Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0004290

Physical Location & Seq

Genomic Coordinates Reverse (-)

40951874 .. 40957986

Gene Structure 6113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00419500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGAAGGAAAAGATTGGATTTTTAGTGGTTGTTTGGTTTTTGCTATGTGGGTTTTGTGTGGGGAGGTTTGTGGTGGAGAAGAACAGCTTGAAAGTGACTTCCCCAAACTCATTGAAGAATGTTTATGAATGTGCAATTGGGAATTTTGGGGTTCCTCAGTATGGAGGAACCTTGGTTGGGACTGTGTATTATCCCAAGGCTAATCAAAAAGCATGCAAGAGTTTTGAAGATTTCGATATCTCATTCAAATCAAAGCCTGGTGGATTACCTACCTTTCTTCTTGCGGATCGAGGAGATTGTTACTTCACTTTGAAGGCTTGGAATGCACAAAATGGTGGAGCGGCTGCTATTCTTGTTGCAGATGACAGAACTGAACCATTGATTACCATGGACACGCCTGAGGAAGAAAAGGAAGATGCTGATTATCTGCAGAAAATTGCAATTCCCTCGGCCCTTATCAGCAAATCTTTGGGGGATAGCATTAAAAAAGCTCTATCTGATGGGGAGATGGTCAACATTAATCTAGACTGGACAGAGGCTCTTCCACATCCTGACGAGCGTGTTGAGTATGAGCTCTGGACAAACAGCAATGATGAGTGTGGACCAAAGTGTGACAGCCAGATTGATTTTGTGAAGAACTTTAAAGGAGCTGCTCAGGTACTTGAGCGGAAGGGGTACACACAGTTTACTCCACACTATATCACTTGGTACTGCCCAGAAGCTTTTGTTTTGAGCAAACAGTGCAAGGCTCAGTGCATTAATCATGGGAGGTACTGTGCTCCAGATCCCGAACAGGATTTTAGTAAAGGTTATGATGGGAAAGATGTTGTGGTTCAAAATCTCCGTCAGGCTTGCTTCTATAAAGTGGCCAATGAAAGTGGAAGGCCATGGCTTTGGTGGGACTATGTGACTGACTTTGCGATTCGATGCCCAATGAAAGAGAAAAAGTACACTTCTGAGTGTGCAAATCAAGTTATTGAATCCTTGGGTGTTGATCTTAAGAAGATACAGAAATGTATTGGGGATCCTGAGGCAAATGAGGAGAATGCGGTTCTAAAGGCTGAACAGGATGCACAGATTGGCAAGGGCTCCCGTGGAGATGTTACCATATTGCCAACTCTTATTATAAACAACAGACAGTACAGAGGAAAACTGGCCAAAGGAGCTGTTCTCAAGGCCATCTGTGCTGGTTTTCAAGAAACTACTGAGCCTGCTGTGTGTTTGAGTGAAGAAGTGGAAACCAATGAATGCCTGGAAAACAATGGAGGTTGCTGGCAGGATAAAGCTTCTAACTTAACTGCATGCAGGGATACATTCCGGGGAAGAGTGTGTGAATGCCCTACTGTGCAAGGCGTGAAGTTTTTGGGTGATGGATATACTCGCTGTGAAGCAGCTTCCGGAGCGTTACGATGTGAAATCAACAACGGAGGTTGTTGGAGGGAAACTCGAAATGGCCACACTTACTCTGCATGTCGTGATGACCATACAAAAGGTTGCACGTGCCCGCCAGGATTCAAGGGTGATGGAGTGAAAACATGTGAAGATGTTGATGAGTGTGAGGAAAAAGTGGTTTGCCAATGTGCACAATGTAAATGCAAGGATACTTGGGGCAGTTACGAGTGCAGCTGTGGTGGTGGTTTACTGTACATGCGAGAGCATGATGCATGTATAAGTCAAAATGCCAGGAATACAGAGTATAGCTGGAGCTTCATTTGGGTTATCATTCTATGCTTGGGTGCTGTTGGAGTTGGAGGATATGCAGTTTACAAGTACAGAATCCGAAGATATATGGACTCAGAGATCCGGGCAATCATGGCACAGTACATGCCATTGGATAATCAAGGAGAAATTCCCAATCATGTCTCCCGTGGTGATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005048 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006892 GO:0006896 GO:0007034 GO:0008104 GO:0008150 GO:0009940 GO:0010008 GO:0010209 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0030135 GO:0030136 GO:0030659 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098791 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA cEGF

Protein Analysis

626

Amino Acids

69.74

Weight (kDa)

5.33

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	60 - 161	9.3e-13	PA domain
VSR_TRX	PF25011	188 - 395	3.2e-105	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	499 - 518	3.3e-07	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30290 AT2G30290
fragaria_vesca	FvH4_6g09810 FvH4_6g09810 FvH4_6g09810
malus_domestica	MD04G1175100.v1.1 MD12G1188800.v1.1
prunus_persica	Prupe.6G294400_v2.0.a1 Prupe.6G294400_v2.0.a1
pyrus_communis	pycom04g15450 pycom12g17630
rosa_chinensis	RchiOBHm_Chr3g0460421 RchiOBHm_Chr6g0252231
rosa_laevigata	RLG00000025013
rosa_multiflora	Rmu_co8220956.1_g000001 Rmu_co8306627.1_g000001 Rmu_sc0004267.1_g000012 Rmu_sc0006252.1_g000025 Rmu_sc0009799.1_g000013 Rmu_sc0021028.1_g000001 Rmu_sc0025932.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419500 Rroxscaffold_7G00216220
rosa_rugosa	Rorug03G0042500
rosa_samantha	Rh3AG100500 Rh3BG104500 Rh3CG106300 Rh3DG105800 Rh6AG020100 Rh6BG015600
rosa_wichuraiana	Rw3G008550 Rw6G001650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1127
AccBSI	CCGCTC	2 cut(s)	341, 667
AccIII	TCCGGA	1 cut(s)	1397
AciI	CCGC	5 cut(s)	284, 341, 667, 1049, 1505
AclWI	GGATC	5 cut(s)	294, 779, 1019, 1032, 1795
AcoI	YGGCCR	3 cut(s)	867, 1155, 1453
AcsI	RAATTY	2 cut(s)	142, 1848
AcvI	CACGTG	1 cut(s)	1500
AfaI	GTAC	9 cut(s)	660, 677, 710, 773, 950, 1142, 1646, 1772, 1823
AfiI	CCNNNNNNNGG	2 cut(s)	161, 177
AflII	CTTAAG	1 cut(s)	998
AflIII	ACRYGT	1 cut(s)	1535
AgsI	TTSAA	9 cut(s)	91, 115, 227, 247, 313, 836, 980, 1196, 1516
AjnI	CCWGG	4 cut(s)	256, 1251, 1507, 1682
AjuI	GAANNNNNNNTTGG	2 cut(s)	120, 152
Alw21I	GWGCWC	3 cut(s)	576, 781, 1585
Alw26I	GTCTC	1 cut(s)	1867
Alw44I	GTGCAC	1 cut(s)	1581
AlwI	GGATC	5 cut(s)	294, 779, 1019, 1032, 1795
Aor13HI	TCCGGA	1 cut(s)	1397
AoxI	GGCC	6 cut(s)	450, 867, 884, 1155, 1176, 1453
ApaLI	GTGCAC	1 cut(s)	1581
ApeKI	GCWGC	4 cut(s)	344, 650, 1391, 1623
ApoI	RAATTY	2 cut(s)	142, 1848
ArsI	GACNNNNNNTTYG	2 cut(s)	829, 861
AseI	ATTAAT	2 cut(s)	519, 759
AspS9I	GGNCC	2 cut(s)	451, 602
AsuC2I	CCSGG	2 cut(s)	1319, 1805
AsuHPI	GGTGA	2 cut(s)	1379, 1532
AvaII	GGWCC	1 cut(s)	602
AxyI	CCTNAGG	2 cut(s)	399, 1029
BaeGI	GKGCMC	2 cut(s)	1505, 1585
BalI	TGGCCA	3 cut(s)	869, 1157, 1455
BamHI	GGATCC	1 cut(s)	1024
BanII	GRGCYC	2 cut(s)	576, 1091
BbrPI	CACGTG	1 cut(s)	1500
Bbv12I	GWGCWC	3 cut(s)	576, 781, 1585
BbvI	GCAGC	4 cut(s)	331, 637, 1403, 1635
BccI	CCATC	6 cut(s)	494, 502, 809, 1187, 1364, 1517
BcgI	CGANNNNNNTGC	2 cut(s)	429, 463
BciT130I	CCWGG	4 cut(s)	258, 1253, 1509, 1684
BciVI	GTATCC	2 cut(s)	1303, 1594
BcnI	CCSGG	2 cut(s)	1319, 1805
BcoDI	GTCTC	1 cut(s)	1867
BfaI	CTAG	1 cut(s)	524
BfmI	CTRYAG	1 cut(s)	428
BfrI	CTTAAG	1 cut(s)	998
BfuI	GTATCC	2 cut(s)	1303, 1594
BisI	GCNGC	5 cut(s)	342, 345, 651, 1392, 1624
BlsI	GCNGC	5 cut(s)	343, 346, 652, 1393, 1625
Bme1390I	CCNGG	6 cut(s)	258, 1253, 1319, 1509, 1684, 1805
Bme18I	GGWCC	1 cut(s)	602
BmgT120I	GGNCC	2 cut(s)	451, 602
BmiI	GGNNCC	4 cut(s)	153, 169, 1026, 1090
BmrFI	CCNGG	6 cut(s)	258, 1253, 1319, 1509, 1684, 1805
BmsI	GCATC	4 cut(s)	406, 917, 1060, 1651
BplI	GAGNNNNNCTC	4 cut(s)	1155, 1187, 1429, 1461
BpmI	CTGGAG	2 cut(s)	765, 1723
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	2 cut(s)	683, 1157
BpuMI	CCSGG	2 cut(s)	1319, 1805
BsaAI	YACGTR	1 cut(s)	1500
BsaJI	CCNNGG	9 cut(s)	171, 195, 387, 447, 887, 984, 1093, 1318, 1867
BsaWI	WCCGGW	1 cut(s)	1397
BsaXI	ACNNNNNCTCC	2 cut(s)	760, 790
Bsc4I	CCNNNNNNNGG	2 cut(s)	161, 177
Bse1I	ACTGG	2 cut(s)	533, 1158
Bse21I	CCTNAGG	2 cut(s)	399, 1029
Bse3DI	GCAATG	1 cut(s)	595
BseAI	TCCGGA	1 cut(s)	1397
BseBI	CCWGG	4 cut(s)	258, 1253, 1509, 1684
BseDI	CCNNGG	9 cut(s)	171, 195, 387, 447, 887, 984, 1093, 1318, 1867
BseGI	GGATG	2 cut(s)	547, 1075
BseLI	CCNNNNNNNGG	2 cut(s)	161, 177
BseMI	GCAATG	1 cut(s)	595
BseMII	CTCAG	8 cut(s)	170, 390, 668, 764, 948, 1020, 1197, 1809
BseNI	ACTGG	2 cut(s)	533, 1158
BseRI	GAGGAG	2 cut(s)	306, 1055
BseSI	GKGCMC	2 cut(s)	1505, 1585
BseXI	GCAGC	4 cut(s)	331, 637, 1403, 1635
BsgI	GTGCAG	1 cut(s)	1642
BshFI	GGCC	6 cut(s)	452, 869, 886, 1157, 1178, 1455
BsiHKAI	GWGCWC	3 cut(s)	576, 781, 1585
BsiSI	CCGG	3 cut(s)	1318, 1398, 1804
BslFI	GGGAC	2 cut(s)	193, 914
BslI	CCNNNNNNNGG	2 cut(s)	161, 177
BsmAI	GTCTC	1 cut(s)	1867
BsmFI	GGGAC	2 cut(s)	193, 914
BsmI	GAATGC	4 cut(s)	328, 1051, 1253, 1340
BsnI	GGCC	6 cut(s)	452, 869, 886, 1157, 1178, 1455
Bsp1286I	GDGCHC	5 cut(s)	576, 781, 1091, 1505, 1585
Bsp13I	TCCGGA	1 cut(s)	1397
Bsp1407I	TGTACA	1 cut(s)	1644
Bsp143I	GATC	5 cut(s)	286, 784, 994, 1024, 1800
Bsp19I	CCATGG	2 cut(s)	387, 887
BspACI	CCGC	5 cut(s)	284, 341, 667, 1049, 1505
BspANI	GGCC	6 cut(s)	452, 869, 886, 1157, 1178, 1455
BspCNI	CTCAG	8 cut(s)	169, 391, 667, 763, 949, 1021, 1198, 1808
BspEI	TCCGGA	1 cut(s)	1397
BspLI	GGNNCC	4 cut(s)	153, 169, 1026, 1090
BspMAI	CTGCAG	1 cut(s)	432
BspPI	GGATC	5 cut(s)	294, 779, 1019, 1032, 1795
BspQI	GCTCTTC	1 cut(s)	546
BspTI	CTTAAG	1 cut(s)	998
BsrBI	CCGCTC	2 cut(s)	341, 667
BsrDI	GCAATG	1 cut(s)	595
BsrGI	TGTACA	1 cut(s)	1644
BsrI	ACTGG	2 cut(s)	533, 1158
BssECI	CCNNGG	9 cut(s)	171, 195, 387, 447, 887, 984, 1093, 1318, 1867
BssMI	GATC	5 cut(s)	286, 784, 994, 1024, 1800
BssT1I	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
Bst2UI	CCWGG	4 cut(s)	258, 1253, 1509, 1684
Bst4CI	ACNGT	8 cut(s)	184, 684, 741, 776, 1140, 1345, 1644, 1821
Bst6I	CTCTTC	2 cut(s)	546, 1318
BstAFI	CTTAAG	1 cut(s)	998
BstAPI	GCANNNNNTGC	1 cut(s)	741
BstAUI	TGTACA	1 cut(s)	1644
BstBAI	YACGTR	1 cut(s)	1500
BstC8I	GCNNGC	6 cut(s)	214, 853, 1212, 1274, 1303, 1505
BstDEI	CTNAG	8 cut(s)	156, 399, 654, 750, 957, 1029, 1206, 1795
BstDSI	CCRYGG	4 cut(s)	387, 887, 1093, 1867
BstF5I	GGATG	2 cut(s)	547, 1075
BstKTI	GATC	5 cut(s)	289, 787, 997, 1027, 1803
BstMAI	GTCTC	1 cut(s)	1867
BstMBI	GATC	5 cut(s)	286, 784, 994, 1024, 1800
BstMWI	GCNNNNNNNGC	6 cut(s)	323, 741, 1163, 1184, 1400, 1814
BstNI	CCWGG	4 cut(s)	258, 1253, 1509, 1684
BstNSI	RCATGY	7 cut(s)	216, 1305, 1473, 1539, 1651, 1668, 1828
BstSCI	CCNGG	6 cut(s)	256, 1251, 1317, 1507, 1682, 1803
BstSFI	CTRYAG	1 cut(s)	428
BstSLI	GKGCMC	2 cut(s)	1505, 1585
BstV1I	GCAGC	4 cut(s)	331, 637, 1403, 1635
BstX2I	RGATCY	3 cut(s)	784, 1024, 1800
BstXI	CCANNNNNNTGG	1 cut(s)	894
BstYI	RGATCY	3 cut(s)	784, 1024, 1800
Bsu36I	CCTNAGG	2 cut(s)	399, 1029
BsuI	GTATCC	2 cut(s)	1303, 1594
BsuRI	GGCC	6 cut(s)	452, 869, 886, 1157, 1178, 1455
BtgI	CCRYGG	4 cut(s)	387, 887, 1093, 1867
BtsCI	GGATG	2 cut(s)	547, 1075
BtsIMutI	CAGTG	2 cut(s)	746, 758
Cac8I	GCNNGC	6 cut(s)	214, 853, 1212, 1274, 1303, 1505
Cfr13I	GGNCC	2 cut(s)	451, 602
Csp6I	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1645, 1771, 1822
CspCI	CAANNNNNGTGG	2 cut(s)	859, 894
CviQI	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1645, 1771, 1822
DdeI	CTNAG	8 cut(s)	156, 399, 654, 750, 957, 1029, 1206, 1795
DpnI	GATC	5 cut(s)	288, 786, 996, 1026, 1802
DpnII	GATC	5 cut(s)	286, 784, 994, 1024, 1800
DraI	TTTAAA	1 cut(s)	643
EaeI	YGGCCR	3 cut(s)	867, 1155, 1453
Eam1104I	CTCTTC	2 cut(s)	546, 1318
EarI	CTCTTC	2 cut(s)	546, 1318
Ecl136II	GAGCTC	1 cut(s)	574
Eco130I	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
Eco24I	GRGCYC	2 cut(s)	576, 1091
Eco32I	GATATC	2 cut(s)	238, 1876
Eco47I	GGWCC	1 cut(s)	602
Eco53kI	GAGCTC	1 cut(s)	574
Eco72I	CACGTG	1 cut(s)	1500
Eco81I	CCTNAGG	2 cut(s)	399, 1029
EcoICRI	GAGCTC	1 cut(s)	574
EcoRII	CCWGG	4 cut(s)	256, 1251, 1507, 1682
EcoRV	GATATC	2 cut(s)	238, 1876
EcoT14I	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
EcoT22I	ATGCAT	1 cut(s)	1666
EcoT38I	GRGCYC	2 cut(s)	576, 1091
ErhI	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
FalI	AAGNNNNNCTT	2 cut(s)	71, 103
FaqI	GGGAC	2 cut(s)	193, 914
FauI	CCCGC	1 cut(s)	1512
Fnu4HI	GCNGC	5 cut(s)	342, 345, 651, 1392, 1624
FokI	GGATG	2 cut(s)	534, 1082
FriOI	GRGCYC	2 cut(s)	576, 1091
Fsp4HI	GCNGC	5 cut(s)	342, 345, 651, 1392, 1624
FspBI	CTAG	1 cut(s)	524
GluI	GCNGC	5 cut(s)	342, 345, 651, 1392, 1624
GsuI	CTGGAG	2 cut(s)	765, 1723
HaeIII	GGCC	6 cut(s)	452, 869, 886, 1157, 1178, 1455
HapII	CCGG	3 cut(s)	1318, 1398, 1804
HincII	GTYRAC	1 cut(s)	514
HindII	GTYRAC	1 cut(s)	514
HindIII	AAGCTT	2 cut(s)	720, 1284
HinfI	GANTC	5 cut(s)	922, 980, 1512, 1776, 1793
HpaII	CCGG	3 cut(s)	1318, 1398, 1804
HphI	GGTGA	2 cut(s)	1379, 1532
Hpy166II	GTNNAC	8 cut(s)	514, 602, 678, 687, 951, 1583, 1640, 1765
Hpy188I	TCNGA	5 cut(s)	499, 958, 1781, 1798, 1880
Hpy188III	TCNNGA	9 cut(s)	524, 551, 577, 782, 788, 1028, 1196, 1398, 1475
Hpy8I	GTNNAC	8 cut(s)	514, 602, 678, 687, 951, 1583, 1640, 1765
HpyAV	CCTTC	3 cut(s)	307, 664, 876
HpyCH4III	ACNGT	8 cut(s)	184, 684, 741, 776, 1140, 1345, 1644, 1821
HpyCH4IV	ACGT	1 cut(s)	1499
HpyF10VI	GCNNNNNNNGC	6 cut(s)	323, 741, 1163, 1184, 1400, 1814
HpyF3I	CTNAG	8 cut(s)	156, 399, 654, 750, 957, 1029, 1206, 1795
HpySE526I	ACGT	1 cut(s)	1499
Kpn2I	TCCGGA	1 cut(s)	1397
Kzo9I	GATC	5 cut(s)	286, 784, 994, 1024, 1800
LguI	GCTCTTC	1 cut(s)	546
LmnI	GCTCC	7 cut(s)	338, 647, 784, 1094, 1163, 1400, 1704
Lsp1109I	GCAGC	4 cut(s)	331, 637, 1403, 1635
LweI	GCATC	4 cut(s)	406, 917, 1060, 1651
MaeI	CTAG	1 cut(s)	524
MaeII	ACGT	1 cut(s)	1499
MaeIII	GTNAC	7 cut(s)	94, 299, 611, 907, 1102, 1404, 1613
MalI	GATC	5 cut(s)	288, 786, 996, 1026, 1802
MbiI	CCGCTC	2 cut(s)	341, 667
MboI	GATC	5 cut(s)	286, 784, 994, 1024, 1800
MfeI	CAATTG	1 cut(s)	135
MflI	RGATCY	3 cut(s)	784, 1024, 1800
MhlI	GDGCHC	5 cut(s)	576, 781, 1091, 1505, 1585
MlsI	TGGCCA	3 cut(s)	869, 1157, 1455
MluCI	AATT	5 cut(s)	135, 142, 435, 441, 1848
MluNI	TGGCCA	3 cut(s)	869, 1157, 1455
MlyI	GAGTC	1 cut(s)	1787
MmeI	TCCRAC	3 cut(s)	1415, 1723, 1729
Mox20I	TGGCCA	3 cut(s)	869, 1157, 1455
Mph1103I	ATGCAT	1 cut(s)	1666
MroI	TCCGGA	1 cut(s)	1397
MscI	TGGCCA	3 cut(s)	869, 1157, 1455
MseI	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
Msp20I	TGGCCA	3 cut(s)	869, 1157, 1455
MspA1I	CMGCKG	1 cut(s)	1626
MspCI	CTTAAG	1 cut(s)	998
MspI	CCGG	3 cut(s)	1318, 1398, 1804
MspR9I	CCNGG	6 cut(s)	258, 1253, 1319, 1509, 1684, 1805
MunI	CAATTG	1 cut(s)	135
Mva1269I	GAATGC	4 cut(s)	328, 1051, 1253, 1340
MvaI	CCWGG	4 cut(s)	258, 1253, 1509, 1684
MwoI	GCNNNNNNNGC	6 cut(s)	323, 741, 1163, 1184, 1400, 1814
NciI	CCSGG	2 cut(s)	1319, 1805
NcoI	CCATGG	2 cut(s)	387, 887
NdeII	GATC	5 cut(s)	286, 784, 994, 1024, 1800
NlaIV	GGNNCC	4 cut(s)	153, 169, 1026, 1090
NmeAIII	GCCGAG	1 cut(s)	428
NmuCI	GTSAC	3 cut(s)	94, 611, 907
NsiI	ATGCAT	1 cut(s)	1666
NspI	RCATGY	7 cut(s)	216, 1305, 1473, 1539, 1651, 1668, 1828
PaeI	GCATGC	2 cut(s)	216, 1305
PciI	ACATGT	1 cut(s)	1535
PciSI	GCTCTTC	1 cut(s)	546
PctI	GAATGC	4 cut(s)	328, 1051, 1253, 1340
PfeI	GAWTC	4 cut(s)	922, 980, 1512, 1776
PkrI	GCNGC	5 cut(s)	343, 346, 652, 1393, 1625
PleI	GAGTC	1 cut(s)	1787
PmaCI	CACGTG	1 cut(s)	1500
PmlI	CACGTG	1 cut(s)	1500
PpsI	GAGTC	1 cut(s)	1787
Ppu21I	YACGTR	1 cut(s)	1500
PscI	ACATGT	1 cut(s)	1535
PshBI	ATTAAT	2 cut(s)	519, 759
PsiI	TTATAA	1 cut(s)	1127
Psp124BI	GAGCTC	1 cut(s)	576
Psp6I	CCWGG	4 cut(s)	256, 1251, 1507, 1682
PspCI	CACGTG	1 cut(s)	1500
PspGI	CCWGG	4 cut(s)	256, 1251, 1507, 1682
PspN4I	GGNNCC	4 cut(s)	153, 169, 1026, 1090
PspPI	GGNCC	2 cut(s)	451, 602
PstI	CTGCAG	1 cut(s)	432
PsuI	RGATCY	3 cut(s)	784, 1024, 1800
PvuII	CAGCTG	1 cut(s)	1626
RsaI	GTAC	9 cut(s)	660, 677, 710, 773, 950, 1142, 1646, 1772, 1823
RsaNI	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1645, 1771, 1822
SacI	GAGCTC	1 cut(s)	576
SapI	GCTCTTC	1 cut(s)	546
SaqAI	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
SatI	GCNGC	5 cut(s)	342, 345, 651, 1392, 1624
Sau3AI	GATC	5 cut(s)	286, 784, 994, 1024, 1800
Sau96I	GGNCC	2 cut(s)	451, 602
SchI	GAGTC	1 cut(s)	1787
ScrFI	CCNGG	6 cut(s)	258, 1253, 1319, 1509, 1684, 1805
SduI	GDGCHC	5 cut(s)	576, 781, 1091, 1505, 1585
SfaNI	GCATC	4 cut(s)	406, 917, 1060, 1651
SfcI	CTRYAG	1 cut(s)	428
SinI	GGWCC	1 cut(s)	602
SmlI	CTYRAG	3 cut(s)	662, 998, 1172
SmoI	CTYRAG	3 cut(s)	662, 998, 1172
SphI	GCATGC	2 cut(s)	216, 1305
Sse9I	AATT	5 cut(s)	135, 142, 435, 441, 1848
SsiI	CCGC	5 cut(s)	284, 341, 667, 1049, 1505
SspMI	CTAG	1 cut(s)	524
SstI	GAGCTC	1 cut(s)	576
StyD4I	CCNGG	6 cut(s)	256, 1251, 1317, 1507, 1682, 1803
StyI	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
TaaI	ACNGT	8 cut(s)	184, 684, 741, 776, 1140, 1345, 1644, 1821
TaiI	ACGT	1 cut(s)	1502
TaqI	TCGA	4 cut(s)	234, 289, 925, 1447
TasI	AATT	5 cut(s)	135, 142, 435, 441, 1848
TatI	WGTACW	5 cut(s)	948, 1140, 1644, 1770, 1821
TauI	GCSGC	1 cut(s)	344
TfiI	GAWTC	4 cut(s)	922, 980, 1512, 1776
Tru1I	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
Tru9I	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
TscAI	CASTG	2 cut(s)	746, 758
TseFI	GTSAC	3 cut(s)	94, 611, 907
TseI	GCWGC	4 cut(s)	344, 650, 1391, 1623
Tsp45I	GTSAC	3 cut(s)	94, 611, 907
TspDTI	ATGAA	6 cut(s)	17, 141, 888, 950, 1260, 1699
TspGWI	ACGGA	2 cut(s)	833, 1440
TspRI	CASTG	2 cut(s)	746, 758
Vha464I	CTTAAG	1 cut(s)	998
VneI	GTGCAC	1 cut(s)	1581
VpaK11BI	GGWCC	1 cut(s)	602
VspI	ATTAAT	2 cut(s)	519, 759
XapI	RAATTY	2 cut(s)	142, 1848
XbaI	TCTAGA	1 cut(s)	523
XceI	RCATGY	7 cut(s)	216, 1305, 1473, 1539, 1651, 1668, 1828
XcmI	CCANNNNNNNNNTGG	2 cut(s)	894, 1249
XspI	CTAG	1 cut(s)	524
Zsp2I	ATGCAT	1 cut(s)	1666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.