Rh2BG096000

Acetyltransferase (GNAT) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0003206
Physical Location & Seq
Reverse (-)
7570904 .. 7587841
16938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG096000.1

Sequence Viewer

Length: 837 bp
ATGATGTTCACGATTTCAGTTCCGAAACCTGGACTGGTGAGATTTTCCCATGATGGAACAAGGCGTCCTCAAAAGTTTGACAGGACTGATTTCGTTTGGTCTATGAAAATGGAGTCAAAGTTTTCTCATGACAGGAAGATTGAAGAATTGTCAGTAGAGCTTCCAACACCACCTAGTCCTCATCCTGATTCGTCTAGGGACCGTGCTCTTCAATTTAACCGGGGACAACCTTCAGGTAAAGATTTAGATCCTGACGATATGTTTGAATTTGGAGGATATATTGCACGAGAAGCCATGTGCGATGAAGAATACTGGACAGCAGCATATTTACGTGCTGAAACTCGCTGGGAAGATCGAAATCATGACCGGAGTTTAATGAAATCAAAAGGCGAAGCAATGTCCAGTTTGGGAAAAAAATGCAGATGCATTGTGACGATGAAGAAGGATTCAAAGAATGTGAAACGAACTGTTCTGAAAAGCATGGTTGGAACACTTGATTTGAGGATCCGGTACTTGTTGAATGGAGAGACCTTTCCAGAGGAACAAGTAAAACCTTCCATCTTCAGCAGCTTCTCAATGACTCGCTCAAATAGATATGGTTATATTGCAAACTTGTGTGTTATCAAACCAGCACGTCGCCAGGGTGTTGCAAGAAATATGCTGCAGTTTGCTATTAAACAAGCAAAGTTGGATGAATTAGAACGGGTATATGTGCATGTTGACAGAAAGAACAAAAATGCACAGGATCTGTACGAAAAGATGGAATTTCAGATCATTGAAAGCACGAACCCTCAGTTGGAAAAAGATGAACTTTATTTTCTTTGTTTGAAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10

Protein Analysis

278

Amino Acids

32.49

Weight (kDa)

9.15

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_10 PF13673 188 - 261 6.5e-09 Acetyltransferase (GNAT) domain
Acetyltransf_1 PF00583 192 - 256 5.7e-12 Acetyltransferase (GNAT) family
FR47 PF08445 197 - 261 7e-06 FR47-like protein
Acetyltransf_7 PF13508 199 - 257 7.4e-08 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 242, 499, 512, 753
AcsI RAATTY 2 cut(s) 266, 764
AcuI CTGAAG 2 cut(s) 216, 547
AcyI GRCGYC 1 cut(s) 64
AfaI GTAC 2 cut(s) 512, 752
AfiI CCNNNNNNNGG 2 cut(s) 29, 796
AgsI TTSAA 7 cut(s) 143, 212, 266, 450, 520, 779, 829
AjiI CACGTC 1 cut(s) 635
AjnI CCWGG 2 cut(s) 28, 639
AjuI GAANNNNNNNTTGG 2 cut(s) 779, 811
AloI GAACNNNNNNTCC 2 cut(s) 49, 81
AluBI AGCT 2 cut(s) 160, 570
AluI AGCT 2 cut(s) 160, 570
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 1 cut(s) 521
AlwI GGATC 4 cut(s) 242, 499, 512, 753
AlwNI CAGNNNCTG 1 cut(s) 748
ApeKI GCWGC 3 cut(s) 320, 567, 661
ApoI RAATTY 2 cut(s) 266, 764
ArsI GACNNNNNNTTYG 2 cut(s) 245, 277
AspS9I GGNCC 1 cut(s) 199
AsuC2I CCSGG 1 cut(s) 221
AsuHPI GGTGA 1 cut(s) 49
AvaII GGWCC 1 cut(s) 199
BamHI GGATCC 1 cut(s) 504
BauI CACGAG 1 cut(s) 285
Bbv12I GWGCWC 1 cut(s) 208
BbvI GCAGC 3 cut(s) 332, 579, 648
BccI CCATC 3 cut(s) 47, 566, 754
BciT130I CCWGG 2 cut(s) 30, 641
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 1 cut(s) 521
BfaI CTAG 3 cut(s) 174, 195, 835
BfmI CTRYAG 1 cut(s) 662
BglII AGATCT 1 cut(s) 831
BisI GCNGC 3 cut(s) 321, 568, 662
BlsI GCNGC 3 cut(s) 322, 569, 663
Bme1390I CCNGG 3 cut(s) 30, 221, 641
Bme18I GGWCC 1 cut(s) 199
BmgBI CACGTC 1 cut(s) 635
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 2 cut(s) 200, 506
BmrFI CCNGG 3 cut(s) 30, 221, 641
BmsI GCATC 1 cut(s) 413
BpuMI CCSGG 1 cut(s) 221
BsaAI YACGTR 1 cut(s) 332
BsaBI GATNNNNATC 2 cut(s) 246, 357
BsaHI GRCGYC 1 cut(s) 64
BsaI GGTCTC 1 cut(s) 521
BsaJI CCNNGG 2 cut(s) 220, 640
BsaWI WCCGGW 2 cut(s) 366, 507
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 796
Bse1I ACTGG 3 cut(s) 39, 317, 402
Bse3DI GCAATG 1 cut(s) 402
Bse8I GATNNNNATC 2 cut(s) 246, 357
BseBI CCWGG 2 cut(s) 30, 641
BseDI CCNNGG 2 cut(s) 220, 640
BseGI GGATG 2 cut(s) 181, 697
BseJI GATNNNNATC 2 cut(s) 246, 357
BseLI CCNNNNNNNGG 2 cut(s) 29, 796
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 1 cut(s) 806
BseNI ACTGG 3 cut(s) 39, 317, 402
BseXI GCAGC 3 cut(s) 332, 579, 648
BseYI CCCAGC 1 cut(s) 345
BsiHKAI GWGCWC 1 cut(s) 208
BsiSI CCGG 3 cut(s) 220, 367, 508
BslFI GGGAC 2 cut(s) 212, 237
BslI CCNNNNNNNGG 2 cut(s) 29, 796
BsmAI GTCTC 1 cut(s) 521
BsmFI GGGAC 2 cut(s) 212, 237
Bso31I GGTCTC 1 cut(s) 521
Bsp1286I GDGCHC 1 cut(s) 208
Bsp143I GATC 6 cut(s) 247, 352, 504, 745, 771, 831
BspCNI CTCAG 1 cut(s) 805
BspHI TCATGA 2 cut(s) 127, 361
BspLI GGNNCC 2 cut(s) 200, 506
BspMAI CTGCAG 1 cut(s) 666
BspPI GGATC 4 cut(s) 242, 499, 512, 753
BspQI GCTCTTC 1 cut(s) 213
BspTNI GGTCTC 1 cut(s) 521
BsrDI GCAATG 1 cut(s) 402
BsrI ACTGG 3 cut(s) 39, 317, 402
BssECI CCNNGG 2 cut(s) 220, 640
BssMI GATC 6 cut(s) 247, 352, 504, 745, 771, 831
BssNI GRCGYC 1 cut(s) 64
BssSI CACGAG 1 cut(s) 285
Bst2BI CACGAG 1 cut(s) 285
Bst2UI CCWGG 2 cut(s) 30, 641
Bst4CI ACNGT 2 cut(s) 203, 469
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 1 cut(s) 64
BstBAI YACGTR 1 cut(s) 332
BstDEI CTNAG 1 cut(s) 792
BstF5I GGATG 2 cut(s) 181, 697
BstKTI GATC 6 cut(s) 250, 355, 507, 748, 774, 834
BstMAI GTCTC 1 cut(s) 521
BstMBI GATC 6 cut(s) 247, 352, 504, 745, 771, 831
BstMWI GCNNNNNNNGC 1 cut(s) 290
BstNI CCWGG 2 cut(s) 30, 641
BstNSI RCATGY 1 cut(s) 719
BstSCI CCNGG 3 cut(s) 28, 219, 639
BstSFI CTRYAG 1 cut(s) 662
BstV1I GCAGC 3 cut(s) 332, 579, 648
BstX2I RGATCY 4 cut(s) 247, 504, 745, 831
BstYI RGATCY 4 cut(s) 247, 504, 745, 831
BtgZI GCGATG 1 cut(s) 315
BtrI CACGTC 1 cut(s) 635
BtsCI GGATG 2 cut(s) 181, 697
CaiI CAGNNNCTG 1 cut(s) 748
CciI TCATGA 2 cut(s) 127, 361
Cfr13I GGNCC 1 cut(s) 199
CseI GACGC 1 cut(s) 53
Csp6I GTAC 2 cut(s) 511, 751
CviAII CATG 6 cut(s) 50, 128, 295, 362, 481, 716
CviJI RGCY 3 cut(s) 160, 293, 570
CviKI_1 RGCY 3 cut(s) 160, 293, 570
CviQI GTAC 2 cut(s) 511, 751
DdeI CTNAG 1 cut(s) 792
DpnI GATC 6 cut(s) 249, 354, 506, 747, 773, 833
DpnII GATC 6 cut(s) 247, 352, 504, 745, 771, 831
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
Eco31I GGTCTC 1 cut(s) 521
Eco47I GGWCC 1 cut(s) 199
Eco57I CTGAAG 2 cut(s) 216, 547
EcoRII CCWGG 2 cut(s) 28, 639
EcoT22I ATGCAT 1 cut(s) 428
FaeI CATG 6 cut(s) 53, 131, 298, 365, 484, 719
FalI AAGNNNNNCTT 2 cut(s) 795, 827
FaqI GGGAC 2 cut(s) 212, 237
FatI CATG 6 cut(s) 49, 127, 294, 361, 480, 715
Fnu4HI GCNGC 3 cut(s) 321, 568, 662
FokI GGATG 2 cut(s) 168, 704
Fsp4HI GCNGC 3 cut(s) 321, 568, 662
FspBI CTAG 3 cut(s) 174, 195, 835
GluI GCNGC 3 cut(s) 321, 568, 662
GsaI CCCAGC 1 cut(s) 349
HapII CCGG 3 cut(s) 220, 367, 508
HgaI GACGC 1 cut(s) 53
Hin1I GRCGYC 1 cut(s) 64
Hin1II CATG 6 cut(s) 53, 131, 298, 365, 484, 719
HincII GTYRAC 1 cut(s) 721
HindII GTYRAC 1 cut(s) 721
HinfI GANTC 4 cut(s) 113, 188, 446, 580
HpaII CCGG 3 cut(s) 220, 367, 508
HphI GGTGA 1 cut(s) 49
Hpy166II GTNNAC 2 cut(s) 9, 721
Hpy188I TCNGA 3 cut(s) 24, 474, 771
Hpy188III TCNNGA 6 cut(s) 10, 128, 185, 251, 362, 536
Hpy8I GTNNAC 2 cut(s) 9, 721
Hpy99I CGWCG 1 cut(s) 639
HpyAV CCTTC 3 cut(s) 240, 436, 564
HpyCH4III ACNGT 2 cut(s) 203, 469
HpyCH4IV ACGT 2 cut(s) 331, 634
HpyCH4V TGCA 8 cut(s) 284, 420, 426, 608, 650, 664, 715, 740
HpyF10VI GCNNNNNNNGC 1 cut(s) 290
HpyF3I CTNAG 1 cut(s) 792
HpySE526I ACGT 2 cut(s) 331, 634
Hsp92I GRCGYC 1 cut(s) 64
Hsp92II CATG 6 cut(s) 53, 131, 298, 365, 484, 719
Kzo9I GATC 6 cut(s) 247, 352, 504, 745, 771, 831
LguI GCTCTTC 1 cut(s) 213
Lsp1109I GCAGC 3 cut(s) 332, 579, 648
LweI GCATC 1 cut(s) 413
MaeI CTAG 3 cut(s) 174, 195, 835
MaeII ACGT 2 cut(s) 331, 634
MaeIII GTNAC 1 cut(s) 430
MalI GATC 6 cut(s) 249, 354, 506, 747, 773, 833
MboI GATC 6 cut(s) 247, 352, 504, 745, 771, 831
MboII GAAGA 7 cut(s) 148, 155, 200, 317, 362, 451, 553
MflI RGATCY 4 cut(s) 247, 504, 745, 831
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 5 cut(s) 146, 212, 266, 695, 764
MlyI GAGTC 2 cut(s) 122, 574
MmeI TCCRAC 4 cut(s) 188, 466, 669, 777
MnlI CCTC 6 cut(s) 78, 189, 266, 495, 532, 801
Mph1103I ATGCAT 1 cut(s) 428
MseI TTAA 3 cut(s) 216, 374, 675
MspI CCGG 3 cut(s) 220, 367, 508
MspR9I CCNGG 3 cut(s) 30, 221, 641
MvaI CCWGG 2 cut(s) 30, 641
MwoI GCNNNNNNNGC 1 cut(s) 290
NciI CCSGG 1 cut(s) 221
NdeII GATC 6 cut(s) 247, 352, 504, 745, 771, 831
NlaIII CATG 6 cut(s) 53, 131, 298, 365, 484, 719
NlaIV GGNNCC 2 cut(s) 200, 506
NmuCI GTSAC 1 cut(s) 430
NsiI ATGCAT 1 cut(s) 428
NspI RCATGY 1 cut(s) 719
PagI TCATGA 2 cut(s) 127, 361
PciSI GCTCTTC 1 cut(s) 213
PfeI GAWTC 2 cut(s) 188, 446
PkrI GCNGC 3 cut(s) 322, 569, 663
PleI GAGTC 2 cut(s) 121, 574
PpsI GAGTC 2 cut(s) 121, 574
Ppu21I YACGTR 1 cut(s) 332
Psp6I CCWGG 2 cut(s) 28, 639
PspFI CCCAGC 1 cut(s) 345
PspGI CCWGG 2 cut(s) 28, 639
PspN4I GGNNCC 2 cut(s) 200, 506
PspPI GGNCC 1 cut(s) 199
PstI CTGCAG 1 cut(s) 666
PstNI CAGNNNCTG 1 cut(s) 748
PsuI RGATCY 4 cut(s) 247, 504, 745, 831
RsaI GTAC 2 cut(s) 512, 752
RsaNI GTAC 2 cut(s) 511, 751
SapI GCTCTTC 1 cut(s) 213
SaqAI TTAA 3 cut(s) 216, 374, 675
SatI GCNGC 3 cut(s) 321, 568, 662
Sau3AI GATC 6 cut(s) 247, 352, 504, 745, 771, 831
Sau96I GGNCC 1 cut(s) 199
SchI GAGTC 2 cut(s) 122, 574
ScrFI CCNGG 3 cut(s) 30, 221, 641
SduI GDGCHC 1 cut(s) 208
SfaNI GCATC 1 cut(s) 413
SfcI CTRYAG 1 cut(s) 662
SinI GGWCC 1 cut(s) 199
Sse9I AATT 5 cut(s) 146, 212, 266, 695, 764
SspMI CTAG 3 cut(s) 174, 195, 835
StyD4I CCNGG 3 cut(s) 28, 219, 639
TaaI ACNGT 2 cut(s) 203, 469
TaiI ACGT 2 cut(s) 334, 637
TaqI TCGA 1 cut(s) 355
TasI AATT 5 cut(s) 146, 212, 266, 695, 764
TfiI GAWTC 2 cut(s) 188, 446
Tru1I TTAA 3 cut(s) 216, 374, 675
Tru9I TTAA 3 cut(s) 216, 374, 675
TseFI GTSAC 1 cut(s) 430
TseI GCWGC 3 cut(s) 320, 567, 661
Tsp45I GTSAC 1 cut(s) 430
TspDTI ATGAA 6 cut(s) 119, 318, 392, 452, 708, 822
VpaK11BI GGWCC 1 cut(s) 199
XapI RAATTY 2 cut(s) 266, 764
XceI RCATGY 1 cut(s) 719
XspI CTAG 3 cut(s) 174, 195, 835
Zsp2I ATGCAT 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.