AT2G06025

Acetyltransferase (GNAT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0003206
Physical Location & Seq
Forward (+)
2348059 .. 2352174
4116 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G06025.4

Sequence Viewer

Length: 867 bp
ATGTCGACGATTTCGATCCATCGGACTGAGACTCTACGAATCACTCACGCTCGGTCACGAATCTTCCGGCAGAGATATCGGAGAACTATCCCTCTTTGGAAATTAACAATCAATTCGAGATCTTCTGATACATCTAAGAAGGAAGAACTCTCTGTACAAATATCAATTCCTCCTCAAGTTGATCAATCAAGACCTGAAGGTTTGAGATTCGATCGTTTACAACCTCCGGAGCCAGAGTTTGGTCATGAAGATAGATTTGAGTTTGGTAAATTCGTAGCTAGAGAAGCTATGCTTGATGAAGAATATTGGACTGCAGCTTGGCTTCGTGCAGAGAGTCACTGGGAAGATCGCTCCAATGAAAGATATGTTGATAACTACAAAAGGAAATTTGCAGAGCAGGAGTTTAATGCTATTAAAAGAAGATGTAAAGGGATGCAAGGACAGAAATGCTCATGTATCGTTGCGGTAAAGAAGGAAGAGAAGCATATTAAACGTTCAGTAATCAAAAGTGTGGTTGGGACGCTTGATTTGAGTATTCGGTATTTTTTGCAGGGAGAGACCTTTCCTGGGGAAAAGGTGAAGTCTCAATTGTTCTGCAGCATAAACCAGGAAGGATCAAATAGGTATGGTTATATTGCTAATCTATGTGTTGCGAAATCAGCACGCCGCCAGGGTATTGCTTGCAACATGTTACGTTTCGCTGTCGAATCAGCCAGACTGAGTGGAGTTGAACAAGTATATGTTCATGTACATAAAAACAATTCAGTTGCTCAGGAATTATACCAGAAGACCGGTTTTAAGATTGTTGAAACAGGTAAATTTGAATCATTAGATGATGATACATACTTGCTCCAGTACACAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10

Protein Analysis

288

Amino Acids

33.61

Weight (kDa)

9.35

Isoelectric Point (pI)

49.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 151 - 266 3.6e-12 Acetyltransferase (GNAT) family
Acetyltransf_10 PF13673 190 - 270 3.1e-08 Acetyltransferase (GNAT) domain
Acetyltransf_7 PF13508 199 - 267 1.9e-09 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 239
AccI GTMKAC 1 cut(s) 5
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 2 cut(s) 464, 667
AclI AACGTT 1 cut(s) 493
AclWI GGATC 2 cut(s) 10, 622
AcsI RAATTY 3 cut(s) 269, 386, 818
AcuI CTGAAG 1 cut(s) 216
AfaI GTAC 3 cut(s) 156, 750, 857
AfiI CCNNNNNNNGG 2 cut(s) 239, 567
AflIII ACRYGT 1 cut(s) 687
AgeI ACCGGT 1 cut(s) 791
AgsI TTSAA 3 cut(s) 731, 809, 824
AjnI CCWGG 3 cut(s) 565, 606, 669
AluBI AGCT 4 cut(s) 278, 287, 317, 864
AluI AGCT 4 cut(s) 278, 287, 317, 864
Alw26I GTCTC 3 cut(s) 23, 551, 588
AlwI GGATC 2 cut(s) 10, 622
Aor13HI TCCGGA 1 cut(s) 226
ApeKI GCWGC 2 cut(s) 314, 597
ApoI RAATTY 3 cut(s) 269, 386, 818
ArsI GACNNNNNNTTYG 2 cut(s) 511, 543
AsiGI ACCGGT 1 cut(s) 791
AsuHPI GGTGA 1 cut(s) 589
BbsI GAAGAC 1 cut(s) 794
BbvI GCAGC 2 cut(s) 326, 609
BccI CCATC 1 cut(s) 27
BcgI CGANNNNNNTGC 2 cut(s) 59, 93
BciT130I CCWGG 3 cut(s) 567, 608, 671
BclI TGATCA 1 cut(s) 181
BcoDI GTCTC 3 cut(s) 23, 551, 588
BfaI CTAG 1 cut(s) 279
BfmI CTRYAG 2 cut(s) 312, 595
BglII AGATCT 1 cut(s) 119
BisI GCNGC 3 cut(s) 315, 598, 667
BlsI GCNGC 3 cut(s) 316, 599, 668
Bme1390I CCNGG 3 cut(s) 567, 608, 671
BmiI GGNNCC 1 cut(s) 231
BmrFI CCNGG 3 cut(s) 567, 608, 671
BmrI ACTGGG 1 cut(s) 349
BmsI GCATC 1 cut(s) 423
BmuI ACTGGG 1 cut(s) 349
BpiI GAAGAC 1 cut(s) 794
BpmI CTGGAG 1 cut(s) 836
Bpu10I CCTNAGC 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 159
BsaBI GATNNNNATC 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 551
BsaJI CCNNGG 2 cut(s) 566, 670
BsaWI WCCGGW 2 cut(s) 226, 791
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 2 cut(s) 239, 567
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 2 cut(s) 344, 853
Bse8I GATNNNNATC 1 cut(s) 14
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 3 cut(s) 567, 608, 671
BseDI CCNNGG 2 cut(s) 566, 670
BseGI GGATG 1 cut(s) 438
BseJI GATNNNNATC 1 cut(s) 14
BseLI CCNNNNNNNGG 2 cut(s) 239, 567
BseMII CTCAG 3 cut(s) 18, 710, 785
BseNI ACTGG 2 cut(s) 344, 853
BseRI GAGGAG 1 cut(s) 162
BseXI GCAGC 2 cut(s) 326, 609
BsgI GTGCAG 1 cut(s) 348
Bsh1285I CGRYCG 1 cut(s) 214
BshTI ACCGGT 1 cut(s) 791
BsiEI CGRYCG 1 cut(s) 214
BsiSI CCGG 3 cut(s) 67, 227, 792
BslFI GGGAC 1 cut(s) 532
BslI CCNNNNNNNGG 2 cut(s) 239, 567
BsmAI GTCTC 3 cut(s) 23, 551, 588
BsmFI GGGAC 1 cut(s) 532
Bso31I GGTCTC 1 cut(s) 551
Bsp13I TCCGGA 1 cut(s) 226
Bsp1407I TGTACA 2 cut(s) 154, 748
Bsp143I GATC 6 cut(s) 15, 119, 181, 211, 346, 614
BspACI CCGC 2 cut(s) 464, 667
BspCNI CTCAG 3 cut(s) 19, 711, 784
BspEI TCCGGA 1 cut(s) 226
BspHI TCATGA 1 cut(s) 244
BspLI GGNNCC 1 cut(s) 231
BspMAI CTGCAG 2 cut(s) 316, 599
BspPI GGATC 2 cut(s) 10, 622
BspTNI GGTCTC 1 cut(s) 551
BsrFI RCCGGY 1 cut(s) 791
BsrGI TGTACA 2 cut(s) 154, 748
BsrI ACTGG 2 cut(s) 344, 853
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 2 cut(s) 566, 670
BssMI GATC 6 cut(s) 15, 119, 181, 211, 346, 614
Bst2UI CCWGG 3 cut(s) 567, 608, 671
Bst6I CTCTTC 1 cut(s) 471
BstAUI TGTACA 2 cut(s) 154, 748
BstC8I GCNNGC 2 cut(s) 664, 682
BstDEI CTNAG 4 cut(s) 27, 135, 719, 771
BstF5I GGATG 1 cut(s) 438
BstKTI GATC 6 cut(s) 18, 122, 184, 214, 349, 617
BstMAI GTCTC 3 cut(s) 23, 551, 588
BstMBI GATC 6 cut(s) 15, 119, 181, 211, 346, 614
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 2 cut(s) 284, 659
BstNI CCWGG 3 cut(s) 567, 608, 671
BstNSI RCATGY 1 cut(s) 691
BstSCI CCNGG 3 cut(s) 565, 606, 669
BstSFI CTRYAG 2 cut(s) 312, 595
BstV1I GCAGC 2 cut(s) 326, 609
BstV2I GAAGAC 1 cut(s) 794
BstX2I RGATCY 1 cut(s) 119
BstYI RGATCY 1 cut(s) 119
BtsCI GGATG 1 cut(s) 438
BtsIMutI CAGTG 1 cut(s) 337
Cac8I GCNNGC 2 cut(s) 664, 682
CciI TCATGA 1 cut(s) 244
Cfr10I RCCGGY 1 cut(s) 791
CseI GACGC 1 cut(s) 529
Csp6I GTAC 3 cut(s) 155, 749, 856
CspAI ACCGGT 1 cut(s) 791
CviAII CATG 4 cut(s) 245, 453, 688, 746
CviJI RGCY 7 cut(s) 232, 278, 287, 317, 322, 713, 864
CviKI_1 RGCY 7 cut(s) 232, 278, 287, 317, 322, 713, 864
CviQI GTAC 3 cut(s) 155, 749, 856
DdeI CTNAG 4 cut(s) 27, 135, 719, 771
DpnI GATC 6 cut(s) 17, 121, 183, 213, 348, 616
DpnII GATC 6 cut(s) 15, 119, 181, 211, 346, 614
Eam1104I CTCTTC 1 cut(s) 471
EarI CTCTTC 1 cut(s) 471
Eco31I GGTCTC 1 cut(s) 551
Eco32I GATATC 1 cut(s) 77
Eco57I CTGAAG 1 cut(s) 216
EcoRII CCWGG 3 cut(s) 565, 606, 669
EcoRV GATATC 1 cut(s) 77
FaeI CATG 4 cut(s) 248, 456, 691, 749
FalI AAGNNNNNCTT 2 cut(s) 276, 308
FaqI GGGAC 1 cut(s) 532
FatI CATG 4 cut(s) 244, 452, 687, 745
FbaI TGATCA 1 cut(s) 181
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 3 cut(s) 315, 598, 667
FokI GGATG 1 cut(s) 445
Fsp4HI GCNGC 3 cut(s) 315, 598, 667
FspBI CTAG 1 cut(s) 279
GluI GCNGC 3 cut(s) 315, 598, 667
GsuI CTGGAG 1 cut(s) 836
HapII CCGG 3 cut(s) 67, 227, 792
HgaI GACGC 1 cut(s) 529
Hin1II CATG 4 cut(s) 248, 456, 691, 749
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 7 cut(s) 31, 39, 60, 207, 334, 707, 824
HpaII CCGG 3 cut(s) 67, 227, 792
HphI GGTGA 1 cut(s) 589
Hpy166II GTNNAC 3 cut(s) 6, 218, 858
Hpy188I TCNGA 3 cut(s) 24, 81, 127
Hpy188III TCNNGA 6 cut(s) 57, 117, 189, 227, 245, 773
Hpy8I GTNNAC 3 cut(s) 6, 218, 858
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 4 cut(s) 133, 191, 466, 605
HpyCH4IV ACGT 2 cut(s) 493, 694
HpyCH4V TGCA 7 cut(s) 314, 329, 392, 436, 550, 597, 684
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 659
HpyF3I CTNAG 4 cut(s) 27, 135, 719, 771
HpySE526I ACGT 2 cut(s) 493, 694
Hsp92II CATG 4 cut(s) 248, 456, 691, 749
Kpn2I TCCGGA 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 181
Kzo9I GATC 6 cut(s) 15, 119, 181, 211, 346, 614
LmnI GCTCC 3 cut(s) 229, 356, 855
Lsp1109I GCAGC 2 cut(s) 326, 609
LweI GCATC 1 cut(s) 423
MaeI CTAG 1 cut(s) 279
MaeII ACGT 2 cut(s) 493, 694
MaeIII GTNAC 3 cut(s) 54, 335, 690
MalI GATC 6 cut(s) 17, 121, 183, 213, 348, 616
MboI GATC 6 cut(s) 15, 119, 181, 211, 346, 614
MboII GAAGA 9 cut(s) 55, 114, 155, 260, 311, 356, 432, 488, 799
MfeI CAATTG 1 cut(s) 587
MflI RGATCY 1 cut(s) 119
MluCI AATT 9 cut(s) 101, 112, 165, 269, 386, 587, 760, 776, 818
MlyI GAGTC 2 cut(s) 25, 343
MnlI CCTC 4 cut(s) 102, 180, 183, 234
MroI TCCGGA 1 cut(s) 226
MseI TTAA 5 cut(s) 104, 405, 414, 489, 798
MspI CCGG 3 cut(s) 67, 227, 792
MspR9I CCNGG 3 cut(s) 567, 608, 671
MunI CAATTG 1 cut(s) 587
MvaI CCWGG 3 cut(s) 567, 608, 671
MwoI GCNNNNNNNGC 2 cut(s) 284, 659
NdeII GATC 6 cut(s) 15, 119, 181, 211, 346, 614
NlaIII CATG 4 cut(s) 248, 456, 691, 749
NlaIV GGNNCC 1 cut(s) 231
NmuCI GTSAC 2 cut(s) 54, 335
NspI RCATGY 1 cut(s) 691
PagI TCATGA 1 cut(s) 244
PciI ACATGT 1 cut(s) 687
PcsI WCGNNNNNNNCGW 1 cut(s) 11
PfeI GAWTC 5 cut(s) 39, 60, 207, 707, 824
PflMI CCANNNNNTGG 1 cut(s) 239
PinAI ACCGGT 1 cut(s) 791
PkrI GCNGC 3 cut(s) 316, 599, 668
Ple19I CGATCG 1 cut(s) 214
PleI GAGTC 2 cut(s) 25, 342
PpsI GAGTC 2 cut(s) 25, 342
PscI ACATGT 1 cut(s) 687
Psp1406I AACGTT 1 cut(s) 493
Psp6I CCWGG 3 cut(s) 565, 606, 669
PspGI CCWGG 3 cut(s) 565, 606, 669
PspN4I GGNNCC 1 cut(s) 231
PsrI GAACNNNNNNTAC 2 cut(s) 138, 170
PstI CTGCAG 2 cut(s) 316, 599
PsuI RGATCY 1 cut(s) 119
PvuI CGATCG 1 cut(s) 214
RsaI GTAC 3 cut(s) 156, 750, 857
RsaNI GTAC 3 cut(s) 155, 749, 856
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 5 cut(s) 104, 405, 414, 489, 798
SatI GCNGC 3 cut(s) 315, 598, 667
Sau3AI GATC 6 cut(s) 15, 119, 181, 211, 346, 614
SchI GAGTC 2 cut(s) 25, 343
ScrFI CCNGG 3 cut(s) 567, 608, 671
SfaNI GCATC 1 cut(s) 423
SfcI CTRYAG 2 cut(s) 312, 595
SmlI CTYRAG 1 cut(s) 174
SmoI CTYRAG 1 cut(s) 174
Sse9I AATT 9 cut(s) 101, 112, 165, 269, 386, 587, 760, 776, 818
SsiI CCGC 2 cut(s) 464, 667
SspI AATATT 1 cut(s) 305
SspMI CTAG 1 cut(s) 279
StyD4I CCNGG 3 cut(s) 565, 606, 669
TaiI ACGT 2 cut(s) 496, 697
TaqI TCGA 5 cut(s) 5, 14, 116, 210, 705
TaqII GACCGA 1 cut(s) 42
TasI AATT 9 cut(s) 101, 112, 165, 269, 386, 587, 760, 776, 818
TatI WGTACW 3 cut(s) 154, 748, 855
TauI GCSGC 1 cut(s) 669
TfiI GAWTC 5 cut(s) 39, 60, 207, 707, 824
Tru1I TTAA 5 cut(s) 104, 405, 414, 489, 798
Tru9I TTAA 5 cut(s) 104, 405, 414, 489, 798
TscAI CASTG 1 cut(s) 344
TseFI GTSAC 2 cut(s) 54, 335
TseI GCWGC 2 cut(s) 314, 597
Tsp45I GTSAC 2 cut(s) 54, 335
TspDTI ATGAA 4 cut(s) 261, 312, 372, 734
TspRI CASTG 1 cut(s) 344
Van91I CCANNNNNTGG 1 cut(s) 239
XapI RAATTY 3 cut(s) 269, 386, 818
XceI RCATGY 1 cut(s) 691
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 1 cut(s) 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.