AT2G26100

Belongs to the glycosyltransferase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0011407
Physical Location & Seq
Reverse (-)
11115873 .. 11118362
2490 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G26100.2

Sequence Viewer

Length: 1116 bp
ATGCCACTATTCTCCCACCGCTTCACCACCGCATCTTCTTCTTCCCCGGCGTCTCCTTCTTACTACAATAAACCCTCTTCGAAAACCCATAAACCAAACTCTTCTTCTTCTTCTTATACTTCGTCTCGTATTCATGTAGCTATCATATTCTTCTCCCTTGTCTCTGTTTTCATCGGAGTCGCCGGAACTATCTTCGCACTCTCCTCCACCGGTCCTGCTTCTGTTTATCGATGCGGCGGATCTAAAGACACTTCTCGGGTTGTGTCTGCTTCAAGAAAGCTCGGAGGAGATGGTGGTAATAATGGTGTTGTTGTTGAAAGACGAAAGCTTTTAGGGTTTGTTGGGATCCAGACTGGTTTTGATTCCGGTGATCGTAGAACTGCTTTGAGAAGTACTTGGTTCCCTTCTGATCCTGATTCTCTTCTAAGGTTGGAACAAGCGACTGGATTAGCTTTTAGATTCGTCATTGGAAAGTCAAAGGATGCCAAAAAGATGGCTGAGCTTGAGAAGGAGATAAAAGAGTACAGAGATTTTGTGCTTCTTGATACCGAGGAAGAATATATACGACTTCCATATAAAACGTTGGCTTTCTTCAAAGCAGCTTTTAAACTCTTTGAAGCTGATTATTATGTCAAAGCCGACGATGACATTTATTTGAGACCAGATCGACTTGCGACGCTTCTTGCCAATGAAAGACTTCATTCACAGACATACATTGGCTGCATGAAGAAAGGACCAGTTATAACTGACCCTAAACTAAAATGGTACGAGAAACAAGGCAATTTGATTGGAAATGAATACTTTTTACATGCTTATGGACCGATATACGTTCTTTCAGCCGAGATAGTAGCTTCACTTGCAGCAGCTAGGAATGGCAGTCTGAGAATGTTTAATAATGAAGATGTAACTATCGGATCTTGGATGCTTGCAATGGATGTACATCACGAAGACAACCGCGCTTTATGCGATCCGCATTGTTCCCCAAAGTCCATAGCAGTTTGGGACATTCCCAAATGCTCAGGGCTTTGTGACCCGGAGAGTCGGTTAAAAGAGCTTCATAAGACGGATATGTGCTCCAAGAGTCCGACATTACCTCCCGATGACATCGATCAGTAG

Protein Analysis

371

Amino Acids

41.22

Weight (kDa)

8.52

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Galactosyl_T PF01762 124 - 318 1.4e-56 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011407)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26100 AT2G26100
fragaria_vesca FvH4_2g31860 FvH4_2g31860
malus_domestica MD08G1061800.v1.1 MD15G1059900.v1.1
prunus_persica Prupe.1G411800_v2.0.a1
pyrus_communis pycom08g05130 pycom15g05620
rosa_chinensis RchiOBHm_Chr6g0310931
rosa_laevigata RLG00000010449
rosa_multiflora Rmu_sc0012033.1_g000001
rosa_roxburghii Rroxscaffold_7G00158160
rosa_rugosa Rorug06G0384100 Rorug06G0384200
rosa_samantha Rh6AG498000 Rh6BG508400 Rh6CG514300 Rh6DG500800
rosa_wichuraiana Rw6G043370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 743
AccII CGCG 1 cut(s) 957
AciI CCGC 6 cut(s) 19, 30, 234, 237, 955, 971
AclI AACGTT 1 cut(s) 581
AclWI GGATC 6 cut(s) 247, 340, 353, 404, 922, 962
AcyI GRCGYC 1 cut(s) 50
AfaI GTAC 4 cut(s) 394, 524, 767, 939
AgeI ACCGGT 1 cut(s) 209
AgsI TTSAA 4 cut(s) 273, 317, 595, 617
AjuI GAANNNNNNNTTGG 2 cut(s) 88, 120
Alw21I GWGCWC 1 cut(s) 1076
Alw26I GTCTC 4 cut(s) 57, 129, 166, 652
AlwI GGATC 6 cut(s) 247, 340, 353, 404, 922, 962
Ama87I CYCGRG 1 cut(s) 255
ApeKI GCWGC 4 cut(s) 599, 720, 860, 863
AsiGI ACCGGT 1 cut(s) 209
Asp700I GAANNNNTTC 1 cut(s) 696
AspLEI GCGC 1 cut(s) 959
AspS9I GGNCC 3 cut(s) 212, 734, 818
AsuC2I CCSGG 2 cut(s) 47, 1034
AsuHPI GGTGA 2 cut(s) 16, 380
AsuII TTCGAA 1 cut(s) 80
AvaI CYCGRG 1 cut(s) 255
AvaII GGWCC 3 cut(s) 212, 734, 818
BamHI GGATCC 1 cut(s) 345
BarI GAAGNNNNNNTAC 2 cut(s) 546, 578
BbsI GAAGAC 1 cut(s) 954
Bbv12I GWGCWC 1 cut(s) 1076
BbvI GCAGC 4 cut(s) 611, 707, 872, 875
BccI CCATC 2 cut(s) 284, 487
BcnI CCSGG 2 cut(s) 47, 1034
BcoDI GTCTC 4 cut(s) 57, 129, 166, 652
BfaI CTAG 1 cut(s) 867
BisI GCNGC 5 cut(s) 235, 600, 721, 861, 864
BlpI GCTNAGC 1 cut(s) 498
BlsI GCNGC 5 cut(s) 236, 601, 722, 862, 865
BmcAI AGTACT 1 cut(s) 394
Bme1390I CCNGG 2 cut(s) 47, 1034
Bme18I GGWCC 3 cut(s) 212, 734, 818
BmeT110I CYCGRG 1 cut(s) 255
BmgT120I GGNCC 3 cut(s) 212, 734, 818
BmiI GGNNCC 2 cut(s) 347, 401
BmrFI CCNGG 2 cut(s) 47, 1034
BmsI GCATC 4 cut(s) 41, 221, 472, 912
BpiI GAAGAC 1 cut(s) 954
Bpu10I CCTNAGC 1 cut(s) 1018
Bpu1102I GCTNAGC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 80
BpuEI CTTGAG 1 cut(s) 524
BpuMI CCSGG 2 cut(s) 47, 1034
Bsa29I ATCGAT 2 cut(s) 229, 1107
BsaBI GATNNNNATC 1 cut(s) 939
BsaHI GRCGYC 1 cut(s) 50
BsaI GGTCTC 1 cut(s) 652
BsaJI CCNNGG 2 cut(s) 45, 549
BsaWI WCCGGW 2 cut(s) 209, 365
BsaXI ACNNNNNCTCC 4 cut(s) 1028, 1058, 1078, 1108
Bse118I RCCGGY 1 cut(s) 209
Bse1I ACTGG 3 cut(s) 358, 448, 737
Bse3DI GCAATG 1 cut(s) 936
Bse8I GATNNNNATC 1 cut(s) 939
BseCI ATCGAT 2 cut(s) 229, 1107
BseDI CCNNGG 2 cut(s) 45, 549
BseGI GGATG 3 cut(s) 487, 927, 940
BseJI GATNNNNATC 1 cut(s) 939
BseMI GCAATG 1 cut(s) 936
BseMII CTCAG 3 cut(s) 489, 872, 1032
BseNI ACTGG 3 cut(s) 358, 448, 737
BseRI GAGGAG 2 cut(s) 193, 300
BseXI GCAGC 4 cut(s) 611, 707, 872, 875
Bsh1236I CGCG 1 cut(s) 957
BshTI ACCGGT 1 cut(s) 209
BshVI ATCGAT 2 cut(s) 229, 1107
BsiHKAI GWGCWC 1 cut(s) 1076
BsiHKCI CYCGRG 1 cut(s) 255
BsiSI CCGG 5 cut(s) 47, 183, 210, 366, 1034
BslFI GGGAC 1 cut(s) 1016
BsmAI GTCTC 4 cut(s) 57, 129, 166, 652
BsmBI CGTCTC 2 cut(s) 57, 129
BsmFI GGGAC 1 cut(s) 1016
Bso31I GGTCTC 1 cut(s) 652
BsoBI CYCGRG 1 cut(s) 255
Bsp119I TTCGAA 1 cut(s) 80
Bsp1286I GDGCHC 1 cut(s) 1076
Bsp1407I TGTACA 1 cut(s) 937
Bsp143I GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
Bsp1720I GCTNAGC 1 cut(s) 498
BspACI CCGC 6 cut(s) 19, 30, 234, 237, 955, 971
BspCNI CTCAG 3 cut(s) 490, 873, 1031
BspDI ATCGAT 2 cut(s) 229, 1107
BspFNI CGCG 1 cut(s) 957
BspLI GGNNCC 2 cut(s) 347, 401
BspPI GGATC 6 cut(s) 247, 340, 353, 404, 922, 962
BspT104I TTCGAA 1 cut(s) 80
BspTNI GGTCTC 1 cut(s) 652
BsrDI GCAATG 1 cut(s) 936
BsrFI RCCGGY 1 cut(s) 209
BsrGI TGTACA 1 cut(s) 937
BsrI ACTGG 3 cut(s) 358, 448, 737
BssAI RCCGGY 1 cut(s) 209
BssECI CCNNGG 2 cut(s) 45, 549
BssMI GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
BssNI GRCGYC 1 cut(s) 50
Bst6I CTCTTC 3 cut(s) 82, 106, 426
BstACI GRCGYC 1 cut(s) 50
BstAUI TGTACA 1 cut(s) 937
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 1 cut(s) 927
BstDEI CTNAG 4 cut(s) 425, 498, 881, 1018
BstF5I GGATG 3 cut(s) 487, 927, 940
BstFNI CGCG 1 cut(s) 957
BstHHI GCGC 1 cut(s) 959
BstKTI GATC 8 cut(s) 242, 348, 373, 412, 667, 917, 970, 1111
BstMAI GTCTC 4 cut(s) 57, 129, 166, 652
BstMBI GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
BstMWI GCNNNNNNNGC 2 cut(s) 857, 963
BstNSI RCATGY 1 cut(s) 812
BstSCI CCNGG 2 cut(s) 45, 1032
BstUI CGCG 1 cut(s) 957
BstV1I GCAGC 4 cut(s) 611, 707, 872, 875
BstV2I GAAGAC 1 cut(s) 954
BstX2I RGATCY 3 cut(s) 239, 345, 914
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 3 cut(s) 239, 345, 914
Bsu15I ATCGAT 2 cut(s) 229, 1107
BsuTUI ATCGAT 2 cut(s) 229, 1107
BtsCI GGATG 3 cut(s) 487, 927, 940
Cac8I GCNNGC 1 cut(s) 927
CfoI GCGC 1 cut(s) 959
Cfr10I RCCGGY 1 cut(s) 209
Cfr13I GGNCC 3 cut(s) 212, 734, 818
ClaI ATCGAT 2 cut(s) 229, 1107
CseI GACGC 2 cut(s) 39, 685
Csp6I GTAC 4 cut(s) 393, 523, 766, 938
CspAI ACCGGT 1 cut(s) 209
CviAII CATG 3 cut(s) 134, 724, 809
CviQI GTAC 4 cut(s) 393, 523, 766, 938
DdeI CTNAG 4 cut(s) 425, 498, 881, 1018
DpnI GATC 8 cut(s) 241, 347, 372, 411, 666, 916, 969, 1110
DpnII GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
DraI TTTAAA 1 cut(s) 607
Eam1104I CTCTTC 3 cut(s) 82, 106, 426
EarI CTCTTC 3 cut(s) 82, 106, 426
EciI GGCGGA 1 cut(s) 252
Eco31I GGTCTC 1 cut(s) 652
Eco47I GGWCC 3 cut(s) 212, 734, 818
Eco88I CYCGRG 1 cut(s) 255
Esp3I CGTCTC 2 cut(s) 57, 129
FaeI CATG 3 cut(s) 137, 727, 812
FaqI GGGAC 1 cut(s) 1016
FatI CATG 3 cut(s) 133, 723, 808
Fnu4HI GCNGC 5 cut(s) 235, 600, 721, 861, 864
FokI GGATG 3 cut(s) 494, 934, 947
Fsp4HI GCNGC 5 cut(s) 235, 600, 721, 861, 864
FspBI CTAG 1 cut(s) 867
GlaI GCGC 1 cut(s) 958
GluI GCNGC 5 cut(s) 235, 600, 721, 861, 864
HapII CCGG 5 cut(s) 47, 183, 210, 366, 1034
HgaI GACGC 2 cut(s) 39, 685
HhaI GCGC 1 cut(s) 959
Hin1I GRCGYC 1 cut(s) 50
Hin1II CATG 3 cut(s) 137, 727, 812
Hin6I GCGC 1 cut(s) 957
HinP1I GCGC 1 cut(s) 957
HindIII AAGCTT 1 cut(s) 326
HinfI GANTC 6 cut(s) 177, 362, 416, 459, 1039, 1081
HpaII CCGG 5 cut(s) 47, 183, 210, 366, 1034
HphI GGTGA 2 cut(s) 16, 380
Hpy188I TCNGA 6 cut(s) 176, 284, 409, 882, 914, 1086
Hpy188III TCNNGA 6 cut(s) 273, 349, 413, 542, 944, 1097
Hpy99I CGWCG 2 cut(s) 644, 679
HpyAV CCTTC 3 cut(s) 66, 414, 502
HpyCH4IV ACGT 2 cut(s) 581, 828
HpyCH4V TGCA 3 cut(s) 723, 860, 929
HpyF10VI GCNNNNNNNGC 2 cut(s) 857, 963
HpyF3I CTNAG 4 cut(s) 425, 498, 881, 1018
HpySE526I ACGT 2 cut(s) 581, 828
Hsp92I GRCGYC 1 cut(s) 50
Hsp92II CATG 3 cut(s) 137, 727, 812
HspAI GCGC 1 cut(s) 957
Kzo9I GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
LmnI GCTCC 1 cut(s) 1079
Lsp1109I GCAGC 4 cut(s) 611, 707, 872, 875
LweI GCATC 4 cut(s) 41, 221, 472, 912
MaeI CTAG 1 cut(s) 867
MaeII ACGT 2 cut(s) 581, 828
MaeIII GTNAC 2 cut(s) 904, 1028
MalI GATC 8 cut(s) 241, 347, 372, 411, 666, 916, 969, 1110
MboI GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
MflI RGATCY 3 cut(s) 239, 345, 914
MhlI GDGCHC 1 cut(s) 1076
MluCI AATT 1 cut(s) 781
MlyI GAGTC 3 cut(s) 186, 1048, 1090
MmeI TCCRAC 2 cut(s) 411, 1109
MnlI CCTC 5 cut(s) 85, 214, 278, 544, 1104
MroXI GAANNNNTTC 1 cut(s) 696
MseI TTAA 3 cut(s) 606, 891, 1046
MslI CAYNNNNRTG 1 cut(s) 813
MspI CCGG 5 cut(s) 47, 183, 210, 366, 1034
MspR9I CCNGG 2 cut(s) 47, 1034
MvnI CGCG 1 cut(s) 957
MwoI GCNNNNNNNGC 2 cut(s) 857, 963
NciI CCSGG 2 cut(s) 47, 1034
NdeII GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
NlaIII CATG 3 cut(s) 137, 727, 812
NlaIV GGNNCC 2 cut(s) 347, 401
NmeAIII GCCGAG 1 cut(s) 865
NmuCI GTSAC 1 cut(s) 1028
NspI RCATGY 1 cut(s) 812
NspV TTCGAA 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 696
PfeI GAWTC 3 cut(s) 362, 416, 459
PinAI ACCGGT 1 cut(s) 209
PkrI GCNGC 5 cut(s) 236, 601, 722, 862, 865
PleI GAGTC 3 cut(s) 185, 1047, 1089
PpsI GAGTC 3 cut(s) 185, 1047, 1089
PsiI TTATAA 1 cut(s) 743
Psp1406I AACGTT 1 cut(s) 581
PspN4I GGNNCC 2 cut(s) 347, 401
PspPI GGNCC 3 cut(s) 212, 734, 818
PsuI RGATCY 3 cut(s) 239, 345, 914
RsaI GTAC 4 cut(s) 394, 524, 767, 939
RsaNI GTAC 4 cut(s) 393, 523, 766, 938
RseI CAYNNNNRTG 1 cut(s) 813
SaqAI TTAA 3 cut(s) 606, 891, 1046
SatI GCNGC 5 cut(s) 235, 600, 721, 861, 864
Sau3AI GATC 8 cut(s) 239, 345, 370, 409, 664, 914, 967, 1108
Sau96I GGNCC 3 cut(s) 212, 734, 818
ScaI AGTACT 1 cut(s) 394
SchI GAGTC 3 cut(s) 186, 1048, 1090
ScrFI CCNGG 2 cut(s) 47, 1034
SduI GDGCHC 1 cut(s) 1076
SfaNI GCATC 4 cut(s) 41, 221, 472, 912
SfuI TTCGAA 1 cut(s) 80
SinI GGWCC 3 cut(s) 212, 734, 818
SmiMI CAYNNNNRTG 1 cut(s) 813
SmlI CTYRAG 1 cut(s) 503
SmoI CTYRAG 1 cut(s) 503
Sse9I AATT 1 cut(s) 781
SsiI CCGC 6 cut(s) 19, 30, 234, 237, 955, 971
SspMI CTAG 1 cut(s) 867
StyD4I CCNGG 2 cut(s) 45, 1032
TaiI ACGT 2 cut(s) 584, 831
TaqI TCGA 4 cut(s) 80, 229, 667, 1107
TaqII GACCGA 1 cut(s) 835
TasI AATT 1 cut(s) 781
TatI WGTACW 3 cut(s) 392, 522, 937
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 3 cut(s) 362, 416, 459
Tru1I TTAA 3 cut(s) 606, 891, 1046
Tru9I TTAA 3 cut(s) 606, 891, 1046
TseFI GTSAC 1 cut(s) 1028
TseI GCWGC 4 cut(s) 599, 720, 860, 863
Tsp45I GTSAC 1 cut(s) 1028
TspDTI ATGAA 8 cut(s) 122, 160, 689, 705, 740, 810, 912, 1046
TspGWI ACGGA 1 cut(s) 1079
VpaK11BI GGWCC 3 cut(s) 212, 734, 818
XceI RCATGY 1 cut(s) 812
XmnI GAANNNNTTC 1 cut(s) 696
XspI CTAG 1 cut(s) 867
ZrmI AGTACT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.