Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003206

Physical Location & Seq

Genomic Coordinates Forward (+)

18684591 .. 18688983

Gene Structure 4393 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G199400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGTTGACGATTTCAATTCACAAGCCTATGCTGTTGAGATATTCCCATGTCAGAATTAGAAGTCATCAAAAGTTTCACAAGATTGATCCCATTCCATTCGTGAAAATGGAGGCAAAGTCTTCCCAAACGAGGAAGATGGAAGAACTGTCAGTAAAGCATCCAACACCATTTATTCCTAAGTTGGAACCATCAGGGGAGCCTGATCTACAATTTGACCGGCTGCAAACATCAGATCAAGATTTAGTTCAAGAGAAAAAGTTTGAATTTGGACGATTTATTGCACGAGAGGCCATCCTTGATGAAGAATTGTGGACAGCAGCATGGTTACGTGCAGAAAGTCACTGGGAGGATCGGGCAAATGACCGATTTGCTGACAGCTACAAAAGGAAATTTTCAGATCAGGAATTTAATGCTATAAAAAGACGAAGAAAAGGGGAATATGGGCAGAAATGCTCATGCATTATCACGGTGAGGAAGGAACCAAAGAATGTGAAATACACTGTTGTGAAAAGTGTAGTTGGAACACTTGATTTGAGCATCCGGTACTTGTTGGACGGAGAGACCTTTCCAGGGGAGCGGGAAAAGGCTCCTCCCTTTTGCAGCATCAGCAGAACGCAGTCAAATAGATATGGTTATATTTCAAACTTATGCGTCTCCAAAGCAGCACGTTGCCAGGGTATTGCAAGCAGTATGATGCATTTTGCTATTAGATTAGCATTGTTAGAGGGTGCAGAACAGGTTTATGTGCATGTGCATAGAAAGAACAAACCAGCGCAGGAACTGTACCGAAAGATGGGCTTTGAGATGGTTGAAAAGGCGACGTCTCAATTAGAAGAAGAGCAAACTTATTTGCTTCGTTTCAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1 Acetyltransf_10

Protein Analysis

290

Amino Acids

33.78

Weight (kDa)

9.41

Isoelectric Point (pI)

44.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003206)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06025 AT2G06025 AT2G06025 AT2G06025 AT2G06025 AT2G06025 AT2G06025
fragaria_vesca	FvH4_1g08620 FvH4_1g08620 FvH4_1g08620 FvH4_1g08620 FvH4_1g08620 FvH4_1g08620
malus_domestica	MD02G1091000.v1.1 MD15G1217100.v1.1
prunus_persica	Prupe.7G199400_v2.0.a1 Prupe.7G199400_v2.0.a1 Prupe.7G199400_v2.0.a1
pyrus_communis	pycom01g07710 pycom02g07250 pycom15g19270
rosa_chinensis	RchiOBHm_Chr2g0094881
rosa_laevigata	RLG00000016528
rosa_multiflora	Rmu_sc0006611.1_g000003
rosa_roxburghii	Rroxscaffold_2G00146800
rosa_rugosa	Rorug02G0048500 Rorug02G0048600 Rorug02G0048600 Rorug02G0048600 Rorug02G0048600
rosa_samantha	Rh2AG095100 Rh2BG096000 Rh2BG096100 Rh2CG097900 Rh2CG098000 Rh2DG094700
rosa_wichuraiana	Rw2G007150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	824
AccBSI	CCGCTC	1 cut(s)	577
AciI	CCGC	1 cut(s)	577
AclWI	GGATC	2 cut(s)	80, 357
AcsI	RAATTY	3 cut(s)	263, 389, 404
AcyI	GRCGYC	1 cut(s)	821
AfaI	GTAC	2 cut(s)	545, 785
AfiI	CCNNNNNNNGG	3 cut(s)	129, 570, 793
AgsI	TTSAA	6 cut(s)	15, 248, 263, 642, 812, 862
AjnI	CCWGG	2 cut(s)	568, 672
AleI	CACNNNNGTG	1 cut(s)	503
AluBI	AGCT	1 cut(s)	378
AluI	AGCT	1 cut(s)	378
Alw26I	GTCTC	3 cut(s)	554, 658, 828
AlwI	GGATC	2 cut(s)	80, 357
AlwNI	CAGNNNCTG	1 cut(s)	781
AoxI	GGCC	2 cut(s)	288, 864
ApeKI	GCWGC	4 cut(s)	220, 317, 600, 662
ApoI	RAATTY	3 cut(s)	263, 389, 404
AspLEI	GCGC	1 cut(s)	775
AsuHPI	GGTGA	1 cut(s)	481
BauI	CACGAG	1 cut(s)	282
BbsI	GAAGAC	1 cut(s)	111
BbvI	GCAGC	4 cut(s)	207, 329, 612, 674
BccI	CCATC	5 cut(s)	130, 196, 299, 787, 799
BciT130I	CCWGG	2 cut(s)	570, 674
BcoDI	GTCTC	3 cut(s)	554, 658, 828
BisI	GCNGC	4 cut(s)	221, 318, 601, 663
BlsI	GCNGC	4 cut(s)	222, 319, 602, 664
Bme1390I	CCNGG	2 cut(s)	570, 674
BmiI	GGNNCC	4 cut(s)	186, 198, 480, 588
BmrFI	CCNGG	2 cut(s)	570, 674
BmrI	ACTGGG	1 cut(s)	352
BmsI	GCATC	4 cut(s)	166, 546, 612, 684
BmuI	ACTGGG	1 cut(s)	352
BpiI	GAAGAC	1 cut(s)	111
BsaAI	YACGTR	1 cut(s)	329
BsaHI	GRCGYC	1 cut(s)	821
BsaI	GGTCTC	1 cut(s)	554
BsaJI	CCNNGG	2 cut(s)	569, 673
BsaWI	WCCGGW	1 cut(s)	540
BsaXI	ACNNNNNCTCC	2 cut(s)	101, 131
Bsc4I	CCNNNNNNNGG	3 cut(s)	129, 570, 793
Bse118I	RCCGGY	1 cut(s)	216
Bse1I	ACTGG	1 cut(s)	347
BseBI	CCWGG	2 cut(s)	570, 674
BseDI	CCNNGG	2 cut(s)	569, 673
BseGI	GGATG	3 cut(s)	157, 291, 537
BseLI	CCNNNNNNNGG	3 cut(s)	129, 570, 793
BseNI	ACTGG	1 cut(s)	347
BseRI	GAGGAG	1 cut(s)	579
BseXI	GCAGC	4 cut(s)	207, 329, 612, 674
BsgI	GTGCAG	2 cut(s)	351, 750
BshFI	GGCC	2 cut(s)	290, 866
BsiSI	CCGG	2 cut(s)	217, 541
BslI	CCNNNNNNNGG	3 cut(s)	129, 570, 793
BsmAI	GTCTC	3 cut(s)	554, 658, 828
BsmBI	CGTCTC	2 cut(s)	658, 828
BsnI	GGCC	2 cut(s)	290, 866
Bso31I	GGTCTC	1 cut(s)	554
Bsp143I	GATC	5 cut(s)	85, 202, 232, 349, 397
BspACI	CCGC	1 cut(s)	577
BspANI	GGCC	2 cut(s)	290, 866
BspLI	GGNNCC	4 cut(s)	186, 198, 480, 588
BspPI	GGATC	2 cut(s)	80, 357
BspQI	GCTCTTC	1 cut(s)	831
BspTNI	GGTCTC	1 cut(s)	554
BsrBI	CCGCTC	1 cut(s)	577
BsrFI	RCCGGY	1 cut(s)	216
BsrI	ACTGG	1 cut(s)	347
BssAI	RCCGGY	1 cut(s)	216
BssECI	CCNNGG	2 cut(s)	569, 673
BssMI	GATC	5 cut(s)	85, 202, 232, 349, 397
BssNI	GRCGYC	1 cut(s)	821
BssSI	CACGAG	1 cut(s)	282
Bst2BI	CACGAG	1 cut(s)	282
Bst2UI	CCWGG	2 cut(s)	570, 674
Bst4CI	ACNGT	4 cut(s)	147, 469, 502, 783
Bst6I	CTCTTC	1 cut(s)	831
BstACI	GRCGYC	1 cut(s)	821
BstBAI	YACGTR	1 cut(s)	329
BstC8I	GCNNGC	1 cut(s)	685
BstDEI	CTNAG	1 cut(s)	177
BstF5I	GGATG	3 cut(s)	157, 291, 537
BstHHI	GCGC	1 cut(s)	775
BstKTI	GATC	5 cut(s)	88, 205, 235, 352, 400
BstMAI	GTCTC	3 cut(s)	554, 658, 828
BstMBI	GATC	5 cut(s)	85, 202, 232, 349, 397
BstMWI	GCNNNNNNNGC	2 cut(s)	287, 606
BstNI	CCWGG	2 cut(s)	570, 674
BstNSI	RCATGY	1 cut(s)	752
BstSCI	CCNGG	2 cut(s)	568, 672
BstV1I	GCAGC	4 cut(s)	207, 329, 612, 674
BstV2I	GAAGAC	1 cut(s)	111
BsuRI	GGCC	2 cut(s)	290, 866
BtsCI	GGATG	3 cut(s)	157, 291, 537
BtsIMutI	CAGTG	2 cut(s)	340, 498
Cac8I	GCNNGC	1 cut(s)	685
CaiI	CAGNNNCTG	1 cut(s)	781
CfoI	GCGC	1 cut(s)	775
Cfr10I	RCCGGY	1 cut(s)	216
CseI	GACGC	1 cut(s)	640
Csp6I	GTAC	2 cut(s)	544, 784
CviAII	CATG	4 cut(s)	47, 321, 456, 749
CviJI	RGCY	8 cut(s)	25, 199, 220, 290, 378, 587, 798, 866
CviKI_1	RGCY	8 cut(s)	25, 199, 220, 290, 378, 587, 798, 866
CviQI	GTAC	2 cut(s)	544, 784
DdeI	CTNAG	1 cut(s)	177
DpnI	GATC	5 cut(s)	87, 204, 234, 351, 399
DpnII	GATC	5 cut(s)	85, 202, 232, 349, 397
Eam1104I	CTCTTC	1 cut(s)	831
EarI	CTCTTC	1 cut(s)	831
Eco147I	AGGCCT	1 cut(s)	866
Eco31I	GGTCTC	1 cut(s)	554
EcoRII	CCWGG	2 cut(s)	568, 672
EcoT22I	ATGCAT	2 cut(s)	461, 699
Esp3I	CGTCTC	2 cut(s)	658, 828
FaeI	CATG	4 cut(s)	50, 324, 459, 752
FalI	AAGNNNNNCTT	2 cut(s)	782, 814
FatI	CATG	4 cut(s)	46, 320, 455, 748
FauI	CCCGC	1 cut(s)	570
Fnu4HI	GCNGC	4 cut(s)	221, 318, 601, 663
FokI	GGATG	3 cut(s)	144, 278, 524
Fsp4HI	GCNGC	4 cut(s)	221, 318, 601, 663
GlaI	GCGC	1 cut(s)	774
GluI	GCNGC	4 cut(s)	221, 318, 601, 663
HaeIII	GGCC	2 cut(s)	290, 866
HapII	CCGG	2 cut(s)	217, 541
HgaI	GACGC	1 cut(s)	640
HhaI	GCGC	1 cut(s)	775
Hin1I	GRCGYC	1 cut(s)	821
Hin1II	CATG	4 cut(s)	50, 324, 459, 752
Hin6I	GCGC	1 cut(s)	773
HinP1I	GCGC	1 cut(s)	773
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HpaII	CCGG	2 cut(s)	217, 541
HphI	GGTGA	1 cut(s)	481
Hpy166II	GTNNAC	2 cut(s)	6, 312
Hpy188I	TCNGA	3 cut(s)	53, 232, 397
Hpy188III	TCNNGA	4 cut(s)	100, 236, 248, 401
Hpy8I	GTNNAC	2 cut(s)	6, 312
Hpy99I	CGWCG	1 cut(s)	823
HpyAV	CCTTC	1 cut(s)	469
HpyCH4III	ACNGT	4 cut(s)	147, 469, 502, 783
HpyCH4IV	ACGT	3 cut(s)	328, 667, 821
HpyF10VI	GCNNNNNNNGC	2 cut(s)	287, 606
HpyF3I	CTNAG	1 cut(s)	177
HpySE526I	ACGT	3 cut(s)	328, 667, 821
Hsp92I	GRCGYC	1 cut(s)	821
Hsp92II	CATG	4 cut(s)	50, 324, 459, 752
HspAI	GCGC	1 cut(s)	773
Kzo9I	GATC	5 cut(s)	85, 202, 232, 349, 397
LguI	GCTCTTC	1 cut(s)	831
LmnI	GCTCC	3 cut(s)	196, 574, 592
Lsp1109I	GCAGC	4 cut(s)	207, 329, 612, 674
LweI	GCATC	4 cut(s)	166, 546, 612, 684
MaeII	ACGT	3 cut(s)	328, 667, 821
MaeIII	GTNAC	2 cut(s)	324, 338
MalI	GATC	5 cut(s)	87, 204, 234, 351, 399
MbiI	CCGCTC	1 cut(s)	577
MboI	GATC	5 cut(s)	85, 202, 232, 349, 397
MboII	GAAGA	7 cut(s)	111, 145, 152, 314, 438, 845, 848
MluCI	AATT	8 cut(s)	15, 54, 209, 263, 305, 389, 404, 827
MmeI	TCCRAC	4 cut(s)	162, 185, 499, 531
MnlI	CCTC	7 cut(s)	103, 123, 280, 340, 465, 600, 718
Mph1103I	ATGCAT	2 cut(s)	461, 699
MseI	TTAA	1 cut(s)	408
MslI	CAYNNNNRTG	1 cut(s)	503
MspI	CCGG	2 cut(s)	217, 541
MspR9I	CCNGG	2 cut(s)	570, 674
MvaI	CCWGG	2 cut(s)	570, 674
MwoI	GCNNNNNNNGC	2 cut(s)	287, 606
NdeII	GATC	5 cut(s)	85, 202, 232, 349, 397
NlaIII	CATG	4 cut(s)	50, 324, 459, 752
NlaIV	GGNNCC	4 cut(s)	186, 198, 480, 588
NmuCI	GTSAC	1 cut(s)	338
NsiI	ATGCAT	2 cut(s)	461, 699
NspI	RCATGY	1 cut(s)	752
OliI	CACNNNNGTG	1 cut(s)	503
PceI	AGGCCT	1 cut(s)	866
PciSI	GCTCTTC	1 cut(s)	831
PkrI	GCNGC	4 cut(s)	222, 319, 602, 664
Ppu21I	YACGTR	1 cut(s)	329
Psp6I	CCWGG	2 cut(s)	568, 672
PspGI	CCWGG	2 cut(s)	568, 672
PspN4I	GGNNCC	4 cut(s)	186, 198, 480, 588
PstNI	CAGNNNCTG	1 cut(s)	781
RsaI	GTAC	2 cut(s)	545, 785
RsaNI	GTAC	2 cut(s)	544, 784
RseI	CAYNNNNRTG	1 cut(s)	503
SapI	GCTCTTC	1 cut(s)	831
SaqAI	TTAA	1 cut(s)	408
SatI	GCNGC	4 cut(s)	221, 318, 601, 663
Sau3AI	GATC	5 cut(s)	85, 202, 232, 349, 397
ScrFI	CCNGG	2 cut(s)	570, 674
SetI	ASST	6 cut(s)	331, 380, 566, 670, 741, 824
SfaNI	GCATC	4 cut(s)	166, 546, 612, 684
SmiMI	CAYNNNNRTG	1 cut(s)	503
Sse9I	AATT	8 cut(s)	15, 54, 209, 263, 305, 389, 404, 827
SseBI	AGGCCT	1 cut(s)	866
SsiI	CCGC	1 cut(s)	577
StuI	AGGCCT	1 cut(s)	866
StyD4I	CCNGG	2 cut(s)	568, 672
TaaI	ACNGT	4 cut(s)	147, 469, 502, 783
TaiI	ACGT	3 cut(s)	331, 670, 824
TaqII	GACCGA	1 cut(s)	378
TasI	AATT	8 cut(s)	15, 54, 209, 263, 305, 389, 404, 827
Tru1I	TTAA	1 cut(s)	408
Tru9I	TTAA	1 cut(s)	408
TscAI	CASTG	2 cut(s)	347, 505
TseFI	GTSAC	1 cut(s)	338
TseI	GCWGC	4 cut(s)	220, 317, 600, 662
Tsp45I	GTSAC	1 cut(s)	338
TspDTI	ATGAA	1 cut(s)	315
TspGWI	ACGGA	1 cut(s)	570
TspRI	CASTG	2 cut(s)	347, 505
XapI	RAATTY	3 cut(s)	263, 389, 404
XceI	RCATGY	1 cut(s)	752
ZraI	GACGTC	1 cut(s)	822
Zsp2I	ATGCAT	2 cut(s)	461, 699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.