Vacuolar-sorting receptor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30290 AT2G30290 |
| fragaria_vesca | FvH4_6g09810 FvH4_6g09810 FvH4_6g09810 |
| malus_domestica | MD04G1175100.v1.1 MD12G1188800.v1.1 |
| prunus_persica | Prupe.6G294400_v2.0.a1 Prupe.6G294400_v2.0.a1 |
| pyrus_communis | pycom04g15450 pycom12g17630 |
| rosa_chinensis | RchiOBHm_Chr3g0460421 RchiOBHm_Chr6g0252231 |
| rosa_laevigata | RLG00000025013 |
| rosa_multiflora | Rmu_co8220956.1_g000001 Rmu_co8306627.1_g000001 Rmu_sc0004267.1_g000012 Rmu_sc0006252.1_g000025 Rmu_sc0009799.1_g000013 Rmu_sc0021028.1_g000001 Rmu_sc0025932.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00419500 Rroxscaffold_7G00216220 |
| rosa_rugosa | Rorug03G0042500 |
| rosa_samantha | Rh3AG100500 Rh3BG104500 Rh3CG106300 Rh3DG105800 Rh6AG020100 Rh6BG015600 |
| rosa_wichuraiana | Rw3G008550 Rw6G001650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1767 |
| AatII | GACGTC | 1 cut(s) | 419 |
| Acc16I | TGCGCA | 1 cut(s) | 333 |
| AccB1I | GGYRCC | 1 cut(s) | 344 |
| AccI | GTMKAC | 1 cut(s) | 742 |
| AccII | CGCG | 1 cut(s) | 1587 |
| AccIII | TCCGGA | 1 cut(s) | 787 |
| AciI | CCGC | 8 cut(s) | 171, 188, 348, 365, 538, 606, 1470, 1635 |
| AclWI | GGATC | 6 cut(s) | 249, 300, 506, 603, 616, 622 |
| AcoI | YGGCCR | 2 cut(s) | 495, 1170 |
| AcsI | RAATTY | 3 cut(s) | 148, 844, 1776 |
| AcuI | CTGAAG | 2 cut(s) | 438, 744 |
| AcyI | GRCGYC | 2 cut(s) | 156, 416 |
| AdeI | CACNNNGTG | 1 cut(s) | 1391 |
| AfaI | GTAC | 1 cut(s) | 956 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 167 |
| AflII | CTTAAG | 2 cut(s) | 638, 1178 |
| AgsI | TTSAA | 3 cut(s) | 319, 986, 1355 |
| AjnI | CCWGG | 2 cut(s) | 710, 1510 |
| Alw21I | GWGCWC | 1 cut(s) | 787 |
| Alw26I | GTCTC | 3 cut(s) | 407, 1023, 1199 |
| AlwI | GGATC | 6 cut(s) | 249, 300, 506, 603, 616, 622 |
| Ama87I | CYCGRG | 2 cut(s) | 377, 1096 |
| Aor13HI | TCCGGA | 1 cut(s) | 787 |
| AoxI | GGCC | 3 cut(s) | 495, 1170, 1182 |
| ApeKI | GCWGC | 5 cut(s) | 656, 1497, 1632, 1739, 1742 |
| ApoI | RAATTY | 3 cut(s) | 148, 844, 1776 |
| AseI | ATTAAT | 1 cut(s) | 765 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 729 |
| AspLEI | GCGC | 1 cut(s) | 334 |
| AspS9I | GGNCC | 3 cut(s) | 585, 790, 1183 |
| AsuHPI | GGTGA | 4 cut(s) | 382, 700, 907, 1385 |
| AsuII | TTCGAA | 1 cut(s) | 1490 |
| AvaI | CYCGRG | 2 cut(s) | 377, 1096 |
| AvaII | GGWCC | 2 cut(s) | 585, 790 |
| BaeGI | GKGCMC | 2 cut(s) | 142, 1408 |
| BamHI | GGATCC | 1 cut(s) | 608 |
| BanI | GGYRCC | 1 cut(s) | 344 |
| BbsI | GAAGAC | 1 cut(s) | 1242 |
| Bbv12I | GWGCWC | 1 cut(s) | 787 |
| BbvI | GCAGC | 5 cut(s) | 643, 1484, 1644, 1729, 1751 |
| BccI | CCATC | 4 cut(s) | 125, 362, 494, 1520 |
| BceAI | ACGGC | 4 cut(s) | 184, 510, 1157, 1461 |
| BciT130I | CCWGG | 2 cut(s) | 712, 1512 |
| BciVI | GTATCC | 1 cut(s) | 809 |
| BclI | TGATCA | 2 cut(s) | 973, 1483 |
| BcoDI | GTCTC | 3 cut(s) | 407, 1023, 1199 |
| BfaI | CTAG | 3 cut(s) | 476, 530, 1868 |
| BfrI | CTTAAG | 2 cut(s) | 638, 1178 |
| BfuI | GTATCC | 1 cut(s) | 809 |
| BglII | AGATCT | 1 cut(s) | 470 |
| BisI | GCNGC | 6 cut(s) | 348, 657, 1498, 1633, 1740, 1743 |
| BlsI | GCNGC | 6 cut(s) | 349, 658, 1499, 1634, 1741, 1744 |
| Bme1390I | CCNGG | 2 cut(s) | 712, 1512 |
| Bme18I | GGWCC | 2 cut(s) | 585, 790 |
| BmeT110I | CYCGRG | 2 cut(s) | 377, 1096 |
| BmgT120I | GGNCC | 3 cut(s) | 585, 790, 1183 |
| BmiI | GGNNCC | 4 cut(s) | 346, 610, 792, 1215 |
| BmrFI | CCNGG | 2 cut(s) | 712, 1512 |
| BmsI | GCATC | 4 cut(s) | 412, 610, 1032, 1672 |
| BpiI | GAAGAC | 1 cut(s) | 1242 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 457, 489 |
| BpmI | CTGGAG | 1 cut(s) | 793 |
| Bpu10I | CCTNAGC | 2 cut(s) | 795, 1192 |
| Bpu14I | TTCGAA | 1 cut(s) | 1490 |
| BpuEI | CTTGAG | 1 cut(s) | 689 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1839 |
| BsaHI | GRCGYC | 2 cut(s) | 156, 416 |
| BsaJI | CCNNGG | 3 cut(s) | 142, 393, 893 |
| BsaWI | WCCGGW | 3 cut(s) | 182, 630, 787 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 987, 1017 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 167 |
| Bse1I | ACTGG | 1 cut(s) | 539 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1839 |
| BseAI | TCCGGA | 1 cut(s) | 787 |
| BseBI | CCWGG | 2 cut(s) | 712, 1512 |
| BseDI | CCNNGG | 3 cut(s) | 142, 393, 893 |
| BseGI | GGATG | 4 cut(s) | 415, 553, 1439, 1531 |
| BseJI | GATNNNNATC | 1 cut(s) | 1839 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BseMII | CTCAG | 4 cut(s) | 674, 786, 1206, 1809 |
| BseNI | ACTGG | 1 cut(s) | 539 |
| BseRI | GAGGAG | 6 cut(s) | 138, 312, 962, 1116, 1577, 1704 |
| BseSI | GKGCMC | 2 cut(s) | 142, 1408 |
| BseX3I | CGGCCG | 1 cut(s) | 1170 |
| BseXI | GCAGC | 5 cut(s) | 643, 1484, 1644, 1729, 1751 |
| BsgI | GTGCAG | 1 cut(s) | 1758 |
| Bsh1236I | CGCG | 1 cut(s) | 1587 |
| Bsh1285I | CGRYCG | 2 cut(s) | 565, 1173 |
| BshFI | GGCC | 3 cut(s) | 497, 1172, 1184 |
| BshNI | GGYRCC | 1 cut(s) | 344 |
| BsiEI | CGRYCG | 2 cut(s) | 565, 1173 |
| BsiHKAI | GWGCWC | 1 cut(s) | 787 |
| BsiHKCI | CYCGRG | 2 cut(s) | 377, 1096 |
| BsiSI | CCGG | 4 cut(s) | 110, 183, 631, 788 |
| BslFI | GGGAC | 4 cut(s) | 143, 921, 1328, 1329 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BsmAI | GTCTC | 3 cut(s) | 407, 1023, 1199 |
| BsmBI | CGTCTC | 2 cut(s) | 407, 1199 |
| BsmFI | GGGAC | 4 cut(s) | 143, 921, 1328, 1329 |
| BsmI | GAATGC | 2 cut(s) | 334, 608 |
| BsnI | GGCC | 3 cut(s) | 497, 1172, 1184 |
| BsoBI | CYCGRG | 2 cut(s) | 377, 1096 |
| Bsp119I | TTCGAA | 1 cut(s) | 1490 |
| Bsp1286I | GDGCHC | 3 cut(s) | 142, 787, 1408 |
| Bsp13I | TCCGGA | 1 cut(s) | 787 |
| Bsp19I | CCATGG | 1 cut(s) | 393 |
| Bsp68I | TCGCGA | 1 cut(s) | 1587 |
| BspACI | CCGC | 8 cut(s) | 171, 188, 348, 365, 538, 606, 1470, 1635 |
| BspANI | GGCC | 3 cut(s) | 497, 1172, 1184 |
| BspCNI | CTCAG | 4 cut(s) | 673, 787, 1205, 1808 |
| BspEI | TCCGGA | 1 cut(s) | 787 |
| BspFNI | CGCG | 1 cut(s) | 1587 |
| BspLI | GGNNCC | 4 cut(s) | 346, 610, 792, 1215 |
| BspPI | GGATC | 6 cut(s) | 249, 300, 506, 603, 616, 622 |
| BspQI | GCTCTTC | 1 cut(s) | 552 |
| BspT104I | TTCGAA | 1 cut(s) | 1490 |
| BspT107I | GGYRCC | 1 cut(s) | 344 |
| BspTI | CTTAAG | 2 cut(s) | 638, 1178 |
| BsrI | ACTGG | 1 cut(s) | 539 |
| BssECI | CCNNGG | 3 cut(s) | 142, 393, 893 |
| BssNI | GRCGYC | 2 cut(s) | 156, 416 |
| BssT1I | CCWWGG | 2 cut(s) | 393, 893 |
| Bst2UI | CCWGG | 2 cut(s) | 712, 1512 |
| Bst4CI | ACNGT | 4 cut(s) | 46, 593, 1379, 1762 |
| Bst6I | CTCTTC | 2 cut(s) | 552, 1324 |
| BstACI | GRCGYC | 2 cut(s) | 156, 416 |
| BstAFI | CTTAAG | 2 cut(s) | 638, 1178 |
| BstBI | TTCGAA | 1 cut(s) | 1490 |
| BstC8I | GCNNGC | 6 cut(s) | 220, 859, 1309, 1474, 1576, 1643 |
| BstDEI | CTNAG | 4 cut(s) | 660, 795, 1192, 1795 |
| BstDSI | CCRYGG | 1 cut(s) | 393 |
| BstF5I | GGATG | 4 cut(s) | 415, 553, 1439, 1531 |
| BstFNI | CGCG | 1 cut(s) | 1587 |
| BstHHI | GCGC | 1 cut(s) | 334 |
| BstMAI | GTCTC | 3 cut(s) | 407, 1023, 1199 |
| BstMCI | CGRYCG | 2 cut(s) | 565, 1173 |
| BstNI | CCWGG | 2 cut(s) | 712, 1512 |
| BstNSI | RCATGY | 2 cut(s) | 181, 1828 |
| BstSCI | CCNGG | 2 cut(s) | 710, 1510 |
| BstSLI | GKGCMC | 2 cut(s) | 142, 1408 |
| BstUI | CGCG | 1 cut(s) | 1587 |
| BstV1I | GCAGC | 5 cut(s) | 643, 1484, 1644, 1729, 1751 |
| BstV2I | GAAGAC | 1 cut(s) | 1242 |
| BstX2I | RGATCY | 4 cut(s) | 254, 470, 608, 627 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 361 |
| BstYI | RGATCY | 4 cut(s) | 254, 470, 608, 627 |
| BstZI | CGGCCG | 1 cut(s) | 1170 |
| BsuI | GTATCC | 1 cut(s) | 809 |
| BsuRI | GGCC | 3 cut(s) | 497, 1172, 1184 |
| BtgI | CCRYGG | 1 cut(s) | 393 |
| BtsCI | GGATG | 4 cut(s) | 415, 553, 1439, 1531 |
| BtsIMutI | CAGTG | 1 cut(s) | 1758 |
| BtuMI | TCGCGA | 1 cut(s) | 1587 |
| Cac8I | GCNNGC | 6 cut(s) | 220, 859, 1309, 1474, 1576, 1643 |
| CfoI | GCGC | 1 cut(s) | 334 |
| Cfr13I | GGNCC | 3 cut(s) | 585, 790, 1183 |
| CseI | GACGC | 3 cut(s) | 145, 407, 1046 |
| CsiI | ACCWGGT | 1 cut(s) | 710 |
| Csp6I | GTAC | 1 cut(s) | 955 |
| CviAII | CATG | 7 cut(s) | 60, 178, 394, 506, 940, 1608, 1825 |
| CviQI | GTAC | 1 cut(s) | 955 |
| DdeI | CTNAG | 4 cut(s) | 660, 795, 1192, 1795 |
| DraI | TTTAAA | 1 cut(s) | 649 |
| DraIII | CACNNNGTG | 1 cut(s) | 1391 |
| EaeI | YGGCCR | 2 cut(s) | 495, 1170 |
| EagI | CGGCCG | 1 cut(s) | 1170 |
| Eam1104I | CTCTTC | 2 cut(s) | 552, 1324 |
| EarI | CTCTTC | 2 cut(s) | 552, 1324 |
| EciI | GGCGGA | 2 cut(s) | 186, 380 |
| EclXI | CGGCCG | 1 cut(s) | 1170 |
| Eco130I | CCWWGG | 2 cut(s) | 393, 893 |
| Eco47I | GGWCC | 2 cut(s) | 585, 790 |
| Eco52I | CGGCCG | 1 cut(s) | 1170 |
| Eco57I | CTGAAG | 2 cut(s) | 438, 744 |
| Eco88I | CYCGRG | 2 cut(s) | 377, 1096 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1183 |
| EcoRI | GAATTC | 1 cut(s) | 1776 |
| EcoRII | CCWGG | 2 cut(s) | 710, 1510 |
| EcoT14I | CCWWGG | 2 cut(s) | 393, 893 |
| EcoT22I | ATGCAT | 2 cut(s) | 764, 1025 |
| ErhI | CCWWGG | 2 cut(s) | 393, 893 |
| Esp3I | CGTCTC | 2 cut(s) | 407, 1199 |
| FaeI | CATG | 7 cut(s) | 63, 181, 397, 509, 943, 1611, 1828 |
| FaqI | GGGAC | 4 cut(s) | 143, 921, 1328, 1329 |
| FatI | CATG | 7 cut(s) | 59, 177, 393, 505, 939, 1607, 1824 |
| FauI | CCCGC | 1 cut(s) | 531 |
| FbaI | TGATCA | 2 cut(s) | 973, 1483 |
| FblI | GTMKAC | 1 cut(s) | 742 |
| Fnu4HI | GCNGC | 6 cut(s) | 348, 657, 1498, 1633, 1740, 1743 |
| FokI | GGATG | 4 cut(s) | 422, 540, 1446, 1538 |
| Fsp4HI | GCNGC | 6 cut(s) | 348, 657, 1498, 1633, 1740, 1743 |
| FspBI | CTAG | 3 cut(s) | 476, 530, 1868 |
| FspI | TGCGCA | 1 cut(s) | 333 |
| GlaI | GCGC | 1 cut(s) | 333 |
| GluI | GCNGC | 6 cut(s) | 348, 657, 1498, 1633, 1740, 1743 |
| GsuI | CTGGAG | 1 cut(s) | 793 |
| HaeIII | GGCC | 3 cut(s) | 497, 1172, 1184 |
| HapII | CCGG | 4 cut(s) | 110, 183, 631, 788 |
| HgaI | GACGC | 3 cut(s) | 145, 407, 1046 |
| HhaI | GCGC | 1 cut(s) | 334 |
| Hin1I | GRCGYC | 2 cut(s) | 156, 416 |
| Hin1II | CATG | 7 cut(s) | 63, 181, 397, 509, 943, 1611, 1828 |
| Hin6I | GCGC | 1 cut(s) | 332 |
| HinP1I | GCGC | 1 cut(s) | 332 |
| HindIII | AAGCTT | 4 cut(s) | 216, 855, 1395, 1639 |
| HinfI | GANTC | 7 cut(s) | 113, 126, 261, 664, 1515, 1530, 1793 |
| HpaII | CCGG | 4 cut(s) | 110, 183, 631, 788 |
| HphI | GGTGA | 4 cut(s) | 382, 700, 907, 1385 |
| Hpy166II | GTNNAC | 2 cut(s) | 743, 1259 |
| Hpy8I | GTNNAC | 2 cut(s) | 743, 1259 |
| Hpy99I | CGWCG | 2 cut(s) | 13, 1213 |
| HpyAV | CCTTC | 3 cut(s) | 313, 462, 768 |
| HpyCH4III | ACNGT | 4 cut(s) | 46, 593, 1379, 1762 |
| HpyCH4IV | ACGT | 3 cut(s) | 416, 831, 1411 |
| HpyF3I | CTNAG | 4 cut(s) | 660, 795, 1192, 1795 |
| HpySE526I | ACGT | 3 cut(s) | 416, 831, 1411 |
| Hsp92I | GRCGYC | 2 cut(s) | 156, 416 |
| Hsp92II | CATG | 7 cut(s) | 63, 181, 397, 509, 943, 1611, 1828 |
| HspAI | GCGC | 1 cut(s) | 332 |
| Kpn2I | TCCGGA | 1 cut(s) | 787 |
| Ksp22I | TGATCA | 2 cut(s) | 973, 1483 |
| LguI | GCTCTTC | 1 cut(s) | 552 |
| LmnI | GCTCC | 4 cut(s) | 653, 790, 1213, 1751 |
| Lsp1109I | GCAGC | 5 cut(s) | 643, 1484, 1644, 1729, 1751 |
| LweI | GCATC | 4 cut(s) | 412, 610, 1032, 1672 |
| MabI | ACCWGGT | 1 cut(s) | 710 |
| MaeI | CTAG | 3 cut(s) | 476, 530, 1868 |
| MaeII | ACGT | 3 cut(s) | 416, 831, 1411 |
| MaeIII | GTNAC | 7 cut(s) | 40, 100, 305, 871, 913, 1108, 1373 |
| MboII | GAAGA | 8 cut(s) | 97, 539, 1018, 1079, 1247, 1295, 1341, 1851 |
| MflI | RGATCY | 4 cut(s) | 254, 470, 608, 627 |
| MhlI | GDGCHC | 3 cut(s) | 142, 787, 1408 |
| MluCI | AATT | 7 cut(s) | 148, 447, 834, 844, 1011, 1157, 1776 |
| MlyI | GAGTC | 5 cut(s) | 122, 135, 270, 1524, 1787 |
| MmeI | TCCRAC | 1 cut(s) | 1418 |
| Mph1103I | ATGCAT | 2 cut(s) | 764, 1025 |
| MroI | TCCGGA | 1 cut(s) | 787 |
| MroXI | GAANNNNTTC | 1 cut(s) | 729 |
| MseI | TTAA | 6 cut(s) | 639, 648, 765, 1062, 1179, 1229 |
| MslI | CAYNNNNRTG | 2 cut(s) | 359, 392 |
| MspA1I | CMGCKG | 2 cut(s) | 1635, 1742 |
| MspCI | CTTAAG | 2 cut(s) | 638, 1178 |
| MspI | CCGG | 4 cut(s) | 110, 183, 631, 788 |
| MspR9I | CCNGG | 2 cut(s) | 712, 1512 |
| Mva1269I | GAATGC | 2 cut(s) | 334, 608 |
| MvaI | CCWGG | 2 cut(s) | 712, 1512 |
| MvnI | CGCG | 1 cut(s) | 1587 |
| NcoI | CCATGG | 1 cut(s) | 393 |
| NlaIII | CATG | 7 cut(s) | 63, 181, 397, 509, 943, 1611, 1828 |
| NlaIV | GGNNCC | 4 cut(s) | 346, 610, 792, 1215 |
| NmuCI | GTSAC | 5 cut(s) | 100, 871, 913, 1108, 1373 |
| NruI | TCGCGA | 1 cut(s) | 1587 |
| NsbI | TGCGCA | 1 cut(s) | 333 |
| NsiI | ATGCAT | 2 cut(s) | 764, 1025 |
| NspI | RCATGY | 2 cut(s) | 181, 1828 |
| NspV | TTCGAA | 1 cut(s) | 1490 |
| PaeR7I | CTCGAG | 1 cut(s) | 1096 |
| PciSI | GCTCTTC | 1 cut(s) | 552 |
| PctI | GAATGC | 2 cut(s) | 334, 608 |
| PdmI | GAANNNNTTC | 1 cut(s) | 729 |
| PfeI | GAWTC | 2 cut(s) | 664, 1515 |
| PfoI | TCCNGGA | 1 cut(s) | 1510 |
| PkrI | GCNGC | 6 cut(s) | 349, 658, 1499, 1634, 1741, 1744 |
| Ple19I | CGATCG | 1 cut(s) | 565 |
| PleI | GAGTC | 5 cut(s) | 121, 134, 269, 1524, 1787 |
| PpsI | GAGTC | 5 cut(s) | 121, 134, 269, 1524, 1787 |
| PshBI | ATTAAT | 1 cut(s) | 765 |
| PsiI | TTATAA | 1 cut(s) | 1767 |
| Psp6I | CCWGG | 2 cut(s) | 710, 1510 |
| PspGI | CCWGG | 2 cut(s) | 710, 1510 |
| PspN4I | GGNNCC | 4 cut(s) | 346, 610, 792, 1215 |
| PspPI | GGNCC | 3 cut(s) | 585, 790, 1183 |
| PsuI | RGATCY | 4 cut(s) | 254, 470, 608, 627 |
| PvuI | CGATCG | 1 cut(s) | 565 |
| PvuII | CAGCTG | 1 cut(s) | 1742 |
| RruI | TCGCGA | 1 cut(s) | 1587 |
| RsaI | GTAC | 1 cut(s) | 956 |
| RsaNI | GTAC | 1 cut(s) | 955 |
| RseI | CAYNNNNRTG | 2 cut(s) | 359, 392 |
| SapI | GCTCTTC | 1 cut(s) | 552 |
| SaqAI | TTAA | 6 cut(s) | 639, 648, 765, 1062, 1179, 1229 |
| SatI | GCNGC | 6 cut(s) | 348, 657, 1498, 1633, 1740, 1743 |
| Sau96I | GGNCC | 3 cut(s) | 585, 790, 1183 |
| SchI | GAGTC | 5 cut(s) | 122, 135, 270, 1524, 1787 |
| ScrFI | CCNGG | 2 cut(s) | 712, 1512 |
| SduI | GDGCHC | 3 cut(s) | 142, 787, 1408 |
| SexAI | ACCWGGT | 1 cut(s) | 710 |
| SfaNI | GCATC | 4 cut(s) | 412, 610, 1032, 1672 |
| Sfr274I | CTCGAG | 1 cut(s) | 1096 |
| SfuI | TTCGAA | 1 cut(s) | 1490 |
| SinI | GGWCC | 2 cut(s) | 585, 790 |
| SlaI | CTCGAG | 1 cut(s) | 1096 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 359, 392 |
| SmlI | CTYRAG | 4 cut(s) | 638, 668, 1096, 1178 |
| SmoI | CTYRAG | 4 cut(s) | 638, 668, 1096, 1178 |
| Sse9I | AATT | 7 cut(s) | 148, 447, 834, 844, 1011, 1157, 1776 |
| SsiI | CCGC | 8 cut(s) | 171, 188, 348, 365, 538, 606, 1470, 1635 |
| SspMI | CTAG | 3 cut(s) | 476, 530, 1868 |
| StyD4I | CCNGG | 2 cut(s) | 710, 1510 |
| StyI | CCWWGG | 2 cut(s) | 393, 893 |
| TaaI | ACNGT | 4 cut(s) | 46, 593, 1379, 1762 |
| TaiI | ACGT | 3 cut(s) | 419, 834, 1414 |
| TaqI | TCGA | 4 cut(s) | 295, 565, 1097, 1490 |
| TasI | AATT | 7 cut(s) | 148, 447, 834, 844, 1011, 1157, 1776 |
| TatI | WGTACW | 1 cut(s) | 954 |
| TauI | GCSGC | 1 cut(s) | 350 |
| TfiI | GAWTC | 2 cut(s) | 664, 1515 |
| Tru1I | TTAA | 6 cut(s) | 639, 648, 765, 1062, 1179, 1229 |
| Tru9I | TTAA | 6 cut(s) | 639, 648, 765, 1062, 1179, 1229 |
| TscAI | CASTG | 1 cut(s) | 1765 |
| TseFI | GTSAC | 5 cut(s) | 100, 871, 913, 1108, 1373 |
| TseI | GCWGC | 5 cut(s) | 656, 1497, 1632, 1739, 1742 |
| Tsp45I | GTSAC | 5 cut(s) | 100, 871, 913, 1108, 1373 |
| TspDTI | ATGAA | 8 cut(s) | 48, 147, 509, 615, 894, 956, 1507, 1635 |
| TspGWI | ACGGA | 1 cut(s) | 1226 |
| TspRI | CASTG | 1 cut(s) | 1765 |
| Vha464I | CTTAAG | 2 cut(s) | 638, 1178 |
| VpaK11BI | GGWCC | 2 cut(s) | 585, 790 |
| VspI | ATTAAT | 1 cut(s) | 765 |
| XapI | RAATTY | 3 cut(s) | 148, 844, 1776 |
| XbaI | TCTAGA | 1 cut(s) | 529 |
| XceI | RCATGY | 2 cut(s) | 181, 1828 |
| XhoI | CTCGAG | 1 cut(s) | 1096 |
| XmiI | GTMKAC | 1 cut(s) | 742 |
| XmnI | GAANNNNTTC | 1 cut(s) | 729 |
| XspI | CTAG | 3 cut(s) | 476, 530, 1868 |
| ZraI | GACGTC | 1 cut(s) | 417 |
| Zsp2I | ATGCAT | 2 cut(s) | 764, 1025 |