Bst4CI ACNGT 4 cut(s) 906, 1547, 1723, 2620
Bst6I CTCTTC 4 cut(s) 306, 1571, 1710, 2687
BstBI TTCGAA 1 cut(s) 2531
BstC8I GCNNGC 4 cut(s) 745, 1530, 1878, 2353
BstDEI CTNAG 6 cut(s) 629, 947, 1334, 1377, 2281, 2640
BstDSI CCRYGG 2 cut(s) 1543, 2307
BstF5I GGATG 8 cut(s) 376, 471, 719, 1183, 1357, 1708, 2518, 2548
BstHHI GCGC 2 cut(s) 2227, 2632
BstMAI GTCTC 7 cut(s) 28, 58, 943, 970, 1377, 1712, 2682
BstMWI GCNNNNNNNGC 3 cut(s) 1459, 2224, 2405
BstNI CCWGG 2 cut(s) 555, 1038
BstNSI RCATGY 2 cut(s) 1059, 2691
BstSCI CCNGG 3 cut(s) 553, 1036, 1206
BstSFI CTRYAG 1 cut(s) 204
BstSLI GKGCMC 3 cut(s) 722, 1269, 2585
BstV1I GCAGC 5 cut(s) 1036, 1357, 1357, 1465, 2431
BstV2I GAAGAC 3 cut(s) 605, 1817, 2019
BstX2I RGATCY 7 cut(s) 214, 240, 271, 440, 658, 935, 2173
BstXI CCANNNNNNTGG 2 cut(s) 568, 1987
BstYI RGATCY 7 cut(s) 214, 240, 271, 440, 658, 935, 2173
Bsu15I ATCGAT 1 cut(s) 475
Bsu36I CCTNAGG 1 cut(s) 2640
BsuRI GGCC 6 cut(s) 572, 720, 1235, 1979, 2003, 2583
BsuTUI ATCGAT 1 cut(s) 475
BtgI CCRYGG 2 cut(s) 1543, 2307
BtrI CACGTC 2 cut(s) 1387, 1709
BtsCI GGATG 8 cut(s) 376, 471, 719, 1183, 1357, 1708, 2518, 2548
BtsIMutI CAGTG 3 cut(s) 1828, 1912, 2632
BveI ACCTGC 2 cut(s) 409, 671
Cac8I GCNNGC 4 cut(s) 745, 1530, 1878, 2353
CaiI CAGNNNCTG 1 cut(s) 1248
CciI TCATGA 4 cut(s) 910, 1555, 1651, 2137
CfoI GCGC 2 cut(s) 2227, 2632
ClaI ATCGAT 1 cut(s) 475
Csp6I GTAC 1 cut(s) 523
CviQI GTAC 1 cut(s) 523
DdeI CTNAG 6 cut(s) 629, 947, 1334, 1377, 2281, 2640
DrdI GACNNNNNNGTC 1 cut(s) 824
DseDI GACNNNNNNGTC 1 cut(s) 824
Eam1104I CTCTTC 4 cut(s) 306, 1571, 1710, 2687
EarI CTCTTC 4 cut(s) 306, 1571, 1710, 2687
EciI GGCGGA 1 cut(s) 2555
Ecl136II GAGCTC 2 cut(s) 89, 2079
Eco130I CCWWGG 1 cut(s) 2307
Eco24I GRGCYC 4 cut(s) 91, 722, 2081, 2585
Eco47I GGWCC 4 cut(s) 1422, 1990, 2314, 2644
Eco53kI GAGCTC 2 cut(s) 89, 2079
Eco57I CTGAAG 5 cut(s) 186, 231, 925, 938, 1829
Eco81I CCTNAGG 1 cut(s) 2640
EcoICRI GAGCTC 2 cut(s) 89, 2079
EcoO109I RGGNCCY 3 cut(s) 718, 2581, 2644
EcoRI GAATTC 1 cut(s) 729
EcoRII CCWGG 2 cut(s) 553, 1036
EcoT14I CCWWGG 1 cut(s) 2307
EcoT38I GRGCYC 4 cut(s) 91, 722, 2081, 2585
ErhI CCWWGG 1 cut(s) 2307
Esp3I CGTCTC 1 cut(s) 1377
FalI AAGNNNNNCTT 4 cut(s) 430, 462, 2118, 2150
FaqI GGGAC 3 cut(s) 93, 915, 2354
FauI CCCGC 1 cut(s) 1525
FauNDI CATATG 2 cut(s) 1840, 1860
Fnu4HI GCNGC 6 cut(s) 1025, 1343, 1346, 1371, 1454, 2445
FokI GGATG 8 cut(s) 383, 478, 726, 1190, 1364, 1715, 2525, 2555
FriOI GRGCYC 4 cut(s) 91, 722, 2081, 2585
Fsp4HI GCNGC 6 cut(s) 1025, 1343, 1346, 1371, 1454, 2445
FspBI CTAG 3 cut(s) 509, 651, 2375
GlaI GCGC 2 cut(s) 2226, 2631
GluI GCNGC 6 cut(s) 1025, 1343, 1346, 1371, 1454, 2445
GsuI CTGGAG 2 cut(s) 576, 1049
HaeIII GGCC 6 cut(s) 572, 720, 1235, 1979, 2003, 2583
HapII CCGG 2 cut(s) 221, 1208
HhaI GCGC 2 cut(s) 2227, 2632
Hin6I GCGC 2 cut(s) 2225, 2630
HinP1I GCGC 2 cut(s) 2225, 2630
HincII GTYRAC 4 cut(s) 28, 139, 162, 1836
HindII GTYRAC 4 cut(s) 28, 139, 162, 1836
HindIII AAGCTT 1 cut(s) 620
HinfI GANTC 6 cut(s) 542, 970, 1139, 1301, 2069, 2520
HpaI GTTAAC 1 cut(s) 139
HpaII CCGG 2 cut(s) 221, 1208
Hpy166II GTNNAC 8 cut(s) 28, 139, 162, 1267, 1543, 1696, 1836, 2417
Hpy8I GTNNAC 8 cut(s) 28, 139, 162, 1267, 1543, 1696, 1836, 2417
HpyAV CCTTC 7 cut(s) 605, 799, 949, 1200, 1928, 2003, 2657
HpyCH4III ACNGT 4 cut(s) 906, 1547, 1723, 2620
HpyCH4IV ACGT 3 cut(s) 1386, 1708, 1744
HpyF10VI GCNNNNNNNGC 3 cut(s) 1459, 2224, 2405
HpyF3I CTNAG 6 cut(s) 629, 947, 1334, 1377, 2281, 2640
HpySE526I ACGT 3 cut(s) 1386, 1708, 1744
HspAI GCGC 2 cut(s) 2225, 2630
Kpn2I TCCGGA 1 cut(s) 220
KspAI GTTAAC 1 cut(s) 139
LmnI GCTCC 8 cut(s) 86, 557, 889, 1191, 1681, 2076, 2348, 2396
Lsp1109I GCAGC 5 cut(s) 1036, 1357, 1357, 1465, 2431
LweI GCATC 7 cut(s) 238, 324, 667, 1761, 1879, 2364, 2395
MaeI CTAG 3 cut(s) 509, 651, 2375
MaeII ACGT 3 cut(s) 1386, 1708, 1744
MaeIII GTNAC 2 cut(s) 646, 1244
MflI RGATCY 7 cut(s) 214, 240, 271, 440, 658, 935, 2173
MhlI GDGCHC 6 cut(s) 91, 291, 722, 1269, 2081, 2585
MlyI GAGTC 3 cut(s) 536, 1310, 2529
MmeI TCCRAC 2 cut(s) 913, 1866
MroI TCCGGA 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 2016
MslI CAYNNNNRTG 5 cut(s) 332, 566, 1782, 1875, 1985
MspA1I CMGCKG 2 cut(s) 1027, 1348
MspI CCGG 2 cut(s) 221, 1208
MspR9I CCNGG 3 cut(s) 555, 1038, 1208
Mva1269I GAATGC 2 cut(s) 295, 2227
MvaI CCWGG 2 cut(s) 555, 1038
MwoI GCNNNNNNNGC 3 cut(s) 1459, 2224, 2405
NciI CCSGG 1 cut(s) 1208
NcoI CCATGG 1 cut(s) 2307
NdeI CATATG 2 cut(s) 1840, 1860
NmeAIII GCCGAG 2 cut(s) 406, 1261
NspI RCATGY 2 cut(s) 1059, 2691
NspV TTCGAA 1 cut(s) 2531
PagI TCATGA 4 cut(s) 910, 1555, 1651, 2137
PctI GAATGC 2 cut(s) 295, 2227
PdmI GAANNNNTTC 1 cut(s) 2016
PfeI GAWTC 3 cut(s) 970, 1139, 2069
PflMI CCANNNNNTGG 2 cut(s) 116, 422
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 6 cut(s) 1026, 1344, 1347, 1372, 1455, 2446
PleI GAGTC 3 cut(s) 536, 1309, 2528
PpsI GAGTC 3 cut(s) 536, 1309, 2528
PpuMI RGGWCCY 1 cut(s) 2644
PshBI ATTAAT 1 cut(s) 795
PsiI TTATAA 1 cut(s) 411
Psp124BI GAGCTC 2 cut(s) 91, 2081
Psp1406I AACGTT 1 cut(s) 1744
Psp5II RGGWCCY 1 cut(s) 2644
Psp6I CCWGG 2 cut(s) 553, 1036
PspGI CCWGG 2 cut(s) 553, 1036
PspOMI GGGCCC 2 cut(s) 718, 2581
PspPPI RGGWCCY 1 cut(s) 2644
PstNI CAGNNNCTG 1 cut(s) 1248
PsuI RGATCY 7 cut(s) 214, 240, 271, 440, 658, 935, 2173
PvuII CAGCTG 2 cut(s) 1027, 1348
RsaI GTAC 1 cut(s) 524
RsaNI GTAC 1 cut(s) 523
RseI CAYNNNNRTG 5 cut(s) 332, 566, 1782, 1875, 1985
SacI GAGCTC 2 cut(s) 91, 2081
SatI GCNGC 6 cut(s) 1025, 1343, 1346, 1371, 1454, 2445
SchI GAGTC 3 cut(s) 536, 1310, 2529
ScrFI CCNGG 3 cut(s) 555, 1038, 1208
SduI GDGCHC 6 cut(s) 91, 291, 722, 1269, 2081, 2585
SfaNI GCATC 7 cut(s) 238, 324, 667, 1761, 1879, 2364, 2395
SfcI CTRYAG 1 cut(s) 204
SfuI TTCGAA 1 cut(s) 2531
SinI GGWCC 4 cut(s) 1422, 1990, 2314, 2644
SmiMI CAYNNNNRTG 5 cut(s) 332, 566, 1782, 1875, 1985
SmlI CTYRAG 3 cut(s) 436, 518, 1457
SmoI CTYRAG 3 cut(s) 436, 518, 1457
SsiI CCGC 4 cut(s) 1342, 1532, 1642, 2540
SspI AATATT 3 cut(s) 60, 1621, 2063
SspMI CTAG 3 cut(s) 509, 651, 2375
SstI GAGCTC 2 cut(s) 91, 2081
StyD4I CCNGG 3 cut(s) 553, 1036, 1206
StyI CCWWGG 1 cut(s) 2307
TaaI ACNGT 4 cut(s) 906, 1547, 1723, 2620
TaiI ACGT 3 cut(s) 1389, 1711, 1747
TaqI TCGA 5 cut(s) 475, 706, 968, 1273, 2531
TatI WGTACW 1 cut(s) 522
TauI GCSGC 1 cut(s) 1345
TfiI GAWTC 3 cut(s) 970, 1139, 2069
TscAI CASTG 3 cut(s) 1828, 1912, 2632
TseI GCWGC 5 cut(s) 1024, 1345, 1370, 1453, 2444
TspRI CASTG 3 cut(s) 1828, 1912, 2632
Van91I CCANNNNNTGG 2 cut(s) 116, 422
VneI GTGCAC 1 cut(s) 1265
VpaK11BI GGWCC 4 cut(s) 1422, 1990, 2314, 2644
VspI ATTAAT 1 cut(s) 795
XapI RAATTY 3 cut(s) 128, 729, 2049
XceI RCATGY 2 cut(s) 1059, 2691
XcmI CCANNNNNNNNNTGG 2 cut(s) 2416, 2506
XmnI GAANNNNTTC 1 cut(s) 2016
XspI CTAG 3 cut(s) 509, 651, 2375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.