Prupe.1G411800_v2.0.a1

Belongs to the glycosyltransferase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0011407
Physical Location & Seq
Forward (+)
35947747 .. 35951027
3281 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G411800.1

Sequence Viewer

Length: 1107 bp
ATGCCACTCTTTTTCCACCGCCAATCTTCTCTCCCAACCACCACCGCCACCTCCCCCTCTTACTCTTCCAAGCTCCTCAAGCCCCTAAAACCCAATTCTGCCCCTGTCCCCACGCGCTCTCCCCTGCCCATTATCGTCTTTTCACTCGTCTCCCTCTTCATCGGCCTCGCCGGAACCATCTTCGCCATCACCGCCCTCCGTCGCCCAACGCCCATTCCCGTTTTTCGATGCGGCAAATCGGAAGACACCTTCCGGGCATTCTACTCTCTTTCGACCTCTCGGCAGCTCGGTGATAAGAATGGTGGCTTGGTTGATCGGCCTAAGCTTCTTGGGTTCGTCGGAATTCAGACCGGGTTCGGCTCAGCTGATCGCCGTGCGGCTTTGCGGAGGACGTGGTTTCCTTCTGACCCAGATGGCCTTTTGAGATTGGAACAAGCTACTGGTTTAGCTTTTAGGTTTGTTATTGGGAGATCTAAAGATGCAAAGAAGATGGCGGGGGTTCAGAAAGAGATAGATAAGTACAGAGACTTTCTGGTTATTGATGTCAATGAAGAGTATTTGAACCTTCCATGGAAAACGTTGGCATTTTTCAAAGCAGCATTTCAACTTTTTGAAGCAGATTACTATGTCAAAGCAGATGACGACATTTATTTGCGTCCAGATCGACTAGCAACACTTCTAGCCAAGGAGCGAACACATTCACAAACCTACATTGGATGCATGAAGAAAGGACCAGTAATCACTGACCCTAAAATGAAATGGTATGAGAAATCAGGACATCTAATTGGGAATGAATACTTTCGGCATGCTTATGGTCCTATATATGTTCTGTCTGCAGAAGTGGTAGCATCATTGGCAATTGCTAGAAATAACAGTTTGAGAATGTTTAGCAATGAGGACGTTACGATTGGGTCGTGGATGCTTGCTATGAATGTCAACCATGAGGATAATCGGGCATTATGTGACCCTCGTTGCACACCTGCATCCATCGCAGTGTGGGACATCCCAAAATGTTCAGGTTTGTGCAACCCAGCTAGTAGGCTGAAAGAGCTTCATGCAATGGGTATGTGCTCCAAAAGTCCAACTCTTCGTCCCGACGACAGATAG

Protein Analysis

369

Amino Acids

41.2

Weight (kDa)

9.51

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011407)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26100 AT2G26100
fragaria_vesca FvH4_2g31860 FvH4_2g31860
malus_domestica MD08G1061800.v1.1 MD15G1059900.v1.1
prunus_persica Prupe.1G411800_v2.0.a1
pyrus_communis pycom08g05130 pycom15g05620
rosa_chinensis RchiOBHm_Chr6g0310931
rosa_laevigata RLG00000010449
rosa_multiflora Rmu_sc0012033.1_g000001
rosa_roxburghii Rroxscaffold_7G00158160
rosa_rugosa Rorug06G0384100 Rorug06G0384200
rosa_samantha Rh6AG498000 Rh6BG508400 Rh6CG514300 Rh6DG500800
rosa_wichuraiana Rw6G043370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 988
Acc36I ACCTGC 1 cut(s) 988
AccII CGCG 1 cut(s) 115
AciI CCGC 7 cut(s) 19, 45, 192, 231, 377, 385, 494
AclI AACGTT 1 cut(s) 578
AcsI RAATTY 1 cut(s) 342
AfaI GTAC 1 cut(s) 521
AgsI TTSAA 4 cut(s) 562, 592, 605, 614
AjiI CACGTC 1 cut(s) 393
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AluBI AGCT 8 cut(s) 73, 286, 325, 365, 437, 449, 1034, 1051
AluI AGCT 8 cut(s) 73, 286, 325, 365, 437, 449, 1034, 1051
Alw21I GWGCWC 1 cut(s) 1073
Alw26I GTCTC 2 cut(s) 154, 519
AoxI GGCC 3 cut(s) 163, 317, 415
ApeKI GCWGC 2 cut(s) 283, 596
ApoI RAATTY 1 cut(s) 342
Asp700I GAANNNNTTC 2 cut(s) 697, 798
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 2 cut(s) 731, 815
AsuC2I CCSGG 2 cut(s) 254, 352
AsuHPI GGTGA 2 cut(s) 181, 302
AvaII GGWCC 2 cut(s) 731, 815
BbsI GAAGAC 1 cut(s) 249
Bbv12I GWGCWC 1 cut(s) 1073
BbvI GCAGC 2 cut(s) 295, 608
BccI CCATC 5 cut(s) 185, 194, 407, 484, 995
BceAI ACGGC 1 cut(s) 357
BcnI CCSGG 2 cut(s) 254, 352
BcoDI GTCTC 2 cut(s) 154, 519
BfaI CTAG 4 cut(s) 668, 680, 864, 1035
BfmI CTRYAG 1 cut(s) 834
BfuAI ACCTGC 1 cut(s) 988
BglII AGATCT 1 cut(s) 470
BisI GCNGC 4 cut(s) 232, 284, 378, 597
BlpI GCTNAGC 1 cut(s) 361
BlsI GCNGC 4 cut(s) 233, 285, 379, 598
Bme1390I CCNGG 2 cut(s) 254, 352
Bme18I GGWCC 2 cut(s) 731, 815
BmgBI CACGTC 1 cut(s) 393
BmgT120I GGNCC 2 cut(s) 731, 815
BmiI GGNNCC 1 cut(s) 175
BmrFI CCNGG 2 cut(s) 254, 352
BmsI GCATC 6 cut(s) 218, 469, 707, 857, 909, 992
BpiI GAAGAC 1 cut(s) 249
Bpu10I CCTNAGC 1 cut(s) 321
Bpu1102I GCTNAGC 1 cut(s) 361
BpuEI CTTGAG 1 cut(s) 62
BpuMI CCSGG 2 cut(s) 254, 352
BsaJI CCNNGG 2 cut(s) 569, 684
BsaXI ACNNNNNCTCC 2 cut(s) 103, 133
Bse1I ACTGG 2 cut(s) 445, 734
Bse3DI GCAATG 2 cut(s) 898, 1065
BseDI CCNNGG 2 cut(s) 569, 684
BseGI GGATG 4 cut(s) 722, 924, 983, 1002
BseMI GCAATG 2 cut(s) 898, 1065
BseMII CTCAG 1 cut(s) 375
BseNI ACTGG 2 cut(s) 445, 734
BseRI GAGGAG 1 cut(s) 65
BseXI GCAGC 2 cut(s) 295, 608
BseYI CCCAGC 1 cut(s) 1030
Bsh1236I CGCG 1 cut(s) 115
BshFI GGCC 3 cut(s) 165, 319, 417
BsiHKAI GWGCWC 1 cut(s) 1073
BsiSI CCGG 3 cut(s) 171, 253, 351
BslFI GGGAC 3 cut(s) 92, 1013, 1077
BsmAI GTCTC 2 cut(s) 154, 519
BsmBI CGTCTC 1 cut(s) 154
BsmFI GGGAC 3 cut(s) 92, 1013, 1077
BsmI GAATGC 1 cut(s) 257
BsnI GGCC 3 cut(s) 165, 319, 417
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp143I GATC 4 cut(s) 313, 367, 470, 661
Bsp1720I GCTNAGC 1 cut(s) 361
Bsp19I CCATGG 1 cut(s) 569
BspACI CCGC 7 cut(s) 19, 45, 192, 231, 377, 385, 494
BspANI GGCC 3 cut(s) 165, 319, 417
BspCNI CTCAG 1 cut(s) 374
BspFNI CGCG 1 cut(s) 115
BspLI GGNNCC 1 cut(s) 175
BspMAI CTGCAG 1 cut(s) 838
BspMI ACCTGC 1 cut(s) 988
BsrDI GCAATG 2 cut(s) 898, 1065
BsrI ACTGG 2 cut(s) 445, 734
BssECI CCNNGG 2 cut(s) 569, 684
BssMI GATC 4 cut(s) 313, 367, 470, 661
BssT1I CCWWGG 2 cut(s) 569, 684
Bst4CI ACNGT 1 cut(s) 875
Bst6I CTCTTC 4 cut(s) 70, 161, 546, 1092
BstC8I GCNNGC 2 cut(s) 807, 924
BstDEI CTNAG 2 cut(s) 321, 361
BstDSI CCRYGG 1 cut(s) 569
BstF5I GGATG 4 cut(s) 722, 924, 983, 1002
BstFNI CGCG 1 cut(s) 115
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 4 cut(s) 316, 370, 473, 664
BstMAI GTCTC 2 cut(s) 154, 519
BstMBI GATC 4 cut(s) 313, 367, 470, 661
BstMWI GCNNNNNNNGC 5 cut(s) 79, 191, 854, 989, 1048
BstNSI RCATGY 1 cut(s) 809
BstSCI CCNGG 2 cut(s) 252, 350
BstSFI CTRYAG 1 cut(s) 834
BstUI CGCG 1 cut(s) 115
BstV1I GCAGC 2 cut(s) 295, 608
BstV2I GAAGAC 1 cut(s) 249
BstX2I RGATCY 1 cut(s) 470
BstYI RGATCY 1 cut(s) 470
BsuRI GGCC 3 cut(s) 165, 319, 417
BtgI CCRYGG 1 cut(s) 569
BtgZI GCGATG 1 cut(s) 973
BtrI CACGTC 1 cut(s) 393
BtsCI GGATG 4 cut(s) 722, 924, 983, 1002
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 2 cut(s) 741, 999
BveI ACCTGC 1 cut(s) 988
Cac8I GCNNGC 2 cut(s) 807, 924
CfoI GCGC 1 cut(s) 117
Cfr13I GGNCC 2 cut(s) 731, 815
CseI GACGC 1 cut(s) 644
Csp6I GTAC 1 cut(s) 520
CviAII CATG 5 cut(s) 570, 721, 806, 941, 1055
CviQI GTAC 1 cut(s) 520
DdeI CTNAG 2 cut(s) 321, 361
DpnI GATC 4 cut(s) 315, 369, 472, 663
DpnII GATC 4 cut(s) 313, 367, 470, 661
Eam1104I CTCTTC 4 cut(s) 70, 161, 546, 1092
EarI CTCTTC 4 cut(s) 70, 161, 546, 1092
Eco130I CCWWGG 2 cut(s) 569, 684
Eco47I GGWCC 2 cut(s) 731, 815
EcoRI GAATTC 1 cut(s) 342
EcoT14I CCWWGG 2 cut(s) 569, 684
EcoT22I ATGCAT 1 cut(s) 722
ErhI CCWWGG 2 cut(s) 569, 684
Esp3I CGTCTC 1 cut(s) 154
FaeI CATG 5 cut(s) 573, 724, 809, 944, 1058
FaqI GGGAC 3 cut(s) 92, 1013, 1077
FatI CATG 5 cut(s) 569, 720, 805, 940, 1054
FauI CCCGC 1 cut(s) 487
Fnu4HI GCNGC 4 cut(s) 232, 284, 378, 597
FokI GGATG 4 cut(s) 729, 931, 970, 989
Fsp4HI GCNGC 4 cut(s) 232, 284, 378, 597
FspBI CTAG 4 cut(s) 668, 680, 864, 1035
GlaI GCGC 1 cut(s) 116
GluI GCNGC 4 cut(s) 232, 284, 378, 597
GsaI CCCAGC 1 cut(s) 1034
HaeIII GGCC 3 cut(s) 165, 319, 417
HapII CCGG 3 cut(s) 171, 253, 351
HgaI GACGC 1 cut(s) 644
HhaI GCGC 1 cut(s) 117
Hin1II CATG 5 cut(s) 573, 724, 809, 944, 1058
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HincII GTYRAC 1 cut(s) 937
HindII GTYRAC 1 cut(s) 937
HindIII AAGCTT 1 cut(s) 323
HpaII CCGG 3 cut(s) 171, 253, 351
HphI GGTGA 2 cut(s) 181, 302
Hpy166II GTNNAC 1 cut(s) 937
Hpy188I TCNGA 5 cut(s) 241, 341, 348, 406, 504
Hpy188III TCNNGA 3 cut(s) 659, 774, 1094
Hpy8I GTNNAC 1 cut(s) 937
Hpy99I CGWCG 3 cut(s) 204, 341, 1100
HpyAV CCTTC 3 cut(s) 259, 411, 575
HpyCH4III ACNGT 1 cut(s) 875
HpyCH4IV ACGT 3 cut(s) 392, 578, 900
HpyCH4V TGCA 7 cut(s) 482, 720, 836, 975, 983, 1026, 1058
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 191, 854, 989, 1048
HpyF3I CTNAG 2 cut(s) 321, 361
HpySE526I ACGT 3 cut(s) 392, 578, 900
Hsp92II CATG 5 cut(s) 573, 724, 809, 944, 1058
HspAI GCGC 1 cut(s) 115
Kzo9I GATC 4 cut(s) 313, 367, 470, 661
LmnI GCTCC 3 cut(s) 78, 688, 1076
Lsp1109I GCAGC 2 cut(s) 295, 608
LweI GCATC 6 cut(s) 218, 469, 707, 857, 909, 992
MaeI CTAG 4 cut(s) 668, 680, 864, 1035
MaeII ACGT 3 cut(s) 392, 578, 900
MaeIII GTNAC 2 cut(s) 901, 962
MalI GATC 4 cut(s) 315, 369, 472, 663
MboI GATC 4 cut(s) 313, 367, 470, 661
MboII GAAGA 9 cut(s) 18, 57, 148, 172, 254, 499, 563, 736, 1079
MfeI CAATTG 1 cut(s) 858
MflI RGATCY 1 cut(s) 470
MhlI GDGCHC 1 cut(s) 1073
MluCI AATT 4 cut(s) 94, 342, 783, 858
MmeI TCCRAC 2 cut(s) 319, 1106
Mph1103I ATGCAT 1 cut(s) 722
MroXI GAANNNNTTC 2 cut(s) 697, 798
MslI CAYNNNNRTG 2 cut(s) 810, 992
MspA1I CMGCKG 1 cut(s) 365
MspI CCGG 3 cut(s) 171, 253, 351
MspR9I CCNGG 2 cut(s) 254, 352
MunI CAATTG 1 cut(s) 858
Mva1269I GAATGC 1 cut(s) 257
MvnI CGCG 1 cut(s) 115
MwoI GCNNNNNNNGC 5 cut(s) 79, 191, 854, 989, 1048
NciI CCSGG 2 cut(s) 254, 352
NcoI CCATGG 1 cut(s) 569
NdeII GATC 4 cut(s) 313, 367, 470, 661
NlaIII CATG 5 cut(s) 573, 724, 809, 944, 1058
NlaIV GGNNCC 1 cut(s) 175
NmeAIII GCCGAG 1 cut(s) 259
NmuCI GTSAC 1 cut(s) 962
NsiI ATGCAT 1 cut(s) 722
NspI RCATGY 1 cut(s) 809
PaeI GCATGC 1 cut(s) 809
PaqCI CACCTGC 1 cut(s) 988
PcsI WCGNNNNNNNCGW 1 cut(s) 911
PctI GAATGC 1 cut(s) 257
PdmI GAANNNNTTC 2 cut(s) 697, 798
PkrI GCNGC 4 cut(s) 233, 285, 379, 598
Psp1406I AACGTT 1 cut(s) 578
PspFI CCCAGC 1 cut(s) 1030
PspN4I GGNNCC 1 cut(s) 175
PspPI GGNCC 2 cut(s) 731, 815
PstI CTGCAG 1 cut(s) 838
PsuI RGATCY 1 cut(s) 470
PvuII CAGCTG 1 cut(s) 365
RsaI GTAC 1 cut(s) 521
RsaNI GTAC 1 cut(s) 520
RseI CAYNNNNRTG 2 cut(s) 810, 992
SatI GCNGC 4 cut(s) 232, 284, 378, 597
Sau3AI GATC 4 cut(s) 313, 367, 470, 661
Sau96I GGNCC 2 cut(s) 731, 815
ScrFI CCNGG 2 cut(s) 254, 352
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 6 cut(s) 218, 469, 707, 857, 909, 992
SfcI CTRYAG 1 cut(s) 834
SinI GGWCC 2 cut(s) 731, 815
SmiMI CAYNNNNRTG 2 cut(s) 810, 992
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
SphI GCATGC 1 cut(s) 809
Sse9I AATT 4 cut(s) 94, 342, 783, 858
SsiI CCGC 7 cut(s) 19, 45, 192, 231, 377, 385, 494
SspMI CTAG 4 cut(s) 668, 680, 864, 1035
StyD4I CCNGG 2 cut(s) 252, 350
StyI CCWWGG 2 cut(s) 569, 684
TaaI ACNGT 1 cut(s) 875
TaiI ACGT 3 cut(s) 395, 581, 903
TaqI TCGA 3 cut(s) 226, 272, 664
TasI AATT 4 cut(s) 94, 342, 783, 858
TatI WGTACW 1 cut(s) 519
TauI GCSGC 2 cut(s) 234, 380
TscAI CASTG 2 cut(s) 748, 999
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 2 cut(s) 283, 596
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 7 cut(s) 148, 564, 737, 770, 807, 944, 1043
TspGWI ACGGA 1 cut(s) 188
TspRI CASTG 2 cut(s) 748, 999
VpaK11BI GGWCC 2 cut(s) 731, 815
XapI RAATTY 1 cut(s) 342
XceI RCATGY 1 cut(s) 809
XmnI GAANNNNTTC 2 cut(s) 697, 798
XspI CTAG 4 cut(s) 668, 680, 864, 1035
Zsp2I ATGCAT 1 cut(s) 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.