Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003174

Physical Location & Seq

Genomic Coordinates Forward (+)

13891537 .. 13894767

Gene Structure 3231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G32760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGAAAGAGTATCAGAGCGAAGTTTGTCAGAAAATTTGAGAAGAAGCGATCGAGAAGATGGGAAGATTATAGAATGGGAAGAATTCGACCATGAGCTTACGAGGTTATGGAGTCTTTCTTCTGCTATGAAATTAGCCACAGAGAGGAAACAAATCCTGCAACCGAAACTTGAGTCTCTTATTCAGGTTAGTACTGAATCATTGAGACGCACTAATGAACTTGAAGAAATGCGTCAGAGGCTTGAAGCAAGAAAATTGTTGGTGGACAAGACATCAGTTGCTTGCAAAGTTACTGAGCAGGATGTTAAAAAGAAAGAGGAGAATCTTAGTACAGAAGTGAGGTCTTTGCTAGTAGGCGGAACAACTCTTTCGATCGCTAAAAGCAAATTGCAGGAATCAAACTGCCAACTAGAAGGAGAAAGTGGTTATGCACATTTAAAGATTGTAACGAATAAGCTGAGAAAGAGGCAGCAGTTCATGGTATCTCAAGTTTCATTTATCTATCCCTTGAAGATTGAAGCTGGACCTTCACAAGACCAAGAACTGGAATCATTTCCTGGTGGCAGTAGATTAGGAACTAAGCCTCTGAGTCAAGGATCTGTGAGAATTCTGGGGTTGCCTTTTAGTATGGCCCCGTTTACAAAGATGAGCTTCTTCACCGACAAGAAAGAAGTTCAGAAGTCTGCAACTGCCCTAGGATATGTAGCCCATGCCGTGTCACTAATAGCTCCTTACTTGAGAGTGCCAATTCGTTATCCTTTGTGCCTGGGGGGTTCCAAAACATACATTCGAGACTATGCACCTTACATTGAGCCTTCACCATCAGACATGTCTCCGATTACCACGCTTTCCCAAAATATTAACTTTGTAGAGTTTCCTCTGTTTCTGGATGGTCAAGATACAACACGAGCTGCCTATGCTGTCTTCTTACTAAACAAGAACATCGAGCAACTCTTGAACTTTGTGGGGGAAAATAGTCTAGGACCACGTCAGGTTCTAGCAAACCTGAAGGAGCTAATTCGAATCATCCAATCTCCAGATTATATCGATTATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04140 map04140

Pfam Domains

Protein Families

Atg14

Protein Analysis

352

Amino Acids

39.92

Weight (kDa)

8.56

Isoelectric Point (pI)

61.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32760 AT2G32760 AT2G32760
fragaria_vesca	FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790 FvH4_4g13790
malus_domestica	MD00G1113200.v1.1 MD04G1010600.v1.1
prunus_persica	Prupe.1G010300_v2.0.a1 Prupe.1G010300_v2.0.a1 Prupe.1G010300_v2.0.a1
pyrus_communis	pycom04g00870 pycom420g01290
rosa_chinensis	RchiOBHm_Chr4g0414711
rosa_laevigata	RLG00000008122
rosa_multiflora	Rmu_sc0001192.1_g000027 Rmu_sc0010606.1_g000008
rosa_roxburghii	Rroxscaffold_5G00358520
rosa_rugosa	Rorug04G0129800 Rorug04G0129900 Rorug04G0130000 Rorug04G0130100 Rorug04G0130200 Rorug04G0130200 Rorug04G0130200
rosa_samantha	Rh4AG188300 Rh4BG187300 Rh4CG200600 Rh4DG187000
rosa_wichuraiana	Rw4G016070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	544
AciI	CCGC	1 cut(s)	357
AclWI	GGATC	1 cut(s)	604
AcsI	RAATTY	3 cut(s)	34, 83, 606
AcuI	CTGAAG	1 cut(s)	1028
AfaI	GTAC	2 cut(s)	193, 331
AfiI	CCNNNNNNNGG	2 cut(s)	144, 544
AflIII	ACRYGT	1 cut(s)	828
AgsI	TTSAA	5 cut(s)	224, 245, 511, 518, 958
AjiI	CACGTC	1 cut(s)	989
AjnI	CCWGG	2 cut(s)	556, 765
AluBI	AGCT	7 cut(s)	97, 457, 521, 651, 728, 911, 1015
AluI	AGCT	7 cut(s)	97, 457, 521, 651, 728, 911, 1015
Alw26I	GTCTC	4 cut(s)	180, 199, 786, 837
AlwI	GGATC	1 cut(s)	604
AoxI	GGCC	1 cut(s)	630
ApeKI	GCWGC	2 cut(s)	469, 911
ApoI	RAATTY	3 cut(s)	34, 83, 606
ArsI	GACNNNNNNTTYG	2 cut(s)	158, 190
Asp700I	GAANNNNTTC	1 cut(s)	552
AspA2I	CCTAGG	1 cut(s)	694
AspS9I	GGNCC	3 cut(s)	524, 631, 983
AsuHPI	GGTGA	2 cut(s)	649, 810
AsuII	TTCGAA	1 cut(s)	1021
AvaII	GGWCC	2 cut(s)	524, 983
AvrII	CCTAGG	1 cut(s)	694
BauI	CACGAG	1 cut(s)	906
BbsI	GAAGAC	1 cut(s)	916
BbvI	GCAGC	2 cut(s)	481, 898
BccI	CCATC	3 cut(s)	53, 829, 884
BceAI	ACGGC	1 cut(s)	698
BciT130I	CCWGG	2 cut(s)	558, 767
BcoDI	GTCTC	4 cut(s)	180, 199, 786, 837
BfaI	CTAG	5 cut(s)	350, 410, 695, 980, 998
BisI	GCNGC	2 cut(s)	470, 912
BlnI	CCTAGG	1 cut(s)	694
BlsI	GCNGC	2 cut(s)	471, 913
BmcAI	AGTACT	1 cut(s)	193
Bme1390I	CCNGG	2 cut(s)	558, 767
Bme18I	GGWCC	2 cut(s)	524, 983
BmgBI	CACGTC	1 cut(s)	989
BmgT120I	GGNCC	3 cut(s)	524, 631, 983
BmiI	GGNNCC	2 cut(s)	633, 775
BmrFI	CCNGG	2 cut(s)	558, 767
BpiI	GAAGAC	1 cut(s)	916
BpmI	CTGGAG	1 cut(s)	1020
Bpu14I	TTCGAA	1 cut(s)	1021
BpuEI	CTTGAG	3 cut(s)	191, 471, 757
Bsa29I	ATCGAT	1 cut(s)	1047
BsaJI	CCNNGG	2 cut(s)	694, 766
Bsc4I	CCNNNNNNNGG	2 cut(s)	144, 544
Bse1I	ACTGG	1 cut(s)	549
BseBI	CCWGG	2 cut(s)	558, 767
BseCI	ATCGAT	1 cut(s)	1047
BseDI	CCNNGG	2 cut(s)	694, 766
BseGI	GGATG	3 cut(s)	307, 895, 1026
BseLI	CCNNNNNNNGG	2 cut(s)	144, 544
BseMII	CTCAG	3 cut(s)	285, 449, 578
BseNI	ACTGG	1 cut(s)	549
BseRI	GAGGAG	1 cut(s)	332
BseXI	GCAGC	2 cut(s)	481, 898
Bsh1285I	CGRYCG	2 cut(s)	52, 375
BshFI	GGCC	1 cut(s)	632
BshVI	ATCGAT	1 cut(s)	1047
BsiEI	CGRYCG	2 cut(s)	52, 375
BslI	CCNNNNNNNGG	2 cut(s)	144, 544
BsmAI	GTCTC	4 cut(s)	180, 199, 786, 837
BsmBI	CGTCTC	1 cut(s)	199
BsnI	GGCC	1 cut(s)	632
Bsp119I	TTCGAA	1 cut(s)	1021
Bsp143I	GATC	3 cut(s)	49, 372, 596
BspACI	CCGC	1 cut(s)	357
BspANI	GGCC	1 cut(s)	632
BspCNI	CTCAG	3 cut(s)	286, 450, 579
BspDI	ATCGAT	1 cut(s)	1047
BspLI	GGNNCC	2 cut(s)	633, 775
BspPI	GGATC	1 cut(s)	604
BspT104I	TTCGAA	1 cut(s)	1021
BsrI	ACTGG	1 cut(s)	549
BssECI	CCNNGG	2 cut(s)	694, 766
BssMI	GATC	3 cut(s)	49, 372, 596
BssSI	CACGAG	1 cut(s)	906
BssT1I	CCWWGG	1 cut(s)	694
Bst2BI	CACGAG	1 cut(s)	906
Bst2UI	CCWGG	2 cut(s)	558, 767
BstBI	TTCGAA	1 cut(s)	1021
BstC8I	GCNNGC	1 cut(s)	283
BstDEI	CTNAG	5 cut(s)	294, 326, 458, 579, 587
BstF5I	GGATG	3 cut(s)	307, 895, 1026
BstKTI	GATC	3 cut(s)	52, 375, 599
BstMAI	GTCTC	4 cut(s)	180, 199, 786, 837
BstMBI	GATC	3 cut(s)	49, 372, 596
BstMCI	CGRYCG	2 cut(s)	52, 375
BstMWI	GCNNNNNNNGC	2 cut(s)	238, 917
BstNI	CCWGG	2 cut(s)	558, 767
BstNSI	RCATGY	1 cut(s)	832
BstSCI	CCNGG	2 cut(s)	556, 765
BstV1I	GCAGC	2 cut(s)	481, 898
BstV2I	GAAGAC	1 cut(s)	916
BstX2I	RGATCY	1 cut(s)	596
BstYI	RGATCY	1 cut(s)	596
Bsu15I	ATCGAT	1 cut(s)	1047
BsuRI	GGCC	1 cut(s)	632
BsuTUI	ATCGAT	1 cut(s)	1047
BtrI	CACGTC	1 cut(s)	989
BtsCI	GGATG	3 cut(s)	307, 895, 1026
Cac8I	GCNNGC	1 cut(s)	283
Cfr13I	GGNCC	3 cut(s)	524, 631, 983
ClaI	ATCGAT	1 cut(s)	1047
CseI	GACGC	2 cut(s)	216, 221
Csp6I	GTAC	2 cut(s)	192, 330
CviAII	CATG	4 cut(s)	92, 478, 710, 829
CviQI	GTAC	2 cut(s)	192, 330
DdeI	CTNAG	5 cut(s)	294, 326, 458, 579, 587
DpnI	GATC	3 cut(s)	51, 374, 598
DpnII	GATC	3 cut(s)	49, 372, 596
DraI	TTTAAA	1 cut(s)	438
EciI	GGCGGA	1 cut(s)	372
Eco130I	CCWWGG	1 cut(s)	694
Eco47I	GGWCC	2 cut(s)	524, 983
Eco57I	CTGAAG	1 cut(s)	1028
EcoRI	GAATTC	2 cut(s)	83, 606
EcoRII	CCWGG	2 cut(s)	556, 765
EcoT14I	CCWWGG	1 cut(s)	694
ErhI	CCWWGG	1 cut(s)	694
Esp3I	CGTCTC	1 cut(s)	199
FaeI	CATG	4 cut(s)	95, 481, 713, 832
FalI	AAGNNNNNCTT	2 cut(s)	635, 667
FatI	CATG	4 cut(s)	91, 477, 709, 828
Fnu4HI	GCNGC	2 cut(s)	470, 912
FokI	GGATG	3 cut(s)	314, 902, 1013
Fsp4HI	GCNGC	2 cut(s)	470, 912
FspBI	CTAG	5 cut(s)	350, 410, 695, 980, 998
GluI	GCNGC	2 cut(s)	470, 912
GsuI	CTGGAG	1 cut(s)	1020
HaeIII	GGCC	1 cut(s)	632
HgaI	GACGC	2 cut(s)	216, 221
Hin1II	CATG	4 cut(s)	95, 481, 713, 832
HinfI	GANTC	8 cut(s)	112, 173, 197, 322, 395, 548, 589, 1023
HphI	GGTGA	2 cut(s)	649, 810
Hpy166II	GTNNAC	2 cut(s)	265, 639
Hpy188I	TCNGA	7 cut(s)	16, 31, 237, 588, 678, 826, 837
Hpy188III	TCNNGA	6 cut(s)	53, 791, 887, 896, 955, 1037
Hpy8I	GTNNAC	2 cut(s)	265, 639
HpyAV	CCTTC	4 cut(s)	407, 537, 825, 1003
HpyCH4IV	ACGT	1 cut(s)	988
HpyCH4V	TGCA	6 cut(s)	160, 285, 391, 431, 686, 800
HpyF10VI	GCNNNNNNNGC	2 cut(s)	238, 917
HpyF3I	CTNAG	5 cut(s)	294, 326, 458, 579, 587
HpySE526I	ACGT	1 cut(s)	988
Hsp92II	CATG	4 cut(s)	95, 481, 713, 832
Kzo9I	GATC	3 cut(s)	49, 372, 596
LmnI	GCTCC	2 cut(s)	733, 1012
Lsp1109I	GCAGC	2 cut(s)	481, 898
MaeI	CTAG	5 cut(s)	350, 410, 695, 980, 998
MaeII	ACGT	1 cut(s)	988
MaeIII	GTNAC	3 cut(s)	289, 445, 717
MalI	GATC	3 cut(s)	51, 374, 598
MboI	GATC	3 cut(s)	49, 372, 596
MboII	GAAGA	9 cut(s)	54, 68, 76, 92, 111, 236, 523, 646, 916
MflI	RGATCY	1 cut(s)	596
MluCI	AATT	8 cut(s)	34, 83, 131, 254, 386, 606, 747, 1017
MlyI	GAGTC	3 cut(s)	121, 182, 598
MnlI	CCTC	8 cut(s)	96, 138, 231, 310, 333, 459, 594, 888
MroXI	GAANNNNTTC	1 cut(s)	552
MseI	TTAA	3 cut(s)	306, 437, 861
MspR9I	CCNGG	2 cut(s)	558, 767
MvaI	CCWGG	2 cut(s)	558, 767
MwoI	GCNNNNNNNGC	2 cut(s)	238, 917
NdeII	GATC	3 cut(s)	49, 372, 596
NlaIII	CATG	4 cut(s)	95, 481, 713, 832
NlaIV	GGNNCC	2 cut(s)	633, 775
NmuCI	GTSAC	1 cut(s)	717
NspI	RCATGY	1 cut(s)	832
NspV	TTCGAA	1 cut(s)	1021
PciI	ACATGT	1 cut(s)	828
PdmI	GAANNNNTTC	1 cut(s)	552
PfeI	GAWTC	5 cut(s)	197, 322, 395, 548, 1023
PflFI	GACNNNGTC	1 cut(s)	987
PflMI	CCANNNNNTGG	1 cut(s)	544
PkrI	GCNGC	2 cut(s)	471, 913
Ple19I	CGATCG	2 cut(s)	52, 375
PleI	GAGTC	3 cut(s)	120, 181, 597
PpsI	GAGTC	3 cut(s)	120, 181, 597
PscI	ACATGT	1 cut(s)	828
Psp6I	CCWGG	2 cut(s)	556, 765
PspGI	CCWGG	2 cut(s)	556, 765
PspN4I	GGNNCC	2 cut(s)	633, 775
PspPI	GGNCC	3 cut(s)	524, 631, 983
PsuI	RGATCY	1 cut(s)	596
PsyI	GACNNNGTC	1 cut(s)	987
PvuI	CGATCG	2 cut(s)	52, 375
RsaI	GTAC	2 cut(s)	193, 331
RsaNI	GTAC	2 cut(s)	192, 330
SaqAI	TTAA	3 cut(s)	306, 437, 861
SatI	GCNGC	2 cut(s)	470, 912
Sau3AI	GATC	3 cut(s)	49, 372, 596
Sau96I	GGNCC	3 cut(s)	524, 631, 983
ScaI	AGTACT	1 cut(s)	193
SchI	GAGTC	3 cut(s)	121, 182, 598
ScrFI	CCNGG	2 cut(s)	558, 767
SfuI	TTCGAA	1 cut(s)	1021
SinI	GGWCC	2 cut(s)	524, 983
SmlI	CTYRAG	3 cut(s)	170, 486, 736
SmoI	CTYRAG	3 cut(s)	170, 486, 736
Sse9I	AATT	8 cut(s)	34, 83, 131, 254, 386, 606, 747, 1017
SsiI	CCGC	1 cut(s)	357
SspI	AATATT	1 cut(s)	859
SspMI	CTAG	5 cut(s)	350, 410, 695, 980, 998
StyD4I	CCNGG	2 cut(s)	556, 765
StyI	CCWWGG	1 cut(s)	694
TaiI	ACGT	1 cut(s)	991
TaqI	TCGA	7 cut(s)	52, 87, 371, 790, 945, 1021, 1047
TasI	AATT	8 cut(s)	34, 83, 131, 254, 386, 606, 747, 1017
TatI	WGTACW	2 cut(s)	191, 329
TfiI	GAWTC	5 cut(s)	197, 322, 395, 548, 1023
Tru1I	TTAA	3 cut(s)	306, 437, 861
Tru9I	TTAA	3 cut(s)	306, 437, 861
TseFI	GTSAC	1 cut(s)	717
TseI	GCWGC	2 cut(s)	469, 911
Tsp45I	GTSAC	1 cut(s)	717
TspDTI	ATGAA	4 cut(s)	143, 231, 466, 483
Tth111I	GACNNNGTC	1 cut(s)	987
Van91I	CCANNNNNTGG	1 cut(s)	544
VpaK11BI	GGWCC	2 cut(s)	524, 983
XapI	RAATTY	3 cut(s)	34, 83, 606
XceI	RCATGY	1 cut(s)	832
XmaJI	CCTAGG	1 cut(s)	694
XmnI	GAANNNNTTC	1 cut(s)	552
XspI	CTAG	5 cut(s)	350, 410, 695, 980, 998
ZrmI	AGTACT	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.