Ubiquitin-2 like Rad60 SUMO-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G32765 |
| fragaria_vesca | FvH4_2g01621 |
| malus_domestica | MD04G1236700.v1.1 |
| prunus_persica | Prupe.6G356700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0244421 RchiOBHm_Chr6g0244451 |
| rosa_multiflora | Rmu_sc0000633.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00426880 Rroxscaffold_7G00215850 |
| rosa_rugosa | Rorug05G0508500 Rorug05G0508900 |
| rosa_samantha | Rh3BG013200 Rh3CG012300 Rh3DG014000 Rh6AG023600 Rh6AG023900 Rh6BG019300 Rh6CG016500 Rh6DG017600 |
| rosa_wichuraiana | Rw6G001950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 213 |
| AciI | CCGC | 1 cut(s) | 309 |
| AfaI | GTAC | 1 cut(s) | 175 |
| AluBI | AGCT | 2 cut(s) | 236, 256 |
| AluI | AGCT | 2 cut(s) | 236, 256 |
| Alw26I | GTCTC | 1 cut(s) | 54 |
| ApeKI | GCWGC | 1 cut(s) | 256 |
| AspS9I | GGNCC | 1 cut(s) | 311 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 60 |
| AvaII | GGWCC | 1 cut(s) | 311 |
| BbvI | GCAGC | 1 cut(s) | 243 |
| BcoDI | GTCTC | 1 cut(s) | 54 |
| BglII | AGATCT | 1 cut(s) | 279 |
| BisI | GCNGC | 1 cut(s) | 257 |
| BlpI | GCTNAGC | 1 cut(s) | 252 |
| BlsI | GCNGC | 1 cut(s) | 258 |
| Bme18I | GGWCC | 1 cut(s) | 311 |
| BmgT120I | GGNCC | 1 cut(s) | 311 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 252 |
| BpuEI | CTTGAG | 1 cut(s) | 74 |
| BseMII | CTCAG | 1 cut(s) | 266 |
| BseXI | GCAGC | 1 cut(s) | 243 |
| BsgI | GTGCAG | 1 cut(s) | 242 |
| BsmAI | GTCTC | 1 cut(s) | 54 |
| Bsp143I | GATC | 2 cut(s) | 53, 279 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 252 |
| BspACI | CCGC | 1 cut(s) | 309 |
| BspCNI | CTCAG | 1 cut(s) | 265 |
| BssMI | GATC | 2 cut(s) | 53, 279 |
| Bst4CI | ACNGT | 2 cut(s) | 173, 197 |
| Bst6I | CTCTTC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 2 cut(s) | 187, 252 |
| BstKTI | GATC | 2 cut(s) | 56, 282 |
| BstMAI | GTCTC | 1 cut(s) | 54 |
| BstMBI | GATC | 2 cut(s) | 53, 279 |
| BstV1I | GCAGC | 1 cut(s) | 243 |
| BstX2I | RGATCY | 1 cut(s) | 279 |
| BstYI | RGATCY | 1 cut(s) | 279 |
| Cfr13I | GGNCC | 1 cut(s) | 311 |
| Csp6I | GTAC | 1 cut(s) | 174 |
| CviAII | CATG | 3 cut(s) | 140, 262, 292 |
| CviJI | RGCY | 2 cut(s) | 236, 256 |
| CviKI_1 | RGCY | 2 cut(s) | 236, 256 |
| CviQI | GTAC | 1 cut(s) | 174 |
| DdeI | CTNAG | 2 cut(s) | 187, 252 |
| DpnI | GATC | 2 cut(s) | 55, 281 |
| DpnII | GATC | 2 cut(s) | 53, 279 |
| Eam1104I | CTCTTC | 1 cut(s) | 173 |
| EarI | CTCTTC | 1 cut(s) | 173 |
| Eco47I | GGWCC | 1 cut(s) | 311 |
| FaeI | CATG | 3 cut(s) | 143, 265, 295 |
| FaiI | YATR | 7 cut(s) | 75, 77, 126, 141, 263, 287, 293 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 170, 202 |
| FatI | CATG | 3 cut(s) | 139, 261, 291 |
| FauNDI | CATATG | 1 cut(s) | 75 |
| FblI | GTMKAC | 1 cut(s) | 213 |
| Fnu4HI | GCNGC | 1 cut(s) | 257 |
| Fsp4HI | GCNGC | 1 cut(s) | 257 |
| GluI | GCNGC | 1 cut(s) | 257 |
| Hin1II | CATG | 3 cut(s) | 143, 265, 295 |
| HinfI | GANTC | 2 cut(s) | 207, 244 |
| HphI | GGTGA | 2 cut(s) | 16, 60 |
| Hpy166II | GTNNAC | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 1 cut(s) | 206 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 59, 97 |
| Hpy8I | GTNNAC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 173, 197 |
| HpyCH4V | TGCA | 2 cut(s) | 143, 259 |
| HpyF3I | CTNAG | 2 cut(s) | 187, 252 |
| Hsp92II | CATG | 3 cut(s) | 143, 265, 295 |
| Kzo9I | GATC | 2 cut(s) | 53, 279 |
| LmnI | GCTCC | 1 cut(s) | 110 |
| LpnPI | CCDG | 3 cut(s) | 72, 92, 261 |
| Lsp1109I | GCAGC | 1 cut(s) | 243 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 2 cut(s) | 55, 281 |
| MboI | GATC | 2 cut(s) | 53, 279 |
| MboII | GAAGA | 4 cut(s) | 190, 278, 281, 284 |
| MflI | RGATCY | 1 cut(s) | 279 |
| MluCI | AATT | 1 cut(s) | 129 |
| MlyI | GAGTC | 1 cut(s) | 238 |
| MnlI | CCTC | 1 cut(s) | 109 |
| MspA1I | CMGCKG | 1 cut(s) | 256 |
| NdeI | CATATG | 1 cut(s) | 75 |
| NdeII | GATC | 2 cut(s) | 53, 279 |
| NlaIII | CATG | 3 cut(s) | 143, 265, 295 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| PfeI | GAWTC | 1 cut(s) | 207 |
| PkrI | GCNGC | 1 cut(s) | 258 |
| PleI | GAGTC | 1 cut(s) | 238 |
| PpsI | GAGTC | 1 cut(s) | 238 |
| PspPI | GGNCC | 1 cut(s) | 311 |
| PsuI | RGATCY | 1 cut(s) | 279 |
| PvuII | CAGCTG | 1 cut(s) | 256 |
| RsaI | GTAC | 1 cut(s) | 175 |
| RsaNI | GTAC | 1 cut(s) | 174 |
| SatI | GCNGC | 1 cut(s) | 257 |
| Sau3AI | GATC | 2 cut(s) | 53, 279 |
| Sau96I | GGNCC | 1 cut(s) | 311 |
| SchI | GAGTC | 1 cut(s) | 238 |
| SetI | ASST | 3 cut(s) | 96, 238, 258 |
| SinI | GGWCC | 1 cut(s) | 311 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| Sse9I | AATT | 1 cut(s) | 129 |
| SsiI | CCGC | 1 cut(s) | 309 |
| TaaI | ACNGT | 2 cut(s) | 173, 197 |
| TaqI | TCGA | 2 cut(s) | 52, 238 |
| TasI | AATT | 1 cut(s) | 129 |
| TfiI | GAWTC | 1 cut(s) | 207 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| TseI | GCWGC | 1 cut(s) | 256 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 2 cut(s) | 21, 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 311 |
| XmiI | GTMKAC | 1 cut(s) | 213 |