AT2G35736

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0007078
Physical Location & Seq
Reverse (-)
15022582 .. 15023364
783 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G35736.2

Sequence Viewer

Length: 171 bp
ATGGGAATATTCAGAAGCTGCTTCTCTTTCATAACGGGATCAGTTTTTGGGGTGTACTTGGCACAGAACTACAACGTTCCCAATATCCGGAAGCTCACCAACACCGGCCTCGTCGTCGCTAAGCACGTGGAAGAGAACTATCGCAAGCCCAAGAAAGACGATCCCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4535

Protein Analysis

56

Amino Acids

6.39

Weight (kDa)

9.58

Isoelectric Point (pI)

28.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4535 PF15054 6 - 50 1.1e-24 Domain of unknown function (DUF4535)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 87
AclI AACGTT 1 cut(s) 75
AclWI GGATC 2 cut(s) 46, 155
AcvI CACGTG 1 cut(s) 127
AfaI GTAC 1 cut(s) 56
AfiI CCNNNNNNNGG 1 cut(s) 87
AluBI AGCT 2 cut(s) 18, 94
AluI AGCT 2 cut(s) 18, 94
AlwI GGATC 2 cut(s) 46, 155
AlwNI CAGNNNCTG 1 cut(s) 18
Aor13HI TCCGGA 1 cut(s) 87
AoxI GGCC 1 cut(s) 106
ApeKI GCWGC 1 cut(s) 18
AsuHPI GGTGA 1 cut(s) 88
BbrPI CACGTG 1 cut(s) 127
BbvI GCAGC 1 cut(s) 5
BisI GCNGC 1 cut(s) 19
BlpI GCTNAGC 1 cut(s) 120
BlsI GCNGC 1 cut(s) 20
Bpu1102I GCTNAGC 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 127
BsaWI WCCGGW 1 cut(s) 87
Bsc4I CCNNNNNNNGG 1 cut(s) 87
Bse118I RCCGGY 1 cut(s) 104
BseAI TCCGGA 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 87
BseXI GCAGC 1 cut(s) 5
BshFI GGCC 1 cut(s) 108
BsiSI CCGG 2 cut(s) 88, 105
BslI CCNNNNNNNGG 1 cut(s) 87
BsnI GGCC 1 cut(s) 108
Bsp13I TCCGGA 1 cut(s) 87
Bsp143I GATC 2 cut(s) 38, 160
Bsp1720I GCTNAGC 1 cut(s) 120
BspANI GGCC 1 cut(s) 108
BspEI TCCGGA 1 cut(s) 87
BspPI GGATC 2 cut(s) 46, 155
BsrFI RCCGGY 1 cut(s) 104
BssAI RCCGGY 1 cut(s) 104
BssMI GATC 2 cut(s) 38, 160
Bst6I CTCTTC 1 cut(s) 126
BstBAI YACGTR 1 cut(s) 127
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 1 cut(s) 120
BstKTI GATC 2 cut(s) 41, 163
BstMBI GATC 2 cut(s) 38, 160
BstV1I GCAGC 1 cut(s) 5
BsuRI GGCC 1 cut(s) 108
Cac8I GCNNGC 1 cut(s) 146
CaiI CAGNNNCTG 1 cut(s) 18
Cfr10I RCCGGY 1 cut(s) 104
Csp6I GTAC 1 cut(s) 55
CviJI RGCY 4 cut(s) 18, 94, 108, 148
CviKI_1 RGCY 4 cut(s) 18, 94, 108, 148
CviQI GTAC 1 cut(s) 55
DdeI CTNAG 1 cut(s) 120
DpnI GATC 2 cut(s) 40, 162
DpnII GATC 2 cut(s) 38, 160
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
Eco72I CACGTG 1 cut(s) 127
FaiI YATR 1 cut(s) 32
Fnu4HI GCNGC 1 cut(s) 19
Fsp4HI GCNGC 1 cut(s) 19
GluI GCNGC 1 cut(s) 19
HaeIII GGCC 1 cut(s) 108
HapII CCGG 2 cut(s) 88, 105
HpaII CCGG 2 cut(s) 88, 105
HphI GGTGA 1 cut(s) 88
Hpy166II GTNNAC 1 cut(s) 55
Hpy188I TCNGA 1 cut(s) 14
Hpy188III TCNNGA 1 cut(s) 88
Hpy8I GTNNAC 1 cut(s) 55
Hpy99I CGWCG 2 cut(s) 116, 119
HpyCH4IV ACGT 2 cut(s) 75, 126
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 2 cut(s) 75, 126
Kpn2I TCCGGA 1 cut(s) 87
Kzo9I GATC 2 cut(s) 38, 160
LpnPI CCDG 2 cut(s) 101, 118
Lsp1109I GCAGC 1 cut(s) 5
MaeII ACGT 2 cut(s) 75, 126
MalI GATC 2 cut(s) 40, 162
MboI GATC 2 cut(s) 38, 160
MboII GAAGA 1 cut(s) 143
MnlI CCTC 1 cut(s) 119
MroI TCCGGA 1 cut(s) 87
MspI CCGG 2 cut(s) 88, 105
NdeII GATC 2 cut(s) 38, 160
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PkrI GCNGC 1 cut(s) 20
PmaCI CACGTG 1 cut(s) 127
PmlI CACGTG 1 cut(s) 127
Ppu21I YACGTR 1 cut(s) 127
Psp1406I AACGTT 1 cut(s) 75
PspCI CACGTG 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 18
RsaI GTAC 1 cut(s) 56
RsaNI GTAC 1 cut(s) 55
SatI GCNGC 1 cut(s) 19
Sau3AI GATC 2 cut(s) 38, 160
SetI ASST 4 cut(s) 20, 78, 96, 129
SgeI CNNG 9 cut(s) 48, 70, 100, 117, 122, 137, 139, 157, 163
SspI AATATT 1 cut(s) 9
TaiI ACGT 2 cut(s) 78, 129
TatI WGTACW 1 cut(s) 54
TseI GCWGC 1 cut(s) 18
TspDTI ATGAA 1 cut(s) 19
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.