pre-mRNA-splicing factor CWC25 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44195 AT2G44200 |
| fragaria_vesca | FvH4_4g13451 |
| malus_domestica | MD04G1014200.v1.1 |
| prunus_persica | Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161200_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G161500_v2.0.a1 Prupe.1G162300_v2.0.a1 |
| pyrus_communis | pycom04g01100 |
| rosa_chinensis | RchiOBHm_Chr4g0414011 |
| rosa_laevigata | RLG00000008185 |
| rosa_multiflora | Rmu_sc0003264.1_g000022 Rmu_sc0006428.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00357930 |
| rosa_rugosa | Rorug04G0125000 |
| rosa_samantha | Rh4AG183500 Rh4BG183000 Rh4CG195500 Rh4DG178800 |
| rosa_wichuraiana | Rw4G015600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 129 |
| AciI | CCGC | 1 cut(s) | 49 |
| AclI | AACGTT | 1 cut(s) | 54 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcsI | RAATTY | 2 cut(s) | 122, 341 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 142 |
| AgsI | TTSAA | 2 cut(s) | 10, 231 |
| AjnI | CCWGG | 1 cut(s) | 283 |
| AluBI | AGCT | 2 cut(s) | 74, 275 |
| AluI | AGCT | 2 cut(s) | 74, 275 |
| Alw26I | GTCTC | 1 cut(s) | 307 |
| AlwI | GGATC | 1 cut(s) | 185 |
| AoxI | GGCC | 2 cut(s) | 144, 164 |
| ApoI | RAATTY | 2 cut(s) | 122, 341 |
| AspLEI | GCGC | 2 cut(s) | 131, 339 |
| BciT130I | CCWGG | 1 cut(s) | 285 |
| BciVI | GTATCC | 1 cut(s) | 56 |
| BcoDI | GTCTC | 1 cut(s) | 307 |
| BfaI | CTAG | 1 cut(s) | 200 |
| BfuI | GTATCC | 1 cut(s) | 56 |
| Bme1390I | CCNGG | 1 cut(s) | 285 |
| BmrFI | CCNGG | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 1 cut(s) | 158 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 170, 200 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 142 |
| Bse118I | RCCGGY | 1 cut(s) | 146 |
| BseBI | CCWGG | 1 cut(s) | 285 |
| BseDI | CCNNGG | 1 cut(s) | 158 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BseRI | GAGGAG | 2 cut(s) | 125, 175 |
| Bsh1236I | CGCG | 1 cut(s) | 129 |
| BshFI | GGCC | 2 cut(s) | 146, 166 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BsmAI | GTCTC | 1 cut(s) | 307 |
| BsnI | GGCC | 2 cut(s) | 146, 166 |
| Bsp143I | GATC | 2 cut(s) | 190, 259 |
| BspACI | CCGC | 1 cut(s) | 49 |
| BspANI | GGCC | 2 cut(s) | 146, 166 |
| BspFNI | CGCG | 1 cut(s) | 129 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BsrFI | RCCGGY | 1 cut(s) | 146 |
| BssAI | RCCGGY | 1 cut(s) | 146 |
| BssECI | CCNNGG | 1 cut(s) | 158 |
| BssMI | GATC | 2 cut(s) | 190, 259 |
| Bst2UI | CCWGG | 1 cut(s) | 285 |
| Bst4CI | ACNGT | 2 cut(s) | 456, 462 |
| BstC8I | GCNNGC | 1 cut(s) | 267 |
| BstFNI | CGCG | 1 cut(s) | 129 |
| BstHHI | GCGC | 2 cut(s) | 131, 339 |
| BstKTI | GATC | 2 cut(s) | 193, 262 |
| BstMAI | GTCTC | 1 cut(s) | 307 |
| BstMBI | GATC | 2 cut(s) | 190, 259 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 379 |
| BstNI | CCWGG | 1 cut(s) | 285 |
| BstSCI | CCNGG | 1 cut(s) | 283 |
| BstUI | CGCG | 1 cut(s) | 129 |
| BsuI | GTATCC | 1 cut(s) | 56 |
| BsuRI | GGCC | 2 cut(s) | 146, 166 |
| Cac8I | GCNNGC | 1 cut(s) | 267 |
| CfoI | GCGC | 2 cut(s) | 131, 339 |
| Cfr10I | RCCGGY | 1 cut(s) | 146 |
| CviAII | CATG | 2 cut(s) | 236, 425 |
| CviJI | RGCY | 5 cut(s) | 74, 92, 146, 166, 275 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 92, 146, 166, 275 |
| DpnI | GATC | 2 cut(s) | 192, 261 |
| DpnII | GATC | 2 cut(s) | 190, 259 |
| EcoRII | CCWGG | 1 cut(s) | 283 |
| FaeI | CATG | 2 cut(s) | 239, 428 |
| FaiI | YATR | 5 cut(s) | 36, 67, 189, 237, 426 |
| FatI | CATG | 2 cut(s) | 235, 424 |
| FspBI | CTAG | 1 cut(s) | 200 |
| GlaI | GCGC | 2 cut(s) | 130, 338 |
| HaeIII | GGCC | 2 cut(s) | 146, 166 |
| HapII | CCGG | 1 cut(s) | 147 |
| HhaI | GCGC | 2 cut(s) | 131, 339 |
| Hin1II | CATG | 2 cut(s) | 239, 428 |
| Hin6I | GCGC | 2 cut(s) | 129, 337 |
| HinP1I | GCGC | 2 cut(s) | 129, 337 |
| HinfI | GANTC | 3 cut(s) | 253, 280, 329 |
| HpaII | CCGG | 1 cut(s) | 147 |
| Hpy166II | GTNNAC | 1 cut(s) | 452 |
| Hpy188I | TCNGA | 5 cut(s) | 18, 121, 159, 252, 352 |
| Hpy188III | TCNNGA | 4 cut(s) | 194, 231, 257, 391 |
| Hpy8I | GTNNAC | 1 cut(s) | 452 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 2 cut(s) | 456, 462 |
| HpyCH4IV | ACGT | 1 cut(s) | 54 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 379 |
| HpySE526I | ACGT | 1 cut(s) | 54 |
| Hsp92II | CATG | 2 cut(s) | 239, 428 |
| HspAI | GCGC | 2 cut(s) | 129, 337 |
| Kzo9I | GATC | 2 cut(s) | 190, 259 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| MaeI | CTAG | 1 cut(s) | 200 |
| MaeII | ACGT | 1 cut(s) | 54 |
| MaeIII | GTNAC | 1 cut(s) | 456 |
| MalI | GATC | 2 cut(s) | 192, 261 |
| MboI | GATC | 2 cut(s) | 190, 259 |
| MboII | GAAGA | 1 cut(s) | 436 |
| MluCI | AATT | 2 cut(s) | 122, 341 |
| MmeI | TCCRAC | 1 cut(s) | 375 |
| MnlI | CCTC | 3 cut(s) | 103, 153, 156 |
| MslI | CAYNNNNRTG | 1 cut(s) | 425 |
| MspI | CCGG | 1 cut(s) | 147 |
| MspR9I | CCNGG | 1 cut(s) | 285 |
| MvaI | CCWGG | 1 cut(s) | 285 |
| MvnI | CGCG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 379 |
| NdeII | GATC | 2 cut(s) | 190, 259 |
| NlaIII | CATG | 2 cut(s) | 239, 428 |
| NmeAIII | GCCGAG | 1 cut(s) | 118 |
| PfeI | GAWTC | 3 cut(s) | 253, 280, 329 |
| Psp1406I | AACGTT | 1 cut(s) | 54 |
| Psp6I | CCWGG | 1 cut(s) | 283 |
| PspGI | CCWGG | 1 cut(s) | 283 |
| RseI | CAYNNNNRTG | 1 cut(s) | 425 |
| Sau3AI | GATC | 2 cut(s) | 190, 259 |
| ScrFI | CCNGG | 1 cut(s) | 285 |
| SetI | ASST | 3 cut(s) | 57, 76, 277 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 425 |
| Sse9I | AATT | 2 cut(s) | 122, 341 |
| SsiI | CCGC | 1 cut(s) | 49 |
| SspMI | CTAG | 1 cut(s) | 200 |
| StyD4I | CCNGG | 1 cut(s) | 283 |
| TaaI | ACNGT | 2 cut(s) | 456, 462 |
| TaiI | ACGT | 1 cut(s) | 57 |
| TasI | AATT | 2 cut(s) | 122, 341 |
| TfiI | GAWTC | 3 cut(s) | 253, 280, 329 |
| TspDTI | ATGAA | 1 cut(s) | 413 |
| XapI | RAATTY | 2 cut(s) | 122, 341 |
| XspI | CTAG | 1 cut(s) | 200 |