Prupe.2G099100_v2.0.a1

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0004174
Physical Location & Seq
Reverse (-)
15479604 .. 15486563
6960 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G099100.3

Sequence Viewer

Length: 3129 bp
ATGGGCATTGATTCTGGAACTTGTAATGCACTAATTGTGTGCCAACACAAAAAAAGAAGGATATCTTCGAACACTGGCATTTCGTTGTGTGAGACATTTAGTCCTCTTGAAGGTTCCTTACCCTATTTACCAACTTTAGAAGAAGCTGATTACTACACGCAGCCCTCTTTGAAGGAATTGGCTGCTCGAGAATATACAGATCCTGGTTTTTCTAGTCGAGTTTTGGACTTTACAGTTGGAAGATTCGGTTATGGATCCATCAAATATCTTGGGAAGACTGACATTAGGAGATTGGAATTAGATAAAATTGTGAAGTTCCGCAGACATGAGGTTATTGTATATGAAGATGAAACTGCCAAACCTTTGGTTGGACAAGGCCTTAACAAGCCTGCTGAAGTAACTTTAGTGCTACAAACAAGACCATCAAATATGGATAAGAGACAGAAAGATAATAGTGTGAAAAAATTGAGGCAGATTGTGGAGGGACAAGGAGCTCAGTTTATTTCGTTTAATCCAGAAAACGGGGAATGGAAATTTTTTGTTCACCATTTCAGCAGATTTGGATTGAGTGAAGATGATGAAGAAGACATCATGATGGAAGATGCTGCTGCAGCTCAAGATCTTGTGGAAATGAACCATGGTGAGATTTCTGATGCTGATGAAGAAACCCAAATGGATCCCACTGGAATTGTGCTTTCGCATTCTCTTCCTGCTCATCTTGGGCTTGACCCTGTAAAGATGAAGGAAATGAGAATGTTGATGTTTCCTGATGGGGAAGAGGAAGCTGAGGAGTTGAATCAAGTACCTGCACATTATAATCCATCCTTTGGTAGAGAATACATAAGACCTCCTTTACAAAATACGTCTCAGAGGATGAGTGATAGATCTACTCCACCACCTGTTCGAAAAACCCCATTGGCATTGCTCGAGTATAAGCATGGTAGTTTTGACTCAAACTCTCCTGGGGCCATTCTAATGGCCCAAGAAAATAAGGTCATACCTACAAAGATACTAAAAGAAGGTTTTAAGCTTGATCTCAAGCATGAAACACCAGTGACTAAAAGACATTGTCGCAACATAGTTGATGCAGGTCTGTTGATGGGTAGGTCATTTCGAGTAGGATGGGGTCCAAATGGAACCCTAGTCCATGCTGGAACACCTGTAGGGAGTACTGGTTCTCAAATGATGTTATCATCCACAATCAATTTAGAGAAGGTTGCTATTGACAATGTTGTTAGGGATGAAAATAACAAAGTTAGAGAGGAACTTATTGACACGGCTATTGATTCTCCACTAGATTTTCACATGGGATTACTTCATCAGACAGAAGAGATTGAAGTTGGATCCTTCAACCTAAGGCTGCAGAAGGTTGTCTCTAATCGCTTGATGCTTTCAGAGATTTGCAGGAGCTATGTAGATATTATTGAGAAGCAGCTGGAAGTTCCTAGGCTATCTTCCTCTGCTCGTTTGGGTTTGACACACCAAATAATGATTTGGGAACTGATAAAAGTTCTTTTTTCTGATAGGGAAAATGGTGGGAAAATGAAATCTTTGGGTGCTGATAATGAGGAAGAAATGGTGCAGGATGTGAAGGAAGCTTCTCAAGAAGTCGACGTGGAAGCATTACCTCTTATTCGGAGGGCAGAGTTTAGTTATTGGTTGCAAGAGAATGTATGCCATCGAGTACAAGAAAGAATGAGCTCCTTGAATGAGTCCAGTTATCTGGAATACATATTATTACTTCTGAGTGGGCGCCAATTGGATGCTGCTGTGGAACTGGCTGCTTCTCGGGGAGATGTGAGATTGGCATGTTTGTTAAGTCAGGCTGGAGGGTCCATAGTCAATCGTTCTGACATGGCTCAACAGCTTGATCGTTGGAGGAGCAATGGGCTGGATTTCAGTTTCATTGAGAAAGACAGGATAAGGCTTTATGAGTTGCTTGCTGGTAATATCGACGATGCTTTTCATGATGTTAAAGTTGATTGGAAGAGGTTTCTAGGGTTATTGATGTGGTATCAATTAGCACCTAGCACCTCATTGCCCACTGTTTTTCGCACTTATCGACATCTTCTTGACGAGGGTAAGGCTCCATACCCTGTTCCGATTTACATTGATGAAGGACTGGTAGAAGAGTCTGAGAATTTTAATGCGGTAAAACGTTATGACCTATCATATTATCTTATGCTGCTTCATGCCAGTGAAGAAAGTGAAGTTGGCTTTCTAAAGAGCATGCTCAGTGCCTTTTCATCAACACATGATCCGCTTGATTACCATATGATCTGGCATCAGCGTGCAGTGTTGGAAGCAGTTGGGGCTATCAGCTCTAAAGATCTTCATGTTCTTGACATGGGATTTGTTTCCCAGCTGTTGTGTTTTGGGAAATGTCATTGGGCCATCTATGTGGTCCTTCACATGCCCCATTGTGAAGATTTTCCATATGTCCATGCTAATCTTATTCGGGAAATCTTGTTCCAATATTGTGAATCCTGGAGTTCTCAAGAATCACAACGCCAAGCCATTGAGAACTTGGGTATTCCTAAGGCATGGCTTCATGAGGCTATGGCTGTTTATTTCAATTACTATGGGGATCTTGCAAAGGCCCTTGAACACTTTCTTCAATGTGCAAATTGGCAGAAAGCACACACTATTTTCGTAACTTCTGTTGCCCACAAATTATTCTTGTCTGCCGAACACTCAGAGATATGGAGGCTTGCAACTTCCATGGAGGACTACAAATCAGAAATTGAAAATTGGGACCTGGGAGCTGGGATTTATATTTCATTCTATCTAATTAGAAGTTCATTGCAGGAAGCGGACAATACCATGAACGAACTGGATTCTCTTGAAAGCAAAAATTCTGCATGTAGAGAGTTTCTTGGTCAGTTAAAGCGATCTTTGGCTGTTTGGGGTGTCCTGCTACCCGTTGACGTGAGGGTAGTTTATTCAAAGATGGCAGATGAGATATGCAATTTGCTTTTATCTGATATTGGAGATTGCCCAACACGAGATGTTCAATTAAGTTGTTTTGACACCGTTTTTCGTGCTCCCATTCCTGAAGACCTTCGCGCAAGTCATTTGCAAGATGCAGTGTCTCTCTTTACATGCTTTCTTTCAGAGGTTGCTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0007154 GO:0007165 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009733 GO:0009870 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015267 GO:0015288 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0022803 GO:0022829 GO:0022857 GO:0023052 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045088 GO:0045089 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0055085 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2 Nup96

Protein Analysis

1043

Amino Acids

118.3

Weight (kDa)

5.22

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 816
Acc36I ACCTGC 2 cut(s) 814, 1079
AccB1I GGYRCC 1 cut(s) 1752
AccB7I CCANNNNNTGG 1 cut(s) 827
AccI GTMKAC 1 cut(s) 1611
AccII CGCG 1 cut(s) 3066
AciI CCGC 4 cut(s) 319, 2150, 2261, 2813
AclI AACGTT 1 cut(s) 2158
AclWI GGATC 9 cut(s) 194, 249, 262, 671, 684, 1338, 1351, 2252, 2595
AcsI RAATTY 3 cut(s) 533, 2140, 2854
AcuI CTGAAG 2 cut(s) 414, 3075
AcyI GRCGYC 1 cut(s) 1753
AfaI GTAC 3 cut(s) 804, 1171, 1686
AfiI CCNNNNNNNGG 4 cut(s) 110, 368, 521, 827
AhdI GACNNNNNGTC 1 cut(s) 99
AjiI CACGTC 2 cut(s) 1615, 2929
AjnI CCWGG 4 cut(s) 202, 961, 2486, 2757
AjuI GAANNNNNNNTTGG 2 cut(s) 2196, 2228
AloI GAACNNNNNNTCC 4 cut(s) 1159, 1191, 2453, 2485
Alw21I GWGCWC 3 cut(s) 496, 1703, 3046
Alw26I GTCTC 5 cut(s) 86, 433, 870, 1378, 3096
AlwI GGATC 9 cut(s) 194, 249, 262, 671, 684, 1338, 1351, 2252, 2595
AlwNI CAGNNNCTG 1 cut(s) 203
Ama87I CYCGRG 3 cut(s) 186, 926, 1788
AoxI GGCC 5 cut(s) 376, 966, 978, 2391, 2598
ApoI RAATTY 3 cut(s) 533, 2140, 2854
ArsI GACNNNNNNTTYG 2 cut(s) 2336, 2368
Asp700I GAANNNNTTC 3 cut(s) 2430, 2610, 3060
AspA2I CCTAGG 1 cut(s) 1445
AspLEI GCGC 2 cut(s) 1755, 3068
AspS9I GGNCC 8 cut(s) 966, 979, 1127, 1833, 2391, 2404, 2599, 2755
AsuHPI GGTGA 2 cut(s) 536, 653
AsuII TTCGAA 2 cut(s) 68, 904
AvaI CYCGRG 3 cut(s) 186, 926, 1788
AvaII GGWCC 4 cut(s) 1127, 1833, 2404, 2755
AvrII CCTAGG 1 cut(s) 1445
AxyI CCTNAGG 2 cut(s) 1355, 2538
BamHI GGATCC 3 cut(s) 254, 676, 1343
BanI GGYRCC 1 cut(s) 1752
BanII GRGCYC 2 cut(s) 496, 1703
BarI GAAGNNNNNNTAC 2 cut(s) 102, 134
BauI CACGAG 1 cut(s) 3003
BbsI GAAGAC 3 cut(s) 281, 591, 3063
Bbv12I GWGCWC 3 cut(s) 496, 1703, 3046
BbvCI CCTCAGC 1 cut(s) 786
BceAI ACGGC 1 cut(s) 1293
BciT130I CCWGG 4 cut(s) 204, 963, 2488, 2759
BcoDI GTCTC 5 cut(s) 86, 433, 870, 1378, 3096
BfaI CTAG 6 cut(s) 213, 1142, 1295, 1446, 1997, 2028
BfmI CTRYAG 3 cut(s) 609, 1161, 1361
BfoI RGCGCY 1 cut(s) 1756
BfuAI ACCTGC 2 cut(s) 814, 1079
BglII AGATCT 3 cut(s) 619, 884, 2329
BlnI CCTAGG 1 cut(s) 1445
BmcAI AGTACT 1 cut(s) 1171
Bme1390I CCNGG 4 cut(s) 204, 963, 2488, 2759
Bme18I GGWCC 4 cut(s) 1127, 1833, 2404, 2755
BmeRI GACNNNNNGTC 1 cut(s) 99
BmeT110I CYCGRG 3 cut(s) 186, 926, 1788
BmgBI CACGTC 2 cut(s) 1615, 2929
BmgT120I GGNCC 8 cut(s) 966, 979, 1127, 1833, 2391, 2404, 2599, 2755
BmrFI CCNGG 4 cut(s) 204, 963, 2488, 2759
BmsI GCATC 8 cut(s) 592, 643, 1075, 1377, 1753, 1948, 2293, 3073
BpiI GAAGAC 3 cut(s) 281, 591, 3063
BpmI CTGGAG 2 cut(s) 1848, 2509
Bpu10I CCTNAGC 1 cut(s) 786
Bpu14I TTCGAA 2 cut(s) 68, 904
BpuEI CTTGAG 4 cut(s) 600, 1022, 1587, 2481
BsaHI GRCGYC 1 cut(s) 1753
BsaJI CCNNGG 5 cut(s) 637, 962, 1445, 2721, 2758
BsaXI ACNNNNNCTCC 2 cut(s) 1159, 1189
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 368, 521, 827
Bse1I ACTGG 9 cut(s) 79, 688, 1052, 1177, 1716, 1782, 2127, 2196, 2838
Bse21I CCTNAGG 2 cut(s) 1355, 2538
Bse3DI GCAATG 4 cut(s) 920, 1891, 2036, 2801
BseBI CCWGG 4 cut(s) 204, 963, 2488, 2759
BseDI CCNNGG 5 cut(s) 637, 962, 1445, 2721, 2758
BseGI GGATG 7 cut(s) 821, 879, 1127, 1193, 1246, 1591, 1768
BseLI CCNNNNNNNGG 4 cut(s) 110, 368, 521, 827
BseMI GCAATG 4 cut(s) 920, 1891, 2036, 2801
BseMII CTCAG 7 cut(s) 509, 777, 881, 1736, 2127, 2248, 2709
BseNI ACTGG 9 cut(s) 79, 688, 1052, 1177, 1716, 1782, 2127, 2196, 2838
BseRI GAGGAG 2 cut(s) 803, 1894
BseYI CCCAGC 2 cut(s) 2361, 2765
BsgI GTGCAG 3 cut(s) 792, 1601, 2313
Bsh1236I CGCG 1 cut(s) 3066
BshFI GGCC 5 cut(s) 378, 968, 980, 2393, 2600
BshNI GGYRCC 1 cut(s) 1752
BsiHKAI GWGCWC 3 cut(s) 496, 1703, 3046
BsiHKCI CYCGRG 3 cut(s) 186, 926, 1788
BslFI GGGAC 2 cut(s) 498, 2768
BslI CCNNNNNNNGG 4 cut(s) 110, 368, 521, 827
BsmAI GTCTC 5 cut(s) 86, 433, 870, 1378, 3096
BsmBI CGTCTC 1 cut(s) 870
BsmFI GGGAC 2 cut(s) 498, 2768
BsmI GAATGC 1 cut(s) 700
BsnI GGCC 5 cut(s) 378, 968, 980, 2393, 2600
BsoBI CYCGRG 3 cut(s) 186, 926, 1788
Bsp119I TTCGAA 2 cut(s) 68, 904
Bsp1286I GDGCHC 3 cut(s) 496, 1703, 3046
Bsp19I CCATGG 2 cut(s) 637, 2721
BspACI CCGC 4 cut(s) 319, 2150, 2261, 2813
BspANI GGCC 5 cut(s) 378, 968, 980, 2393, 2600
BspCNI CTCAG 7 cut(s) 508, 778, 880, 1737, 2128, 2247, 2708
BspFNI CGCG 1 cut(s) 3066
BspHI TCATGA 3 cut(s) 591, 1966, 2551
BspMAI CTGCAG 2 cut(s) 613, 1365
BspMI ACCTGC 2 cut(s) 814, 1079
BspPI GGATC 9 cut(s) 194, 249, 262, 671, 684, 1338, 1351, 2252, 2595
BspT104I TTCGAA 2 cut(s) 68, 904
BspT107I GGYRCC 1 cut(s) 1752
BsrDI GCAATG 4 cut(s) 920, 1891, 2036, 2801
BsrI ACTGG 9 cut(s) 79, 688, 1052, 1177, 1716, 1782, 2127, 2196, 2838
BssECI CCNNGG 5 cut(s) 637, 962, 1445, 2721, 2758
BssNI GRCGYC 1 cut(s) 1753
BssSI CACGAG 1 cut(s) 3003
BssT1I CCWWGG 3 cut(s) 637, 1445, 2721
Bst2BI CACGAG 1 cut(s) 3003
Bst2UI CCWGG 4 cut(s) 204, 963, 2488, 2759
Bst4CI ACNGT 3 cut(s) 235, 2047, 3034
Bst6I CTCTTC 5 cut(s) 711, 771, 1323, 1982, 2124
BstACI GRCGYC 1 cut(s) 1753
BstBI TTCGAA 2 cut(s) 68, 904
BstC8I GCNNGC 5 cut(s) 390, 1941, 2231, 2292, 2712
BstDEI CTNAG 9 cut(s) 495, 786, 867, 1355, 1745, 2136, 2234, 2538, 2695
BstDSI CCRYGG 2 cut(s) 637, 2721
BstENI CCTNNNNNAGG 1 cut(s) 108
BstF5I GGATG 7 cut(s) 821, 879, 1127, 1193, 1246, 1591, 1768
BstFNI CGCG 1 cut(s) 3066
BstH2I RGCGCY 1 cut(s) 1756
BstHHI GCGC 2 cut(s) 1755, 3068
BstMAI GTCTC 5 cut(s) 86, 433, 870, 1378, 3096
BstMWI GCNNNNNNNGC 2 cut(s) 611, 2312
BstNI CCWGG 4 cut(s) 204, 963, 2488, 2759
BstNSI RCATGY 5 cut(s) 1812, 2233, 2416, 2865, 3105
BstSCI CCNGG 4 cut(s) 202, 961, 2486, 2757
BstSFI CTRYAG 3 cut(s) 609, 1161, 1361
BstUI CGCG 1 cut(s) 3066
BstV2I GAAGAC 3 cut(s) 281, 591, 3063
BstX2I RGATCY 8 cut(s) 199, 254, 619, 676, 884, 1343, 2329, 2587
BstXI CCANNNNNNTGG 4 cut(s) 364, 976, 1723, 2401
BstYI RGATCY 8 cut(s) 199, 254, 619, 676, 884, 1343, 2329, 2587
Bsu36I CCTNAGG 2 cut(s) 1355, 2538
BsuRI GGCC 5 cut(s) 378, 968, 980, 2393, 2600
BtgI CCRYGG 2 cut(s) 637, 2721
BtrI CACGTC 2 cut(s) 1615, 2929
BtsCI GGATG 7 cut(s) 821, 879, 1127, 1193, 1246, 1591, 1768
BtsI GCAGTG 2 cut(s) 2301, 3093
BtsIMutI CAGTG 8 cut(s) 72, 681, 1059, 2043, 2203, 2242, 2301, 3093
BveI ACCTGC 2 cut(s) 814, 1079
Cac8I GCNNGC 5 cut(s) 390, 1941, 2231, 2292, 2712
CaiI CAGNNNCTG 1 cut(s) 203
CciI TCATGA 3 cut(s) 591, 1966, 2551
CfoI GCGC 2 cut(s) 1755, 3068
Cfr13I GGNCC 8 cut(s) 966, 979, 1127, 1833, 2391, 2404, 2599, 2755
Csp6I GTAC 3 cut(s) 803, 1170, 1685
CspCI CAANNNNNGTGG 2 cut(s) 670, 705
CviQI GTAC 3 cut(s) 803, 1170, 1685
DdeI CTNAG 9 cut(s) 495, 786, 867, 1355, 1745, 2136, 2234, 2538, 2695
DinI GGCGCC 1 cut(s) 1754
DriI GACNNNNNGTC 1 cut(s) 99
Eam1104I CTCTTC 5 cut(s) 711, 771, 1323, 1982, 2124
Eam1105I GACNNNNNGTC 1 cut(s) 99
EarI CTCTTC 5 cut(s) 711, 771, 1323, 1982, 2124
Ecl136II GAGCTC 2 cut(s) 494, 1701
Eco130I CCWWGG 3 cut(s) 637, 1445, 2721
Eco147I AGGCCT 1 cut(s) 378
Eco24I GRGCYC 2 cut(s) 496, 1703
Eco32I GATATC 1 cut(s) 63
Eco47I GGWCC 4 cut(s) 1127, 1833, 2404, 2755
Eco53kI GAGCTC 2 cut(s) 494, 1701
Eco57I CTGAAG 2 cut(s) 414, 3075
Eco81I CCTNAGG 2 cut(s) 1355, 2538
Eco88I CYCGRG 3 cut(s) 186, 926, 1788
EcoICRI GAGCTC 2 cut(s) 494, 1701
EcoNI CCTNNNNNAGG 1 cut(s) 108
EcoO109I RGGNCCY 2 cut(s) 2599, 2755
EcoRII CCWGG 4 cut(s) 202, 961, 2486, 2757
EcoRV GATATC 1 cut(s) 63
EcoT14I CCWWGG 3 cut(s) 637, 1445, 2721
EcoT38I GRGCYC 2 cut(s) 496, 1703
EgeI GGCGCC 1 cut(s) 1754
EheI GGCGCC 1 cut(s) 1754
ErhI CCWWGG 3 cut(s) 637, 1445, 2721
Esp3I CGTCTC 1 cut(s) 870
FalI AAGNNNNNCTT 4 cut(s) 49, 81, 835, 867
FaqI GGGAC 2 cut(s) 498, 2768
FauNDI CATATG 2 cut(s) 2274, 2437
FblI GTMKAC 1 cut(s) 1611
FokI GGATG 7 cut(s) 808, 886, 1134, 1180, 1253, 1598, 1775
FriOI GRGCYC 2 cut(s) 496, 1703
FspBI CTAG 6 cut(s) 213, 1142, 1295, 1446, 1997, 2028
GlaI GCGC 2 cut(s) 1754, 3067
GsaI CCCAGC 2 cut(s) 2365, 2769
GsuI CTGGAG 2 cut(s) 1848, 2509
HaeII RGCGCY 1 cut(s) 1756
HaeIII GGCC 5 cut(s) 378, 968, 980, 2393, 2600
HhaI GCGC 2 cut(s) 1755, 3068
Hin1I GRCGYC 1 cut(s) 1753
Hin6I GCGC 2 cut(s) 1753, 3066
HinP1I GCGC 2 cut(s) 1753, 3066
HincII GTYRAC 2 cut(s) 1612, 2926
HindII GTYRAC 2 cut(s) 1612, 2926
HindIII AAGCTT 2 cut(s) 1028, 1596
HphI GGTGA 2 cut(s) 536, 653
Hpy166II GTNNAC 3 cut(s) 544, 1612, 2926
Hpy8I GTNNAC 3 cut(s) 544, 1612, 2926
Hpy99I CGWCG 2 cut(s) 1616, 1958
HpyCH4III ACNGT 3 cut(s) 235, 2047, 3034
HpyCH4IV ACGT 4 cut(s) 863, 1614, 2158, 2928
HpyF10VI GCNNNNNNNGC 2 cut(s) 611, 2312
HpyF3I CTNAG 9 cut(s) 495, 786, 867, 1355, 1745, 2136, 2234, 2538, 2695
HpySE526I ACGT 4 cut(s) 863, 1614, 2158, 2928
Hsp92I GRCGYC 1 cut(s) 1753
HspAI GCGC 2 cut(s) 1753, 3066
KasI GGCGCC 1 cut(s) 1752
LmnI GCTCC 7 cut(s) 491, 1407, 1706, 1881, 2092, 2762, 3049
LweI GCATC 8 cut(s) 592, 643, 1075, 1377, 1753, 1948, 2293, 3073
MaeI CTAG 6 cut(s) 213, 1142, 1295, 1446, 1997, 2028
MaeII ACGT 4 cut(s) 863, 1614, 2158, 2928
MaeIII GTNAC 3 cut(s) 397, 1054, 2653
MfeI CAATTG 1 cut(s) 1757
MflI RGATCY 8 cut(s) 199, 254, 619, 676, 884, 1343, 2329, 2587
MhlI GDGCHC 3 cut(s) 496, 1703, 3046
Mly113I GGCGCC 1 cut(s) 1753
MlyI GAGTC 3 cut(s) 944, 1721, 2141
MmeI TCCRAC 5 cut(s) 217, 349, 1321, 1856, 2280
MroXI GAANNNNTTC 3 cut(s) 2430, 2610, 3060
MseI TTAA 8 cut(s) 381, 510, 1026, 1817, 1974, 2145, 2885, 3017
MslI CAYNNNNRTG 5 cut(s) 593, 974, 2196, 2289, 2399
MspA1I CMGCKG 2 cut(s) 1435, 2365
MspR9I CCNGG 4 cut(s) 204, 963, 2488, 2759
MunI CAATTG 1 cut(s) 1757
Mva1269I GAATGC 1 cut(s) 700
MvaI CCWGG 4 cut(s) 204, 963, 2488, 2759
MvnI CGCG 1 cut(s) 3066
MwoI GCNNNNNNNGC 2 cut(s) 611, 2312
NarI GGCGCC 1 cut(s) 1753
NcoI CCATGG 2 cut(s) 637, 2721
NdeI CATATG 2 cut(s) 2274, 2437
NmuCI GTSAC 1 cut(s) 1054
NspI RCATGY 5 cut(s) 1812, 2233, 2416, 2865, 3105
NspV TTCGAA 2 cut(s) 68, 904
PaeI GCATGC 1 cut(s) 2233
PaeR7I CTCGAG 2 cut(s) 186, 926
PagI TCATGA 3 cut(s) 591, 1966, 2551
PceI AGGCCT 1 cut(s) 378
PcsI WCGNNNNNNNCGW 1 cut(s) 2059
PctI GAATGC 1 cut(s) 700
PdmI GAANNNNTTC 3 cut(s) 2430, 2610, 3060
PfeI GAWTC 7 cut(s) 11, 243, 796, 1286, 2483, 2501, 2837
PflFI GACNNNGTC 1 cut(s) 1068
PflMI CCANNNNNTGG 1 cut(s) 827
PfoI TCCNGGA 1 cut(s) 2486
PleI GAGTC 3 cut(s) 944, 1720, 2140
PluTI GGCGCC 1 cut(s) 1756
PpsI GAGTC 3 cut(s) 944, 1720, 2140
PpuMI RGGWCCY 1 cut(s) 2755
PsiI TTATAA 1 cut(s) 816
Psp124BI GAGCTC 2 cut(s) 496, 1703
Psp1406I AACGTT 1 cut(s) 2158
Psp5II RGGWCCY 1 cut(s) 2755
Psp6I CCWGG 4 cut(s) 202, 961, 2486, 2757
PspFI CCCAGC 2 cut(s) 2361, 2765
PspGI CCWGG 4 cut(s) 202, 961, 2486, 2757
PspPI GGNCC 8 cut(s) 966, 979, 1127, 1833, 2391, 2404, 2599, 2755
PspPPI RGGWCCY 1 cut(s) 2755
PspXI VCTCGAGB 1 cut(s) 926
PstI CTGCAG 2 cut(s) 613, 1365
PstNI CAGNNNCTG 1 cut(s) 203
PsuI RGATCY 8 cut(s) 199, 254, 619, 676, 884, 1343, 2329, 2587
PsyI GACNNNGTC 1 cut(s) 1068
PvuII CAGCTG 2 cut(s) 1435, 2365
RsaI GTAC 3 cut(s) 804, 1171, 1686
RsaNI GTAC 3 cut(s) 803, 1170, 1685
RseI CAYNNNNRTG 5 cut(s) 593, 974, 2196, 2289, 2399
SacI GAGCTC 2 cut(s) 496, 1703
SalI GTCGAC 1 cut(s) 1610
SaqAI TTAA 8 cut(s) 381, 510, 1026, 1817, 1974, 2145, 2885, 3017
Sau96I GGNCC 8 cut(s) 966, 979, 1127, 1833, 2391, 2404, 2599, 2755
ScaI AGTACT 1 cut(s) 1171
SchI GAGTC 3 cut(s) 944, 1721, 2141
ScrFI CCNGG 4 cut(s) 204, 963, 2488, 2759
SduI GDGCHC 3 cut(s) 496, 1703, 3046
SfaNI GCATC 8 cut(s) 592, 643, 1075, 1377, 1753, 1948, 2293, 3073
SfcI CTRYAG 3 cut(s) 609, 1161, 1361
SfoI GGCGCC 1 cut(s) 1754
Sfr274I CTCGAG 2 cut(s) 186, 926
SfuI TTCGAA 2 cut(s) 68, 904
SinI GGWCC 4 cut(s) 1127, 1833, 2404, 2755
SlaI CTCGAG 2 cut(s) 186, 926
SmiMI CAYNNNNRTG 5 cut(s) 593, 974, 2196, 2289, 2399
SmlI CTYRAG 6 cut(s) 186, 615, 926, 1037, 1602, 2496
SmoI CTYRAG 6 cut(s) 186, 615, 926, 1037, 1602, 2496
SphI GCATGC 1 cut(s) 2233
SseBI AGGCCT 1 cut(s) 378
SsiI CCGC 4 cut(s) 319, 2150, 2261, 2813
SspDI GGCGCC 1 cut(s) 1752
SspI AATATT 1 cut(s) 2477
SspMI CTAG 6 cut(s) 213, 1142, 1295, 1446, 1997, 2028
SstI GAGCTC 2 cut(s) 496, 1703
StuI AGGCCT 1 cut(s) 378
StyD4I CCNGG 4 cut(s) 202, 961, 2486, 2757
StyI CCWWGG 3 cut(s) 637, 1445, 2721
TaaI ACNGT 3 cut(s) 235, 2047, 3034
TaiI ACGT 4 cut(s) 866, 1617, 2161, 2931
TatI WGTACW 2 cut(s) 1169, 1684
TfiI GAWTC 7 cut(s) 11, 243, 796, 1286, 2483, 2501, 2837
Tru1I TTAA 8 cut(s) 381, 510, 1026, 1817, 1974, 2145, 2885, 3017
Tru9I TTAA 8 cut(s) 381, 510, 1026, 1817, 1974, 2145, 2885, 3017
TscAI CASTG 8 cut(s) 79, 688, 1059, 2050, 2203, 2242, 2301, 3093
TseFI GTSAC 1 cut(s) 1054
Tsp45I GTSAC 1 cut(s) 1054
TspRI CASTG 8 cut(s) 79, 688, 1059, 2050, 2203, 2242, 2301, 3093
Tth111I GACNNNGTC 1 cut(s) 1068
Van91I CCANNNNNTGG 1 cut(s) 827
VpaK11BI GGWCC 4 cut(s) 1127, 1833, 2404, 2755
XagI CCTNNNNNAGG 1 cut(s) 108
XapI RAATTY 3 cut(s) 533, 2140, 2854
XceI RCATGY 5 cut(s) 1812, 2233, 2416, 2865, 3105
XcmI CCANNNNNNNNNTGG 2 cut(s) 2524, 2830
XhoI CTCGAG 2 cut(s) 186, 926
XmaJI CCTAGG 1 cut(s) 1445
XmiI GTMKAC 1 cut(s) 1611
XmnI GAANNNNTTC 3 cut(s) 2430, 2610, 3060
XspI CTAG 6 cut(s) 213, 1142, 1295, 1446, 1997, 2028
ZrmI AGTACT 1 cut(s) 1171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.