Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0004290

Physical Location & Seq

Genomic Coordinates Forward (+)

8363942 .. 8370150

Gene Structure 6209 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG104500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGACACTCCTGAGGAAGAAAAGGAAGATGCTGATTATCTGCAGAAAATTGCAATTCCCTCGGCCCTTATCAGCAAATCTTTGGGGGATAGCATTAAAAAAGCTCTATCTGATGGGGAGATGGTCAACATTAATCTAGACTGGACAGAGGCTCTTCCACATCCTGACGAGCGTGTTGAGTATGAGTTCTGGACAAACAGCAATGATGAGTGTGGACCAAAGTGTGACAGCCAGATTGATTTTGTGAAGAACTTTAAAGGAGCTGCTCAGGTACTTGAGCGGAAGGGGTACACACAGTTTACTCCACACTATATTACTTGGTACTGCCCAGACGCTTTTGTTTTGAGCAAACAGTGCAAGGCTCAGTGCATTAATCATGGGAGGTACTGTGCTCCAGATCCCGAACAGGATTTTAGTAAAGGTTATGATGGGAAAGATGTTGTGGTTCAAAATCTCCGTCAAGCTTGCTTCTATAAAGTGGCCAATGAAAGTGGAAGGCCATGGCTTTGGTGGGACTATGTGACTGACTTTGCGATTCGATGCCCAATGAAAGAGAAAAAGTACACTTCTGAGTGTGCAAATCAAGTTATTGAATCCTTGGGTGTTGATCTTAAGAAGATACAGAAATGTATTGGGGATCCTAAGGCAAATGAGGAGAATGCGGTTCTAAAGGCTGAACAGGATGCACAGATTGGCAAGGGCTCCCGTGGAGATGTTACCATATTGCCAACTCTTATTATAAACAACAGACAGTACAGAGGAAAATTAGCCAAAGGAGCTGTTCTCAAGGCCATCTGTGCTGGTTTTCAAGAGACTACTGAGCCTGCTGTGTGTTTGAGTGAAGAAGTGCAAACCAATGAATGCCTGGAAAACAATGGAGGTTGCTGGCAGGACAAAGCTTCTAACTTAACTGCATGCAGGGATACATTCCGGGGAAGAGTGTGTGAATGCCCTACTGTGCAAGGCGTGAAGTTTTTGGGTGATGGTTATACTCACTGTGAAGCTTCCGGAGCGTTACGATGTGAAATCAACTACGGAGGTTGTTGGAGGGAAACTCAAAATGGCCATACTTACTCTGCATGTCGTGATGACCATACAAAAGGTTGCATGTGCCCGCCAGGATTCAAGGGTGATGGAGAGAAAACATGTGAAGATGTTGATGAGTGTGAGGAAAAAGTGGCTTGCCAATGTGCACAATGTAAATGCAAGAATACTTGGGGCAGTTATGAGTGCAGCTGTGGTGGTGGTTTACTGTACATGCGAGAGCATGATGCATGTATAAGTCAAAATGCCAGGAATACAGAGTATAGCTGGAGCTTTATTTGGGTTATCATTCTATGCTTGGGTGCTGTTGGAGTTGGAGGATATGCAGTTTACAAGTACAGAATCCGAAGATACATGGACTCGGAGATCCGGGCAATCATGGCACAGTACATGCCATTGGATAATCAAGGAGAAATTCCTAATCATGTCTCCCGTGGTGATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005048 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006892 GO:0006896 GO:0007034 GO:0008104 GO:0008150 GO:0009940 GO:0010008 GO:0010209 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0030135 GO:0030136 GO:0030659 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098791 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA cEGF

Protein Analysis

496

Amino Acids

55.63

Weight (kDa)

5.2

Isoelectric Point (pI)

38.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VSR_TRX	PF25011	59 - 266	2.8e-105	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	369 - 388	1.2e-06	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30290 AT2G30290
fragaria_vesca	FvH4_6g09810 FvH4_6g09810 FvH4_6g09810
malus_domestica	MD04G1175100.v1.1 MD12G1188800.v1.1
prunus_persica	Prupe.6G294400_v2.0.a1 Prupe.6G294400_v2.0.a1
pyrus_communis	pycom04g15450 pycom12g17630
rosa_chinensis	RchiOBHm_Chr3g0460421 RchiOBHm_Chr6g0252231
rosa_laevigata	RLG00000025013
rosa_multiflora	Rmu_co8220956.1_g000001 Rmu_co8306627.1_g000001 Rmu_sc0004267.1_g000012 Rmu_sc0006252.1_g000025 Rmu_sc0009799.1_g000013 Rmu_sc0021028.1_g000001 Rmu_sc0025932.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419500 Rroxscaffold_7G00216220
rosa_rugosa	Rorug03G0042500
rosa_samantha	Rh3AG100500 Rh3BG104500 Rh3CG106300 Rh3DG105800 Rh6AG020100 Rh6BG015600
rosa_wichuraiana	Rw3G008550 Rw6G001650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	740
AccBSI	CCGCTC	1 cut(s)	280
AccIII	TCCGGA	1 cut(s)	1007
AciI	CCGC	3 cut(s)	280, 662, 1115
AclWI	GGATC	4 cut(s)	392, 632, 645, 1405
AcoI	YGGCCR	2 cut(s)	480, 1063
AcsI	RAATTY	1 cut(s)	1458
AfaI	GTAC	9 cut(s)	273, 290, 323, 386, 563, 755, 1256, 1382, 1433
AflII	CTTAAG	1 cut(s)	611
AflIII	ACRYGT	1 cut(s)	1145
AgsI	TTSAA	4 cut(s)	449, 593, 809, 1126
AjnI	CCWGG	3 cut(s)	864, 1117, 1292
AluBI	AGCT	9 cut(s)	104, 263, 464, 779, 899, 1004, 1236, 1311, 1317
AluI	AGCT	9 cut(s)	104, 263, 464, 779, 899, 1004, 1236, 1311, 1317
Alw21I	GWGCWC	2 cut(s)	394, 1195
Alw26I	GTCTC	2 cut(s)	806, 1477
Alw44I	GTGCAC	1 cut(s)	1191
AlwI	GGATC	4 cut(s)	392, 632, 645, 1405
Aor13HI	TCCGGA	1 cut(s)	1007
AoxI	GGCC	5 cut(s)	63, 480, 497, 789, 1063
ApaLI	GTGCAC	1 cut(s)	1191
ApeKI	GCWGC	2 cut(s)	263, 1233
ApoI	RAATTY	1 cut(s)	1458
ArsI	GACNNNNNNTTYG	2 cut(s)	442, 474
AseI	ATTAAT	2 cut(s)	132, 372
AspS9I	GGNCC	2 cut(s)	64, 215
AsuC2I	CCSGG	2 cut(s)	932, 1415
AsuHPI	GGTGA	2 cut(s)	992, 1142
AvaII	GGWCC	1 cut(s)	215
AxyI	CCTNAGG	2 cut(s)	12, 642
BaeGI	GKGCMC	2 cut(s)	1115, 1195
BalI	TGGCCA	2 cut(s)	482, 1065
BamHI	GGATCC	1 cut(s)	637
BanII	GRGCYC	1 cut(s)	704
Bbv12I	GWGCWC	2 cut(s)	394, 1195
BbvI	GCAGC	2 cut(s)	250, 1245
BccI	CCATC	6 cut(s)	107, 115, 422, 800, 977, 1127
BcgI	CGANNNNNNTGC	2 cut(s)	42, 76
BciT130I	CCWGG	3 cut(s)	866, 1119, 1294
BciVI	GTATCC	1 cut(s)	916
BcnI	CCSGG	2 cut(s)	932, 1415
BcoDI	GTCTC	2 cut(s)	806, 1477
BfaI	CTAG	1 cut(s)	137
BfmI	CTRYAG	1 cut(s)	41
BfrI	CTTAAG	1 cut(s)	611
BfuI	GTATCC	1 cut(s)	916
BisI	GCNGC	2 cut(s)	264, 1234
BlsI	GCNGC	2 cut(s)	265, 1235
Bme1390I	CCNGG	5 cut(s)	866, 932, 1119, 1294, 1415
Bme18I	GGWCC	1 cut(s)	215
BmgT120I	GGNCC	2 cut(s)	64, 215
BmiI	GGNNCC	2 cut(s)	639, 703
BmrFI	CCNGG	5 cut(s)	866, 932, 1119, 1294, 1415
BmsI	GCATC	4 cut(s)	19, 530, 673, 1261
BplI	GAGNNNNNCTC	4 cut(s)	768, 800, 1039, 1071
BpmI	CTGGAG	2 cut(s)	378, 1333
Bpu10I	CCTNAGC	1 cut(s)	267
BpuEI	CTTGAG	2 cut(s)	296, 770
BpuMI	CCSGG	2 cut(s)	932, 1415
BsaJI	CCNNGG	6 cut(s)	60, 500, 597, 706, 931, 1477
BsaWI	WCCGGW	1 cut(s)	1007
BsaXI	ACNNNNNCTCC	2 cut(s)	373, 403
Bse1I	ACTGG	1 cut(s)	146
Bse21I	CCTNAGG	2 cut(s)	12, 642
Bse3DI	GCAATG	1 cut(s)	208
BseAI	TCCGGA	1 cut(s)	1007
BseBI	CCWGG	3 cut(s)	866, 1119, 1294
BseDI	CCNNGG	6 cut(s)	60, 500, 597, 706, 931, 1477
BseGI	GGATG	2 cut(s)	160, 688
BseMI	GCAATG	1 cut(s)	208
BseMII	CTCAG	4 cut(s)	281, 377, 561, 810
BseNI	ACTGG	1 cut(s)	146
BseRI	GAGGAG	1 cut(s)	668
BseSI	GKGCMC	2 cut(s)	1115, 1195
BseXI	GCAGC	2 cut(s)	250, 1245
BsgI	GTGCAG	1 cut(s)	1252
BshFI	GGCC	5 cut(s)	65, 482, 499, 791, 1065
BsiHKAI	GWGCWC	2 cut(s)	394, 1195
BsiSI	CCGG	3 cut(s)	931, 1008, 1414
BslFI	GGGAC	1 cut(s)	527
BsmAI	GTCTC	2 cut(s)	806, 1477
BsmFI	GGGAC	1 cut(s)	527
BsmI	GAATGC	3 cut(s)	664, 866, 953
BsnI	GGCC	5 cut(s)	65, 482, 499, 791, 1065
Bsp1286I	GDGCHC	4 cut(s)	394, 704, 1115, 1195
Bsp13I	TCCGGA	1 cut(s)	1007
Bsp1407I	TGTACA	1 cut(s)	1254
Bsp143I	GATC	4 cut(s)	397, 607, 637, 1410
Bsp19I	CCATGG	1 cut(s)	500
BspACI	CCGC	3 cut(s)	280, 662, 1115
BspANI	GGCC	5 cut(s)	65, 482, 499, 791, 1065
BspCNI	CTCAG	5 cut(s)	4, 280, 376, 562, 811
BspEI	TCCGGA	1 cut(s)	1007
BspLI	GGNNCC	2 cut(s)	639, 703
BspMAI	CTGCAG	1 cut(s)	45
BspPI	GGATC	4 cut(s)	392, 632, 645, 1405
BspQI	GCTCTTC	1 cut(s)	159
BspTI	CTTAAG	1 cut(s)	611
BsrBI	CCGCTC	1 cut(s)	280
BsrDI	GCAATG	1 cut(s)	208
BsrGI	TGTACA	1 cut(s)	1254
BsrI	ACTGG	1 cut(s)	146
BssECI	CCNNGG	6 cut(s)	60, 500, 597, 706, 931, 1477
BssMI	GATC	4 cut(s)	397, 607, 637, 1410
BssT1I	CCWWGG	2 cut(s)	500, 597
Bst2UI	CCWGG	3 cut(s)	866, 1119, 1294
Bst4CI	ACNGT	8 cut(s)	297, 354, 389, 753, 958, 998, 1254, 1431
Bst6I	CTCTTC	2 cut(s)	159, 931
BstAFI	CTTAAG	1 cut(s)	611
BstAPI	GCANNNNNTGC	1 cut(s)	354
BstAUI	TGTACA	1 cut(s)	1254
BstC8I	GCNNGC	6 cut(s)	466, 825, 887, 916, 1115, 1183
BstDEI	CTNAG	6 cut(s)	12, 267, 363, 570, 642, 819
BstDSI	CCRYGG	3 cut(s)	500, 706, 1477
BstF5I	GGATG	2 cut(s)	160, 688
BstKTI	GATC	4 cut(s)	400, 610, 640, 1413
BstMAI	GTCTC	2 cut(s)	806, 1477
BstMBI	GATC	4 cut(s)	397, 607, 637, 1410
BstMWI	GCNNNNNNNGC	5 cut(s)	354, 776, 797, 1010, 1424
BstNI	CCWGG	3 cut(s)	866, 1119, 1294
BstNSI	RCATGY	7 cut(s)	918, 1083, 1111, 1149, 1261, 1278, 1438
BstSCI	CCNGG	5 cut(s)	864, 930, 1117, 1292, 1413
BstSFI	CTRYAG	1 cut(s)	41
BstSLI	GKGCMC	2 cut(s)	1115, 1195
BstV1I	GCAGC	2 cut(s)	250, 1245
BstX2I	RGATCY	3 cut(s)	397, 637, 1410
BstXI	CCANNNNNNTGG	1 cut(s)	507
BstYI	RGATCY	3 cut(s)	397, 637, 1410
Bsu36I	CCTNAGG	2 cut(s)	12, 642
BsuI	GTATCC	1 cut(s)	916
BsuRI	GGCC	5 cut(s)	65, 482, 499, 791, 1065
BtgI	CCRYGG	3 cut(s)	500, 706, 1477
BtsCI	GGATG	2 cut(s)	160, 688
BtsIMutI	CAGTG	3 cut(s)	359, 371, 994
Cac8I	GCNNGC	6 cut(s)	466, 825, 887, 916, 1115, 1183
Cfr13I	GGNCC	2 cut(s)	64, 215
CseI	GACGC	1 cut(s)	341
Csp6I	GTAC	9 cut(s)	272, 289, 322, 385, 562, 754, 1255, 1381, 1432
CspCI	CAANNNNNGTGG	2 cut(s)	472, 507
CviQI	GTAC	9 cut(s)	272, 289, 322, 385, 562, 754, 1255, 1381, 1432
DdeI	CTNAG	6 cut(s)	12, 267, 363, 570, 642, 819
DpnI	GATC	4 cut(s)	399, 609, 639, 1412
DpnII	GATC	4 cut(s)	397, 607, 637, 1410
DraI	TTTAAA	1 cut(s)	256
EaeI	YGGCCR	2 cut(s)	480, 1063
Eam1104I	CTCTTC	2 cut(s)	159, 931
EarI	CTCTTC	2 cut(s)	159, 931
Eco130I	CCWWGG	2 cut(s)	500, 597
Eco24I	GRGCYC	1 cut(s)	704
Eco32I	GATATC	1 cut(s)	1486
Eco47I	GGWCC	1 cut(s)	215
Eco81I	CCTNAGG	2 cut(s)	12, 642
EcoRII	CCWGG	3 cut(s)	864, 1117, 1292
EcoRV	GATATC	1 cut(s)	1486
EcoT14I	CCWWGG	2 cut(s)	500, 597
EcoT22I	ATGCAT	1 cut(s)	1276
EcoT38I	GRGCYC	1 cut(s)	704
ErhI	CCWWGG	2 cut(s)	500, 597
FaqI	GGGAC	1 cut(s)	527
FauI	CCCGC	1 cut(s)	1122
Fnu4HI	GCNGC	2 cut(s)	264, 1234
FokI	GGATG	2 cut(s)	147, 695
FriOI	GRGCYC	1 cut(s)	704
Fsp4HI	GCNGC	2 cut(s)	264, 1234
FspBI	CTAG	1 cut(s)	137
GluI	GCNGC	2 cut(s)	264, 1234
GsuI	CTGGAG	2 cut(s)	378, 1333
HaeIII	GGCC	5 cut(s)	65, 482, 499, 791, 1065
HapII	CCGG	3 cut(s)	931, 1008, 1414
HgaI	GACGC	1 cut(s)	341
HincII	GTYRAC	1 cut(s)	127
HindII	GTYRAC	1 cut(s)	127
HindIII	AAGCTT	3 cut(s)	462, 897, 1002
HinfI	GANTC	5 cut(s)	535, 593, 1122, 1386, 1403
HpaII	CCGG	3 cut(s)	931, 1008, 1414
HphI	GGTGA	2 cut(s)	992, 1142
Hpy166II	GTNNAC	8 cut(s)	127, 215, 291, 300, 564, 1193, 1250, 1375
Hpy188I	TCNGA	5 cut(s)	112, 571, 1391, 1408, 1490
Hpy188III	TCNNGA	9 cut(s)	11, 137, 164, 190, 395, 401, 809, 1008, 1085
Hpy8I	GTNNAC	8 cut(s)	127, 215, 291, 300, 564, 1193, 1250, 1375
HpyAV	CCTTC	2 cut(s)	277, 489
HpyCH4III	ACNGT	8 cut(s)	297, 354, 389, 753, 958, 998, 1254, 1431
HpyF10VI	GCNNNNNNNGC	5 cut(s)	354, 776, 797, 1010, 1424
HpyF3I	CTNAG	6 cut(s)	12, 267, 363, 570, 642, 819
Kpn2I	TCCGGA	1 cut(s)	1007
Kzo9I	GATC	4 cut(s)	397, 607, 637, 1410
LguI	GCTCTTC	1 cut(s)	159
LmnI	GCTCC	6 cut(s)	260, 397, 707, 776, 1010, 1314
Lsp1109I	GCAGC	2 cut(s)	250, 1245
LweI	GCATC	4 cut(s)	19, 530, 673, 1261
MaeI	CTAG	1 cut(s)	137
MaeIII	GTNAC	4 cut(s)	224, 520, 715, 1014
MalI	GATC	4 cut(s)	399, 609, 639, 1412
MbiI	CCGCTC	1 cut(s)	280
MboI	GATC	4 cut(s)	397, 607, 637, 1410
MboII	GAAGA	9 cut(s)	29, 38, 146, 259, 628, 854, 948, 1163, 1404
MflI	RGATCY	3 cut(s)	397, 637, 1410
MhlI	GDGCHC	4 cut(s)	394, 704, 1115, 1195
MlsI	TGGCCA	2 cut(s)	482, 1065
MluCI	AATT	4 cut(s)	48, 54, 764, 1458
MluNI	TGGCCA	2 cut(s)	482, 1065
MlyI	GAGTC	1 cut(s)	1397
MmeI	TCCRAC	3 cut(s)	1025, 1333, 1339
Mox20I	TGGCCA	2 cut(s)	482, 1065
Mph1103I	ATGCAT	1 cut(s)	1276
MroI	TCCGGA	1 cut(s)	1007
MscI	TGGCCA	2 cut(s)	482, 1065
MseI	TTAA	6 cut(s)	96, 132, 255, 372, 612, 908
Msp20I	TGGCCA	2 cut(s)	482, 1065
MspA1I	CMGCKG	1 cut(s)	1236
MspCI	CTTAAG	1 cut(s)	611
MspI	CCGG	3 cut(s)	931, 1008, 1414
MspR9I	CCNGG	5 cut(s)	866, 932, 1119, 1294, 1415
Mva1269I	GAATGC	3 cut(s)	664, 866, 953
MvaI	CCWGG	3 cut(s)	866, 1119, 1294
MwoI	GCNNNNNNNGC	5 cut(s)	354, 776, 797, 1010, 1424
NciI	CCSGG	2 cut(s)	932, 1415
NcoI	CCATGG	1 cut(s)	500
NdeII	GATC	4 cut(s)	397, 607, 637, 1410
NlaIV	GGNNCC	2 cut(s)	639, 703
NmeAIII	GCCGAG	1 cut(s)	41
NmuCI	GTSAC	2 cut(s)	224, 520
NsiI	ATGCAT	1 cut(s)	1276
NspI	RCATGY	7 cut(s)	918, 1083, 1111, 1149, 1261, 1278, 1438
PaeI	GCATGC	1 cut(s)	918
PciI	ACATGT	1 cut(s)	1145
PciSI	GCTCTTC	1 cut(s)	159
PctI	GAATGC	3 cut(s)	664, 866, 953
PfeI	GAWTC	4 cut(s)	535, 593, 1122, 1386
PkrI	GCNGC	2 cut(s)	265, 1235
PleI	GAGTC	1 cut(s)	1397
PpsI	GAGTC	1 cut(s)	1397
PscI	ACATGT	1 cut(s)	1145
PshBI	ATTAAT	2 cut(s)	132, 372
PsiI	TTATAA	1 cut(s)	740
Psp6I	CCWGG	3 cut(s)	864, 1117, 1292
PspGI	CCWGG	3 cut(s)	864, 1117, 1292
PspN4I	GGNNCC	2 cut(s)	639, 703
PspPI	GGNCC	2 cut(s)	64, 215
PstI	CTGCAG	1 cut(s)	45
PsuI	RGATCY	3 cut(s)	397, 637, 1410
PvuII	CAGCTG	1 cut(s)	1236
RsaI	GTAC	9 cut(s)	273, 290, 323, 386, 563, 755, 1256, 1382, 1433
RsaNI	GTAC	9 cut(s)	272, 289, 322, 385, 562, 754, 1255, 1381, 1432
SapI	GCTCTTC	1 cut(s)	159
SaqAI	TTAA	6 cut(s)	96, 132, 255, 372, 612, 908
SatI	GCNGC	2 cut(s)	264, 1234
Sau3AI	GATC	4 cut(s)	397, 607, 637, 1410
Sau96I	GGNCC	2 cut(s)	64, 215
SchI	GAGTC	1 cut(s)	1397
ScrFI	CCNGG	5 cut(s)	866, 932, 1119, 1294, 1415
SduI	GDGCHC	4 cut(s)	394, 704, 1115, 1195
SfaNI	GCATC	4 cut(s)	19, 530, 673, 1261
SfcI	CTRYAG	1 cut(s)	41
SinI	GGWCC	1 cut(s)	215
SmlI	CTYRAG	3 cut(s)	275, 611, 785
SmoI	CTYRAG	3 cut(s)	275, 611, 785
SphI	GCATGC	1 cut(s)	918
Sse9I	AATT	4 cut(s)	48, 54, 764, 1458
SsiI	CCGC	3 cut(s)	280, 662, 1115
SspMI	CTAG	1 cut(s)	137
StyD4I	CCNGG	5 cut(s)	864, 930, 1117, 1292, 1413
StyI	CCWWGG	2 cut(s)	500, 597
TaaI	ACNGT	8 cut(s)	297, 354, 389, 753, 958, 998, 1254, 1431
TaqI	TCGA	1 cut(s)	538
TasI	AATT	4 cut(s)	48, 54, 764, 1458
TatI	WGTACW	5 cut(s)	561, 753, 1254, 1380, 1431
TfiI	GAWTC	4 cut(s)	535, 593, 1122, 1386
Tru1I	TTAA	6 cut(s)	96, 132, 255, 372, 612, 908
Tru9I	TTAA	6 cut(s)	96, 132, 255, 372, 612, 908
TscAI	CASTG	3 cut(s)	359, 371, 1001
TseFI	GTSAC	2 cut(s)	224, 520
TseI	GCWGC	2 cut(s)	263, 1233
Tsp45I	GTSAC	2 cut(s)	224, 520
TspDTI	ATGAA	3 cut(s)	501, 563, 873
TspGWI	ACGGA	2 cut(s)	446, 1050
TspRI	CASTG	3 cut(s)	359, 371, 1001
Vha464I	CTTAAG	1 cut(s)	611
VneI	GTGCAC	1 cut(s)	1191
VpaK11BI	GGWCC	1 cut(s)	215
VspI	ATTAAT	2 cut(s)	132, 372
XapI	RAATTY	1 cut(s)	1458
XbaI	TCTAGA	1 cut(s)	136
XceI	RCATGY	7 cut(s)	918, 1083, 1111, 1149, 1261, 1278, 1438
XcmI	CCANNNNNNNNNTGG	2 cut(s)	507, 862
XspI	CTAG	1 cut(s)	137
Zsp2I	ATGCAT	1 cut(s)	1276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.