Rmu_sc0004267.1_g000012

receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004267.1
Physical Location & Seq
Reverse (-)
60353 .. 64487
4135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004267.1_g000012.1.cds

Sequence Viewer

Length: 1569 bp
atgaaggaaaagattggatttttagtgtttgtttggtttttgctatgtgggttttgtgtggggaggtttgtggtggagaagaacagcttgaaagtgacttccccaaactcattgaaggatgtttatgaatgtgcaattgggaattttggggttcctcagtatggaggaaccttggttgggactgtatattatcccaaggctaatcaaaaagcatgcaagagttttgaagatttcgatatcgcattcaaatcaaagcctggtggattacctacctttcttcttgcggatcgaggagattgttacttcacattgaaggcttggaatgcacaaaatggtggagcggccgctattcttgttgcagatgacagaactgaaccattgattaccatggacactcctgaggaagaaaaggaagatgctgattatctgcagaaaattgcaattccctcggcccttatcagcaaatctttgggggatagcattaaaaaagctctatctgatggggagatggtcaacattaatctagactggacagaggctcttccacatcctgacgagcgtgttgagtatgagttctggacaaacagcaatgatgagtgtggaccaaagtgtgacagccagattgattttgtgaagaactttaaaggagctgctcaggtacttgagcggaaggggtacacacagtttactccacactatattacttggtactgcccagacgcttttgttttgagcaaacagtgcaaggctcagtgcattaatcatgggaggtactgtgctccagatcccgaacaggattttagtaaaggttatgatgggaaagatgttgtggttcaaaatctccgtcaagcttgcttctataaagtggccaatgaaagtggaaggccatggctttggtgggactatgtgactgactttgcgattcgatgcccaatgaaagagaaaaagtacacttctgagtgtgcaaatcaagttattgaatccttgggtgttgatcttaagaagatacagaaatgtattggggatcctaaggcaaatgaggagaatgcggttctaaaggctgaacaggatgcacagattggcaagggctcccgtggagatgttaccatattgccaactcttattataaacaacagacagtacagaggaaaattagccaaaggagctgttctcaaggccatctgtgctggttttcaagagactactgagcctgctgtgtgtttgagtgaagatgttgatgagtgtgaggaaaaagtggcttgccaatgtgcacaatgtaaatgcaagaatacttggggcagttatgagtgcagctgtggtggtggtttactgtacatgcgagagcatgatgcatgtataagtcaaaatgccaggaatacagagtatagctggagctttatttgggttatcattctatgcttgggtgctgttggagttggaggatatgcagtttacaagtacagaatccgaagatacatggactcggagatccgggcaatcatggcacagtacatgccattggataatcaaggagaaattcctaatcatgtctcccgtggtgatatctga

Protein Analysis

522

Amino Acids

58.46

Weight (kDa)

5.39

Isoelectric Point (pI)

34.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1127
AccBSI CCGCTC 2 cut(s) 341, 667
AciI CCGC 5 cut(s) 284, 341, 345, 667, 1049
AclWI GGATC 5 cut(s) 294, 779, 1019, 1032, 1483
AcoI YGGCCR 2 cut(s) 342, 867
AcsI RAATTY 2 cut(s) 142, 1536
AfaI GTAC 9 cut(s) 660, 677, 710, 773, 950, 1142, 1334, 1460, 1511
AfiI CCNNNNNNNGG 2 cut(s) 161, 177
AflII CTTAAG 1 cut(s) 998
AgsI TTSAA 8 cut(s) 91, 115, 227, 247, 313, 836, 980, 1196
AjnI CCWGG 2 cut(s) 256, 1370
AjuI GAANNNNNNNTTGG 2 cut(s) 120, 152
AluBI AGCT 8 cut(s) 87, 491, 650, 851, 1166, 1314, 1389, 1395
AluI AGCT 8 cut(s) 87, 491, 650, 851, 1166, 1314, 1389, 1395
Alw21I GWGCWC 2 cut(s) 781, 1273
Alw26I GTCTC 2 cut(s) 1193, 1555
Alw44I GTGCAC 1 cut(s) 1269
AlwI GGATC 5 cut(s) 294, 779, 1019, 1032, 1483
AoxI GGCC 5 cut(s) 342, 450, 867, 884, 1176
ApaLI GTGCAC 1 cut(s) 1269
ApeKI GCWGC 2 cut(s) 650, 1311
ApoI RAATTY 2 cut(s) 142, 1536
ArsI GACNNNNNNTTYG 2 cut(s) 829, 861
AseI ATTAAT 2 cut(s) 519, 759
AspS9I GGNCC 2 cut(s) 451, 602
AsuC2I CCSGG 1 cut(s) 1493
AvaII GGWCC 1 cut(s) 602
AxyI CCTNAGG 2 cut(s) 399, 1029
BaeGI GKGCMC 1 cut(s) 1273
BalI TGGCCA 1 cut(s) 869
BamHI GGATCC 1 cut(s) 1024
BanII GRGCYC 1 cut(s) 1091
Bbv12I GWGCWC 2 cut(s) 781, 1273
BbvI GCAGC 2 cut(s) 637, 1323
BccI CCATC 4 cut(s) 494, 502, 809, 1187
BcgI CGANNNNNNTGC 2 cut(s) 429, 463
BciT130I CCWGG 2 cut(s) 258, 1372
BcnI CCSGG 1 cut(s) 1493
BcoDI GTCTC 2 cut(s) 1193, 1555
BfaI CTAG 1 cut(s) 524
BfmI CTRYAG 1 cut(s) 428
BfrI CTTAAG 1 cut(s) 998
BisI GCNGC 4 cut(s) 342, 345, 651, 1312
BlsI GCNGC 4 cut(s) 343, 346, 652, 1313
Bme1390I CCNGG 3 cut(s) 258, 1372, 1493
Bme18I GGWCC 1 cut(s) 602
BmgT120I GGNCC 2 cut(s) 451, 602
BmiI GGNNCC 4 cut(s) 153, 169, 1026, 1090
BmrFI CCNGG 3 cut(s) 258, 1372, 1493
BmsI GCATC 4 cut(s) 406, 917, 1060, 1339
BplI GAGNNNNNCTC 2 cut(s) 1155, 1187
BpmI CTGGAG 2 cut(s) 765, 1411
Bpu10I CCTNAGC 1 cut(s) 654
BpuEI CTTGAG 2 cut(s) 683, 1157
BpuMI CCSGG 1 cut(s) 1493
BsaJI CCNNGG 8 cut(s) 171, 195, 387, 447, 887, 984, 1093, 1555
BsaXI ACNNNNNCTCC 2 cut(s) 760, 790
Bsc4I CCNNNNNNNGG 2 cut(s) 161, 177
Bse1I ACTGG 1 cut(s) 533
Bse21I CCTNAGG 2 cut(s) 399, 1029
Bse3DI GCAATG 1 cut(s) 595
BseBI CCWGG 2 cut(s) 258, 1372
BseDI CCNNGG 8 cut(s) 171, 195, 387, 447, 887, 984, 1093, 1555
BseGI GGATG 3 cut(s) 124, 547, 1075
BseLI CCNNNNNNNGG 2 cut(s) 161, 177
BseMI GCAATG 1 cut(s) 595
BseMII CTCAG 6 cut(s) 170, 390, 668, 764, 948, 1197
BseNI ACTGG 1 cut(s) 533
BseRI GAGGAG 2 cut(s) 306, 1055
BseSI GKGCMC 1 cut(s) 1273
BseX3I CGGCCG 1 cut(s) 342
BseXI GCAGC 2 cut(s) 637, 1323
BsgI GTGCAG 1 cut(s) 1330
Bsh1285I CGRYCG 1 cut(s) 345
BshFI GGCC 5 cut(s) 344, 452, 869, 886, 1178
BsiEI CGRYCG 1 cut(s) 345
BsiHKAI GWGCWC 2 cut(s) 781, 1273
BsiSI CCGG 1 cut(s) 1492
BslFI GGGAC 2 cut(s) 193, 914
BslI CCNNNNNNNGG 2 cut(s) 161, 177
BsmAI GTCTC 2 cut(s) 1193, 1555
BsmFI GGGAC 2 cut(s) 193, 914
BsmI GAATGC 3 cut(s) 242, 328, 1051
BsnI GGCC 5 cut(s) 344, 452, 869, 886, 1178
Bsp1286I GDGCHC 3 cut(s) 781, 1091, 1273
Bsp1407I TGTACA 1 cut(s) 1332
Bsp143I GATC 5 cut(s) 286, 784, 994, 1024, 1488
Bsp19I CCATGG 2 cut(s) 387, 887
BspACI CCGC 5 cut(s) 284, 341, 345, 667, 1049
BspANI GGCC 5 cut(s) 344, 452, 869, 886, 1178
BspCNI CTCAG 6 cut(s) 169, 391, 667, 763, 949, 1198
BspLI GGNNCC 4 cut(s) 153, 169, 1026, 1090
BspMAI CTGCAG 1 cut(s) 432
BspPI GGATC 5 cut(s) 294, 779, 1019, 1032, 1483
BspQI GCTCTTC 1 cut(s) 546
BspTI CTTAAG 1 cut(s) 998
BsrBI CCGCTC 2 cut(s) 341, 667
BsrDI GCAATG 1 cut(s) 595
BsrGI TGTACA 1 cut(s) 1332
BsrI ACTGG 1 cut(s) 533
BssECI CCNNGG 8 cut(s) 171, 195, 387, 447, 887, 984, 1093, 1555
BssMI GATC 5 cut(s) 286, 784, 994, 1024, 1488
BssT1I CCWWGG 5 cut(s) 171, 195, 387, 887, 984
Bst2UI CCWGG 2 cut(s) 258, 1372
Bst4CI ACNGT 7 cut(s) 184, 684, 741, 776, 1140, 1332, 1509
Bst6I CTCTTC 1 cut(s) 546
BstAFI CTTAAG 1 cut(s) 998
BstAPI GCANNNNNTGC 1 cut(s) 741
BstAUI TGTACA 1 cut(s) 1332
BstC8I GCNNGC 4 cut(s) 214, 853, 1212, 1261
BstDEI CTNAG 7 cut(s) 156, 399, 654, 750, 957, 1029, 1206
BstDSI CCRYGG 4 cut(s) 387, 887, 1093, 1555
BstF5I GGATG 3 cut(s) 124, 547, 1075
BstKTI GATC 5 cut(s) 289, 787, 997, 1027, 1491
BstMAI GTCTC 2 cut(s) 1193, 1555
BstMBI GATC 5 cut(s) 286, 784, 994, 1024, 1488
BstMCI CGRYCG 1 cut(s) 345
BstMWI GCNNNNNNNGC 5 cut(s) 323, 741, 1163, 1184, 1502
BstNI CCWGG 2 cut(s) 258, 1372
BstNSI RCATGY 4 cut(s) 216, 1339, 1356, 1516
BstSCI CCNGG 3 cut(s) 256, 1370, 1491
BstSFI CTRYAG 1 cut(s) 428
BstSLI GKGCMC 1 cut(s) 1273
BstV1I GCAGC 2 cut(s) 637, 1323
BstX2I RGATCY 3 cut(s) 784, 1024, 1488
BstXI CCANNNNNNTGG 1 cut(s) 894
BstYI RGATCY 3 cut(s) 784, 1024, 1488
BstZI CGGCCG 1 cut(s) 342
Bsu36I CCTNAGG 2 cut(s) 399, 1029
BsuRI GGCC 5 cut(s) 344, 452, 869, 886, 1178
BtgI CCRYGG 4 cut(s) 387, 887, 1093, 1555
BtsCI GGATG 3 cut(s) 124, 547, 1075
BtsIMutI CAGTG 2 cut(s) 746, 758
Cac8I GCNNGC 4 cut(s) 214, 853, 1212, 1261
CciNI GCGGCCGC 1 cut(s) 342
Cfr13I GGNCC 2 cut(s) 451, 602
CseI GACGC 1 cut(s) 728
Csp6I GTAC 9 cut(s) 659, 676, 709, 772, 949, 1141, 1333, 1459, 1510
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviQI GTAC 9 cut(s) 659, 676, 709, 772, 949, 1141, 1333, 1459, 1510
DdeI CTNAG 7 cut(s) 156, 399, 654, 750, 957, 1029, 1206
DpnI GATC 5 cut(s) 288, 786, 996, 1026, 1490
DpnII GATC 5 cut(s) 286, 784, 994, 1024, 1488
DraI TTTAAA 1 cut(s) 643
EaeI YGGCCR 2 cut(s) 342, 867
EagI CGGCCG 1 cut(s) 342
Eam1104I CTCTTC 1 cut(s) 546
EarI CTCTTC 1 cut(s) 546
EclXI CGGCCG 1 cut(s) 342
Eco130I CCWWGG 5 cut(s) 171, 195, 387, 887, 984
Eco24I GRGCYC 1 cut(s) 1091
Eco32I GATATC 2 cut(s) 238, 1564
Eco47I GGWCC 1 cut(s) 602
Eco52I CGGCCG 1 cut(s) 342
Eco81I CCTNAGG 2 cut(s) 399, 1029
EcoRII CCWGG 2 cut(s) 256, 1370
EcoRV GATATC 2 cut(s) 238, 1564
EcoT14I CCWWGG 5 cut(s) 171, 195, 387, 887, 984
EcoT22I ATGCAT 1 cut(s) 1354
EcoT38I GRGCYC 1 cut(s) 1091
ErhI CCWWGG 5 cut(s) 171, 195, 387, 887, 984
FalI AAGNNNNNCTT 2 cut(s) 71, 103
FaqI GGGAC 2 cut(s) 193, 914
Fnu4HI GCNGC 4 cut(s) 342, 345, 651, 1312
FokI GGATG 3 cut(s) 131, 534, 1082
FriOI GRGCYC 1 cut(s) 1091
Fsp4HI GCNGC 4 cut(s) 342, 345, 651, 1312
FspBI CTAG 1 cut(s) 524
GluI GCNGC 4 cut(s) 342, 345, 651, 1312
GsuI CTGGAG 2 cut(s) 765, 1411
HaeIII GGCC 5 cut(s) 344, 452, 869, 886, 1178
HapII CCGG 1 cut(s) 1492
HgaI GACGC 1 cut(s) 728
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 4 cut(s) 922, 980, 1464, 1481
HpaII CCGG 1 cut(s) 1492
Hpy166II GTNNAC 8 cut(s) 514, 602, 678, 687, 951, 1271, 1328, 1453
Hpy188I TCNGA 5 cut(s) 499, 958, 1469, 1486, 1568
Hpy188III TCNNGA 7 cut(s) 398, 524, 551, 577, 782, 788, 1196
Hpy8I GTNNAC 8 cut(s) 514, 602, 678, 687, 951, 1271, 1328, 1453
HpyAV CCTTC 4 cut(s) 109, 307, 664, 876
HpyCH4III ACNGT 7 cut(s) 184, 684, 741, 776, 1140, 1332, 1509
HpyF10VI GCNNNNNNNGC 5 cut(s) 323, 741, 1163, 1184, 1502
HpyF3I CTNAG 7 cut(s) 156, 399, 654, 750, 957, 1029, 1206
Kzo9I GATC 5 cut(s) 286, 784, 994, 1024, 1488
LguI GCTCTTC 1 cut(s) 546
LmnI GCTCC 6 cut(s) 338, 647, 784, 1094, 1163, 1392
Lsp1109I GCAGC 2 cut(s) 637, 1323
LweI GCATC 4 cut(s) 406, 917, 1060, 1339
MaeI CTAG 1 cut(s) 524
MaeIII GTNAC 5 cut(s) 94, 299, 611, 907, 1102
MalI GATC 5 cut(s) 288, 786, 996, 1026, 1490
MbiI CCGCTC 2 cut(s) 341, 667
MboI GATC 5 cut(s) 286, 784, 994, 1024, 1488
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 3 cut(s) 784, 1024, 1488
MhlI GDGCHC 3 cut(s) 781, 1091, 1273
MlsI TGGCCA 1 cut(s) 869
MluCI AATT 6 cut(s) 135, 142, 435, 441, 1151, 1536
MluNI TGGCCA 1 cut(s) 869
MlyI GAGTC 1 cut(s) 1475
MmeI TCCRAC 2 cut(s) 1411, 1417
Mox20I TGGCCA 1 cut(s) 869
Mph1103I ATGCAT 1 cut(s) 1354
MscI TGGCCA 1 cut(s) 869
MseI TTAA 5 cut(s) 483, 519, 642, 759, 999
Msp20I TGGCCA 1 cut(s) 869
MspA1I CMGCKG 1 cut(s) 1314
MspCI CTTAAG 1 cut(s) 998
MspI CCGG 1 cut(s) 1492
MspR9I CCNGG 3 cut(s) 258, 1372, 1493
MunI CAATTG 1 cut(s) 135
Mva1269I GAATGC 3 cut(s) 242, 328, 1051
MvaI CCWGG 2 cut(s) 258, 1372
MwoI GCNNNNNNNGC 5 cut(s) 323, 741, 1163, 1184, 1502
NciI CCSGG 1 cut(s) 1493
NcoI CCATGG 2 cut(s) 387, 887
NdeII GATC 5 cut(s) 286, 784, 994, 1024, 1488
NlaIV GGNNCC 4 cut(s) 153, 169, 1026, 1090
NmeAIII GCCGAG 1 cut(s) 428
NmuCI GTSAC 3 cut(s) 94, 611, 907
NotI GCGGCCGC 1 cut(s) 342
NsiI ATGCAT 1 cut(s) 1354
NspI RCATGY 4 cut(s) 216, 1339, 1356, 1516
PaeI GCATGC 1 cut(s) 216
PciSI GCTCTTC 1 cut(s) 546
PctI GAATGC 3 cut(s) 242, 328, 1051
PfeI GAWTC 3 cut(s) 922, 980, 1464
PkrI GCNGC 4 cut(s) 343, 346, 652, 1313
PleI GAGTC 1 cut(s) 1475
PpsI GAGTC 1 cut(s) 1475
PshBI ATTAAT 2 cut(s) 519, 759
PsiI TTATAA 1 cut(s) 1127
Psp6I CCWGG 2 cut(s) 256, 1370
PspGI CCWGG 2 cut(s) 256, 1370
PspN4I GGNNCC 4 cut(s) 153, 169, 1026, 1090
PspPI GGNCC 2 cut(s) 451, 602
PstI CTGCAG 1 cut(s) 432
PsuI RGATCY 3 cut(s) 784, 1024, 1488
PvuII CAGCTG 1 cut(s) 1314
RsaI GTAC 9 cut(s) 660, 677, 710, 773, 950, 1142, 1334, 1460, 1511
RsaNI GTAC 9 cut(s) 659, 676, 709, 772, 949, 1141, 1333, 1459, 1510
SapI GCTCTTC 1 cut(s) 546
SaqAI TTAA 5 cut(s) 483, 519, 642, 759, 999
SatI GCNGC 4 cut(s) 342, 345, 651, 1312
Sau3AI GATC 5 cut(s) 286, 784, 994, 1024, 1488
Sau96I GGNCC 2 cut(s) 451, 602
SchI GAGTC 1 cut(s) 1475
ScrFI CCNGG 3 cut(s) 258, 1372, 1493
SduI GDGCHC 3 cut(s) 781, 1091, 1273
SfaNI GCATC 4 cut(s) 406, 917, 1060, 1339
SfcI CTRYAG 1 cut(s) 428
SinI GGWCC 1 cut(s) 602
SmlI CTYRAG 3 cut(s) 662, 998, 1172
SmoI CTYRAG 3 cut(s) 662, 998, 1172
SphI GCATGC 1 cut(s) 216
Sse9I AATT 6 cut(s) 135, 142, 435, 441, 1151, 1536
SsiI CCGC 5 cut(s) 284, 341, 345, 667, 1049
SspMI CTAG 1 cut(s) 524
StyD4I CCNGG 3 cut(s) 256, 1370, 1491
StyI CCWWGG 5 cut(s) 171, 195, 387, 887, 984
TaaI ACNGT 7 cut(s) 184, 684, 741, 776, 1140, 1332, 1509
TaqI TCGA 3 cut(s) 234, 289, 925
TasI AATT 6 cut(s) 135, 142, 435, 441, 1151, 1536
TatI WGTACW 5 cut(s) 948, 1140, 1332, 1458, 1509
TauI GCSGC 2 cut(s) 344, 347
TfiI GAWTC 3 cut(s) 922, 980, 1464
Tru1I TTAA 5 cut(s) 483, 519, 642, 759, 999
Tru9I TTAA 5 cut(s) 483, 519, 642, 759, 999
TscAI CASTG 2 cut(s) 746, 758
TseFI GTSAC 3 cut(s) 94, 611, 907
TseI GCWGC 2 cut(s) 650, 1311
Tsp45I GTSAC 3 cut(s) 94, 611, 907
TspDTI ATGAA 4 cut(s) 17, 141, 888, 950
TspGWI ACGGA 1 cut(s) 833
TspRI CASTG 2 cut(s) 746, 758
Vha464I CTTAAG 1 cut(s) 998
VneI GTGCAC 1 cut(s) 1269
VpaK11BI GGWCC 1 cut(s) 602
VspI ATTAAT 2 cut(s) 519, 759
XapI RAATTY 2 cut(s) 142, 1536
XbaI TCTAGA 1 cut(s) 523
XceI RCATGY 4 cut(s) 216, 1339, 1356, 1516
XcmI CCANNNNNNNNNTGG 1 cut(s) 894
XspI CTAG 1 cut(s) 524
Zsp2I ATGCAT 1 cut(s) 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.