No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35736 AT2G35736 |
| malus_domestica | MD06G1061000.v1.1 |
| prunus_persica | Prupe.5G071800_v2.0.a1 Prupe.5G072000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0468271 RchiOBHm_Chr7g0202941 |
| rosa_multiflora | Rmu_sc0000368.1_g000041 Rmu_sc0007263.1_g000001 Rmu_sc0008159.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00254170 Rroxscaffold_4G00297280 Rroxscaffold_7G00210410 |
| rosa_samantha | Rh3AG016200 Rh3CG015500 Rh3DG016700 Rh3DG207700 Rh3DG300300 Rh5CG480700 Rh6AG212000 Rh7AG202000 Rh7BG202100 Rh7DG208900 |
| rosa_wichuraiana | Rw2G024660 Rw7G017650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 6 cut(s) | 156, 194, 254, 266, 312, 315 |
| AclWI | GGATC | 2 cut(s) | 264, 326 |
| AfaI | GTAC | 1 cut(s) | 142 |
| AluBI | AGCT | 1 cut(s) | 73 |
| AluI | AGCT | 1 cut(s) | 73 |
| Alw26I | GTCTC | 2 cut(s) | 53, 84 |
| AlwI | GGATC | 2 cut(s) | 264, 326 |
| Ama87I | CYCGRG | 1 cut(s) | 127 |
| AoxI | GGCC | 1 cut(s) | 341 |
| ApeKI | GCWGC | 4 cut(s) | 113, 116, 188, 191 |
| AvaI | CYCGRG | 1 cut(s) | 127 |
| BbsI | GAAGAC | 1 cut(s) | 154 |
| BbvI | GCAGC | 4 cut(s) | 125, 128, 200, 203 |
| BccI | CCATC | 1 cut(s) | 282 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4, 38 |
| BcoDI | GTCTC | 2 cut(s) | 53, 84 |
| BfaI | CTAG | 5 cut(s) | 179, 185, 213, 242, 285 |
| BisI | GCNGC | 6 cut(s) | 114, 117, 189, 192, 267, 313 |
| BlsI | GCNGC | 6 cut(s) | 115, 118, 190, 193, 268, 314 |
| BmeT110I | CYCGRG | 1 cut(s) | 127 |
| BpiI | GAAGAC | 1 cut(s) | 154 |
| BpuEI | CTTGAG | 1 cut(s) | 59 |
| Bsa29I | ATCGAT | 1 cut(s) | 14 |
| BsaBI | GATNNNNATC | 1 cut(s) | 101 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 21, 51 |
| Bse8I | GATNNNNATC | 1 cut(s) | 101 |
| BseCI | ATCGAT | 1 cut(s) | 14 |
| BseJI | GATNNNNATC | 1 cut(s) | 101 |
| BseXI | GCAGC | 4 cut(s) | 125, 128, 200, 203 |
| BshFI | GGCC | 1 cut(s) | 343 |
| BshVI | ATCGAT | 1 cut(s) | 14 |
| BsiHKCI | CYCGRG | 1 cut(s) | 127 |
| BsmAI | GTCTC | 2 cut(s) | 53, 84 |
| BsmBI | CGTCTC | 1 cut(s) | 84 |
| BsnI | GGCC | 1 cut(s) | 343 |
| BsoBI | CYCGRG | 1 cut(s) | 127 |
| Bsp143I | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| BspACI | CCGC | 6 cut(s) | 156, 194, 254, 266, 312, 315 |
| BspANI | GGCC | 1 cut(s) | 343 |
| BspDI | ATCGAT | 1 cut(s) | 14 |
| BspPI | GGATC | 2 cut(s) | 264, 326 |
| BssMI | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstKTI | GATC | 5 cut(s) | 99, 105, 222, 259, 321 |
| BstMAI | GTCTC | 2 cut(s) | 53, 84 |
| BstMBI | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 197 |
| BstV1I | GCAGC | 4 cut(s) | 125, 128, 200, 203 |
| BstV2I | GAAGAC | 1 cut(s) | 154 |
| BstX2I | RGATCY | 1 cut(s) | 318 |
| BstYI | RGATCY | 1 cut(s) | 318 |
| Bsu15I | ATCGAT | 1 cut(s) | 14 |
| BsuRI | GGCC | 1 cut(s) | 343 |
| BsuTUI | ATCGAT | 1 cut(s) | 14 |
| ClaI | ATCGAT | 1 cut(s) | 14 |
| Csp6I | GTAC | 1 cut(s) | 141 |
| CviAII | CATG | 2 cut(s) | 169, 260 |
| CviJI | RGCY | 5 cut(s) | 73, 119, 200, 274, 343 |
| CviKI_1 | RGCY | 5 cut(s) | 73, 119, 200, 274, 343 |
| CviQI | GTAC | 1 cut(s) | 141 |
| DpnI | GATC | 5 cut(s) | 98, 104, 221, 258, 320 |
| DpnII | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| EciI | GGCGGA | 1 cut(s) | 269 |
| Eco88I | CYCGRG | 1 cut(s) | 127 |
| Esp3I | CGTCTC | 1 cut(s) | 84 |
| FaeI | CATG | 2 cut(s) | 172, 263 |
| FaiI | YATR | 3 cut(s) | 170, 203, 261 |
| FatI | CATG | 2 cut(s) | 168, 259 |
| FauI | CCCGC | 2 cut(s) | 149, 308 |
| Fnu4HI | GCNGC | 6 cut(s) | 114, 117, 189, 192, 267, 313 |
| Fsp4HI | GCNGC | 6 cut(s) | 114, 117, 189, 192, 267, 313 |
| FspBI | CTAG | 5 cut(s) | 179, 185, 213, 242, 285 |
| GluI | GCNGC | 6 cut(s) | 114, 117, 189, 192, 267, 313 |
| HaeIII | GGCC | 1 cut(s) | 343 |
| Hin1II | CATG | 2 cut(s) | 172, 263 |
| Hpy188I | TCNGA | 1 cut(s) | 136 |
| Hpy188III | TCNNGA | 5 cut(s) | 76, 100, 127, 285, 322 |
| HpyAV | CCTTC | 3 cut(s) | 42, 143, 340 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 197 |
| Hsp92II | CATG | 2 cut(s) | 172, 263 |
| Kzo9I | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| LpnPI | CCDG | 1 cut(s) | 235 |
| Lsp1109I | GCAGC | 4 cut(s) | 125, 128, 200, 203 |
| MaeI | CTAG | 5 cut(s) | 179, 185, 213, 242, 285 |
| MalI | GATC | 5 cut(s) | 98, 104, 221, 258, 320 |
| MboI | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| MboII | GAAGA | 3 cut(s) | 68, 154, 229 |
| MflI | RGATCY | 1 cut(s) | 318 |
| MmeI | TCCRAC | 1 cut(s) | 114 |
| MnlI | CCTC | 5 cut(s) | 47, 62, 123, 138, 224 |
| MseI | TTAA | 1 cut(s) | 346 |
| MspA1I | CMGCKG | 1 cut(s) | 194 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 197 |
| NdeII | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| NlaIII | CATG | 2 cut(s) | 172, 263 |
| PaeR7I | CTCGAG | 1 cut(s) | 127 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 51, 140 |
| PkrI | GCNGC | 6 cut(s) | 115, 118, 190, 193, 268, 314 |
| PsuI | RGATCY | 1 cut(s) | 318 |
| RsaI | GTAC | 1 cut(s) | 142 |
| RsaNI | GTAC | 1 cut(s) | 141 |
| SaqAI | TTAA | 1 cut(s) | 346 |
| SatI | GCNGC | 6 cut(s) | 114, 117, 189, 192, 267, 313 |
| Sau3AI | GATC | 5 cut(s) | 96, 102, 219, 256, 318 |
| SetI | ASST | 5 cut(s) | 34, 54, 75, 134, 154 |
| Sfr274I | CTCGAG | 1 cut(s) | 127 |
| SlaI | CTCGAG | 1 cut(s) | 127 |
| SmlI | CTYRAG | 2 cut(s) | 74, 127 |
| SmoI | CTYRAG | 2 cut(s) | 74, 127 |
| SsiI | CCGC | 6 cut(s) | 156, 194, 254, 266, 312, 315 |
| SspMI | CTAG | 5 cut(s) | 179, 185, 213, 242, 285 |
| TaqI | TCGA | 4 cut(s) | 14, 54, 99, 128 |
| TauI | GCSGC | 2 cut(s) | 269, 315 |
| Tru1I | TTAA | 1 cut(s) | 346 |
| Tru9I | TTAA | 1 cut(s) | 346 |
| TseI | GCWGC | 4 cut(s) | 113, 116, 188, 191 |
| XbaI | TCTAGA | 1 cut(s) | 284 |
| XhoI | CTCGAG | 1 cut(s) | 127 |
| XspI | CTAG | 5 cut(s) | 179, 185, 213, 242, 285 |