Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004284

Physical Location & Seq

Genomic Coordinates Reverse (-)

9433616 .. 9436658

Gene Structure 3043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G22190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1065 bp

ATGGTTAGATTCATCGAAGAAAATATTACTAAAATGTTGGAGACAAAGGCCATCTCAAACTCGGAGGTTTTATATGTCGGAGGAGACGACGGAGACACGTCACCAACGACGAAAGTTCTTCATGATTTTCAGATCAACAGCGGAGGAGGACTGATAAGATCATGGGTTGATTCTATGAGAGCTTGTTCTCCTACTCGCCCTAAATCCTTCAATAGCCAATCTTGTTGGATTAAGGAACATCCATCTGCTTTGAACATGTTCGAAGAAATACTTCATAAATCTGAAGGAAAACAAATAGTTATGTTTCTTGATTATGATGGTACTCTCTCTCCCATTGTTGATGATCCTGATCGAGCTTTCATGTCCAAGAAGATGCGAAATACTGTGAGGAAACTTGCAAAGTGTTTTCCAACAGCCATAGTTAGTGGGAGATGCAGAGAGAAGGTTTCTAGTTTTGTGAAATTAACTGAGTTATACTACGCTGGAAGTCATGGCATGGACATCAAAGGACCAGAGCAAGGATCTAAATACAAGAAAGAAAATCAGTCTCTTCTTTGTCAACCCGCAACTGAATTCCTCCCGGTGATAAACGAGGTTTATAAAAAACTAGTCGAGAACACTCAATCGATTCCAGGAGCGAAAGTTGAGAACAACAAATTTTGTGCGTCTGTTCACTTTCGATGCGTAGAAGAAAATAAATGGAGTGACTTGGCCCATCAAGTTCGATCAGTCTTGAAGAATTACCCCAAGCTCATGCTTACCCAAGGAAGAAAAGTATTGGAGATTCGTCCAATCATTAAGTGGGATAAAGGCAAAGCACTCGAGTTTTTGTTAGAATCACTAGGATATGATAATTGTACCGATGTTTTTCCTATATATATTGGAGATGATCGTACCGACGAAGACGCCTTTAAGATACTGAGAGACAAAAAACAAGGTCTTGGAATTCTTGTGTCCAAATACGCAAAGGAGACTAATGCTTCTTATTCTTTGCAAGAGCCAGATGAGGTTATGGTTTTTTTAGAACGTTTGGTGGAATGGAAACAGTCAAGGTGTGGGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004805 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0022603 GO:0030312 GO:0031974 GO:0031981 GO:0034637 GO:0042221 GO:0042578 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046351 GO:0046686 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0060688 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:1900618 GO:1901576 GO:1905428 GO:2000026 GO:2000032

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Trehalose_PPase

Protein Analysis

354

Amino Acids

40.25

Weight (kDa)

8.24

Isoelectric Point (pI)

44.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trehalose_PPase	PF02358	102 - 334	4.1e-74	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004284)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22210 AT1G78090 AT1G78090 AT2G22190 AT2G22190 AT4G39770 AT4G39770 AT5G10100 AT5G10100 AT5G10100 AT5G10100 AT5G65140 AT5G65140 AT5G65140
fragaria_vesca	FvH4_1g21200 FvH4_1g21200 FvH4_1g21200 FvH4_1g21200
malus_domestica	MD15G1326700.v1.1
prunus_persica	Prupe.6G182400_v2.0.a1
pyrus_communis	pycom01g05510 pycom15g28800
rosa_chinensis	RchiOBHm_Chr2g0115021
rosa_laevigata	RLG00000018138
rosa_multiflora	Rmu_sc0000784.1_g000004
rosa_roxburghii	Rroxscaffold_2G00130490
rosa_rugosa	Rorug02G0192300
rosa_samantha	Rh2AG250900 Rh2BG260300 Rh2CG255200 Rh2DG259000
rosa_wichuraiana	Rw2G019590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	600
AciI	CCGC	2 cut(s)	141, 564
AclI	AACGTT	1 cut(s)	1027
AclWI	GGATC	2 cut(s)	338, 529
AcsI	RAATTY	3 cut(s)	572, 656, 945
AcuI	CTGAAG	1 cut(s)	303
AcyI	GRCGYC	1 cut(s)	906
AfaI	GTAC	3 cut(s)	322, 859, 895
AfiI	CCNNNNNNNGG	1 cut(s)	518
AflIII	ACRYGT	2 cut(s)	96, 255
AgsI	TTSAA	3 cut(s)	211, 253, 736
AhlI	ACTAGT	1 cut(s)	607
AjiI	CACGTC	1 cut(s)	99
AjnI	CCWGG	1 cut(s)	631
AluBI	AGCT	3 cut(s)	182, 356, 751
AluI	AGCT	3 cut(s)	182, 356, 751
Alw26I	GTCTC	6 cut(s)	35, 78, 87, 552, 918, 965
AlwI	GGATC	2 cut(s)	338, 529
Ama87I	CYCGRG	1 cut(s)	821
AoxI	GGCC	2 cut(s)	48, 711
ApoI	RAATTY	3 cut(s)	572, 656, 945
Asp700I	GAANNNNTTC	2 cut(s)	257, 270
AspS9I	GGNCC	2 cut(s)	509, 712
AsuC2I	CCSGG	1 cut(s)	581
AsuHPI	GGTGA	2 cut(s)	93, 595
AsuII	TTCGAA	1 cut(s)	261
AvaI	CYCGRG	1 cut(s)	821
AvaII	GGWCC	1 cut(s)	509
BbsI	GAAGAC	1 cut(s)	909
BccI	CCATC	4 cut(s)	59, 250, 311, 723
BcgI	CGANNNNNNTGC	2 cut(s)	802, 836
BciT130I	CCWGG	1 cut(s)	633
BcnI	CCSGG	1 cut(s)	581
BcoDI	GTCTC	6 cut(s)	35, 78, 87, 552, 918, 965
BcuI	ACTAGT	1 cut(s)	607
BfaI	CTAG	3 cut(s)	450, 608, 842
Bme1390I	CCNGG	2 cut(s)	581, 633
Bme18I	GGWCC	1 cut(s)	509
BmeT110I	CYCGRG	1 cut(s)	821
BmgBI	CACGTC	1 cut(s)	99
BmgT120I	GGNCC	2 cut(s)	509, 712
BmrFI	CCNGG	2 cut(s)	581, 633
BmsI	GCATC	3 cut(s)	363, 422, 671
BpiI	GAAGAC	1 cut(s)	909
Bpu14I	TTCGAA	1 cut(s)	261
BpuMI	CCSGG	1 cut(s)	581
Bsa29I	ATCGAT	1 cut(s)	626
BsaBI	GATNNNNATC	1 cut(s)	348
BsaHI	GRCGYC	1 cut(s)	906
BsaJI	CCNNGG	1 cut(s)	763
BsaXI	ACNNNNNCTCC	4 cut(s)	313, 343, 627, 657
Bsc4I	CCNNNNNNNGG	1 cut(s)	518
Bse8I	GATNNNNATC	1 cut(s)	348
BseBI	CCWGG	1 cut(s)	633
BseCI	ATCGAT	1 cut(s)	626
BseDI	CCNNGG	1 cut(s)	763
BseGI	GGATG	1 cut(s)	238
BseJI	GATNNNNATC	1 cut(s)	348
BseLI	CCNNNNNNNGG	1 cut(s)	518
BseMII	CTCAG	2 cut(s)	459, 911
BseRI	GAGGAG	2 cut(s)	96, 159
BshFI	GGCC	2 cut(s)	50, 713
BshVI	ATCGAT	1 cut(s)	626
BsiHKCI	CYCGRG	1 cut(s)	821
BsiSI	CCGG	1 cut(s)	581
BslI	CCNNNNNNNGG	1 cut(s)	518
BsmAI	GTCTC	6 cut(s)	35, 78, 87, 552, 918, 965
BsmBI	CGTCTC	1 cut(s)	78
BsnI	GGCC	2 cut(s)	50, 713
BsoBI	CYCGRG	1 cut(s)	821
Bsp119I	TTCGAA	1 cut(s)	261
Bsp143I	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
BspACI	CCGC	2 cut(s)	141, 564
BspANI	GGCC	2 cut(s)	50, 713
BspCNI	CTCAG	2 cut(s)	460, 912
BspDI	ATCGAT	1 cut(s)	626
BspHI	TCATGA	1 cut(s)	121
BspPI	GGATC	2 cut(s)	338, 529
BspT104I	TTCGAA	1 cut(s)	261
BssECI	CCNNGG	1 cut(s)	763
BssMI	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
BssNI	GRCGYC	1 cut(s)	906
BssT1I	CCWWGG	1 cut(s)	763
Bst2UI	CCWGG	1 cut(s)	633
Bst4CI	ACNGT	2 cut(s)	385, 1047
Bst6I	CTCTTC	1 cut(s)	555
BstACI	GRCGYC	1 cut(s)	906
BstBI	TTCGAA	1 cut(s)	261
BstDEI	CTNAG	2 cut(s)	468, 920
BstF5I	GGATG	1 cut(s)	238
BstKTI	GATC	7 cut(s)	135, 161, 346, 352, 524, 728, 892
BstMAI	GTCTC	6 cut(s)	35, 78, 87, 552, 918, 965
BstMBI	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
BstNI	CCWGG	1 cut(s)	633
BstNSI	RCATGY	1 cut(s)	259
BstSCI	CCNGG	2 cut(s)	579, 631
BstV2I	GAAGAC	1 cut(s)	909
BstX2I	RGATCY	1 cut(s)	521
BstYI	RGATCY	1 cut(s)	521
Bsu15I	ATCGAT	1 cut(s)	626
BsuRI	GGCC	2 cut(s)	50, 713
BsuTUI	ATCGAT	1 cut(s)	626
BtrI	CACGTC	1 cut(s)	99
BtsCI	GGATG	1 cut(s)	238
CciI	TCATGA	1 cut(s)	121
Cfr13I	GGNCC	2 cut(s)	509, 712
ClaI	ATCGAT	1 cut(s)	626
CseI	GACGC	2 cut(s)	654, 914
Csp6I	GTAC	3 cut(s)	321, 858, 894
CviAII	CATG	8 cut(s)	122, 162, 256, 361, 491, 496, 754, 1062
CviJI	RGCY	8 cut(s)	50, 182, 216, 356, 416, 713, 751, 1000
CviKI_1	RGCY	8 cut(s)	50, 182, 216, 356, 416, 713, 751, 1000
CviQI	GTAC	3 cut(s)	321, 858, 894
DdeI	CTNAG	2 cut(s)	468, 920
DpnI	GATC	7 cut(s)	134, 160, 345, 351, 523, 727, 891
DpnII	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
Eam1104I	CTCTTC	1 cut(s)	555
EarI	CTCTTC	1 cut(s)	555
Eco130I	CCWWGG	1 cut(s)	763
Eco47I	GGWCC	1 cut(s)	509
Eco57I	CTGAAG	1 cut(s)	303
Eco88I	CYCGRG	1 cut(s)	821
EcoRI	GAATTC	2 cut(s)	572, 945
EcoRII	CCWGG	1 cut(s)	631
EcoT14I	CCWWGG	1 cut(s)	763
ErhI	CCWWGG	1 cut(s)	763
Esp3I	CGTCTC	1 cut(s)	78
FaeI	CATG	8 cut(s)	125, 165, 259, 364, 494, 499, 757, 1065
FalI	AAGNNNNNCTT	2 cut(s)	255, 287
FatI	CATG	8 cut(s)	121, 161, 255, 360, 490, 495, 753, 1061
FauI	CCCGC	1 cut(s)	571
FokI	GGATG	1 cut(s)	225
FspBI	CTAG	3 cut(s)	450, 608, 842
HaeIII	GGCC	2 cut(s)	50, 713
HapII	CCGG	1 cut(s)	581
HgaI	GACGC	2 cut(s)	654, 914
Hin1I	GRCGYC	1 cut(s)	906
Hin1II	CATG	8 cut(s)	125, 165, 259, 364, 494, 499, 757, 1065
HincII	GTYRAC	1 cut(s)	560
HindII	GTYRAC	1 cut(s)	560
HinfI	GANTC	5 cut(s)	9, 170, 628, 784, 836
HpaII	CCGG	1 cut(s)	581
HphI	GGTGA	2 cut(s)	93, 595
Hpy166II	GTNNAC	2 cut(s)	560, 673
Hpy188I	TCNGA	4 cut(s)	64, 80, 132, 283
Hpy188III	TCNNGA	5 cut(s)	122, 308, 347, 613, 733
Hpy8I	GTNNAC	2 cut(s)	560, 673
Hpy99I	CGWCG	3 cut(s)	92, 112, 902
HpyAV	CCTTC	3 cut(s)	217, 278, 436
HpyCH4III	ACNGT	2 cut(s)	385, 1047
HpyCH4IV	ACGT	2 cut(s)	98, 1027
HpyCH4V	TGCA	3 cut(s)	398, 435, 994
HpyF3I	CTNAG	2 cut(s)	468, 920
HpySE526I	ACGT	2 cut(s)	98, 1027
Hsp92I	GRCGYC	1 cut(s)	906
Hsp92II	CATG	8 cut(s)	125, 165, 259, 364, 494, 499, 757, 1065
Kzo9I	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
LmnI	GCTCC	1 cut(s)	635
LpnPI	CCDG	7 cut(s)	360, 468, 525, 594, 618, 645, 1014
LweI	GCATC	3 cut(s)	363, 422, 671
MaeI	CTAG	3 cut(s)	450, 608, 842
MaeII	ACGT	2 cut(s)	98, 1027
MaeIII	GTNAC	2 cut(s)	99, 704
MalI	GATC	7 cut(s)	134, 160, 345, 351, 523, 727, 891
MboI	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
MboII	GAAGA	9 cut(s)	29, 110, 275, 382, 542, 701, 748, 780, 914
MflI	RGATCY	1 cut(s)	521
MluCI	AATT	6 cut(s)	461, 572, 656, 739, 853, 945
MmeI	TCCRAC	4 cut(s)	18, 58, 206, 434
MnlI	CCTC	8 cut(s)	58, 74, 137, 140, 381, 586, 587, 1000
MroXI	GAANNNNTTC	2 cut(s)	257, 270
MseI	TTAA	4 cut(s)	231, 464, 798, 912
MspA1I	CMGCKG	1 cut(s)	141
MspI	CCGG	1 cut(s)	581
MspR9I	CCNGG	2 cut(s)	581, 633
MvaI	CCWGG	1 cut(s)	633
NciI	CCSGG	1 cut(s)	581
NdeII	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
NlaIII	CATG	8 cut(s)	125, 165, 259, 364, 494, 499, 757, 1065
NmuCI	GTSAC	2 cut(s)	99, 704
NspI	RCATGY	1 cut(s)	259
NspV	TTCGAA	1 cut(s)	261
PaeR7I	CTCGAG	1 cut(s)	821
PagI	TCATGA	1 cut(s)	121
PciI	ACATGT	1 cut(s)	255
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 104
PdmI	GAANNNNTTC	2 cut(s)	257, 270
PfeI	GAWTC	5 cut(s)	9, 170, 628, 784, 836
PfoI	TCCNGGA	1 cut(s)	631
PscI	ACATGT	1 cut(s)	255
PsiI	TTATAA	1 cut(s)	600
Psp1406I	AACGTT	1 cut(s)	1027
Psp6I	CCWGG	1 cut(s)	631
PspGI	CCWGG	1 cut(s)	631
PspPI	GGNCC	2 cut(s)	509, 712
PspXI	VCTCGAGB	1 cut(s)	821
PsuI	RGATCY	1 cut(s)	521
RsaI	GTAC	3 cut(s)	322, 859, 895
RsaNI	GTAC	3 cut(s)	321, 858, 894
SaqAI	TTAA	4 cut(s)	231, 464, 798, 912
Sau3AI	GATC	7 cut(s)	132, 158, 343, 349, 521, 725, 889
Sau96I	GGNCC	2 cut(s)	509, 712
ScrFI	CCNGG	2 cut(s)	581, 633
SfaNI	GCATC	3 cut(s)	363, 422, 671
Sfr274I	CTCGAG	1 cut(s)	821
SfuI	TTCGAA	1 cut(s)	261
SinI	GGWCC	1 cut(s)	509
SlaI	CTCGAG	1 cut(s)	821
SmlI	CTYRAG	1 cut(s)	821
SmoI	CTYRAG	1 cut(s)	821
SpeI	ACTAGT	1 cut(s)	607
Sse9I	AATT	6 cut(s)	461, 572, 656, 739, 853, 945
SsiI	CCGC	2 cut(s)	141, 564
SspI	AATATT	1 cut(s)	25
SspMI	CTAG	3 cut(s)	450, 608, 842
StyD4I	CCNGG	2 cut(s)	579, 631
StyI	CCWWGG	1 cut(s)	763
TaaI	ACNGT	2 cut(s)	385, 1047
TaiI	ACGT	2 cut(s)	101, 1030
TaqI	TCGA	8 cut(s)	15, 261, 352, 612, 626, 679, 724, 822
TasI	AATT	6 cut(s)	461, 572, 656, 739, 853, 945
TfiI	GAWTC	5 cut(s)	9, 170, 628, 784, 836
Tru1I	TTAA	4 cut(s)	231, 464, 798, 912
Tru9I	TTAA	4 cut(s)	231, 464, 798, 912
TseFI	GTSAC	2 cut(s)	99, 704
Tsp45I	GTSAC	2 cut(s)	99, 704
TspDTI	ATGAA	3 cut(s)	110, 263, 349
TspGWI	ACGGA	1 cut(s)	105
VpaK11BI	GGWCC	1 cut(s)	509
XapI	RAATTY	3 cut(s)	572, 656, 945
XceI	RCATGY	1 cut(s)	259
XcmI	CCANNNNNNNNNTGG	1 cut(s)	798
XhoI	CTCGAG	1 cut(s)	821
XmnI	GAANNNNTTC	2 cut(s)	257, 270
XspI	CTAG	3 cut(s)	450, 608, 842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.