Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004290

Physical Location & Seq

Genomic Coordinates Forward (+)

5847754 .. 5853929

Gene Structure 6176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g09810.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGAAGGAAAAGATTGGATTTTTGGTGTCTGTTTGGTTTTTGCTATGTGGGTTTTGTGTGGGGAGGTTTGTGGTGGAGAAGAACAGCTTGAAAGTGACTTCCCCAAACTCATTGAAGAATGTTTATGAATGTGCTATTGGGAATTTTGGGGTTCCTCAGTATGGAGGGACCTTGGTTGGGACTGTGTTTTATCCCAAGGCTAATCAAAAGGCATGCAAGGGTTTTGAAGATTTCGATATCTCATTCAAATCCAAGCCTGGTGGATTGCCAACCTTTCTTCTGGCCGATCGAGGAGATTGTTACTTCACATTGAAGGCTTGGAATGCACAGAATGGTGGAGCGGCCGCTATTCTTGTTGCAGATGACAGAACTGAACCATTGATTACCATGGACACTCCCGAGGAAGAAAATGCAGATGCTGATTATCTGCAGAAAATTGCAATTCCCTCCGCTCTTATCAGCAAATCTTTGGGGGATAGCATTAAAAAAGCTCTATCTGATGGGGAGATGGTCAACATTAATCTTGACTGGACAGAGGCTCTTCCACATCCTGATGAGCGTGTTGAGTATGAGTTCTGGACAAACAGCAATGATGAGTGTGGACCAAAGTGTGATAGCCAGATTGATTTTGTGAAGAACTTTAAAGGAGCTGCTCAGGTACTTGAGCGGAAGGGGTACACTCAGTTTACTCCACACTATATTACTTGGTACTGCCCAGAAGCTTTTATTTTGAGTAAACAGTGCAAATCTCAGTGCATCAATCATGGGAGGTACTGTGCTCCAGATCCCGAACAGGACTTTAGTAAAGGTTATGACGGGAAAGATGTTGTGGTTCAAAACCTCCGTCAAGCTTGCTTCTATAAAGTGGCCAATGAAAGTGGAAAGCCGTGGCTATGGTGGGACTATGTGACTGACTTTGCAATTCGATGCCCAATGAAAGAGAAGAAGTACACTGACGATTGTGCAAATCAAGTTATTGAATCCTTAGGTGTTGATCTTAAGAAGATACAGACATGTATTGGGGATACTGAGGCAGATGAGGAGAATGCAGTTCTAAAGGCTGAACAGGATGCACAGATTGGCAAGGGCACCCGTGGAGATGTTACCATATTGCCAACTCTTGTTATAAACAGCAGACAGTACAGAGGGAAACTGGCCAAAGGAGCTGTTCTCAAGGCCATCTGTGCTGGTTTTCAAGAAACTACTGAACCGGCTGTGTGTTTGAGTGAAGATGTAGAAACCAACGAGTGCCTGGAAAACAATGGAGGTTGCTGGCAGGATAAAGCTTCTAACTTAACTGCATGCAGGGATACATTCCGTGGAAGAGTCTGCGAATGCCCTACTGTGCAAGGCGTGAAGTTTGTGGGTGATGGTTACACTCACTGTGAAGCTTCCGGAGCGTTACGCTGTGAAATTAACAATGGAGGTTGTTGGAGGAAAACTAAAAATGGCAAGACTTACTCTGCATGTCGTGATGATCATACAAAAGGTTGCACGTGCCCGCCAGGATTCAAGGGTGATGGAGAGAAAACATGTGAAGATGTTGATGAGTGTAAGGAGAAGGTGGCTTGCCAATGTTCACAATGTAAATGCAAGAATACTTGGGGCAGTTACGAGTGCAGCTGTGGTGGTGGTTTGTTGTACATGCGAGAGCATGATGCATGTATAGGTAAAAATGCCAGGAATACAGAGTATAGCTGGAGCTTTATTTGGGTTATCATTCTATGCTTGGGTGCTGTTGGAGTTGGAGGATATGCGGTTTACAAGTACAGAATCCGAAGATACATGGACTCAGAGATCCGGGCAATCATGGCACAGTACATGCCATTGGATAACCAAGGAGAAATTCCCAATCATGTCTCCCGCGGTGATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005048 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006892 GO:0006896 GO:0007034 GO:0008104 GO:0008150 GO:0009940 GO:0010008 GO:0010209 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0030135 GO:0030136 GO:0030659 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098791 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA cEGF

Protein Analysis

626

Amino Acids

69.44

Weight (kDa)

5.44

Isoelectric Point (pI)

32.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	61 - 161	1.4e-12	PA domain
VSR_TRX	PF25011	188 - 395	2.6e-105	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	498 - 517	6.2e-07	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30290 AT2G30290
fragaria_vesca	FvH4_6g09810 FvH4_6g09810 FvH4_6g09810
malus_domestica	MD04G1175100.v1.1 MD12G1188800.v1.1
prunus_persica	Prupe.6G294400_v2.0.a1 Prupe.6G294400_v2.0.a1
pyrus_communis	pycom04g15450 pycom12g17630
rosa_chinensis	RchiOBHm_Chr3g0460421 RchiOBHm_Chr6g0252231
rosa_laevigata	RLG00000025013
rosa_multiflora	Rmu_co8220956.1_g000001 Rmu_co8306627.1_g000001 Rmu_sc0004267.1_g000012 Rmu_sc0006252.1_g000025 Rmu_sc0009799.1_g000013 Rmu_sc0021028.1_g000001 Rmu_sc0025932.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419500 Rroxscaffold_7G00216220
rosa_rugosa	Rorug03G0042500
rosa_samantha	Rh3AG100500 Rh3BG104500 Rh3CG106300 Rh3DG105800 Rh6AG020100 Rh6BG015600
rosa_wichuraiana	Rw3G008550 Rw6G001650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1127
AccB1I	GGYRCC	1 cut(s)	1088
AccBSI	CCGCTC	3 cut(s)	341, 452, 667
AccII	CGCG	1 cut(s)	1866
AccIII	TCCGGA	1 cut(s)	1394
AciI	CCGC	8 cut(s)	341, 345, 450, 667, 1502, 1757, 1864, 1866
AclWI	GGATC	2 cut(s)	779, 1792
AcoI	YGGCCR	4 cut(s)	282, 342, 867, 1155
AcsI	RAATTY	2 cut(s)	142, 1845
AcvI	CACGTG	1 cut(s)	1497
AfaI	GTAC	9 cut(s)	660, 677, 710, 773, 950, 1142, 1643, 1769, 1820
AfiI	CCNNNNNNNGG	2 cut(s)	161, 177
AflII	CTTAAG	1 cut(s)	998
AflIII	ACRYGT	2 cut(s)	1013, 1532
AgsI	TTSAA	9 cut(s)	91, 115, 227, 247, 313, 836, 980, 1196, 1513
AjnI	CCWGG	4 cut(s)	256, 1251, 1504, 1679
AjuI	GAANNNNNNNTTGG	4 cut(s)	120, 152, 1830, 1862
Alw21I	GWGCWC	1 cut(s)	781
Alw26I	GTCTC	1 cut(s)	1864
AlwI	GGATC	2 cut(s)	779, 1792
AlwNI	CAGNNNCTG	1 cut(s)	419
Ama87I	CYCGRG	1 cut(s)	398
Aor13HI	TCCGGA	1 cut(s)	1394
AoxI	GGCC	5 cut(s)	282, 342, 867, 1155, 1176
ApeKI	GCWGC	2 cut(s)	650, 1620
ApoI	RAATTY	2 cut(s)	142, 1845
ArsI	GACNNNNNNTTYG	2 cut(s)	829, 861
AseI	ATTAAT	1 cut(s)	519
AspS9I	GGNCC	2 cut(s)	168, 602
AsuC2I	CCSGG	1 cut(s)	1802
AsuHPI	GGTGA	2 cut(s)	1379, 1529
AvaI	CYCGRG	1 cut(s)	398
AvaII	GGWCC	2 cut(s)	168, 602
AxyI	CCTNAGG	1 cut(s)	985
BaeGI	GKGCMC	2 cut(s)	1091, 1502
BalI	TGGCCA	2 cut(s)	869, 1157
BanI	GGYRCC	1 cut(s)	1088
BbrPI	CACGTG	1 cut(s)	1497
Bbv12I	GWGCWC	1 cut(s)	781
BbvI	GCAGC	2 cut(s)	637, 1632
BccI	CCATC	5 cut(s)	494, 502, 1187, 1364, 1514
BceAI	ACGGC	1 cut(s)	871
BciT130I	CCWGG	4 cut(s)	258, 1253, 1506, 1681
BciVI	GTATCC	2 cut(s)	1018, 1303
BclI	TGATCA	1 cut(s)	1477
BcnI	CCSGG	1 cut(s)	1802
BcoDI	GTCTC	1 cut(s)	1864
BfmI	CTRYAG	1 cut(s)	428
BfrI	CTTAAG	1 cut(s)	998
BfuI	GTATCC	2 cut(s)	1018, 1303
BisI	GCNGC	4 cut(s)	342, 345, 651, 1621
BlsI	GCNGC	4 cut(s)	343, 346, 652, 1622
Bme1390I	CCNGG	5 cut(s)	258, 1253, 1506, 1681, 1802
Bme18I	GGWCC	2 cut(s)	168, 602
BmeT110I	CYCGRG	1 cut(s)	398
BmgT120I	GGNCC	2 cut(s)	168, 602
BmiI	GGNNCC	3 cut(s)	153, 169, 1090
BmrFI	CCNGG	5 cut(s)	258, 1253, 1506, 1681, 1802
BmsI	GCATC	5 cut(s)	406, 765, 917, 1060, 1648
BplI	GAGNNNNNCTC	2 cut(s)	1155, 1187
BpmI	CTGGAG	2 cut(s)	765, 1720
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	2 cut(s)	683, 1157
BpuMI	CCSGG	1 cut(s)	1802
BsaAI	YACGTR	1 cut(s)	1497
BsaJI	CCNNGG	9 cut(s)	171, 195, 387, 399, 887, 1093, 1318, 1837, 1864
BsaWI	WCCGGW	1 cut(s)	1394
BsaXI	ACNNNNNCTCC	2 cut(s)	760, 790
Bsc4I	CCNNNNNNNGG	2 cut(s)	161, 177
Bse118I	RCCGGY	1 cut(s)	1210
Bse1I	ACTGG	2 cut(s)	533, 1158
Bse21I	CCTNAGG	1 cut(s)	985
Bse3DI	GCAATG	1 cut(s)	595
BseAI	TCCGGA	1 cut(s)	1394
BseBI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
BseDI	CCNNGG	9 cut(s)	171, 195, 387, 399, 887, 1093, 1318, 1837, 1864
BseGI	GGATG	2 cut(s)	547, 1075
BseLI	CCNNNNNNNGG	2 cut(s)	161, 177
BseMI	GCAATG	1 cut(s)	595
BseMII	CTCAG	6 cut(s)	170, 668, 695, 764, 1020, 1806
BseNI	ACTGG	2 cut(s)	533, 1158
BseRI	GAGGAG	2 cut(s)	306, 1055
BseSI	GKGCMC	2 cut(s)	1091, 1502
BseX3I	CGGCCG	1 cut(s)	342
BseXI	GCAGC	2 cut(s)	637, 1632
BsgI	GTGCAG	1 cut(s)	1639
Bsh1236I	CGCG	1 cut(s)	1866
Bsh1285I	CGRYCG	2 cut(s)	289, 345
BshFI	GGCC	5 cut(s)	284, 344, 869, 1157, 1178
BshNI	GGYRCC	1 cut(s)	1088
BsiEI	CGRYCG	2 cut(s)	289, 345
BsiHKAI	GWGCWC	1 cut(s)	781
BsiHKCI	CYCGRG	1 cut(s)	398
BsiSI	CCGG	3 cut(s)	1211, 1395, 1801
BslFI	GGGAC	3 cut(s)	181, 193, 914
BslI	CCNNNNNNNGG	2 cut(s)	161, 177
BsmAI	GTCTC	1 cut(s)	1864
BsmFI	GGGAC	3 cut(s)	181, 193, 914
BsmI	GAATGC	3 cut(s)	328, 1051, 1340
BsnI	GGCC	5 cut(s)	284, 344, 869, 1157, 1178
BsoBI	CYCGRG	1 cut(s)	398
Bsp1286I	GDGCHC	3 cut(s)	781, 1091, 1502
Bsp13I	TCCGGA	1 cut(s)	1394
Bsp1407I	TGTACA	1 cut(s)	1641
Bsp143I	GATC	5 cut(s)	286, 784, 994, 1477, 1797
Bsp19I	CCATGG	1 cut(s)	387
BspACI	CCGC	8 cut(s)	341, 345, 450, 667, 1502, 1757, 1864, 1866
BspANI	GGCC	5 cut(s)	284, 344, 869, 1157, 1178
BspCNI	CTCAG	6 cut(s)	169, 667, 694, 763, 1021, 1805
BspEI	TCCGGA	1 cut(s)	1394
BspFNI	CGCG	1 cut(s)	1866
BspLI	GGNNCC	3 cut(s)	153, 169, 1090
BspMAI	CTGCAG	1 cut(s)	432
BspPI	GGATC	2 cut(s)	779, 1792
BspQI	GCTCTTC	1 cut(s)	546
BspT107I	GGYRCC	1 cut(s)	1088
BspTI	CTTAAG	1 cut(s)	998
BsrBI	CCGCTC	3 cut(s)	341, 452, 667
BsrDI	GCAATG	1 cut(s)	595
BsrFI	RCCGGY	1 cut(s)	1210
BsrGI	TGTACA	1 cut(s)	1641
BsrI	ACTGG	2 cut(s)	533, 1158
BssAI	RCCGGY	1 cut(s)	1210
BssECI	CCNNGG	9 cut(s)	171, 195, 387, 399, 887, 1093, 1318, 1837, 1864
BssMI	GATC	5 cut(s)	286, 784, 994, 1477, 1797
BssT1I	CCWWGG	4 cut(s)	171, 195, 387, 1837
Bst2UI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
Bst4CI	ACNGT	7 cut(s)	184, 741, 776, 1140, 1345, 1385, 1818
Bst6I	CTCTTC	2 cut(s)	546, 1318
BstAFI	CTTAAG	1 cut(s)	998
BstAUI	TGTACA	1 cut(s)	1641
BstBAI	YACGTR	1 cut(s)	1497
BstC8I	GCNNGC	6 cut(s)	214, 853, 1274, 1303, 1502, 1570
BstDEI	CTNAG	7 cut(s)	156, 654, 681, 750, 985, 1029, 1792
BstDSI	CCRYGG	5 cut(s)	387, 887, 1093, 1318, 1864
BstF5I	GGATG	2 cut(s)	547, 1075
BstFNI	CGCG	1 cut(s)	1866
BstKTI	GATC	5 cut(s)	289, 787, 997, 1480, 1800
BstMAI	GTCTC	1 cut(s)	1864
BstMBI	GATC	5 cut(s)	286, 784, 994, 1477, 1797
BstMCI	CGRYCG	2 cut(s)	289, 345
BstMWI	GCNNNNNNNGC	5 cut(s)	323, 1163, 1184, 1397, 1811
BstNI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
BstNSI	RCATGY	8 cut(s)	216, 1017, 1305, 1470, 1536, 1648, 1665, 1825
BstSCI	CCNGG	5 cut(s)	256, 1251, 1504, 1679, 1800
BstSFI	CTRYAG	1 cut(s)	428
BstSLI	GKGCMC	2 cut(s)	1091, 1502
BstUI	CGCG	1 cut(s)	1866
BstV1I	GCAGC	2 cut(s)	637, 1632
BstX2I	RGATCY	2 cut(s)	784, 1797
BstYI	RGATCY	2 cut(s)	784, 1797
BstZI	CGGCCG	1 cut(s)	342
Bsu36I	CCTNAGG	1 cut(s)	985
BsuI	GTATCC	2 cut(s)	1018, 1303
BsuRI	GGCC	5 cut(s)	284, 344, 869, 1157, 1178
BtgI	CCRYGG	5 cut(s)	387, 887, 1093, 1318, 1864
BtsCI	GGATG	2 cut(s)	547, 1075
BtsIMutI	CAGTG	4 cut(s)	746, 758, 951, 1381
Cac8I	GCNNGC	6 cut(s)	214, 853, 1274, 1303, 1502, 1570
CaiI	CAGNNNCTG	1 cut(s)	419
CciNI	GCGGCCGC	1 cut(s)	342
Cfr10I	RCCGGY	1 cut(s)	1210
Cfr13I	GGNCC	2 cut(s)	168, 602
Cfr42I	CCGCGG	1 cut(s)	1867
Csp6I	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1642, 1768, 1819
CspCI	CAANNNNNGTGG	4 cut(s)	241, 276, 859, 894
CviQI	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1642, 1768, 1819
DdeI	CTNAG	7 cut(s)	156, 654, 681, 750, 985, 1029, 1792
DpnI	GATC	5 cut(s)	288, 786, 996, 1479, 1799
DpnII	GATC	5 cut(s)	286, 784, 994, 1477, 1797
DraI	TTTAAA	1 cut(s)	643
EaeI	YGGCCR	4 cut(s)	282, 342, 867, 1155
EagI	CGGCCG	1 cut(s)	342
Eam1104I	CTCTTC	2 cut(s)	546, 1318
EarI	CTCTTC	2 cut(s)	546, 1318
EclXI	CGGCCG	1 cut(s)	342
Eco130I	CCWWGG	4 cut(s)	171, 195, 387, 1837
Eco32I	GATATC	2 cut(s)	238, 1873
Eco47I	GGWCC	2 cut(s)	168, 602
Eco52I	CGGCCG	1 cut(s)	342
Eco72I	CACGTG	1 cut(s)	1497
Eco81I	CCTNAGG	1 cut(s)	985
Eco88I	CYCGRG	1 cut(s)	398
EcoO109I	RGGNCCY	1 cut(s)	168
EcoRII	CCWGG	4 cut(s)	256, 1251, 1504, 1679
EcoRV	GATATC	2 cut(s)	238, 1873
EcoT14I	CCWWGG	4 cut(s)	171, 195, 387, 1837
EcoT22I	ATGCAT	1 cut(s)	1663
ErhI	CCWWGG	4 cut(s)	171, 195, 387, 1837
FalI	AAGNNNNNCTT	2 cut(s)	71, 103
FaqI	GGGAC	3 cut(s)	181, 193, 914
FauI	CCCGC	2 cut(s)	1509, 1871
FbaI	TGATCA	1 cut(s)	1477
Fnu4HI	GCNGC	4 cut(s)	342, 345, 651, 1621
FokI	GGATG	2 cut(s)	534, 1082
Fsp4HI	GCNGC	4 cut(s)	342, 345, 651, 1621
GluI	GCNGC	4 cut(s)	342, 345, 651, 1621
GsuI	CTGGAG	2 cut(s)	765, 1720
HaeIII	GGCC	5 cut(s)	284, 344, 869, 1157, 1178
HapII	CCGG	3 cut(s)	1211, 1395, 1801
HincII	GTYRAC	1 cut(s)	514
HindII	GTYRAC	1 cut(s)	514
HindIII	AAGCTT	4 cut(s)	720, 849, 1284, 1389
HinfI	GANTC	5 cut(s)	980, 1326, 1509, 1773, 1790
HpaII	CCGG	3 cut(s)	1211, 1395, 1801
HphI	GGTGA	2 cut(s)	1379, 1529
Hpy166II	GTNNAC	8 cut(s)	514, 602, 678, 687, 737, 951, 1580, 1762
Hpy188I	TCNGA	4 cut(s)	499, 1778, 1795, 1877
Hpy188III	TCNNGA	9 cut(s)	398, 524, 551, 577, 782, 788, 1196, 1395, 1472
Hpy8I	GTNNAC	8 cut(s)	514, 602, 678, 687, 737, 951, 1580, 1762
HpyAV	CCTTC	3 cut(s)	307, 664, 1555
HpyCH4III	ACNGT	7 cut(s)	184, 741, 776, 1140, 1345, 1385, 1818
HpyCH4IV	ACGT	1 cut(s)	1496
HpyF10VI	GCNNNNNNNGC	5 cut(s)	323, 1163, 1184, 1397, 1811
HpyF3I	CTNAG	7 cut(s)	156, 654, 681, 750, 985, 1029, 1792
HpySE526I	ACGT	1 cut(s)	1496
Kpn2I	TCCGGA	1 cut(s)	1394
Ksp22I	TGATCA	1 cut(s)	1477
KspI	CCGCGG	1 cut(s)	1867
Kzo9I	GATC	5 cut(s)	286, 784, 994, 1477, 1797
LguI	GCTCTTC	1 cut(s)	546
LmnI	GCTCC	6 cut(s)	338, 647, 784, 1163, 1397, 1701
Lsp1109I	GCAGC	2 cut(s)	637, 1632
LweI	GCATC	5 cut(s)	406, 765, 917, 1060, 1648
MaeII	ACGT	1 cut(s)	1496
MaeIII	GTNAC	7 cut(s)	94, 299, 907, 1102, 1373, 1401, 1610
MalI	GATC	5 cut(s)	288, 786, 996, 1479, 1799
MbiI	CCGCTC	3 cut(s)	341, 452, 667
MboI	GATC	5 cut(s)	286, 784, 994, 1477, 1797
MflI	RGATCY	2 cut(s)	784, 1797
MhlI	GDGCHC	3 cut(s)	781, 1091, 1502
MlsI	TGGCCA	2 cut(s)	869, 1157
MluCI	AATT	6 cut(s)	142, 435, 441, 921, 1413, 1845
MluNI	TGGCCA	2 cut(s)	869, 1157
MlyI	GAGTC	2 cut(s)	1335, 1784
MmeI	TCCRAC	3 cut(s)	1412, 1720, 1726
Mox20I	TGGCCA	2 cut(s)	869, 1157
Mph1103I	ATGCAT	1 cut(s)	1663
MroI	TCCGGA	1 cut(s)	1394
MscI	TGGCCA	2 cut(s)	869, 1157
MseI	TTAA	6 cut(s)	483, 519, 642, 999, 1295, 1416
MslI	CAYNNNNRTG	1 cut(s)	552
Msp20I	TGGCCA	2 cut(s)	869, 1157
MspA1I	CMGCKG	2 cut(s)	1623, 1866
MspCI	CTTAAG	1 cut(s)	998
MspI	CCGG	3 cut(s)	1211, 1395, 1801
MspR9I	CCNGG	5 cut(s)	258, 1253, 1506, 1681, 1802
Mva1269I	GAATGC	3 cut(s)	328, 1051, 1340
MvaI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
MvnI	CGCG	1 cut(s)	1866
MwoI	GCNNNNNNNGC	5 cut(s)	323, 1163, 1184, 1397, 1811
NciI	CCSGG	1 cut(s)	1802
NcoI	CCATGG	1 cut(s)	387
NdeII	GATC	5 cut(s)	286, 784, 994, 1477, 1797
NlaIV	GGNNCC	3 cut(s)	153, 169, 1090
NmuCI	GTSAC	2 cut(s)	94, 907
NotI	GCGGCCGC	1 cut(s)	342
NsiI	ATGCAT	1 cut(s)	1663
NspI	RCATGY	8 cut(s)	216, 1017, 1305, 1470, 1536, 1648, 1665, 1825
PaeI	GCATGC	2 cut(s)	216, 1305
PciI	ACATGT	2 cut(s)	1013, 1532
PciSI	GCTCTTC	1 cut(s)	546
PctI	GAATGC	3 cut(s)	328, 1051, 1340
PfeI	GAWTC	3 cut(s)	980, 1509, 1773
PkrI	GCNGC	4 cut(s)	343, 346, 652, 1622
Ple19I	CGATCG	1 cut(s)	289
PleI	GAGTC	2 cut(s)	1334, 1784
PmaCI	CACGTG	1 cut(s)	1497
PmlI	CACGTG	1 cut(s)	1497
PpsI	GAGTC	2 cut(s)	1334, 1784
Ppu21I	YACGTR	1 cut(s)	1497
PpuMI	RGGWCCY	1 cut(s)	168
PscI	ACATGT	2 cut(s)	1013, 1532
PshBI	ATTAAT	1 cut(s)	519
PsiI	TTATAA	1 cut(s)	1127
Psp5II	RGGWCCY	1 cut(s)	168
Psp6I	CCWGG	4 cut(s)	256, 1251, 1504, 1679
PspCI	CACGTG	1 cut(s)	1497
PspGI	CCWGG	4 cut(s)	256, 1251, 1504, 1679
PspN4I	GGNNCC	3 cut(s)	153, 169, 1090
PspPI	GGNCC	2 cut(s)	168, 602
PspPPI	RGGWCCY	1 cut(s)	168
PstI	CTGCAG	1 cut(s)	432
PstNI	CAGNNNCTG	1 cut(s)	419
PsuI	RGATCY	2 cut(s)	784, 1797
PvuI	CGATCG	1 cut(s)	289
PvuII	CAGCTG	1 cut(s)	1623
RsaI	GTAC	9 cut(s)	660, 677, 710, 773, 950, 1142, 1643, 1769, 1820
RsaNI	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1642, 1768, 1819
RseI	CAYNNNNRTG	1 cut(s)	552
SacII	CCGCGG	1 cut(s)	1867
SapI	GCTCTTC	1 cut(s)	546
SaqAI	TTAA	6 cut(s)	483, 519, 642, 999, 1295, 1416
SatI	GCNGC	4 cut(s)	342, 345, 651, 1621
Sau3AI	GATC	5 cut(s)	286, 784, 994, 1477, 1797
Sau96I	GGNCC	2 cut(s)	168, 602
SchI	GAGTC	2 cut(s)	1335, 1784
ScrFI	CCNGG	5 cut(s)	258, 1253, 1506, 1681, 1802
SduI	GDGCHC	3 cut(s)	781, 1091, 1502
SfaNI	GCATC	5 cut(s)	406, 765, 917, 1060, 1648
SfcI	CTRYAG	1 cut(s)	428
Sfr303I	CCGCGG	1 cut(s)	1867
SgrBI	CCGCGG	1 cut(s)	1867
SinI	GGWCC	2 cut(s)	168, 602
SmiMI	CAYNNNNRTG	1 cut(s)	552
SmlI	CTYRAG	3 cut(s)	662, 998, 1172
SmoI	CTYRAG	3 cut(s)	662, 998, 1172
SphI	GCATGC	2 cut(s)	216, 1305
Sse9I	AATT	6 cut(s)	142, 435, 441, 921, 1413, 1845
SsiI	CCGC	8 cut(s)	341, 345, 450, 667, 1502, 1757, 1864, 1866
StyD4I	CCNGG	5 cut(s)	256, 1251, 1504, 1679, 1800
StyI	CCWWGG	4 cut(s)	171, 195, 387, 1837
TaaI	ACNGT	7 cut(s)	184, 741, 776, 1140, 1345, 1385, 1818
TaiI	ACGT	1 cut(s)	1499
TaqI	TCGA	3 cut(s)	234, 289, 925
TasI	AATT	6 cut(s)	142, 435, 441, 921, 1413, 1845
TatI	WGTACW	5 cut(s)	948, 1140, 1641, 1767, 1818
TauI	GCSGC	2 cut(s)	344, 347
TfiI	GAWTC	3 cut(s)	980, 1509, 1773
Tru1I	TTAA	6 cut(s)	483, 519, 642, 999, 1295, 1416
Tru9I	TTAA	6 cut(s)	483, 519, 642, 999, 1295, 1416
TscAI	CASTG	4 cut(s)	746, 758, 958, 1388
TseFI	GTSAC	2 cut(s)	94, 907
TseI	GCWGC	2 cut(s)	650, 1620
Tsp45I	GTSAC	2 cut(s)	94, 907
TspDTI	ATGAA	4 cut(s)	17, 141, 888, 950
TspGWI	ACGGA	2 cut(s)	833, 1307
TspRI	CASTG	4 cut(s)	746, 758, 958, 1388
Vha464I	CTTAAG	1 cut(s)	998
VpaK11BI	GGWCC	2 cut(s)	168, 602
VspI	ATTAAT	1 cut(s)	519
XapI	RAATTY	2 cut(s)	142, 1845
XceI	RCATGY	8 cut(s)	216, 1017, 1305, 1470, 1536, 1648, 1665, 1825
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1249
Zsp2I	ATGCAT	1 cut(s)	1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.