AT2G07656

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0016475
Physical Location & Seq
Forward (+)
3458281 .. 3461448
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G07656.1

Sequence Viewer

Length: 822 bp
ATGCTAAGTCCAATTCCTCAATATTCTTCTTCTTCAGTGGCCCAAGCAAGATCATCTATCAGAGAGGATAGGGTCCAAGGTTCGGTAACCTGGGTAAAGGCTGCCTTGCTTCCCGTTGTGGAATCTTTTCTAATCCTTTTGGCCGCTTCTTTCCACTCGGACCATAGGGAAGTCAGAACGGAAACCAACAAAGGACAACACAAACAGTCTATCTCGGCAGGAGCAGAGCGGCTACGCAAACCGCCTGGCTATTCATATTCCGACCTGAGGAGTAAGACTCTCGCAGCTACTCAGGATATGGCTTTACGAGTTCCTTGTCATGCTGATAAGAGGCCAGTCGATGAGGCTCTTGAACAAGTTCCCGGCGAATTGAGGAAGAGGAACGAAGGTACTCAGCCTCCTGGGGCAAGTGGGAGCGACACACTGAATGAACCAACTCCAATGGAGCAGGATCAAGAAGAAGTGAAGCTACGTAAAAGTGAGCGTGGTAGAATCTCTCGTCGTCGATTTGAGATTGAGGGAGATCCGGGGAATCTTATTCTGTCACCCAAAACGACCACTCCTTCTGTTCTTGAGTTTTGGGAATTTCCTTCCATTGGCTGGTTAAAATTCAATACGGATGGTGCTTCCAAGAGGAACCTTTTCTTGCATGGTGCTGCAACGGGACATTCTGGTAAGTCGGGTGCTGGTGGCCTTCTCCGAGACTGTTCAGGAACATGGATCTATGGGTATACCTGCAAAATAGCTTTCTCTACGAGCCTACAAGCTTCACTTTGGTTTAGCTTCCAACTAAGGCTAAGGGAGTTGTTTCCACGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

273

Amino Acids

30.32

Weight (kDa)

9.27

Isoelectric Point (pI)

51.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 743
AccB7I CCANNNNNTGG 1 cut(s) 600
AccBSI CCGCTC 1 cut(s) 229
AccI GTMKAC 1 cut(s) 731
AciI CCGC 3 cut(s) 144, 229, 242
AclWI GGATC 3 cut(s) 459, 518, 728
AcoI YGGCCR 1 cut(s) 141
AcsI RAATTY 2 cut(s) 584, 608
AcuI CTGAAG 1 cut(s) 18
AfaI GTAC 1 cut(s) 391
AfiI CCNNNNNNNGG 4 cut(s) 82, 267, 596, 600
AgsI TTSAA 2 cut(s) 353, 613
AjnI CCWGG 3 cut(s) 89, 244, 400
AluBI AGCT 5 cut(s) 287, 469, 746, 767, 783
AluI AGCT 5 cut(s) 287, 469, 746, 767, 783
Alw26I GTCTC 1 cut(s) 696
AlwI GGATC 3 cut(s) 459, 518, 728
AoxI GGCC 4 cut(s) 39, 141, 332, 691
ApeKI GCWGC 3 cut(s) 101, 284, 656
ApoI RAATTY 2 cut(s) 584, 608
Asp700I GAANNNNTTC 3 cut(s) 126, 357, 641
AspS9I GGNCC 3 cut(s) 40, 73, 160
AsuC2I CCSGG 2 cut(s) 363, 528
AsuHPI GGTGA 1 cut(s) 537
AvaII GGWCC 2 cut(s) 73, 160
AxyI CCTNAGG 1 cut(s) 266
BarI GAAGNNNNNNTAC 2 cut(s) 453, 485
BbvI GCAGC 3 cut(s) 88, 296, 643
BccI CCATC 1 cut(s) 614
BciT130I CCWGG 3 cut(s) 91, 246, 402
BcnI CCSGG 2 cut(s) 363, 528
BcoDI GTCTC 1 cut(s) 696
BfuAI ACCTGC 1 cut(s) 743
BisI GCNGC 5 cut(s) 102, 144, 230, 285, 657
BlsI GCNGC 5 cut(s) 103, 145, 231, 286, 658
Bme1390I CCNGG 5 cut(s) 91, 246, 363, 402, 528
Bme18I GGWCC 2 cut(s) 73, 160
BmgT120I GGNCC 3 cut(s) 40, 73, 160
BmiI GGNNCC 2 cut(s) 74, 638
BmrFI CCNGG 5 cut(s) 91, 246, 363, 402, 528
BplI GAGNNNNNCTC 2 cut(s) 262, 294
Bpu10I CCTNAGC 1 cut(s) 797
BpuEI CTTGAG 1 cut(s) 593
BpuMI CCSGG 2 cut(s) 363, 528
BsaAI YACGTR 1 cut(s) 473
BsaJI CCNNGG 5 cut(s) 76, 90, 401, 527, 812
BsaXI ACNNNNNCTCC 4 cut(s) 382, 412, 544, 574
Bsc4I CCNNNNNNNGG 4 cut(s) 82, 267, 596, 600
Bse1I ACTGG 1 cut(s) 335
Bse21I CCTNAGG 1 cut(s) 266
BseBI CCWGG 3 cut(s) 91, 246, 402
BseDI CCNNGG 5 cut(s) 76, 90, 401, 527, 812
BseGI GGATG 1 cut(s) 625
BseLI CCNNNNNNNGG 4 cut(s) 82, 267, 596, 600
BseMII CTCAG 3 cut(s) 257, 305, 407
BseNI ACTGG 1 cut(s) 335
BseRI GAGGAG 1 cut(s) 283
BseXI GCAGC 3 cut(s) 88, 296, 643
BshFI GGCC 4 cut(s) 41, 143, 334, 693
BsiSI CCGG 2 cut(s) 363, 527
BslFI GGGAC 1 cut(s) 678
BslI CCNNNNNNNGG 4 cut(s) 82, 267, 596, 600
BsmAI GTCTC 1 cut(s) 696
BsmFI GGGAC 1 cut(s) 678
BsnI GGCC 4 cut(s) 41, 143, 334, 693
Bsp143I GATC 4 cut(s) 50, 451, 523, 720
BspACI CCGC 3 cut(s) 144, 229, 242
BspANI GGCC 4 cut(s) 41, 143, 334, 693
BspCNI CTCAG 3 cut(s) 258, 304, 406
BspLI GGNNCC 2 cut(s) 74, 638
BspMI ACCTGC 1 cut(s) 743
BspPI GGATC 3 cut(s) 459, 518, 728
BsrBI CCGCTC 1 cut(s) 229
BsrI ACTGG 1 cut(s) 335
BssECI CCNNGG 5 cut(s) 76, 90, 401, 527, 812
BssMI GATC 4 cut(s) 50, 451, 523, 720
BssNAI GTATAC 1 cut(s) 732
BssT1I CCWWGG 1 cut(s) 76
Bst1107I GTATAC 1 cut(s) 732
Bst2UI CCWGG 3 cut(s) 91, 246, 402
Bst4CI ACNGT 2 cut(s) 207, 707
Bst6I CTCTTC 1 cut(s) 371
BstBAI YACGTR 1 cut(s) 473
BstDEI CTNAG 6 cut(s) 5, 266, 291, 393, 791, 797
BstDSI CCRYGG 1 cut(s) 812
BstEII GGTNACC 1 cut(s) 85
BstF5I GGATG 1 cut(s) 625
BstKTI GATC 4 cut(s) 53, 454, 526, 723
BstMAI GTCTC 1 cut(s) 696
BstMBI GATC 4 cut(s) 50, 451, 523, 720
BstNI CCWGG 3 cut(s) 91, 246, 402
BstPI GGTNACC 1 cut(s) 85
BstSCI CCNGG 5 cut(s) 89, 244, 361, 400, 526
BstSNI TACGTA 1 cut(s) 473
BstV1I GCAGC 3 cut(s) 88, 296, 643
BstX2I RGATCY 2 cut(s) 523, 720
BstYI RGATCY 2 cut(s) 523, 720
BstZ17I GTATAC 1 cut(s) 732
Bsu36I CCTNAGG 1 cut(s) 266
BsuRI GGCC 4 cut(s) 41, 143, 334, 693
BtgI CCRYGG 1 cut(s) 812
BtsCI GGATG 1 cut(s) 625
BtsIMutI CAGTG 2 cut(s) 42, 422
BveI ACCTGC 1 cut(s) 743
Cfr13I GGNCC 3 cut(s) 40, 73, 160
Csp6I GTAC 1 cut(s) 390
CviAII CATG 3 cut(s) 320, 650, 717
CviQI GTAC 1 cut(s) 390
DdeI CTNAG 6 cut(s) 5, 266, 291, 393, 791, 797
DpnI GATC 4 cut(s) 52, 453, 525, 722
DpnII GATC 4 cut(s) 50, 451, 523, 720
EaeI YGGCCR 1 cut(s) 141
Eam1104I CTCTTC 1 cut(s) 371
EarI CTCTTC 1 cut(s) 371
Eco105I TACGTA 1 cut(s) 473
Eco130I CCWWGG 1 cut(s) 76
Eco47I GGWCC 2 cut(s) 73, 160
Eco57I CTGAAG 1 cut(s) 18
Eco81I CCTNAGG 1 cut(s) 266
Eco91I GGTNACC 1 cut(s) 85
EcoO65I GGTNACC 1 cut(s) 85
EcoRII CCWGG 3 cut(s) 89, 244, 400
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
FaeI CATG 3 cut(s) 323, 653, 720
FaiI YATR 8 cut(s) 165, 256, 299, 321, 651, 718, 726, 732
FalI AAGNNNNNCTT 4 cut(s) 89, 121, 756, 788
FaqI GGGAC 1 cut(s) 678
FatI CATG 3 cut(s) 319, 649, 716
FblI GTMKAC 1 cut(s) 731
Fnu4HI GCNGC 5 cut(s) 102, 144, 230, 285, 657
FokI GGATG 1 cut(s) 632
Fsp4HI GCNGC 5 cut(s) 102, 144, 230, 285, 657
GluI GCNGC 5 cut(s) 102, 144, 230, 285, 657
HaeIII GGCC 4 cut(s) 41, 143, 334, 693
HapII CCGG 2 cut(s) 363, 527
Hin1II CATG 3 cut(s) 323, 653, 720
HindIII AAGCTT 1 cut(s) 765
HinfI GANTC 4 cut(s) 122, 277, 492, 532
HpaII CCGG 2 cut(s) 363, 527
HphI GGTGA 1 cut(s) 537
Hpy166II GTNNAC 1 cut(s) 732
Hpy188I TCNGA 5 cut(s) 62, 160, 176, 262, 701
Hpy188III TCNNGA 5 cut(s) 293, 350, 455, 572, 711
Hpy8I GTNNAC 1 cut(s) 732
Hpy99I CGWCG 2 cut(s) 504, 507
HpyAV CCTTC 4 cut(s) 380, 573, 600, 704
HpyCH4III ACNGT 2 cut(s) 207, 707
HpyCH4IV ACGT 1 cut(s) 472
HpyCH4V TGCA 3 cut(s) 649, 659, 738
HpyF3I CTNAG 6 cut(s) 5, 266, 291, 393, 791, 797
HpySE526I ACGT 1 cut(s) 472
Hsp92II CATG 3 cut(s) 323, 653, 720
Kzo9I GATC 4 cut(s) 50, 451, 523, 720
LmnI GCTCC 3 cut(s) 221, 414, 445
Lsp1109I GCAGC 3 cut(s) 88, 296, 643
MaeII ACGT 1 cut(s) 472
MaeIII GTNAC 2 cut(s) 85, 543
MalI GATC 4 cut(s) 52, 453, 525, 722
MbiI CCGCTC 1 cut(s) 229
MboI GATC 4 cut(s) 50, 451, 523, 720
MboII GAAGA 5 cut(s) 18, 21, 24, 388, 470
MflI RGATCY 2 cut(s) 523, 720
MluCI AATT 4 cut(s) 12, 368, 584, 608
MlyI GAGTC 1 cut(s) 271
MmeI TCCRAC 2 cut(s) 285, 811
MroXI GAANNNNTTC 3 cut(s) 126, 357, 641
MseI TTAA 1 cut(s) 605
MspI CCGG 2 cut(s) 363, 527
MspR9I CCNGG 5 cut(s) 91, 246, 363, 402, 528
MvaI CCWGG 3 cut(s) 91, 246, 402
NciI CCSGG 2 cut(s) 363, 528
NdeII GATC 4 cut(s) 50, 451, 523, 720
NlaIII CATG 3 cut(s) 323, 653, 720
NlaIV GGNNCC 2 cut(s) 74, 638
NmeAIII GCCGAG 1 cut(s) 194
NmuCI GTSAC 1 cut(s) 543
PdmI GAANNNNTTC 3 cut(s) 126, 357, 641
PfeI GAWTC 3 cut(s) 122, 492, 532
PflMI CCANNNNNTGG 1 cut(s) 600
PkrI GCNGC 5 cut(s) 103, 145, 231, 286, 658
PleI GAGTC 1 cut(s) 271
PpsI GAGTC 1 cut(s) 271
Ppu21I YACGTR 1 cut(s) 473
Psp6I CCWGG 3 cut(s) 89, 244, 400
PspEI GGTNACC 1 cut(s) 85
PspGI CCWGG 3 cut(s) 89, 244, 400
PspN4I GGNNCC 2 cut(s) 74, 638
PspPI GGNCC 3 cut(s) 40, 73, 160
PsuI RGATCY 2 cut(s) 523, 720
RsaI GTAC 1 cut(s) 391
RsaNI GTAC 1 cut(s) 390
SaqAI TTAA 1 cut(s) 605
SatI GCNGC 5 cut(s) 102, 144, 230, 285, 657
Sau3AI GATC 4 cut(s) 50, 451, 523, 720
Sau96I GGNCC 3 cut(s) 40, 73, 160
SchI GAGTC 1 cut(s) 271
ScrFI CCNGG 5 cut(s) 91, 246, 363, 402, 528
SinI GGWCC 2 cut(s) 73, 160
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
SnaBI TACGTA 1 cut(s) 473
Sse9I AATT 4 cut(s) 12, 368, 584, 608
SsiI CCGC 3 cut(s) 144, 229, 242
SspI AATATT 1 cut(s) 23
StyD4I CCNGG 5 cut(s) 89, 244, 361, 400, 526
StyI CCWWGG 1 cut(s) 76
TaaI ACNGT 2 cut(s) 207, 707
TaiI ACGT 1 cut(s) 475
TaqI TCGA 2 cut(s) 339, 505
TasI AATT 4 cut(s) 12, 368, 584, 608
TauI GCSGC 2 cut(s) 146, 232
TfiI GAWTC 3 cut(s) 122, 492, 532
Tru1I TTAA 1 cut(s) 605
Tru9I TTAA 1 cut(s) 605
TscAI CASTG 2 cut(s) 42, 429
TseFI GTSAC 1 cut(s) 543
TseI GCWGC 3 cut(s) 101, 284, 656
Tsp45I GTSAC 1 cut(s) 543
TspDTI ATGAA 2 cut(s) 243, 444
TspGWI ACGGA 2 cut(s) 194, 632
TspRI CASTG 2 cut(s) 42, 429
Van91I CCANNNNNTGG 1 cut(s) 600
VpaK11BI GGWCC 2 cut(s) 73, 160
XapI RAATTY 2 cut(s) 584, 608
XmiI GTMKAC 1 cut(s) 731
XmnI GAANNNNTTC 3 cut(s) 126, 357, 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.